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Split-gene system for hybrid wheat seed production Katja Kempe, Myroslava Rubtsova, and Mario Gils 1,2 Leibniz Institute of Plant Genetics and Crop Plant Research, D-06466 Stadt Seeland, Germany Edited by W. James Peacock, Commonwealth Scientific and Industrial Research Organisation, Canberra, ACT, Australia, and approved April 17, 2014 (received for review February 18, 2014) Hybrid wheat plants are superior in yield and growth character- istics compared with their homozygous parents. The commercial production of wheat hybrids is difficult because of the inbreeding nature of wheat and the lack of a practical fertility control that enforces outcrossing. We describe a hybrid wheat system that relies on the expression of a phytotoxic barnase and provides for male sterility. The barnase coding information is divided and distributed at two loci that are located on allelic positions of the host chromosome and are therefore linked in repulsion.Func- tional complementation of the loci is achieved through coexpres- sion of the barnase fragments and intein-mediated ligation of the barnase protein fragments. This system allows for growth and maintenance of male-sterile female crossing partners, whereas the hybrids are fertile. The technology does not require fertility restorers and is based solely on the genetic modification of the female crossing partner. hybrid wheat breeding | split-gene approach | site-specific recombination | intein-mediated protein splicing H ybrids often display increased yield, enhanced yield stability, and improved abiotic and biotic stress resistance that result from heterosis (hybrid vigor) (1). However, hybrid seeds cannot be saved without a significant loss in performance, a fact that protects the intellectual property of seed companies. The bene- fits of hybrid systems are countered by the increased seed pro- duction costs that result from complex breeding schemes. Therefore, there is a strong incentive to develop systems that facilitate hybrid production, particularly in crops where hybrid production has been impossible or difficult to develop. Hybrid plants are produced by cross-pollination of genetically diverse parental lines. Several prerequisites must be fulfilled for commercial hybrid seed production. First, for self-pollinating (autogamous) species, self-pollination of the femalemust be precluded to ensure that the plant will only be cross-pollinated by the chosen crossing partner (i.e., the maleline) (2). Second, because male-sterile plants cannot be multiplied by selfing, technical solutions must be available for the multiplication of the sterile crossing partner (3). Third, in crops for which seeds are the harvest product (e.g., all cereals), sterility must be overcome in the hybrid generation to obtain a full yield in the commer- cialized product (2). The most efficient way to promote cross-pollination in bi- sexual plants is male sterility, which can be achieved by various means. In maize, which is the worlds most valuable hybrid, the female crossing partner can be sterilized by manual detasselling (removal of the anthers) (4); however, the detasselling technique cannot be applied to crop plants that do not have a physical separation of the male and female flower parts. The most well- established genetic system is cytoplasmic male sterility (CMS), which is based on mutated mitochondrial DNA (5). The effect of the male sterility-inducing cytoplasm can be neutralized by fer- tility restorers (i.e., nuclear genes that are specific to each CMS system). CMS is reasonable for hybrid breeding only if mutants for cytoplasmic sterility and fertility restoration are available in a given crop, which renders CMS a relatively inflexible system. The introgression of CMS mutants is complex, because the dif- ferent genetic components have to be discovered and brought together separately. CMS is functional in important cereals, such as rice and rye; however, in hexaploid wheat, CMS is difficult to develop, complex to maintain, and only marginally reliable. In particular, reliable restorer genes are not yet available, making F 1 fertility restoration difficult. The lack of availability of restorer genes has been a major factor in limiting the application of CMS to wheat (6, 7). Moreover, CMS sys- tems are sensitive to environmental factors, such as tempera- ture and photoperiod (8). As a result, no wheat CMS system with more than a regional application is currently used in hy- brid seed production (9). All of the hybrid cultivars that are registered for the European wheat market were produced by sterilizing the pollen recipient through the application of a chemical hybridization agent (CHA) (gametocide) (10). The plant growth regulator Croisor 100 (sintofen; formerly Dupont-Hybrinova, Saaten Union Recher- che) is currently the only wheat CHA that is used for commercial European hybrid wheat production (www.hybridwheat.net). Ster- ile females are grown in alternating stripes in close proximity to untreated plants that display good pollen shedding properties, and the hybrid seed is harvested from the females after cross- pollination (2, 9). However, the commercial deployment of CHAs is hampered by several problems, including compromised seed production in wheat females that are treated with CHAs (11) and narrow application windows attributable to prevailing environmental factors, such as rain, wind, and heat (10, 12). Thus, the use of CHAs bears a substantial financial risk. There have been major efforts to deploy transgenic technology for hybrid systems (2); however, Seedlink from Bayer Crop- Science is the only commercialized transgenic male-sterility sys- tem. The Seedlink method relies on the expression of a cytotoxic Significance Global food security demands the development of new tech- nologies to increase and secure cereal production on finite ar- able land without increasing water and fertilizer use. Although the use of heterosis through hybrid breeding has produced tremendous economic benefits in worldwide crop production, less than 1% of the global wheat area is planted with hybrids. One of the greatest bottlenecks in breeding hybrid wheat is the lack of an efficient sterility system to block self-pollination. This report describes a recessive system for pollination control in wheat. We demonstrate the implementation and feasibility of the system for generation and maintenance of the male- sterile parent, hybrid seed production and full restoration of fertility in the hybrid wheat seed. Author contributions: K.K. and M.G. designed research; K.K. and M.R. performed re- search; K.K., M.R., and M.G. analyzed data; and M.G. wrote the paper. Conflict of interest statement: The cooperation partner Nordsaat Saatzucht GmbH holds a patent that protects key elements of the split-gene system (Eur Patent Publ EP2294204). This article is a PNAS Direct Submission. See Commentary on page 9024. 1 Present address: Nordsaat Saatzucht GmbH, D-38895 Langenstein, Germany. 2 To whom correspondence should be addressed. E-mail: [email protected]. This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10. 1073/pnas.1402836111/-/DCSupplemental. www.pnas.org/cgi/doi/10.1073/pnas.1402836111 PNAS | June 24, 2014 | vol. 111 | no. 25 | 90979102 AGRICULTURAL SCIENCES SEE COMMENTARY Downloaded by guest on July 26, 2020

