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Quantifying Nuclear Movement in Wild Type and mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore

Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

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Page 1: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

Quantifying Nuclear Movement in Wild Type and mmb1-delta and klp4-delta Fission Yeast Cells.

IISc Bangalore

Page 2: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

BackgroundFission yeast typically divide symmetrically after a period of growth.

Microtubules contribute to this process through positioning the nucleus at the

center of the cell, which becomes the site of cell division.

http://www.labex-celtisphybio.fr/cytoskeleton-architecture-and-cellular-morphogenesis/

Page 3: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

BackgroundMicrotubule pushing:

Growth and catastrophe of

microtubules helps to center the

nucleus of the cell.

Tran PT, Marsh L, Doye V, Inoué S, Chang F. A mechanism for nuclearpositioning in fission yeast based on microtubule pushing. J Cell Biol.2001;153(2):397-411. doi:10.1083/jcb.153.2.397.

Page 4: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

BackgroundMicrotubules and

mitochondria are

associated through

the protein mmb1

during interphase.

During mitosis

mitochondria

undergo fission by

dnm1.

Mehta K, Chug MK, Jhunjhunwala S, Ananthanarayanan V. Microtubuledynamics regulates mitochondrial fission. bioRxiv. 2017.doi:10.1101/178913.

Page 5: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

Klp4Kinesin protein that stabilizes microtubules

Deletion leads to short microtubules

Page 6: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

MethodsYeast strain with microtubules tagged with GFP with the nucleus stained with hoechst

Page 7: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

MethodsYeast Strain with microtubules tagged with mcherry with the nucleus stained with

hoechst

Page 8: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

Weak mcherry signal in stained cells

Page 9: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

Attempted Protocols● Stain concentration: 2, 5, and 10 microgram/mL hoechst stain

● Time: 15 and 20 minutes of staining

● Location: staining in the hood, staining in the incubator

● Imaging: confocal dishes, slides, and slides with agarose pads

● Imaging media: EMM+N, EMM+N and amino acids, hoechst stain

● Cells: grown overnight in YEA, taken directly from plate

Optimized protocol: 2 microgram/mL stain for 15 minutes in the incubator, image on

slides with agarose pads in EMM+N and amino acids, with cells taken directly from

the plate.

Page 10: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

MethodsUnable to visualize microtubules and nucleus simultaneously

Future possibility:

Yeast strain with the microtubules tagged with mcherry and the ER tagged with GFP

Requires cross

Page 11: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

The Lab

Page 12: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

Exploring Bangalore

Page 13: Quantifying Nuclear Movement in Wild Type and mmb1-delta ... · mmb1-delta and klp4-delta Fission Yeast Cells. IISc Bangalore. Background Fission yeast typically divide symmetrically

AcknowledgementsThank you to Vaishnavi, Leeba, all the lab, and the SN Bose Program!