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Overview of Clinical Data Standards Roberto A. Rocha, MD, PhD, FACMI Clinical Informa9cs Director, Partners eCare, Partners Healthcare System Assistant Professor of Medicine Division of General Internal Medicine and Primary Care, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School Big Data in Healthcare: The Impact on Healthcare Quality, Cost and Access in China = April 18=19, 2016 =

RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

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Page 1: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Overview'of'Clinical'Data'Standards'

Roberto'A.'Rocha,'MD,'PhD,'FACMI'

Clinical'Informa9cs'Director,'

Partners'eCare,'Partners'Healthcare'System'

Assistant'Professor'of'Medicine'

Division'of'General'Internal'Medicine'and'Primary'Care,'Department'of'

Medicine,'Brigham'and'Women’s'Hospital,'Harvard'Medical'School'

Big%Data%in%Healthcare:%The%Impact%on%Healthcare%Quality,%Cost%and%Access%in%China%=%April%18=19,%2016%=%%

Page 2: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Overview'

• Background'– Data'representa9on,'knowledge'exchange'

• Clinical'data'representa9on'– Terminologies,'Documents,'Informa9on'models'

• Clinical'knowledge'exchange'– InfobuMons,'Order'Sets,'CDS'Services'

• Conclusions'– Opportuni9es,'forms'of'par9cipa9on'

Page 3: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Data'&'Knowledge'interoperability'

Home%

Ambulatory%Visit%

Hospital%

Procedure%

Rehabilita7on%

Phase%

Data%+%Knowledge%

Data%+%Knowledge%Data%+%Knowledge%

Data%+%Knowledge%

Interoperability%

Page 4: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Definitions'(1/2)'

• Standard%O'“A'document,'established'by'

consensus%and'approved'by'a'recognized%body,'which'provides'rules,'guidelines,'or'characteris9cs'for'ac9vi9es”'

J.H. van Bemmel & M.A. Musen - Handbook of Medical Informatics

Page 5: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Definitions'(2/2)'

• Interoperability%O'“The'ability'of'two'or'more'

systems'or'components'to'exchange%informa9on'and'to'use%the'informa9on'that'

has'been'exchanged.”'

IEEE Standard Computer Dictionary: A Compilation of IEEE Standard Computer Glossaries. Institute of Electrical and Electronics Engineers, 1990.

Page 6: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Development'of'standards'

• SDO:'Standards'Developing'Organiza9on'• Many'na9onal'and'interna9onal'organiza9ons'

– Interdependencies'and'overlapping'efforts'• Several'with'specific'focus'on'Healthcare'

– Examples:'HL7,'IHE,'DICOM,'CDISC,'…''

Page 7: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

CLINICAL'DATA'REPRESENTATION'

Page 8: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Clinical'data'representation'(4/18)'

• Define'“data%points”'(elements%and'values)'using'available'standards'

• Define'logical'models%that'combine'data%points%and'provide'meaningful'clinical'

informa7on%

• Obtain'detailed'provenance%to'understand'how%and'when%data'was'acquired,'and'also'who%provided'the'data'

• Represent'seman7c%and'temporal%linkages%between'data'instances''

Page 9: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Clinical'data:'standards'

•  Data'elements'and'data'values'

– Available:'reference'terminologies'and'ontologies'

•  Informa9on'models'

– Work'in'progress:'isolated'efforts'and'collec9ons'

– Available:'clinical'documents'(mul9ple'types)'

•  Provenance'models'

– Work'in'progress:'compe9ng'models'

•  Seman9c'and'temporal'linkages'

–  Preliminary'work'

AddiDonal%work%is%needed%!%opportuniDes%

Page 10: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

LOINC'

•  Logical%Observa7on%Iden7fiers%Names%and%Codes%

• Organiza9on:'LOINC'CommiMee'

•  Purpose:'iden9fica9on'of'laboratory'and'clinical'observa9ons'(HL7'messages)'

•  Content:'laboratory'tests,'clinical'measurements,'

documents,'etc.'

