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Supervisor: Dr. Rania El-Gohary Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman Ahmed El-Sayed Rana Abdelhaleem Youssef Essam Sara Roushdy Eslam Shaaban Ahmed Adel The seasonal fluctations of tomato insect pests on two cultivars during two seasons

Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

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Page 1: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Supervisor:Dr. Rania El-GoharyDr. Ibrahaim fathy

Team Leader: Jihen Amara

Members:Kareem Soliman Ahmed El-Sayed

Rana AbdelhaleemYoussef EssamSara Roushdy

Eslam ShaabanAhmed Adel

The seasonal fluctations of tomato insect pests on two cultivars during

two seasons

Page 2: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Agenda ● Problem definit ion

● Project Object ives

● Data Planning

● Data Collect ion

● Data Quality

● Data Descript ion

• Data Integrat ion

• Developed Ontology

• Data Analysis - Correlat ion

• Correlat ion Visualizat ion

• Conclusion

• Recommendations for Future work

Page 3: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Problem Definition

Page 4: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Project Objectives & Aims● Ident ifying based on the fluctuat ions the opt imum cult ivars that has the least

numbers of insects pests

● Collaborat ion between Biodiversity Students and Computer Science Students

● Following the Data Management Life cycle steps

● Applicat ion of the covered materials of the Summer School

Page 5: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Life Cycle

● The data life cycle consists of eight main phases

● All phases were accomplished throughout the project

Page 6: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Planning

● What Data will be Produced?

● How will the Data be Documented and Described?

● What are the plans for data sharing and access after submission of the thesis?

● What are the plans for long-term archiving of the digital data supporting the thesis?

Page 7: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data collection Methodology

● Tomato seedlings were sown on 4 April, 2012 and 23 March, 2013.

● The different stages of the previously mentioned insect pests were counted weekly on 60 tomato leaflets.

● Counts were recorded weekly during the period from 8 May to 10 July, 2013 and during 23 April to 2 July, 2013

Page 8: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Quality - Assurance

● Four steps of Data Quality

● The six Key Data quality Dimensions

● Data Quality Rules : Validity and Completeness are fulfilled within the data after its pre-processing which achieved the data Assurance.

Page 9: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Quality - Steps

Data Profiling Data Quality Rules Resolve DQ Issues Monitor and Control

Page 10: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Profiling- Step 1

Page 11: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Profiling- Step 1

Page 12: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Profiling- Step 1

Page 13: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Profiling- Step 1

Page 14: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Quality - Steps

Data Profiling Data Quality Rules Resolve DQ Issues Monitor and

Control

Page 15: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Quality Rules- Step 2

Accuracy Validity Timeliness

ConsistencyUniquenessCompleteness

Page 16: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Quality - Steps

Data Profiling Data Quality Rules

Resolve DQ Issues

Monitor and Control

Page 17: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Resolving DQ issues- Step 3

Accuracy Validity Timeliness

ConsistencyUniquenessCompleteness

Re-formated Lang & Sep.

Date

Put average

Page 18: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Quality - Steps

Data Profiling Data Quality Rules

Resolve DQ Issues

Monitor and Control

Page 19: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Description

● Data is represented in two separate excel spreadsheets consists of the reading of the fluctuations

● Fluctuations are taken weekly for each of the four kinds of insects pests ( B. tabaci, Aphids, E. decipiens, Tuta absoluta ) on leaflets of 2 types of tomatoes ( hybrid super and crystal HYB )

● The data itself is the actual number of insect pests on the leaflets collected by human observation.

Page 20: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data of summer 2012

Data of summer 2013

Page 21: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Integration

Page 22: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Integration

Page 23: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Semantic Data Integration (Ontology)

Page 24: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Semantic Data Integration (Ontology)

Page 25: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Semantic Data Integration (Ontology)

Page 26: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Analysis - Correlation2012

T1

Page 27: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Analysis - Correlation2012

T2

Page 28: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Analysis - Correlation2013

T1

Page 29: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Data Analysis - Correlation2013

T2

Page 30: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Correlation Visualization

Page 31: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam
Page 32: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam
Page 33: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam
Page 34: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Conclusion

● Cultivar 2 has less insect infection therefore it is more defensive Therefore it is more recommended to be cultivated than cultivar 1

● There is a correlation between the increase of the B. tabaci and aphids pests

● A good opportunity for colllaboration between biodiversity and computer science students

Page 35: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Recommendations for Future work ● Focus on the insects enter relationships and climate change

● Focus on the correlation between the date of planting and the number of pests

● More studies has to be conducted to predict any epidemic occurrences

● The effect of the increasing of the B. tabaci and Aphids on the actual crop production

Page 36: Supervisor: The seasonal fluctations Team Leader: of ...€¦ · Dr. Ibrahaim fathy Team Leader: Jihen Amara Members: Kareem Soliman . Ahmed El-Sayed. Rana Abdelhaleem. Youssef Essam

Thank You