8
Peripheral Blood Karyotyping Solutions

Peripheral Blood Karyotyping Solutions HiKaryoXL™ Karyotyping Reagents PHA-P Phytohemagglutinin (PHA-P) is a lectin isolated from red kidney beans Phaseolus vulgaris. It is purified

  • Upload
    others

  • View
    5

  • Download
    0

Embed Size (px)

Citation preview

  • HiMedia Laboratories Pvt. Ltd.www.himedialabs.com

    - CORPORATE OFFICE -A-516, Swastik Disha Business Park, Via Vadhani Indl Est, LBS Marg,

    Mumbai - 400 086, India.Tel : +91-22-6147 1919 / 2500 3747 | Fax : +91-22-6147 1920 / 2500 5764

    Email : [email protected], [email protected]

    - OVERSEAS OFFICES -

    USA & CanadaHiMedia Laboratories LLC, 107 W Dorothys Way, Lincoln University, West Chester,

    Pennsylvania 19352, USA.Tel : +1-484-734-4401 | Fax : +1-484-734-4402

    Email : [email protected]

    EuropeHiMedia Laboratories GmbH, Marie-Curie-Str. 3, 64683,

    Einhausen, Germany.Tel : +49 6251 989 24 26 | Fax : +49 6251 989 24 27

    Email : [email protected]

    Lite

    ratu

    re C

    ode

    : TL2

    35_2

    / Pe

    riphe

    ral B

    lood

    Kar

    yoty

    ping

    Sol

    utio

    ns B

    roch

    ure

    / 071

    8

    Peripheral Blood Karyotyping Solutions

  • Cytogenetic analysis involves six principal steps, culturing cells, metaphase arrest, harvest of metaphase chromosomes, chromosome preparation, banding and staining using a special protocol, and analysis by light microscopy or karyotype assisted computer analysis. The discovery that colchicine (or Colcemid) pretreatment resulted in mitotic arrest and that treatment of arrested cells with a hypotonic solution improved the yield and quality of metaphases spreads.

    Cytogenetic study is considered a mandatory investigation in newly diagnosed leukemia owing to its usefulness in disease diagnosis, classification and prognostication. The vast majority of recurrent chromosomal rearrangements associated with leukemia were originally identified by cytogenetic analysis, which remains the gold standard laboratory test since it provides a comprehensive analysis for abnormality on the entire genome.

    Although other cells of the body can be cultured for cytogenetic studies, peripheral blood cells are used most often due to several advantages such as easy collection procedure and lesser testing time (3 days).

    Our objective is to make quality diagnostic tools for making your cytogenetic analysis convenient, easy and accurate.

    HiKaryoXL™ Karyotyping Media HiKaryoXL™ media are a series of ready-to-use media developed for short term in vitro culture of peripheral blood lymphocytes for cytogenetic studies. These media are based on either RPMI 1640 or Nutrient Mixture F-10 Ham and are further supplemented with L-Glutamine, FBS, Penicillin, Streptomycin and Sodium bicarbonate. They are supplied with or without PHA-M to suit the convenience of users.

    1

    It’s All About Understanding GeneticsQuality controlEvery lot of Medium & reagent is performance tested to ensure consistence, accuracy, reproducibility and superior performance.

    Performance TestMitotic index : Calculated as percentage of cells arrested at metaphase

    Sterility TestMycoplasma : Detection by PCR

    Bacterial, Yeast and Fungi : As per current edition of USP

    Physicochemical testspH and Osmolality

    Lot-to-lot consistencey assured

    Manufactured under GMP, ISO 13485 and ISO 9001 certified facility

    CE Marked for IVD (98/79/EC)

    Avoid repeated Freeze-thaw Use 10ml convenient pack

  • 2

    Mitotic StimulatorsLymphocytes from peripheral blood are mitotically inactive and have to be stimulated with a mitogen. In presence of a mitogen, small lymphocytes undergo a process known as transformation, in which the cell enlarges and the staining properties of the nucleus change. Such a transformed cell is capable of cell division.

    Lymphocytes in purified preparation or in whole blood can be stimulated with different mitogens such as Phytohemagglutinin (PHA), Concanavalin A, Pokeweed mitogen (PWM) etc. Phytohemagglutinin (PHA) and Concanavalin A affect primarily the T cell population while Pokeweed mitogen (PWM) affects the B cell population.

