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Robustness ity of a system to perform consistently under a variety of co

Robustness

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Robustness. the ability of a system to perform consistently under a variety of conditions. Elements of robustness:. feedback. degeneracy. competition. modularity. Feedback. A classic example of feedback in neural circuits: error correction during smooth pursuit. feedback. retinal - PowerPoint PPT Presentation

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Page 1: Robustness

Robustness

the ability of a system to perform consistently under a variety of conditions

Page 2: Robustness

competition

degeneracy

modularity

feedback

Elements of robustness:

Page 3: Robustness

Feedback

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FeedbackController

~100 msretinalinputs

GoalFeedforward

Controller Eyeball+ eyemovement

SensedVariable

feedback

A classic example of feedback in neural circuits: error correction during smooth pursuit

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The big idea:

Feedback• permits feedforward programs to be corrected according to the success of feedforward control• can correct for both fluctuations in the target and fluctuations in the feedforward program

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Degeneracy

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A classic example of degeneracy in biology: the genetic code

Because multiple codes can specify the same amino acid, the genetic code is said to be degenerate.

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degeneracy – the condition of having multiple distinct mechanisms for reaching the same outcome

redundancy – the condition of having multiple copies of the same mechanism

this is distinct from

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Degeneracy in the genetic code confers

• tolerance to synonymous mutations• thus greater genetic diversity within a species• and thus more simultaneously possible avenues for evolution

Evolvability is the capacity to adapt by natural selection

Degeneracy can increase evolvability by distributing system outcomes near phenotypic transition boundaries.

CGU ↔ AGGCAU ←

His Arg Arg

→ UGG

Trp

Page 10: Robustness

Swensen & Bean, J. Neurosci. 2005

cell 1 cell 2

Neuron-level degeneracy:robustness of bursting in cerebellar Purkinje cells

acutely dissociated Purkinje somata

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Swensen & Bean, J. Neurosci. 2005

cell 1

cell 2

cell 3

cell 4

cell 5

cell 6

Neuron-level degeneracy:robustness of bursting in cerebellar Purkinje cells

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Neuron-level degeneracy:robustness of bursting in cerebellar Purkinje cells

Swensen & Bean, J. Neurosci. 2005

Page 13: Robustness

Neuron-level degeneracy:robustness of bursting in cerebellar Purkinje cells

Swensen & Bean, J. Neurosci. 2005

An acute decrease in Na+ conductance produces a compensatory increase in voltage-dependent and Ca2+–dependent K+ conductances.

Page 14: Robustness

Neuron-level degeneracy:robustness of bursting in cerebellar Purkinje cells

Swensen & Bean, J. Neurosci. 2005

Page 15: Robustness

Neuron-level degeneracy:robustness of bursting in cerebellar Purkinje cells

Swensen & Bean, J. Neurosci. 2005

A chronic decrease in Na+ conductance produces a compensatory increase in Ca2+ conductance.

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Degeneracy and feedback

input outputsystemvariables

set point

homeostat

In this example, • membrane potential is the robust system output• a fast feedback loop is created by voltage-dependent and Ca2+-dependent K+ channels• a slow feedback loop regulates Ca2+ conductances• many combinations of conductances (i.e., “system variables”) can produce similar output

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Goldman, Golowasch, Marder, & Abbott, J. Neurosci. 2001

Mapping the state space of neuron-level degeneracy:robustness of bursting in stomatogastric ganglion neurons

model stomatogastric ganglion neuron

Page 18: Robustness

Goldman, Golowasch, Marder, & Abbott, J. Neurosci. 2001

Mapping the state space of neuron-level degeneracy:robustness of bursting in stomatogastric ganglion neurons

model stomatogastric ganglion neuron

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Degeneracy can increase the capacity for modulation by allowing the neuron to reside near firing state transition boundaries.

To maximally change the firing behavior of the neuron, a neuromodulator would modify conductances along an axis of high sensitivity (green arrow).