Split-gene system for hybrid wheat seed productionSplit-gene system for hybrid wheat seed production Katja Kempe, Myroslava Rubtsova, and Mario Gils1,2 Leibniz Institute of Plant Genetics

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Page 1: Split-gene system for hybrid wheat seed productionSplit-gene system for hybrid wheat seed production Katja Kempe, Myroslava Rubtsova, and Mario Gils1,2 Leibniz Institute of Plant Genetics

Split-gene system for hybrid wheat seed productionKatja Kempe, Myroslava Rubtsova, and Mario Gils1,2

Leibniz Institute of Plant Genetics and Crop Plant Research, D-06466 Stadt Seeland, Germany

Edited by W. James Peacock, Commonwealth Scientific and Industrial Research Organisation, Canberra, ACT, Australia, and approved April 17, 2014 (receivedfor review February 18, 2014)

Hybrid wheat plants are superior in yield and growth character-istics compared with their homozygous parents. The commercialproduction of wheat hybrids is difficult because of the inbreedingnature of wheat and the lack of a practical fertility control thatenforces outcrossing. We describe a hybrid wheat system thatrelies on the expression of a phytotoxic barnase and provides formale sterility. The barnase coding information is divided anddistributed at two loci that are located on allelic positions of thehost chromosome and are therefore “linked in repulsion.” Func-tional complementation of the loci is achieved through coexpres-sion of the barnase fragments and intein-mediated ligation of thebarnase protein fragments. This system allows for growth andmaintenance of male-sterile female crossing partners, whereasthe hybrids are fertile. The technology does not require fertilityrestorers and is based solely on the genetic modification of thefemale crossing partner.

hybrid wheat breeding | split-gene approach | site-specific recombination |intein-mediated protein splicing

Hybrids often display increased yield, enhanced yield stability,and improved abiotic and biotic stress resistance that result

from heterosis (hybrid vigor) (1). However, hybrid seeds cannotbe saved without a significant loss in performance, a fact thatprotects the intellectual property of seed companies. The bene-fits of hybrid systems are countered by the increased seed pro-duction costs that result from complex breeding schemes. Therefore,there is a strong incentive to develop systems that facilitate hybridproduction, particularly in crops where hybrid production hasbeen impossible or difficult to develop.Hybrid plants are produced by cross-pollination of genetically

diverse parental lines. Several prerequisites must be fulfilled forcommercial hybrid seed production. First, for self-pollinating(autogamous) species, self-pollination of the “female” must beprecluded to ensure that the plant will only be cross-pollinatedby the chosen crossing partner (i.e., the “male” line) (2). Second,because male-sterile plants cannot be multiplied by selfing,technical solutions must be available for the multiplication of thesterile crossing partner (3). Third, in crops for which seeds arethe harvest product (e.g., all cereals), sterility must be overcomein the hybrid generation to obtain a full yield in the commer-cialized product (2).The most efficient way to promote cross-pollination in bi-

sexual plants is male sterility, which can be achieved by variousmeans. In maize, which is the world’s most valuable hybrid, thefemale crossing partner can be sterilized by manual detasselling(removal of the anthers) (4); however, the detasselling techniquecannot be applied to crop plants that do not have a physicalseparation of the male and female flower parts. The most well-established genetic system is cytoplasmic male sterility (CMS),which is based on mutated mitochondrial DNA (5). The effect ofthe male sterility-inducing cytoplasm can be neutralized by fer-tility restorers (i.e., nuclear genes that are specific to each CMSsystem). CMS is reasonable for hybrid breeding only if mutantsfor cytoplasmic sterility and fertility restoration are available ina given crop, which renders CMS a relatively inflexible system.The introgression of CMS mutants is complex, because the dif-ferent genetic components have to be discovered and brought