•  Informa9on:'

–  hMp://loinc.org''

Page 11: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

hMps://search.loinc.org''

Page 12: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

SNOMED'CT'

•  Systema7zed%Nomenclature%of%Medicine%–%Clinical%Terms%

•  OrganizaDon:'Interna9onal'Health'Terminology'Standards'

Development'Organisa9on'(IHTSDO)'–  SNOMED'Terminology'Solu9ons'O'College'of'American'Pathologists'

•  Purpose:'Encoding'of'mul9ple'clinical'domains'

•  Content:'Comprehensive'(diseases,'signs,'symptoms,'living'

organisms,'chemicals,'body'parts,'morphology,'occupa9ons,'

modifiers,'etc.)'

•  Informa9on:''

–  hMp://www.ihtsdo.org''

Page 13: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

hMp://browser.ihtsdotools.org'

Page 14: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Many'others'(incomplete'list)'

•  RxNorm:'clinical'drugs'and'drug'delivery'devices'(NLM)'

hMps://www.nlm.nih.gov/research/umls/rxnorm/''

•  NDFNRT:'Na9onal'Drug'File'O'Reference'Terminology'(VA)'

hMp://evs.nci.nih.gov/`p1/NDFORT/'''

•  IIS:'Vaccina9on'code'sets'(CDC)'hMp://www.cdc.gov/vaccines/programs/iis/codeOsets.html'''

•  HL7%Vocabulary%domains'(messaging,'documents,'services)'

hMp://www.hl7.org/documentcenter/public_temp_1A973D1BO1C23O

BA17O0CCBD68843B23790/standards/vocabulary/vocabulary_tables/infrastructure/

vocabulary/vocabulary.html''

Page 15: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Document'standards'

•  Clinical%Document%Architecture%(CDA)%

•  Organiza9on:'HL7'Interna9onal'•  Purpose:'document'markup'standard'that'specifies'the'

structure%and'seman7cs%of'"clinical'documents"'for'the'

purpose'of'exchange'between'healthcare'providers'and'

pa9ents'

•  Content:'–  Con9nuity'of'care,'procedure'note,'pa9ent'assessments,'etc.'

–  Clinical'oncology'treatment'plan,'PHR'plans,'gene9c'tes9ng'reports,'

public'cancer'registries,'etc.''

–  Data'Provenance'•  Informa9on:'

–  hMp://www.hl7.org/implement/standards/product_brief.cfm?product_id=7'''

Page 16: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Information'models'

•  Clinical%Informa7on%Modeling%Ini7a7ve%(CIMI)%

•  Organiza9on:'HL7'Interna9onal'•  Purpose:'Improve'the'interoperability'of'healthcare'systems'

through'shared'implementable'clinical'informa9on'models'O'a'

single%curated%collec7on%with'bindings'to'reference'terminologies%

•  Content:'laboratory'test'results,'vital'signs,'diagnoses,'procedures,'pa9ent'measures,'etc.'

•  Informa9on:'

–  hMp://www.hl7.org/Special/CommiMees/cimi/index.cfm'

–  hMp://www.opencimi.org''

Page 17: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

CLINICAL'KNOWLEDGE'EXCHANGE'

Page 18: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Implementation'of'CDS'modalities%

CDS'modality% Types'of'Knowledge'Assets%

1.'Information'selection'and'

retrieval'Reference'

2.'Information'aggregation'and'

presentation' Actionable'

3.'Data'entry'assistance'

4.'Event'monitors'

Executable'

5.'Care'workflow'assistance'

6.'Descriptive'or'predictive'modeling'

Cost'

Ava

ilability'

Complex

ity'

Maint

aina

bility'

Page 19: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

StandardsTbased'implementations?'CDS'modality% Relevant'Interoperability'Standards'

(data'&'knowledge'representation'and'exchange)'

1.'Information'selection'and'

retrieval'

Guideline%Elements%Model%(GEM):'ASTM'

ContextNaware%Info%Retrieval%(InfobuMon):'HL7'Structured%Product%Label'(medica9ons):%HL7'

2.'Information'aggregation'and'

presentation'Clinical%Document%Architecture%(CDA):'HL7'

Health'Quality'Measures'Format'(eMeasures):'HL7'

Order'sets:'HL7'3.'Data'entry'assistance'

4.'Event'monitors'

Arden%Syntax%for%Medical%Logic%Systems:'HL7'GELLO%N%A%Common%Expression%Language:'HL7'

Decision'Support'Services:'HL7'

Virtual'Medical'Record'(vMR):'HL7'

5.'Care'workflow'assistance'

6.'Descriptive'or'predictive'modeling'

Kawamoto K, Del Fiol G, Lobach DF, Jenders RA. Standards for scalable clinical decision support: need, current and emerging standards, gaps, and proposal for progress.