    HiKaryoXL™ PHA-M SolutionThe most common mitogen used for the stimulation of cell division in lymphocyte cultures is Phytohemagglutinin (PHA). PHA causes small T lymphocytes to transform to lymphoblasts and enter mitosis. PHA acts by causing a marked increase in RNA synthesis within the first 24 hours. Lymphocytes produce interleukin-2 (IL-2) or lymphocyte growth factor which further stimulates mitosis. DNA synthesis is low during the first 30 hours of culture but it increases steadily between 30 and 60 hours.

    The use of PHA-M as a mitogen helps to obtain lymphocyte that are actively dividing, thus yielding analyzable mitotic chromosome spreads. PHA-M is a lectin extracted from red kidney bean Phaseolus vulgaris. The protein consists of two subunits, a leucoagglutininin (PHA-L) and an erythroagglutinin (PHA-E). PHA-M is the mucoprotein form and is most commonly used in cytogenetics laboratories.

    Product Name Code Packing

    HiKaryoXL™ PHA-M Solution w/ 0.1 mg per ml PHA-M in sterile tissue culture grade water

    TCL061-10ML 10ml 5x10ml

    HiKaryoXL™ PHA-M Solution w/ 1 mg per ml PHA-M in sterile tissue culture grade water

    TCL071-10ML 10ml 5x10ml

    PHA-M (Phytohemagglutinin-M) Cell Culture Tested

    TC209-10MG TC209-25MG TC209-4X25MG

    10mg 25mg 4x25mg

    HiKaryoXL™ Karyotyping Reagents PHA-PPhytohemagglutinin (PHA-P) is a lectin isolated from red kidney beans Phaseolus vulgaris. It is purified by affinity chromatography. PHA-P has a molecular weight of 115kDa. The lectin PHA-P consists of five glycoproteins that are tetrameric structures made up of two subunits PHA-E (erythroagglutinin) and PHA-L (leucoagglutinin). PHA-E has a low mitogenic activity and a high erythroagglutination activity whereas PHA-L has a high mitogenic and leucoagglutinating activity, but very low erythroagglutinating activity. PHA-E is not blood group specific but agglutination can be inhibited by certain oligosaccharides.

    Product Name Code Packing

    PHA-P (Phytohemagglutinin-P) Cell Culture Tested

    TC226-5MG TC226-5X5MG

    5mg 5x5mg

    Concanavalin AConcanavalin A (Con A) is a glycoprotein isolated from Jack bean (Canavalia ensiformis). Con A specifically binds with specific terminal sugar residues like a-mannose and a-galactose structures found in sugars, glycoproteins and glycolipids. It agglutinates red blood cells and complexes with blood group substances, immunoglobulin, glycopeptides and carcinoembryonic antigens. Hence it is widely used in hormone receptor studies, mitogenic assays and for characterizing normal and malignant cells. It is also used to initiate mitogenesis in T lymphocytes by stimulating the energy metabolism of thymocytes.

    In neutral and alkaline solutions, concanavalin A exists as a tetramer consisting of 4 subunits of 26.5kDa each. In acidic solutions (pH below 5.0), concanavalin A exists as a dimer.

    Product Name Code Packing

    Concanavalin A Cell Culture Tested

    TC220-25MG TC220-100MG

    25mg 100mg

  • HiKaryoXL™ Colcemid® SolutionColcemid® also known as demecolcine, is related to colchicine but it is less toxic. It depolymerises microtubules and limits microtubule formation (inactivates spindle fibre formation), thus arresting cells in metaphase and allowing cell harvest and karyotyping to be performed.

    Product Name Code Packing

    HiKaryoXL™ Colcemid® Solution w/ 10µg per ml Colcemid in Hanks' Balanced salt solution

    TCL074-20ML TCL074-100ML

    20ml 100ml

    HiKaryoXL™ Colcemid® Solution w/ 10µg per ml Colcemid in Phosphate Buffered Saline

    TCL133-20ML TCL133-100ML

    20ml 100ml

    Colcemid® Demecolcine Cell Culture Tested

    TC566-5MG TC566-10MG TC566-50MG

    5mg 10mg 50mg

    Colcemid® is a registered trademark of Ciba - Giegy Corp.

    Stains

    Giemsa StainG-banding is a technique used in cytogenetics to produce a visible karyotype by staining condensed chromosomes. Banding can be used to identify chromosomal abnormalities because there is a unique pattern of light and dark bands for each chromosome. The metaphase chromosomes are treated with trypsin and stained with Giemsa.