together separately. CMS is functional in important cereals,such as rice and rye; however, in hexaploid wheat, CMS isdifficult to develop, complex to maintain, and only marginallyreliable. In particular, reliable restorer genes are not yetavailable, making F1 fertility restoration difficult. The lack ofavailability of restorer genes has been a major factor in limitingthe application of CMS to wheat (6, 7). Moreover, CMS sys-tems are sensitive to environmental factors, such as tempera-ture and photoperiod (8). As a result, no wheat CMS systemwith more than a regional application is currently used in hy-brid seed production (9).All of the hybrid cultivars that are registered for the European

wheat market were produced by sterilizing the pollen recipientthrough the application of a chemical hybridization agent (CHA)(gametocide) (10). The plant growth regulator Croisor 100(sintofen; formerly Dupont-Hybrinova, Saaten Union Recher-che) is currently the only wheat CHA that is used for commercialEuropean hybrid wheat production (www.hybridwheat.net). Ster-ile females are grown in alternating stripes in close proximity tountreated plants that display good pollen shedding properties,and the hybrid seed is harvested from the females after cross-pollination (2, 9). However, the commercial deployment ofCHAs is hampered by several problems, including compromisedseed production in wheat females that are treated with CHAs(11) and narrow application windows attributable to prevailingenvironmental factors, such as rain, wind, and heat (10, 12). Thus,the use of CHAs bears a substantial financial risk.There have been major efforts to deploy transgenic technology

for hybrid systems (2); however, Seedlink from Bayer Crop-Science is the only commercialized transgenic male-sterility sys-tem. The Seedlink method relies on the expression of a cytotoxic

Significance

Global food security demands the development of new tech-nologies to increase and secure cereal production on finite ar-able land without increasing water and fertilizer use. Althoughthe use of heterosis through hybrid breeding has producedtremendous economic benefits in worldwide crop production,less than 1% of the global wheat area is planted with hybrids.One of the greatest bottlenecks in breeding hybrid wheat isthe lack of an efficient sterility system to block self-pollination.This report describes a recessive system for pollination controlin wheat. We demonstrate the implementation and feasibilityof the system for generation and maintenance of the male-sterile parent, hybrid seed production and full restoration offertility in the hybrid wheat seed.

Author contributions: K.K. and M.G. designed research; K.K. and M.R. performed re-search; K.K., M.R., and M.G. analyzed data; and M.G. wrote the paper.

Conflict of interest statement: The cooperation partner Nordsaat Saatzucht GmbH holdsa patent that protects key elements of the split-gene system (Eur Patent Publ EP2294204).

This article is a PNAS Direct Submission.

See Commentary on page 9024.1Present address: Nordsaat Saatzucht GmbH, D-38895 Langenstein, Germany.2To whom correspondence should be addressed. E-mail: [email protected].

This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1402836111/-/DCSupplemental.

www.pnas.org/cgi/doi/10.1073/pnas.1402836111 PNAS | June 24, 2014 | vol. 111 | no. 25 | 9097–9102

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ribonuclease from Bacillus amyloliquefaciens (barnase) in themale reproductive tissue tapetum, which is essential for pollendevelopment (13). The male-sterile line is maintained by back-crossing with a nontransgenic plant, which results in a mixedpopulation comprising 50% sterile plants. By linking glufosinateresistance (LibertyLink) to the barnase transgene, male-sterileplants can be selected. Fertility restoration in the F1 hybridprogeny results from the expression of the barstar gene, which isdelivered by the father. Barstar counteracts barnase by forminga specific and stable one-to-one protein complex (14). Althoughthis method is used successfully for hybrid canola production, thedominant dual-component system requires the expression oftransgenes in each crossing partner, which involves additionalbreeding efforts.Here, we describe a recessive “split-gene” system that has the

potential to overcome several difficulties associated with thesystems that are currently used. Our system relies on the ex-pression of a barnase gene that is encoded by two nonoverlappingsequences at complementary genetic loci (15). Following trans-lation, the barnase fragments are assembled into an active phy-totoxic enzyme via an autocatalytic process of intein-mediatedtrans-splicing (16, 17). The tapetum is destroyed after the phy-totoxic barnase is formed, which prevents the formation of viablepollen. Both barnase gene fragments reside at identical chro-mosomal positions on physically distinct homologous chromo-somes (“isoloci”). These partial genes functionally mimic a pairof recessive alleles because a plant will produce active barnaseand exhibit a male-sterile phenotype only as a “heterozygote”(i.e., when the plant carries both complementary “alleles”). Theseplants can then be used as the female (male-sterile) crossingpartner in hybrid breeding. During meiosis, the members ofa pair of barnase loci segregate into separate gametes. Conse-quently, the hybrid progeny inherit only one of the comple-mentary fragments after pollination, so they remain fertile. Thisgenetic design facilitates a mode of fertility restoration thatshould be robust. Moreover, because only the female crossingpartner is genetically manipulated, this hybridization system ismore flexible to use than are systems that also require a geneti-cally modified male parent.Wheat is one of the most important staple crops. Research has