Open Med Inform J. 2010;4:235-44.

Page 20: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Problem'List'infobuttons'

Informa9on'about'

“Depression”'

Page 21: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

HL7'Infobutton'standard'Del'Fiol'G,'Huser'V,'Strasberg'HR,'

Maviglia'SM,'Cur9s'C,'Cimino'JJ.'

Implementa9ons'of'the'HL7'ContextO

Aware'Knowledge'Retrieval'

("InfobuMon")'Standard:'Challenges,'

strengths,'limita9ons,'and'uptake.'J%Biomed%Inform.'2012'Jan'2.'

Page 22: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Integration'across'repositories'

•  Common%Terminology%Services%–%Release%2%(CTS2)%

•  Organiza9on:''HL7'+'Object'Management'Group'(OMG)'

•  Purpose:'standardized'interface'for'the'use'and'management'

of'terminologies'(extensible'to'knowledge'assets)%

•  Content:'concepts,'value'sets,'code'systems,'en99es,'

informa9on'models,'APIs,'etc.'

•  Informa9on:'

–  hMp://www.hl7.org/implement/standards/product_brief.cfm?product_id=384'

–  hMp://www.omg.org/spec/CTS2/'

Page 23: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Content%Sources%(e.g.,%EHR%content,%Open%source%content,%Licensed%content,%etc.)%

IMPORT%(XML%format%compa7ble%with%available%standards%–%e.g.,%CTS2)%%

Content%Consumers%(e.g.,%Clinical%applica7ons%and%services,%EHR%systems,%etc.)%%

Publication

Authoring

Linking Validation

Review & Vetting

ETL%

CKMS%

EXPORT%(same%XML%format%used%for%Import)%%

ETL%

Page 24: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

CONCLUSIONS'

Page 25: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Known'challenges'with'standards'

• Widespread%use%of'the'standard'– Measurement'of'acceptance%(success)'–  Implementa9on'costs%versus'benefits%obtained'

•  Standards'usually'define'a'nonNprescrip7ve%model'

–  Formal'document,'precise'defini9ons,'wellOdefined'

problems'(scenarios)'

–  Conformance,'variability,'evolu7on%

•  High'degree'of'complexity%and'dynamism%– Wide'spectrum'of'scenarios'and'approaches'

–  Con9nuous'evolu7on%(dynamic):'domain'+'technology'

–  Extensive'(cumbersome)'documenta9on'

Page 26: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Participate!'

•  Most'SDOs'welcome'open'and'broad%par9cipa9on'–  Healthcare'providers,'government'stakeholders,'payers,'

pharmaceu9cal'companies,'system'vendors,'consultants'

•  Understand'the'scope'and'applicability'of'exis9ng'standards'–  Gain'access%to'available'standards'–  Decide'how'each'standard'applies%to'your'organiza9on'

•  Contribute'to'and'influence'the'development'of'standards'

–  Bring'your'specific%needs%and'discuss'implementa9on'op9ons'

–  Seek'informa9on'from'other'stakeholders'to'make'informed%decisions%

•  Achieve'industry'leadership'by'demonstra9ng'interoperability'

–  Learn'about'industry'best%prac7ces%–  Understand'implementa9on'7meline%and'costs%

–  Improve'the'quality%and'sustainability%of'your'local'systems'

Page 27: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Acknowledgements%

Perry'Mar'

Sarah'Collins'

David'Dubois'

Ben'Gross'

Saverio'Maviglia'

Beatriz'Rocha'

Other'members'of'the'Clinical%Informa7cs%Team%at'Partners'

Stanley'Huff'

Members'of'the'Modeling%and%Terminology%Teams%at'Intermountain'

Page 28: RRocha - Overview of Clinical Data Standards - Apr 2016 · Overview'of'Clinical'Data' Standards' Roberto'A.'Rocha,'MD,'PhD,'FACMI' Clinical'Informa9cs'Director,' Partners'eCare,'Partners'Healthcare'System

Thank%you!%

Roberto A. Rocha, MD, [email protected]

http://scholar.harvard.edu/rarocha

This'work'by'Roberto'A.'Rocha'is'licensed'under'a'Crea9ve'Commons'AMribu9onO

NonCommercialOShareAlike'4.0'Interna9onal'License'