    Product Name Code Packing

    Giemsa Stain Solution TCL083-100ML TCL083-500ML

    100ml 500ml

    Giemsa stain Cell Culture Tested

    TC232-5G TC232-25G

    5gm 25gm

    Mitotic InhibitorsProper techniques for harvesting dividing cells and preparing slides for chromosomal analysis are critical for attaining the quality needed for correct karyotype analysis. Chromosomes become structurally and numerically distinct only during the metaphase stage of cell division. Mitotic inhibitors like Colchicine and Colcemid are used to collect the cells at this stage for cytogenetic analysis. Mitotic inhibitors disrupt mitotic spindle fibers and free the chromosomes from metaphase plate, accounting them to spread out inside the cell. The lack of spindle fibers also blocks the anaphase so the mitotic index is effectively increased. Mitotic inhibitors also cause chromosome contraction. The degree to which chromosomes contract depends on the concentration and also the time that the cells are exposed to the mitotic inhibitors.

    HiKaryoXL™ Colchicine SolutionColchicine, an alkaloid isolated from the plant Colchicum autumnale, is a microtubule-depolymerizing agent that has been used to arrest cells at metaphase. Arresting of cells in metaphase allows an increased yield of mitotic cells for analysis. Colchicine inhibits microtubule polymerization by binding to tubulin, one of the main constituents of microtubules. Availability of tubulin is essential to mitosis, and therefore colchicine effectively functions as a “mitotic poison” or spindle poison.

    Product Name Code Packing

    HiKaryoXL™ Colchicine Solution w/ 10µg per ml Colchicine in Phosphate Buffered Saline

    TCL062-20ML 20ml

    Colchicine Cell Culture Tested

    TC030-500MG TC030-1G TC030-10G

    500mg 1gm 10gm

    3

  • 4

    Related Reagents

    Potassium Chloride Solution, 0.075MA hypotonic solution of potassium chloride is used in blood lymphocyte chromosome preparation. The hypotonic treatment causes the cells to swell and aids in the release of the intact chromosomes. The KCl hypotonic treatment is important for swelling of the cells and adequate spreading of chromosomes on the slide.

    Product Name Code Packing

    Potassium chloride Solution, 0.075M

    TCL040-100ML 100ml

    Trypsin-EDTA SolutionsG-banding requires pretreatment of chromosomes with trypsin to partially digest the chromosomes which are then stained with Giemsa stain. Each homologous chromosome pair has a unique pattern of G-bands, enabling recognition of particular chromosomes.

    Product Name Code Packing

    Trypsin-EDTA Solution 10X w/ 2.5% Trypsin (1:250), 0.2% EDTA in 0.85% normal saline w/o Phenol red

    TCL070-100ML TCL070-500ML

    100ml 5x100ml 2x500ml

    Trypsin Solution for G-Banding w/ 0.025% Trypsin in Dulbecco's Phosphate Buffered Saline

    TCL122-100ML 100ml 5x100ml

    Gurr Buffer SolutionGurr buffer is a used for G-banding of chromosomes by Giemsa staining for cytogenetic analysis.

    Product Name Code Packing

    Gurr Buffer Solution pH 6.8 TL1139-500ML 500ml

    Hoechst 33258 & Hoechst 33342Hoechst, a bis-benzimidazole derivative compound, is a DNA intercalator. It preferentially binds to adenine-thymine (A-T) regions of DNA. It is excited by ultraviolet light at around 350 nm and emit blue/cyan fluorescence around an emission maximum at 461 nm. Hoechst stain may be used on live or fixed cells. It is also used to stain the metaphase chromosomes with much brighter fluorescence and different banding pattern. Hoechst stain shows minimal background fluorescence and slow quenching. Ability of Hoechst 33342 to permeate the cells is about 10 times higher than Hoechst 33258.

    Product Name Code Packing

    Bisbenzimide (Hoechst 33258) Cell Culture Tested

    TC225-25MG TC225-100MG

    25mg 100mg

    PHA-P (Phytohemagglutinin-P) Cell Culture Tested

    TC226-5MG TC226-5X5MG

    5mg 5x5mg

    DAPI- 4’, 6-Diamidino-2-phenylindoleDAPI (diamidino-2-phenylindole) is a fluorescent stain that binds strongly to the DNA. It is rapidly taken up by the cellular DNA because of its high cell permeability. It selectively binds to the minor groove of double stranded DNA. The excitation maximum for DAPI bound to dsDNA is 358 nm, and the emission maximum is 461 nm. DAPI can be used for both fixed and live cell staining, though the concentration of DAPI needed for live cell staining is generally much higher than for fixed cells.