underscored that the implementation of hybrid wheat breedinghas the potential to achieve breakthrough increases in yield, yieldstability, and sturdiness against biotic and abiotic stresses. Re-cent large-scale phenotyping involving extensive collections ofinbred lines and hybrids revealed that hybrids were superior to

the mean of their parents for grain yield, susceptibility to frost,leaf rust, and Septoria tritici blotch (18, 19). A consistently highergrain yield stability for wheat hybrids compared with lines wasobserved in multilocation field trials (20). The yield benefits andthe robustness of hybrids may provide additional benefits relatedto the future climatic changes that are predicted to impair cropproduction (21). Therefore, the development of technologiesthat enable the benefits of heterosis to be captured in a majorcrop, such as wheat, is of paramount importance.

ResultsDescription of the Vector Constructs and the Experimental Strategy.The cloning of the barnase-containing “provectors” used in thisstudy has been described previously (22). The vectors that con-tain nonoverlapping fragments of a barnase gene from Bacillusamyloliquefaciens are fused to the N- and C-terminal sequencesof an intein that is derived from the Synechocystis sp. DnaBhelicase gene (Fig. 1A). For tapetum-specific expression, thebarnase–intein fusion is controlled by the rice osg6B promoter(23). Upon translation, the inteins covalently fuse the barnasefragments in an autocatalytic reaction to produce an intact cy-totoxic barnase protein (Fig. 1D), which leads to male sterility.The localization of both barnase gene fragments to the same

locus on homologous host chromosomes is achieved by trans-forming plants with a construct that contains both genetic ele-ments (the provector). Next, the primary prolocus is derivatizedby using site-specific deletions. For this purpose, the provectorscontain attB and attP recombination sites to serve as targets forphiC31 integrase (a site-specific recombinase) (24, 25). Site-specific recombination is induced by crossing a plant that carriesthe prolocus with a plant that carries the pICH13130 locus as theintegrase source (Fig. 1B) (26). Site-specific deletions may leadto two different loci that contain only the N- or the C-terminalfragment of the barnase (hereafter referred to as derivative loci“A1” and “A2”; Fig. 1C). In the case of only an N-terminalfragment, a hybrid attL sequence is produced via a reaction be-tween attB and attP2; in the case of only a C-terminal fragment,a reaction between attP1 and attB creates a hybrid attR sequence.attL and attR are not substrates for the phiC31 integrase inplants. Consequently, the described phiC31 integrase-mediatedrecombination reactions are irreversible, and the two reactionsare mutually exclusive.Fig. 2 describes the different experimental steps required to

develop the system including the predicted genotypes andphenotypes.

nosphiC31Pubi NLS

ocsBar-NPtap S IntNPSKattP1 attB

ocs PtapIntCBar-C S UBQPubi nosHPT IIattP2

Pro-vector

pICH13130

A

B

LB

LB

RB

RB

Transcription and translationBar-N IntN Bar-CIntCBarnase precursor proteins

(inactive)

ocs PtapIntCBar-C S UBQPubi nosHPT IIattP2

A2

ocsBar-NPtap S IntNPSKattP1 attL

A1attR

C

LB

RB

RB

LB

(inactive)

Bar-N IntN

Bar-CIntC

Intein-mediated protein (trans-)splicing

Bar-N Bar-CMature barnase protein (active)D

Fig. 1. Vector constructs used in this study. (A andB) The genetic structure of the barnase expressionvector (“pro-vector”) (A) and the phiC31-integrase-expression vector (B). The provector harbors attP andattB sequences that serve as targets for the site-specific recombinase phiC31. Note that only theT-DNA part of the vectors is illustrated (not drawnto scale). (C ) Phage phiC31 integrase-mediatedsite-specific recombination results in the derivativeloci A1 and A2. Recombination results in the hybridproducts attR and attL. (D) A schematic illustrationof the assembly of active barnase cytotoxin via theintein-mediated trans-splicing of two precursormolecules. Bar-N and Bar-C, N- and C-terminal genefragments of the Bacillus amyloliquefaciens barnasegene; HPTII, hygromycin phosphotransferase; IntNand IntC, N- and C-terminal intein sequences fromthe DnaB gene of Synechocystis sp.; LB and RB,T-DNA left and right borders; ocs, octopine synthaseterminator; NLS, SV40 T antigen nuclear localization signal (amino acids PKKKRKV); nos, nopaline synthase terminator; ocs, octopine synthase terminator;phiC31, phage phiC31 recombinase coding sequence; PSK, intron PSK7-i3 from Petunia hybrida; Ptap, tapetum-specific osg6B promoter from rice (23); Pubi,maize ubiquitin 1 promoter; S, (GGGGS)3 flexible peptide linker; UBQ, intron UBQ10-i1 from Arabidopsis thaliana.

