Query results of copy number alternations compared with …fp.amegroups.cn/cms/b1237ee51a6b268f9c8278f795f21f71/tcr... · 2020-03-16 · Query results of copy number alternations

Query results of copy number alternations compared with Firehose Legacy study

Track_name track_typeTCGA-AA-3664TCGA-AG-A032TCGA-3L-AA1BTCGA-D5-5538TCGA-D5-5541TCGA-WS-AB45

American Joint Committee on Cancer Tumor Stage CodeCLINICALT3 T3 T2 T3 T3 T3

Sex CLINICALFemale Male Female Female Male Female

Diagnosis Age CLINICAL 74 68 61 60 63 52

A1CF CNA

ALDH2 CNA

AMER1 CNA Deep DeletionDeep DeletionDeep DeletionDeep DeletionDeep Deletion

AR CNA Amplification

ATRX CNA Deep DeletionDeep Deletion

BCL7A CNA

BMPR1A CNA Deep Deletion

CCDC6 CNA

CHST11 CNA

CLIP1 CNA

CYP2C8 CNA

FANCG CNA

FOXO4 CNA

HNF1A CNA

KAT6B CNA

MED12 CNA Deep DeletionDeep Deletion

MSN CNA

NCOA4 CNA

NCOR2 CNA

NONO CNA

NUTM2A CNA

NUTM2B CNA

POLE CNA

PRF1 CNA

PTPN11 CNA

RET CNA

SETD1B CNA

SH2B3 CNA

SS18 CNA

TBX3 CNA

TET1 CNA

USP44 CNA

ZCCHC8 CNA

ZMYM3 CNA

ZNF521 CNA

Query results of copy number alternations compared with Firehose Legacy study

TCGA-AA-3680TCGA-AG-3890TCGA-AY-A54LTCGA-D5-6539TCGA-G4-6323TCGA-QG-A5YWTCGA-AY-A71XTCGA-F4-6461TCGA-4N-A93T

T4 T2 T2 T3 Tis T3 T2 T4b T4a

Female Male Female Female Male Female Female Female Male

67 62 74 45 50 55 54 41 67

Amplification

Deep DeletionDeep DeletionDeep DeletionDeep DeletionDeep DeletionDeep Deletion

Deep Deletion

Deep Deletion

TCGA-4T-AA8HTCGA-5M-AAT4TCGA-5M-AAT5TCGA-5M-AAT6TCGA-5M-AATATCGA-5M-AATETCGA-A6-A5ZUTCGA-A6-A56BTCGA-A6-A565

T3 T3 T4a T3 T3 T3 T3

Female Male Female Male Male Male Female

42 74 40 76 59 57 34

TCGA-A6-A566TCGA-A6-A567TCGA-A6-2671TCGA-A6-2672TCGA-A6-2674TCGA-A6-2675TCGA-A6-2676TCGA-A6-2677TCGA-A6-2678

T4 T3 T3 T3 T3 T3 T4 T3 T3

Female Male Male Female Male Male Female Female Female

55 56 85 82 71 78 75 68 43

TCGA-A6-2679TCGA-A6-2680TCGA-A6-2681TCGA-A6-2682TCGA-A6-2683TCGA-A6-2684TCGA-A6-2685TCGA-A6-2686TCGA-A6-3807

T3 T3 T3 T4b T4 T2 T3 T3 T3

Female Female Female Male Female Female Female Female Female

73 72 73 70 57 75 48 81 53


T4 T3 T3 T3 T2 T3 T2 T3 T3

Female Male Male Female Male Male Male Male Female

71 62 79 57 74 65 82 73 80


T3 T4a T3 T4b T3 T3 T2 T3 T3

Male Male Female Male Female Male Male Male Male

46 80 84 78 40 55 61 62 31


T3 T3 T3 T3 T3 T3 T2 T3 T3

Female Male Male Female Female Male Male Female Male

56 56 66 69 55 59 82 65 74

TCGA-A6-6781TCGA-A6-6782TCGA-AA-A00ATCGA-AA-A00DTCGA-AA-A00ETCGA-AA-A00FTCGA-AA-A00JTCGA-AA-A00KTCGA-AA-A00L

T4b T4a T3 T2 T3 T3 T4 T3 T3

Male Male Male Male Male Male Male Male Male

43 82 80 70 65 66 80 79 66

TCGA-AA-A00NTCGA-AA-A00OTCGA-AA-A00QTCGA-AA-A00RTCGA-AA-A00UTCGA-AA-A00WTCGA-AA-A00ZTCGA-AA-A01CTCGA-AA-A01D

T4 T3 T4 T2 T3 T1 T3 T2 T3

Male Female Female Female Male Male Male Male Female

75 83 66 64 50 80 70 75 47

TCGA-AA-A01FTCGA-AA-A01GTCGA-AA-A01ITCGA-AA-A01KTCGA-AA-A01PTCGA-AA-A01QTCGA-AA-A01RTCGA-AA-A01STCGA-AA-A01T