    Product Name Code Packing

    DAPI dihydrochloride (4’,6-Diamidino-2-phenylindole dihydrochloride) Cell Culture Tested

    TC229-5MG TC229-10MG

    5mg 10mg

  • 5

    Troubleshooting

    Problem Possible cause Solution

    Chromosome quality

    Contracted chromosomes Prolonged treatment with mitotic inhibitorTreat the culture with mitotic inhibitor for recommended time

    Chromosomes not well spread across the slide/ overlapping chromosomes

    Non-uniform drying of the slide Avoid blowing, dropping from height & flaming

    Cell density too highDilute the suspension with fixative and repeat dropping

    Scattered chromosomes Cells burst open during slide makingEnsure that the addition of hypotonic solution and fixative is performed gently

    Slide quality

    Particulate matter and debris appearing on slide

    Cell clumps and debris present

    Mix the cell pellet uniformly and gently to break the clumps and repeat dropping

    If clumps do not break, allow the clumps and debris to settle, remove cell suspension to a separate tube and repeat dropping

    Procedural problems

    Dark brown irreversible clumping of cells

    Harsh addition of hypotonic solution and / or fixativeEnsure gentle addition of hypotonic solution and fixative

    Cell growth

    No cell growthInappropriate growth conditions

    Check temperature and percentage of CO2 in the incubator

    Blood sample is not fresh Always use fresh blood

    G-Banding

    No G-bands seen on chromosomes

    Insufficient trypsin treatmentOptimize the duration of trypsin exposure to get optimum banding

    Prolonged stainingDO NOT expose the slide to Giemsa stain for longer duration. Optimize the timeof exposure to Giemsa stain

    Fuzzy G-bands banding Over trypsinization Optimize the duration of trypsin exposure

  • 6

    Blood Collection

    Culture

    Harvest

    Analysis

    Peripheral blood lymphocytes were cultured in 3 different lots of HiKaryoXL™ Medium (product code: AL249A). After 72 hours, karyotyping procedure was performed. Slides were stained using Giemsa stain and number of mitotic cells /slide were counted.

    Chromosome spread from normal periferal blood cells cultured in HiMedia's HiKaryoXL™ Media for 72 hours at 100X magnification.

    Product Name Code Packing

    Media containing PHA-M as mitogen

    HiKaryoXL™ RPMI Medium w/ L-Glutamine, FBS, PHA-M, Penicillin, Streptomycin and Sodium bicarbonate

    AL165A-10ML AL165A-100ML

    50x10ml 5x100ml

    HiKaryoXL™ Nutrient Mixture F10 Medium w/ L-Glutamine, FBS, PHA-M, Penicillin, Streptomycin and Sodium bicarbonate

    AL169A-10ML AL169A-100ML

    50x10ml 5x100ml

    Media containing PHA-P as mitogen

    HiKaryoXL™ RPMI Medium w/ L-Glutamine, FBS, PHA-P, Penicillin, Streptomycin and Sodium bicarbonate

    AL249A-10ML AL249A-100ML

    50x10ml 5x100ml

    Media without mitogen

    HiKaryoXL™ RPMI Medium w/ L-Glutamine, FBS, Penicillin, Streptomycin and Sodium bicarbonate w/o PHA-M

    AL173A-10ML AL173A-100ML

    50x10ml 5x100ml

    HiKaryoXL™ Nutrient Mixture F-10 Ham Medium w/ L-Glutamine, FBS, Penicillin, Streptomycin and Sodium bicarbonate w/o PHA-M

    AL185A-100ML 5x100ml

    457

    LOT 1

    Num

    ber o

    f mito

    tic c

    ells

    /slid

    e

    Lot to lot consistency of HikaryoXL™ RPMI Medium (AL249A)

    LOT 2 LOT 3

    369429

  • HiMedia Laboratories Pvt. Ltd.www.himedialabs.com

    - CORPORATE OFFICE -A-516, Swastik Disha Business Park, Via Vadhani Indl Est, LBS Marg,

    Mumbai - 400 086, India.Tel : +91-22-6147 1919 / 2500 3747 | Fax : +91-22-6147 1920 / 2500 5764

    Email : [email protected], [email protected]

    - OVERSEAS OFFICES -

    USA & CanadaHiMedia Laboratories LLC, 107 W Dorothys Way, Lincoln University, West Chester,

    Pennsylvania 19352, USA.Tel : +1-484-734-4401 | Fax : +1-484-734-4402

    Email : [email protected]

    EuropeHiMedia Laboratories GmbH, Marie-Curie-Str. 3, 64683,

    Einhausen, Germany.Tel : +49 6251 989 24 26 | Fax : +49 6251 989 24 27

    Email : [email protected]

    Lite

    ratu

    re C

    ode

    : TL2

    35_2

    / Pe

    riphe

    ral B

    lood

    Kar

    yoty

    ping

    Sol

    utio

    ns B

    roch

    ure

    / 071

    8