9098 | www.pnas.org/cgi/doi/10.1073/pnas.1402836111 Kempe et al.

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Generation of the A1 and A2 Loci. A total of 180 sterile primarytransformants (T0) carrying the prolocus were produced by ge-netic transformation and were backcrossed to wild-type plants(Fig. 2A). More than 95% of the backcrosses led to vital seeds,which demonstrates that sterility was restricted to the malegametes and did not affect fertility in general. For furtheranalysis, we preferentially selected lines that carried a singlebarnase locus (indicated by a 1:1 segregation of transgenic sterilevs. nontransgenic fertile T1 plants; assayed using fertility assaysand Southern blot analyses).To induce deletions at the prolocus, 96 male-sterile T1 plants

(derived from 46 independent T0 plants) were crossed withdoubled-haploid (DH) plants that expressed an active phiC31integrase recombinase (Fig. 2A). The genotypes of 862 fertile T2plants were screened for the occurrence of the A1 and A2 loci byperforming PCRs that amplified the barnase-intein regions of theA1 and A2 loci (Table S1 and Fig. S1). As expected, all plants

carried the integrase transgene. A total of 56% (482 plants)harbored the barnase locus; however, the loss of the barnaselocus through segregation was expected for a proportion of theT2 plants because the T1 generation is hemizygous for the targetloci. To confirm the site-specific recombination, PCRs wereconducted to amplify the “excision empty donor site” of thederivative A1 and A2 loci, including the corresponding hybridsequences attL or attR (Fig. S1). The presence of attL and attRwas confirmed by sequencing the PCR products. A total of 97%(467 plants) of the cotransgenic T2 plants harbored recombinantloci. Of these plants, 78% (365 plants) carried both A1 and A2

loci. We identified 102 T2 plants (derived from 24 independentlines) that carried only an A1 or A2 locus. All of these hemi-zygous segregants displayed a fertile phenotype.Thus, we conclude that the switch from a sterile phenotype in

the T0 and T1 plants into a fertile phenotype in the T2 plants

A1A2

phiC31

T0

T1

BC

pro-locus

A1A2pro-locus X

X21 A11

A2A1 A1A1

A1A2 phiC31

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50% heterozygous(male-sterile)

A2

S

ST2

T3 S

or

SA1 A2

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A1 A2

T4hybrid F1(fertile)

femaleparent

A1 A2

A1 A1 A2X

A2

(male-sterile)

A B

C

A A A

Fig. 2. Experimental design for the production of hybrid seed. Genotypes that have an expected male-sterile phenotype are symbolized in blue. (A) Thegeneration of the male-sterile parent for hybrid breeding. After transforming the provector, the primary transformants (T0) are expected to be male-sterile asa result of barnase expression. To ensure that the phenotype is stable, and to create more target plants for recombination, the T0 plants are backcrossed. Inthe event of a single-copy integration of the prolocus, the T1 progeny are expected to segregate so that ∼50% of the plants are male-sterile (transgenic) and50% are fertile (null-segregants). In the next step, the sterile T1 plants are crossed with plants that express a phiC31 site-specific recombinase (encoded bypICH13130). In the developing T2 plants, the integrase may catalyze the site-specific deletions between the attP and attB sites of the prolocus. Two alternativereactions can lead to the deletion of either the C-terminal or the N-terminal part of the locus, which results in the formation of the derivative loci A1 or A2.The derivative loci will naturally reside at exactly the same genetic position on two homologous chromosomes (because they originate from one prolocus).Depending on the time point at which recombination occurs, the F2 plants may be genetic chimera that contain recombined and nonrecombined sectors.Plants carrying only A1 or A2 should be fertile, because no complete barnase protein can be produced. The A1 and A2 lines are then crossed (either as T3 plantsor T4 plants after one round of self-pollination), and a portion of the resulting progeny is expected to carry both the A1 and A2 loci (25% of the progeny ifboth parents are hemizygous for A1 and A2, and 50% or 100% of the progeny if one or both parents are homozygous for A1 or A2). These heterozygousgenetic segregants are expected to be male-sterile because of the coexpression of barnase from the A1 and A2 loci. (B) A strategy for maintaining the male-sterile line. Reproduction of the heterozygous male-sterile line A1A2 can be accomplished by crossing such lines with a homozygous fertile “maintainer” line,A1A1 or A2A2. The progeny of this cross may segregate the seeds so that 50% will have the genotype A1A2 (like the female parent) and, depending on themale parental line that was used, 50% will have the genotype A1A1 or A2A2. (C) Hybrid seed production. Male-sterile plants with the genotype A1A2 are usedas the female crossing partners for hybrid seed production. The allelic position of the complementary barnase fragments enforces 100% segregation duringmeiosis. This results in male fertility and seed set in the hybrid progeny, because all segregants carry only an inactive barnase fragment (either A1 or A2). BC,backcrossing step; S, self-pollination step.

