1
Wild-type variant formed dendritic, continuous pellicles; eps - formed deformed, discrete pellicles; due to activation of other related genes of eps operon; Wrinkled, channelized topology of the Wild-type pellicle could be hydrophobic (Werb et al., 2011). Viscosity & EPS Composition Bacillus subtilis is well-known for certain PGPR (Plant Growth Promoting Rhizobacteria) qualities, but the exact mechanism(s) in influencing evaporation and water retention is not well understood; As a stress-tolerant bacteria, Bacillus subtilis can produce visco-elastic biofilm to cope with the fluctuating soil water conditions. This, in turn, can affect the hydraulic and interfacial properties of soil; Identifying key missing links between the important physicochemical traits of the early- stage biofilm and EPS (Extra-cellular Polymeric Substances) of Bacillus subtilis and soil physical and hydraulic properties is the motivation of this work; Research outcomes may contribute to developing biological strategies to increase soil water retention and crop production in arid regions. To investigate water percolation and evaporation from sand inoculated with EPS- producing B. subtilis strain FB17 (wild-type) and its EPS-knockout mutant (eps - ); To elucidate the mechanisms by which the physicochemical properties of EPS affect water-related physical and hydrological properties of sand. v Treatments: Wild-type (B. subtilis, FB17) and eps - (EPS-knockout mutant). Column experiments: Introduction Objectives Materials and Methods Conclusions Role of Bacillus Subtilis, A Plant Growth-Promoting Rhizobacteria, in Improving Soil Hydro-Physical Properties Fatema Kaniz, Harsh Bais, and Yan Jin Department of Plant and Soil Sciences, University of Delaware Results – Percolation & Water Distribution Inoculation with both the wild-type and eps - mutant reduced percolation rate; Bacteria-treated columns showed heterogeneous water distribution pattern whereas water distribution in the control was homogeneous; The results suggest hydraulic decoupling. Evaporation & Water Retention Both bacterial strains increased water retention of a fine sand during both upward (evaporation) and downward (percolation) flow of water; Interrupted capillarity, decreased wetting and hydraulic decoupling are likely the causative mechanisms for these observations; Structural development is not an essential mechanism in EPS-driven water retention at the early-stages of biofilm formation; The results clearly demonstrate the effects of surface tension, viscosity and their interplay on water behavior in bacteria-treated media; The similar effects observed for both the wild-type and mutant strains of B. subtilis highlight the complexity and our limited understanding on the mechanisms through which PGPRs mediate changes in soil water status. Control Wild-type Mutant-treated Higher critical drying front depth (L c ) in the control than in the treatment columns; Less cumulative evaporation from the treatments; No distinct evaporation phase transition between phase I and phase II; Wild-type strain-treated sand retained the most water towards the drier end of the WRC (from 15% water content). Pellicle Formation & SEM Imaging Contact Angle and Surface Tension References Lehmann, P., S. Assouline, & Or, Dani (2008). Characteristic lengths affecting evaporative drying of porous media. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 77:056309. doi:10.1103/PhysRevE.77.056309 Werb, M., García, C.F., Bach, N.C., et al (2017). Surface topology affects wetting behavior of Bacillus subtilis biofilms. npj Biofilms Microbiomes 3:0–1. doi: 10.1038/s41522-017-0018-1 Both strains increased contact angle of treated sand and reduced surface tension of LB solution; Water droplet persistency showed reduced wetting or hydraulic stabilization by the wild-type. Control 300 μm Wild-type 3 μm Control 3 3 μm 3 μm Wild-type Wild-type 300 μm eps - 3 μm CTL eps - Dye deposition 1d 2d 3d 4d 6d Experimental set-up. OD 600 =0.09 Desiccated Wild-type eps - No structural development Cell-queuing indicates early-stages of biofilm formation Visco-elastic profiles WT eps - CTL WT eps - CTL Percolation CTL WT eps - 0.13 0.14 0.1 Rate (cm/ sec) 0.17 0.08 0.09 0.13 0.09 0.11 h= −2σcosθ rρg (Lehmann et al., 2008) Increased viscosity or viscous dissipation length ( ) lowered evaporative loss by reducing the critical drying front depth (L c ): Higher contact angle and lower surface tension of the strains disrupted the water-film connectivity to reduce evaporation loss according to the Young- Laplace equation: The dampening effect of viscosity maintained the connectedness at the drier end (occurrence of Rayleigh instability in the presence of EPS at low Reynold’s number). The interplay between surface tension and visco-elasticity led to complex changes in water retention and flow in treated sand. Critical drying front depth (L c ) Possible Mechanisms G’ > G” means more elastic; G*= Total viscosity; Wild-type EPS is more visco-elastic than the mutant; Carbohydrate compositions are similar. Column dimension: ø4.37x9.66 cm; Sand size: 0.297-0.42 mm; Bacterial conc: 7x10 7 CFU/g; Initial water content (w/w): 5%; Infiltration amount: 20 ml dye water (~ field capacity water content). CTL= Control WT= Wild-type eps - = Mutant WT 0 0.1 0.2 0.3 0.4 0.5 0.6 0 1 2 3 4 5 Evaporation rate (cm/d) Time (d) Control Wild-type eps- Viscosity Surface tension Surface tension Wild-type eps - Viscosity Complementary Measurements: Water retention curve (WRC); Pellicle assay; Scanning electron microscope (SEM) imaging; Contact angle, viscosity & surface tension. Water Retention Curve Carbohydrate compositions L C = +1 24h 72h

