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Reference population is Europeon men 35-79
Is 42-57% attributable to genetics
12 loci are used to calculate the risk of prostate cancer
Increased risk of prostate cancer = rs1447295
Decreased risk of prostate cancer = rs1447295 fd
Risk of alzeimers for greg = 12.6%
1 snp is used to calculate the risk for this disease. But it has variants.
APOE gene
Greg mendel – haplotype V
Haplotype V originated in Iberia during the ice age
Lily mendel – H3
Haplotype h3 originated from the near east and then expanded throughout Europe toward the end of the ice age.
Greg – haplotype I1 from Europe
Lil does not have a haplotype
Greg Neanderthal ancestry – 2.6%
Lily Neanderthal ancestry – 2.8%
The adh1B gene is on chromosome 4
Accounts for 19 SNPs for the gene
A no call means no call
No call means that it failed.
The snp if located on chromosome 15
Lily has a genotype of AC
Greg has a genotype of AA
Snp rs762551
All
Allele frequency – A – 63%
G – 37%
Genotype a/a = 0.412
Genotype a/c = 0.436
Genotype c/c = 0.152
Africa
0.562
0.438
0.322
0.480
0.198
America
0.758
0.242
0.591
0.334
0.075
Asia
0.673
0.327
0.454
0.437
0.109
Europe
0.680
0.320
0.475
0.410
0.115