Kempe et al. PNAS | June 24, 2014 | vol. 111 | no. 25 | 9099

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invariably correlates with the loss of an N- or C-terminalbarnase fragment.Four of the lines (3493, 7031, 7335, and 9855) segregated both

A1 and A2 progeny plants (Table S1). We did not observe anysectors of sterility and fertility or recombinant and nonrecom-binant sectors in the T2 plants. This result indicates that therecombination events occurred early in the developing embryosafter the T1 plants were hybridized with the integrase line, whichis consistent with previous results (26).

Generation and Propagation of the Male-Sterile Female Line 7031-A1A2. Fertile T3 plants that carried isolocus A1 were crossedwith fertile T3 plants carrying isolocus A2. The resulting T4progeny were analyzed for the presence of the isoloci and forfertility. Whereas heterozygous segregants carrying both A1 andA2 from lines 3493, 7335, and 9855 displayed male fertility orpartial male sterility (Fig. S2G–I), crosses of 7031-A1 with 7031-A2led to progeny populations that displayed the expected phe-notype without exception. Specifically, all heterozygous plantswere male-sterile (Fig. S2 D–F), whereas 7031-A1, 7031-A2, andthe null-segregants were male-fertile. Thus, line 7031 was chosento develop the system. We selected the parental 7031-A1 and7031-A2 T3 plants from the successful crosses and propagatedthem by selfing (resulting in T4 progeny; Fig. 2A). The resultinglines (hemizygous and homozygous) were crossed: all 190 of theresulting male-sterile progeny plants from the 7031-A1 × 7031-A2crosses contained both A1 and A2 loci, and the male-fertileplants lacked either one or both loci (Table 1 and Fig. 3A). Thesedata demonstrate the functional complementation of the split-barnase loci A1 and A2 in heterozygous wheat plants.To maintain heterozygous male-sterile plants, crosses were

performed between 10 male-sterile heterozygous A1A2 segre-gants and plants that carried only the A1 locus (according to Fig.2B). Among the 79 genetic segregants that were produced, 41were heterozygous for the A1 and A2 loci and showed malesterility, and 38 carried only the A1 locus and were fertile.Control crosses with T2 plants carrying only the N-terminal loci(A1 × A1) or the C-terminal loci (A2 × A2) resulted only in fertileprogeny. The aforementioned crosses were performed re-ciprocally, and no differences in the phenotypes of the progenywere detected.

Production of Hybrid Seed and the Restoration of Fertility. Male-sterile heterozygous plants from line 7031 were crossed withwild-type plants (Fig. 2C). This step corresponds to commercialhybrid seed production. A total of 849 progeny plants wereobtained (hereafter designated as the “hybrid F1” generation).Among these plants, 98.5% displayed the expected hybrid ge-notype. Of these, 411 plants (49%) carried the A1 locus exclu-sively, and 425 plants (51%) carried the A2 locus exclusively. Asdemonstrated by pollen analyses and visual inspections, theseplants were completely fertile without exception (Fig. 3B). Boththe A1 and A2 loci were detected in 13 F1 plants (1.5%), whereasno plant lacked both the A1 and A2 loci.

DiscussionIn this study, we established a transgenic pollination controlsystem for the generation of hybrid wheat seed. This proof-of-principle study was performed under greenhouse conditions fora noncommercial, prototype version of the split-gene system.Nevertheless, to our knowledge, this report is the only one todetail the successful application of transgenic technology forhybrid seed production in wheat.Our data suggest that the complementary barnase fragments

are suitable for producing male sterility in wheat plants, re-gardless of whether they are located on one transfer (T)-DNA(prolocus, or “cis”-configuration) or whether they are in an al-lelic relationship on two homologous chromosomes (“trans”-configuration). After crossing 7031-A1 lines with 7031-A2 lines,all 190 of the resulting heterozygous A1A2 plants displayed malesterility, whereas the remaining 303 progeny plants (carrying onlyone or no barnase locus) were fertile. This result represents thefirst intein-mediated “trans-activation” of an agriculturally im-portant trait in plants that were derived from the sexual hy-bridization of parental plants that did not express the trait. Thepotential practical applications of “recessive” systems that usetwo components “linked in repulsion” are not limited to hybridseed systems. The principle may lead to numerous technicalsolutions for efficient germplasm or trait control including thecontrol of transgene flow, thereby enabling the generation ofmore biologically contained transgenic plants. The linkage ofa second split gene providing a trait of interest to a split pollen orseed-specific expressed barnase gene prevents the sexual trans-mission of the trait of interest (27, 28).Fertility restoration in the hybrid progeny is robust, because all