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Page 1: Role of Bacillus Subtilis, A Plant Growth-Promoting

➢ Wild-type variant formed dendritic, continuous pellicles;

➢ eps- formed deformed, discrete pellicles; due to activation of other related genes of eps operon;

➢ Wrinkled, channelized topology of the Wild-type pellicle could be hydrophobic (Werb et al., 2011).

Viscosity & EPS Composition

❑ Bacillus subtilis is well-known for certain PGPR (Plant Growth Promoting Rhizobacteria)qualities, but the exact mechanism(s) in influencing evaporation and water retention isnot well understood;

❑ As a stress-tolerant bacteria, Bacillus subtilis can produce visco-elastic biofilm to copewith the fluctuating soil water conditions. This, in turn, can affect the hydraulic andinterfacial properties of soil;

❑ Identifying key missing links between the important physicochemical traits of the early-stage biofilm and EPS (Extra-cellular Polymeric Substances) of Bacillus subtilis and soilphysical and hydraulic properties is the motivation of this work;

❑ Research outcomes may contribute to developing biological strategies to increase soilwater retention and crop production in arid regions.

❑ To investigate water percolation and evaporation from sand inoculated with EPS-

producing B. subtilis strain FB17 (wild-type) and its EPS-knockout mutant (eps-);

❑ To elucidate the mechanisms by which the physicochemical properties of EPS affectwater-related physical and hydrological properties of sand.

v

❑ Treatments: Wild-type (B. subtilis, FB17) and eps- (EPS-knockout mutant).

❑ Column experiments:

Introduction

Objectives

Materials and Methods

Conclusions

Role of Bacillus Subtilis, A Plant Growth-Promoting Rhizobacteria, in Improving

Soil Hydro-Physical Properties

Fatema Kaniz, Harsh Bais, and Yan Jin

Department of Plant and Soil Sciences, University of Delaware

Results – Percolation & Water Distribution

➢ Inoculation with both the wild-type and eps- mutant reduced percolation rate;

➢ Bacteria-treated columns showed heterogeneous water distribution pattern whereas water distribution in the control was homogeneous;

➢ The results suggest hydraulic decoupling.