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Prinz et al. Nature 2004

Circuit-level degeneracy:robustness of patterns in the stomastogastric ganglion

lobster stomatogastric ganglion recording with sharp microelectrodes

the pyloric network the pyloric rhythm

note: all synapses are inhibitory

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Prinz et al. Nature Neuroscience 2004

Circuit-level degeneracy:similar network activity from disparate cellular and synaptic parameters

model neurons of pyloric network

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The big idea:

Degeneracy• permits tolerance to many kinds of perturbations• while also maintaining sensitivity to other sorts of perturbations

Degeneracy also allows a population to harbor latent diversity, potentially creating diverse avenues for evolution or modulation.

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Competition

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Another classic example of competition in neural circuits: developing ocular dominance columns

Luo & O’Leary, Ann. Rev. Neurosci. 2005

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A mechanism for competitive synaptic interactions: spike-timing dependent plasticity

Song & Abbott, Nat. Neurosci. 1999Abbott, Zoology 2003

pre leads post pre lags post

This mechanism creates a competition between independent presynaptic neurons for control of the postsynaptic neuron’s spiking.

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A mechanism for competitive synaptic interactions: spike-timing dependent plasticity

Song & Abbott, Nat. Neurosci. 1999Abbott, Zoology 2003

Competitive interactions between neurons are enforced over a large range of presynaptic firing rates. Thus, total input synapse strength onto the postsynaptic cell remains roughly constant despite large changes in presynaptic input.

presynaptic rate = 10 Hz presynaptic rate = 13 Hz

model

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The big idea:

Competition• allows a circuit to self-assemble in a manner appropriate to current conditions• tends to enforce constancy of total synapse strength while allocating strong synapses to the most effective inputs.

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Modularity

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A classic example of modularity in biology:the domain structure of genes and proteins

“Exon shuffling” was recognized early in molecular biology as a potential mechanism to generate diverse novel proteins based on existing functional building-blocks.

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Modularity in neural circuitsa putative example: “cerebellar-like” circuits

Bell, Han, & Sawtell, Annu. Rev. Neurosci. 2008Oertel & Young, Trends Neurosci. 2004Roberts & Portfors, Biol. Cybern. 2008

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Bell, Han, & Sawtell, Annu. Rev. Neurosci. 2008Oertel & Young, Trends Neurosci. 2004Roberts & Portfors, Biol. Cybern. 2008

Modularity in neural circuits

mammalian cerebellum mammalian dorsal cochlear nucleusteleost cerebellum

teleost medial octavolateral nucleus mormyrid electrosensory lobe gymnotid electrosensory lobe

“cerebellar-like” circuits in vertebrates

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Modularity in neural circuitsa putative example: “cerebellar-like” circuits

• principal cells receive excitatory input from a very large population of granule cells forming parallel axon bundles that target the spiny dendrites of principal cells

• principal cells also receive excitatory ascending input from sensory regions targeting the perisomatic/proximal region of principal cells

Bell, Han, & Sawtell, Annu. Rev. Neurosci. 2008Oertel & Young, Trends Neurosci. 2004Roberts & Portfors, Biol. Cybern. 2008

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Modularity in neural circuitsa putative example: “cerebellar-like” circuits

• parallel fibers carry “higher-level” information (corollary discharge, proprioceptive info)

• ascending inputs carry lower-level information (pertaining to the same sensory modality or task)

• parallel fiber signals can in principle “predict” the lower-level signals

• “prediction” is learned by pairing parallel fiber input with ascending input

• pairing produces a depression of parallel fiber inputs (anti-Hebbian plasticity)

Bell, Han, & Sawtell, Annu. Rev. Neurosci. 2008Oertel & Young, Trends Neurosci. 2004Roberts & Portfors, Biol. Cybern. 2008

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Modularity in neural circuitsa putative example: a visual cortical hypercolumn

Horton & Adams, Philos Trans R Soc Lond B Biol Sci. 2005

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Rakic Nature Neuroscience 2009

Modularity in evolutionRadial unit lineage model of cortical neurogenesis

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Modularity can permit an organism to process a new input without evolving an entirely novel circuit from scratch—in effect, building diverse objects using existing building-blocks.

Sharma, Angelucci, & Sur, Nature 2001von Melchner, Pallas, & Sur, Nature 2001

Modularity in neural circuitsre-routing experiments show that auditory cortex can process visual inputs

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The big idea:

Modularity• permits diverse outcomes from recombination of structural/functional units• allows continuous expansion of modular structures by regulation of module number• may permit new inputs to “plug in” to existing structures