836 F1 plants that carried either the A1 locus (411 plants, 49%)or the A2 locus (425 plants, 51%) were fully fertile. As isexpected in the event of isoallelic loci, we did not detect any F1plants that lacked both A1 and A2 loci. However, 13 of the 849 F1plants (1.5%) were identified as carrying the genotype A1A2.These individuals occurred sporadically (the 13 nonhybridprogeny plants were derived from 12 independent female plants). Itcannot be excluded that a proportion of these plants resulted fromunintended cross-pollination or contamination during handling inthe greenhouse. However, the more likely explanation is that insome cases, florets of the female plants may produce an amountof viable pollen that is sufficient for self-pollination. Consistentwith this hypothesis, in occasional cases, 10–20% fertile pollengrains were detected (Fig. S2F).The split-gene system provides several benefits that primarily

originate from the isoallelic (allelic) position of the comple-mentary barnase fragments. It relies on the genetic modificationof just one of the two parents. In contrast, genetically manipu-lated pollinators are required in the case of dual-componentdominant systems, such as Seedlink or CMS, which limits theflexibility of dual-component dominant systems in practical ap-plications. This property is of particular importance for thecleistogamous crop wheat because most wheat varieties lack theparticular floral traits that enable a high and consistent level ofpollen shed (29). Thus, the breeding of plants that may act aspollinators for hybrid wheat breeding is complex and should notbe constrained by the requirement for transgenes in the malecrossing partner (7). Moreover, the split-gene system does notrequire restorer genes for robust fertility restoration. Finally, thesplit-gene concept is expected to be broadly applicable to manywheat varieties and other plant species because the integral ge-netic elements (integrase, barnase, and inteins) are genericrather than plant-specific, and these elements have been shownto function in several monocotyledonous and dicotyledonousplant species (2, 30, 31).A penalty that is associated with the development of the split-

gene system is the complexity of the establishment of loci A1 and

Table 1. Production of the male-sterile line for hybrid seedproduction

7031-A1 × 7031-A2 from T4 A1 only A2 only Neither Both

No. of progeny 123 95 85 190Fertile 123 95 85 0Male-sterile 0 0 0 190

Genotypes and phenotypes of genetic segregants resulting from a crossbetween lines carrying 7031-A1 and 7031-A2. Note that homozygous andhemizygous parental lines were used.

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A2. Transformation of the primary constructs was performedusing particle bombardment. In the majority (78%) of T2 plantsthat displayed recombination, the loci A1 and A2 were not sep-arated. Therefore, we conclude that most of the primary trans-formants carried rather complex DNA integrations that mayhave been resolved into unpredictable products by single ormultiple consecutive phiC31 recombination events. In the future,Agrobacterium-mediated transformation may be applied to pro-duce less complex events that segregate more A1 and A2 isolocifollowing recombinase-mediated separation, thus making thesystem development more efficient. An alternative approachmay be to transform constructs carrying only A1 and A2 in-dependently, followed by screening for closely integrated eventsthat display an acceptable rate of recombination between the twoloci. This approach has the advantage of saving the integrase-mediated recombination step; however, it is compromised by therequirement of screening a large number of integration eventsand by the incomplete repulsion of the events.Importantly, to apply the split-gene system to other wheat

varieties, the A1 and A2 loci are not required to be developed denovo. Rather, using standard marker-assisted breeding, lineconversion may be accomplished by repetitive backcrossing ofthe A1 and A2 loci independently.The genetic design of the male-sterile female line provides the

opportunity for maintaining the sterile lines, which is a pre-requisite for a future commercial application of this technique.Crossing the heterozygous female line (A1A2) with a homozy-gous fertile “maintainer” line (e.g., A1A1 or A2A2) results in∼50% of the male-sterile progeny having the female genotype. Infuture approaches, linking the isolocus that is not present in themaintainer line to a transgene conferring herbicide resistancemay enable the selection of the female genotype A1A2. However,this in-field production of the male-sterile lines would requireoverplanting and eliminating half of the sown plants to attaina pure stand of male-sterile female plants on the stripe-breeding

production field. Alternatively, the female A1A2 line may beproduced by crossing homozygous A1A1 and A2A2 lines. Thiscross would result in 100% male-sterile plants (A1A2). For thispurpose, CHAs may be used to sterilize either the A1A1 line orthe A2A2 line in small-scale applications. The resulting pure,sterile populations would enable the mixed planting of male andfemale parental lines in the production field, a strategy thatwould improve the economics of hybrid wheat seed productionbecause almost the entire area could be used for hybrid seedharvesting (32). The use of CHAs on a small scale is, however,technically difficult.Recently, several other transgenic systems were suggested in

