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Probing Question • Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

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Page 1: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Probing Question

• Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Page 2: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Biotechnology

• Application of biological science to solving practical problems

• Two Methods:I. Breeding Strategies A. Selective Breeding/Artificial Selection

- indirect manipulation of DNA- select parents with desirable traits

- goal-directed: create “better” individual- oldest way to improve a species- breed

Page 3: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

The Evolution of Corn

• 10,000 years ago ancient farmers in Mexico choose which kernels (seeds) to plant

• Noted not all plants were the same- size, taste of kernels, ease to grind

• Over time Maize cobs became larger, more rows of kernels

Maize cobs uncovered by archaeologists show the evolution of modern maize over thousands of years of selective breeding. Even the oldest archaeological samples bear an unmistakable resemblance to modern maize.

Photo © Robert S. Peabody Museum of Archaeology, Phillips Academy, Andover, Massachusetts. All Rights Reserved.

Page 4: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Genetic Archaeology

• Corn’s wild ancestor is a grass called teosinte

Page 5: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?
Page 6: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?
Page 8: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Types of Selective Breeding1. Inbreeding

- to maintain traits in a population

- mate parents with similar genomes

- keeps desirable traits, but increases risks for undesirable mutations

2. Outbreeding (Hybridization)

- crossing of distantly related organisms

- offspring often sterile but hardier (hybrid vigor)

- in nature hybrids can often survive where parents cannot; they find a different niche

Page 9: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Mule

Male lion and tigress = ligerMale tiger and lioness = tiglon

Page 10: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Sea Life Park Hawaii RECOMMEND

A wholphin (dolphin-false killer whale) named Kekaimalu.

Page 11: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

A Fullblood Beefalo is an animal containing 3/8 American Bison and 5/8 domestic cattle. This combination produces a fertile animal which develops rapidly and provides excellent table meat.American Beefalo cattle combine the hardiness of the Bison with the temperament of bovine breeds. The bovine bloodlines can be of any breed enabling a Beefalo breeder to select the bovine genetics best fitted to his individual program.

Page 12: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Broccoflower

Page 13: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Killed by a hunter last month in the Canadian Arctic, this male bear was confirmed via DNA analysis last week to be half grizzly, half polar bear. John Roach for National Geographic News

May 16, 2006

Photograph from Canadian Wildlife Service/AP

“Some biologists estimate that as many as 10 percent of animal species andup to 25 percent of plant species may occasionally breed with another species.” NYT 9.14.10

What is the biological species concept?If hybrid is fertile and survives…

Page 14: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

B. Other “Breeding” Options1. Use of Mutagens (Mutagenesis)- radiations or chemicals to cause mutations- used in bacteria2. Induced Polyploidy- chemical which causes cells to have extra set of

chromosomes- fruits, flowers, and plants larger- *some cases such as plants and lower animals natural occurrence - lethal for human zygote

Page 15: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

II. Genetic Engineering- direct manipulation of DNA- cutting and pasting of genes- design organisms or create transgenic organisms- transgenic organism- organism with foreign DNA or rDNA- recombinant DNA (rDNA)- DNA molecule made of DNA fragments from two different species (ex. Bacteria and human)

- vector- agent/vehicle used to transport rDNA or gene of interest into organisms

Page 16: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Using recombinant DNA technology we can make

transgenic…

• Bacteria

• Plants

• Animals

How do you feel about genetically altering a species from its normal state?What useful applications of this biotechnology exist?

Page 17: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Which transgenic species will prevail as the leader in biosteel production?

SPIDERGOAT?

Page 18: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

STEELYSILKWORM?

Page 19: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Steps involved in creating spider-goats:

1. Identify the genes associated with “silk”production.

2. Genetically engineer (clone) the genes

3. Implant genes into embryo of the goat

Page 20: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Figure 6.28Microinjection of DNACloned plasmid DNA is being microinjected into the male pronucleus of a fertilized mouse egg.From: Section 6.3, Manipulating the Genes of Eukaryotes

Page 21: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

A DNA construct can be injected into 0.5-day-old fertilized embryos to produce transgenic mice containing the DNA in every cell. The DNA construct typically consists of a gene of interest that is expressed in a certain range of tissues. The resulting mice are mated and the DNA construct is then transmitted to offspring.

Page 22: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Rat Growth Hormone-Metallothionein Gene Construct. The gene for rat growth hormone (shown in yellow) was inserted into a plasmid next to the metallothionein promoter, which is activated by the addition of heavy metals, such as cadmium ion.

http://www.ncbi.nlm.nih.gov/books/NBK22390/

Page 23: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Spider-goats continued…

4. Lactation

5. Distillation

6. Purification

7. Spinning

8. Stretch the fiber

Page 24: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

In groups…

• Discuss questions and record your answers your notebook.

• Add the following question, “Is silk production in goats an acceptable use of biotechnology?”

Page 25: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

As you watch each of the following record your thoughts

and/or questions.

Page 26: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Human anti-clotting Protein produced in the goat’s milk

Page 27: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Engineered mice with green fluorescent protein

Page 28: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Engineering rainbow trout to increase their muscle mass

Page 29: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?
Page 30: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Are these instances acceptable uses of biotechnology?

Page 31: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Biomimicry- the study of genetically manipulating one species to have a specific

trait of another species.• What are the various uses for goat silk that were

described in the video? Explain how the silk would be effective for each use?

• Why is it not practical to use spider farms to harvest the silk fibers?

• Is silk production in goats an acceptable use of biotechnology?

• Has your opinion of genetically altering a species changed?

Page 32: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

What information needs to be known up front?

Page 33: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Transgenic Animals

Recombinant DNA can be introduced by:

1.DNA microinjection

2.Retrovirus mediated gene transfer

Page 34: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?
Page 35: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Steps to Make a Transgenic Bacterium

1. DNA Extraction- get genome from organism containing gene of interest

2. Splice gene of interest from genome using a restriction enzyme(RE)

- RE, chemical that cuts DNA at a recognition site(short sequence of bases)

3. Splice bacterial plasmid using same RE

- plasmid: circular piece of DNA in bacteria video clip

Page 36: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Plasmid may not

be exactly circular

Page 37: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

http://www.ncbi.nlm.nih.gov/books/NBK22390/

Page 38: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Making recombinant plasmid(DNA)

Red= bacteria DNABlue= human insulin gene

Page 39: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

- Details making recombinant plasmid (DNA)

a. Due to sticky ends, gene can be spliced in

b. DNA ligase help nuclotides bond

c. Combined DNA called rDNA or chimera

d. Put rDNA back into bacteria and grow in culture

Page 40: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Insertion of Gene of Interest into Plasmid

                                                                        

Page 41: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Using rDNA plasmid to create a transgenic plant

Page 42: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

A virus is another biological vector also used to deliver genes

Page 43: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

IF you had to genetically engineer a bacteria to to transport a gene into a tobacco plant, which

would you choose?

Mechanical Vectors:

1. Gene Gun

2. Pipette

http://www.agriculture.purdue.edu/agbiotech/images/Genegun1.html

Page 44: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

Transgenic Organisms

GOAT GOODS. A transgenic goat named Artemis produces in her milk a human-breast–milk compound called lysozyme. Lysozyme destroys bacteria by drilling through their cell walls.E. Scharfen

Page 45: Probing Question Throughout history humans were not always able to extract DNA and physically manipulate it. How did people in past overcome this obstacle?

3. Gel Electrophoresisa. Method of separating DNA fragments according to their size

b. DNA slightly (-) charge, will run towards (+) charge

c. Shorter DNA fragments will move farthest

d. Check to see if DNA was cut by RE