T3 T3 T2 T3 T3 T3 T3 T3 T3

Male Male Male Female Female Female Male Female Female

72 63 76 74 80 48 47 47 63

TCGA-AA-A01VTCGA-AA-A01XTCGA-AA-A01ZTCGA-AA-A02ETCGA-AA-A02FTCGA-AA-A02HTCGA-AA-A02JTCGA-AA-A02OTCGA-AA-A02R

T2 T2 T3 T3 T3 T3 T3 T3 T3

Male Female Male Female Female Female Female Male Female

59 80 68 82 68 74 70 82 84

TCGA-AA-A02WTCGA-AA-A02YTCGA-AA-A03FTCGA-AA-A03JTCGA-AA-A004TCGA-AA-A010TCGA-AA-A017TCGA-AA-A022TCGA-AA-A024

T2 T2 T3 T2 T3 T4 T3 T4 T3

Female Male Female Female Male Female Female Female Male

73 73 90 65 76 46 57 88 81

TCGA-AA-A029TCGA-AA-3488TCGA-AA-3489TCGA-AA-3492TCGA-AA-3494TCGA-AA-3495TCGA-AA-3496TCGA-AA-3502TCGA-AA-3506

T3 T3 T3 T3 T3 T2 T3 T2 T2

Male Male Male Female Male Male Female Male Male

67 58 75 90 55 79 83 73 77

TCGA-AA-3510TCGA-AA-3511TCGA-AA-3514TCGA-AA-3516TCGA-AA-3517TCGA-AA-3518TCGA-AA-3519TCGA-AA-3520TCGA-AA-3521

T3 T4 T2 T3 T3 T3 T3 T3 T3

Male Male Female Female Male Female Male Female Male

70 64 81 74 60 81 63 86 87


T3 T3 T3 T2 T3 T3 T2 T3 T3

Male Male Male Male Female Female Male Female Male

67 85 90 57 90 78 80 75 63


T3 T2 T3 T2 T2 T3 T2 T3 T2

Female Female Male Male Male Female Male Male Female

78 54 69 84 68 71 69 85 61


T3 T3 T2 T2 T3 T3 T3 T3 T3

Female Female Male Male Female Male Male Male Female

62 81 78 70 72 72 82 68 51


T4 T3 T3 T2 T3 T3 T3 T2 T3

Female Male Male Female Female Female Male Female Male

80 42 68 36 90 53 84 60 59


T3 T4 T3 T3 T3 T4 T3 T3 T3

Female Female Male Male Female Female Female Female Male

77 65 69 80 47 77 63 75 77


T3 T3 T3 T3 T3 T3 T3 T3 T3

Female Male Male Male Female Female Female Female Female

80 65 68 77 84 82 85 78 41


T2 T3 T3 T3 T3 T2 T3 T3 T3

Female Male Female Male Male Male Female Female Female

81 66 63 67 66 51 78 86 74


T3 T2 T3 T3 T2 T2 T3 T2 T3

Female Male Male Male Female Male Male Male Female

82 74 74 88 71 72 59 67 53


T3 T2 T3 T4 T3 T4 T1 T1 T3

Male Female Male Male Female Male Female Female Male

71 78 74 76 71 45 78 83 66


T3 T4 T4 T3 T3 T3 T2 T3 T3

Male Female Female Female Female Male Male Male Female

83 84 60 87 79 68 38 65 89


T2 T3 T3 T4 T2 T2 T2 T3 T3

Female Male Male Male Male Male Male Male Male

55 58 72 69 80 70 65 84 75

TCGA-AA-3984TCGA-AA-3986TCGA-AA-3989TCGA-AA-3994TCGA-AD-A5EJTCGA-AD-A5EKTCGA-AD-5900TCGA-AD-6548TCGA-AD-6888

T3 T2 T3 T3 T3 T2 T2 T2 T3

Female Male Male Male Female Male Male Female Male

61 73 84 69 74 51 67 81 73

TCGA-AD-6889TCGA-AD-6890TCGA-AD-6895TCGA-AD-6899TCGA-AD-6901TCGA-AD-6963TCGA-AD-6964TCGA-AD-6965TCGA-AF-A56K

T3 T1 T3 T4a T3 T3 T4a T4a T3

Male Male Male Male Male Male Male Male Male

76 65 84 84 78 58 58 62 56

TCGA-AF-A56LTCGA-AF-A56NTCGA-AF-2687TCGA-AF-2689TCGA-AF-2690

T3 T3 T3 T3 T3

Female Female Male Female Female

48 47 57 41 76

Documents

Query results of copy number alternations compared with …fp.amegroups.cn/cms/b1237ee51a6b268f9c8278f795f21f71/tcr... · 2020-03-16 · Query results of copy number alternations