which male sterility was induced by external stimulation of anotherwise fertile plant (“conditional male-sterility systems”).Syngenta generated tobacco plants that expressed a modifiedform of D-amino acid oxidase (DAAO) in the tapetal cells (33).When D-glufosinate, the nonphytotoxic enantiomer of the com-mercial herbicide glufosinate, is sprayed as a “protoxin,” DAAOoxidizes D-glufosinate to 2-oxo-4-(methylphosphinyl)-butanoicacid; phytotoxic L-glufosinate is subsequently formed via inter-mediates. This compound causes tapetal cell death, which in turninduces male sterility. In a system that has been used by Monsanto,the expression of a 5-enolpyruvylshikimate 3-phosphate synthase(EPSPS), which confers herbicide tolerance, is specifically inhibitedin tapetal cells by either miRNA-mediated translational inhibitionor transcriptional repression (34, 35). Thus, cells that are necessaryfor pollen development are specifically unprotected against thephytotoxic effects of glyphosate and are killed during herbicidetreatment. However, the benefits of conditional male sterility arecompromised by the requirement for the large-scale spraying ofchemicals onto production fields, resulting in increased costs andshort biological application windows similar to classical CHAs.Compared with line varieties, hybrid wheat currently occupies

only a small niche in the market. Less than 1% of the global wheatarea is planted with hybrids (9). Apart from a cost-effective

Femaleparent

A

A2

A1

Hybrid F1B

A1

A2

Fig. 3. Phenotype of the female crossing partner and the hybrid F1. (A) The morphology of the ears from the female parent that carries both isoloci 7031-A1

and 7031-A2. The ears display the typical “open floret” phenotype and contain no seeds. Other ears of these plants were used as pollen acceptors for theproduction of hybrid F1 plants (B). All hybrid progeny plants displayed full fertility and carry either A1 or A2.

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hybridization system, there are several biological bottlenecks thathamper the implementation of a cost-efficient hybrid seed pro-duction system. Because the floral biology of most wheat varie-ties is ill-adapted to cross-fertilization (29), a “redesigning” ofthe cleistogamic wheat flower has been suggested (7). Ideal-ly, both male and female parental plants would possess openflowering spikelets. For optimal hybrid seed production, thesterile females must open their flowers simultaneously with thoseof the male crossing partners, which must release much long-lived viable pollen with good aerodynamics outside the floret.However, wheat produces only a comparably low level of pollenthat settles quickly because it is relatively heavy and is viable onlyfor a relatively short period (36).Finally, because the heterosis of a hybrid may increase with

genetic divergence between the parents, it will be of importanceto group wheat lines into genetically divergent heterotic poolsthat combine the maximum use of yield heterosis with a highend-user quality (9). Currently, no divergent “heterotic pools”exist for wheat.This report describes the successful implementation of a

transgenic approach for hybrid wheat production. However,whether the prospects of the split-gene system will be translatedinto commercial hybrid wheat breeding and products in the fu-ture remains open. Ultimately, the successful realization of anygenetically modified organism-based technology for agriculturewill depend on industrial and consumer acceptance and on in-ternational trade regulations (37). Despite these issues, we hopethat the split-gene system described here will be a valuable futurecontribution to unblocking bottlenecks associated with hybridwheat breeding.

Materials and MethodsTransgenic Wheat Plants. Spring wheat (Triticum aestivum L. cultivar Bob-white) was used throughout this study. The plants were grown undercontrolled greenhouse conditions with 16 h of light at 20 °C and 8 h ofdarkness at 16 °C. The provectors were transformed using biolistic par-ticle bombardment using a modified protocol that has been describedpreviously (38).

Transgenic calli were selected on amedium containing 100mg/L hygromycinB (Roche). Transgenic plantlets were selected in a medium containing 50 mg/Lhygromycin B. For maintenance and propagation, male-sterile plantswere pollinated by placing pollen-shedding anthers of untransformedplants into the closed flower. Plants were propagated by embryo rescueon half strength Murashige and Skoog medium, (M0222, Duchefa) supple-mented with 15 g/L sucrose, 0.1 g/L casein hydrolysate, 0.2 mg/L copper(II)sulfate pentahydrate, 0.5 mg/L thiamine, and 50 mg/L myo-inositol.

Molecular Analyses of the Transgenic Plants. The experimental strategies usedfor polymerase chain reactions and DNA gel blot analyses are detailed inTable S2 and Fig. S1.

Fertility Assays. Fertility was evaluated by determining the occurrence ofseeds onmature spikes. Alternatively, to determine fertility beforemanualpollination, the amount and vitality of the pollen was assayed. For thispurpose, pollen from two flowers of two to seven ears from each plant wasstained with Alexander stain (39) and examined under a light microscope.The assays were performed 2–3 d before anthesis.

ACKNOWLEDGMENTS. We thank Manja Franke, Corinna Schollmeier,Silvana Fischer, Susanne Knüpffer, Robert Jerchel, and Kerstin Denzinfor technical assistance and greenhouse management. We thank Dr. IngoSchubert, Dr. Florian Mette, and Dr. Heike Gnad for their comments on themanuscript and Dr. Renate Schmidt for fruitful discussions. We thank theBundesministerium für Bildung und Forschung for funding the project KMU-Innovativ (Grant FZK0315889B) as part of a joint project between the LeibnizInstitute of Plant Genetics and Crop Plant Research and Nordsaat GmbH.

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