Evaporation & Water Retention

➢ Both bacterial strains increased water retention of a fine sand during bothupward (evaporation) and downward (percolation) flow of water;

➢ Interrupted capillarity, decreased wetting and hydraulic decoupling are likely thecausative mechanisms for these observations;

➢ Structural development is not an essential mechanism in EPS-driven waterretention at the early-stages of biofilm formation;

➢ The results clearly demonstrate the effects of surface tension, viscosity and theirinterplay on water behavior in bacteria-treated media;

➢ The similar effects observed for both the wild-type and mutant strains of B.subtilis highlight the complexity and our limited understanding on themechanisms through which PGPRs mediate changes in soil water status.

Co

ntr

ol

Wild

-typ

eM

uta

nt-

trea

ted

➢ Higher critical drying front depth (Lc) in the control than in the treatment columns;

➢ Less cumulative evaporation from the treatments;

➢ No distinct evaporation phase transition between phase I and phase II;

➢ Wild-type strain-treated sand retained the most water towards the drier end of the WRC (from 15% water content).

Pellicle Formation & SEM Imaging

Contact Angle and Surface Tension

References

Lehmann, P., S. Assouline, & Or, Dani (2008). Characteristic lengths affecting evaporative drying of porous media.Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 77:056309. doi:10.1103/PhysRevE.77.056309

Werb, M., García, C.F., Bach, N.C., et al (2017). Surface topology affects wetting behavior of Bacillus subtilis biofilms.npj Biofilms Microbiomes 3:0–1. doi: 10.1038/s41522-017-0018-1

➢ Both strains increased contact angle of treated sand and reduced surface tension of LB solution;

➢ Water droplet persistency showed reduced wetting or hydraulic stabilization by the wild-type.

Control 300 µm

Wild-type 3 μmControl 3 3 μm

3 μmWild-type

Wild-type 300 µm

eps- 3 μm

CTL eps-

Dye

dep

osi

tio

n

1 d 2 d 3 d 4 d 6 d

Experimental set-up.

OD600=0.09 Desiccated

Wild

-typ

eep

s-

No structural development

Cell-queuing indicates early-stages of biofilm formation

Visco-elastic profiles

WT eps- CTL WT eps-CTL

Perc

ola

tio

n

CTL WT eps-

0.130.14 0.1Rate (cm/ sec) 0.17 0.080.090.13 0.090.11

h =−2σcosθ

rρg

(Lehmann et al., 2008)

➢ Increased viscosity or viscous dissipation length (𝐿𝑉) lowered evaporative loss by reducing the critical drying front depth (Lc):

➢ Higher contact angle and lower surface tension of the strains disrupted the water-film connectivity to reduce evaporation loss according to the Young-Laplace equation:

➢ The dampening effect of viscosity maintained the connectedness at the drier end (occurrence of Rayleigh instability in the presence of EPS at low Reynold’s number).

➢ The interplay between surface tension and

visco-elasticity led to complex changes in water

retention and flow in treated sand.

Cri

tica

ldry

ing

fro

nt

dep

th(L

c)

Possible Mechanisms

➢ G’ > G” means more elastic;

➢ G*= Total viscosity;

➢ Wild-type EPS is more visco-elastic than the mutant;

➢ Carbohydrate compositions are similar.

▪ Column dimension: ø4.37x9.66 cm;

▪ Sand size: 0.297-0.42 mm;

▪ Bacterial conc: 7x107 CFU/g;

▪ Initial water content (w/w): 5%;

▪ Infiltration amount: 20 ml dye water

(~ field capacity water content).

CTL= ControlWT= Wild-typeeps-= Mutant

WT

0

0.1

0.2

0.3

0.4

0.5

0.6

0 1 2 3 4 5

Evap

ora

tio

n r

ate

(cm

/d)

Time (d)

Control Wild-type eps-

Vis

cosi

ty

Surface

tensio

n

Surf

ace

ten

sio

n

Wild-type eps-

Visco

sity

❑ Complementary Measurements:

▪ Water retention curve (WRC);

▪ Pellicle assay;

▪ Scanning electron microscope (SEM) imaging;

▪ Contact angle, viscosity & surface tension.

Water Retention CurveCarbohydrate compositions

LC=𝐿𝐺

𝐿𝐺𝐿𝑉+1

24h 72h