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Patrick An Introduction to Medicinal Chemistry 3/e Chapter 9 DRUG DISCOVERY: FINDING A LEAD Part 2: Section 9.4 (Lead compounds from the natural world). Contents Part 2: Section 9.4 Lead compounds from the natural world 4.The Lead Compound 4.1. Sources of Lead Compounds - PowerPoint PPT Presentation
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Patrick Patrick An Introduction to Medicinal An Introduction to Medicinal
ChemistryChemistry 3/e 3/e
Chapter 9Chapter 9
DRUG DISCOVERY: DRUG DISCOVERY: FINDING A LEADFINDING A LEAD
Part 2: Section 9.4 Part 2: Section 9.4 (Lead compounds from the natural world)(Lead compounds from the natural world)
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ContentsContents
Part 2: Section 9.4 Lead compounds from the natural world
4. The Lead Compound 4.1. Sources of Lead Compounds 4.2. Identification of Lead Compounds 4.3. Lead Compounds from the Natural World (21 slides)
- Plant Extracts (4 slides)- Plants and Ancient Records (9 slides)- Herbal Remedies of Olde- Venoms and Toxins (4 slides)- Endogenous Compounds (3 Slides)
[25 slides]
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IntroductionIntroduction
4 The Lead Compound4 The Lead Compound
• A compound demonstrating a property likely to be A compound demonstrating a property likely to be therapeutically usefultherapeutically useful
• The level of activity and target selectivity are not crucialThe level of activity and target selectivity are not crucial• Used as the starting point for drug design and developmentUsed as the starting point for drug design and development• Found by design (molecular modelling or NMR) or by Found by design (molecular modelling or NMR) or by
screening compounds (natural or synthetic)screening compounds (natural or synthetic)• Need to identify a suitable test in order to find a lead Need to identify a suitable test in order to find a lead
compoundcompound• Active Principle - a compound that is isolated from a natural Active Principle - a compound that is isolated from a natural
extract and which is principally responsible for the extract’s extract and which is principally responsible for the extract’s pharmacological activity. Often used as a lead compound. pharmacological activity. Often used as a lead compound.
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4.1 Sources of Lead Compounds4.1 Sources of Lead Compounds
A) The Natural WorldA) The Natural World
B) The Synthetic WorldB) The Synthetic World
C) The Virtual WorldC) The Virtual World
Plantlife Plantlife (flowers, trees, bushes)(flowers, trees, bushes)
Micro-organisms Micro-organisms (bacteria, fungi)(bacteria, fungi)
Animal life Animal life (frogs, snakes, scorpions)(frogs, snakes, scorpions)
Biochemicals Biochemicals (Neurotransmitters, hormones)(Neurotransmitters, hormones)
Marine chemistry Marine chemistry (corals, bacteria, fish etc)(corals, bacteria, fish etc)
Chemical synthesis (traditional)Chemical synthesis (traditional)Combinatorial synthesisCombinatorial synthesis
Computer aided drug designComputer aided drug design
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4.2 Identification of Lead Compounds4.2 Identification of Lead Compounds
A) Isolation and purificationA) Isolation and purificationsolvent-solvent extractionsolvent-solvent extractionchromatographychromatographycrystallisationcrystallisation
distillationdistillation
B) Structure determinationB) Structure determinationelemental analysiselemental analysismolecular weightmolecular weightmass spectrummass spectruminfra redinfra redultra violetultra violetnmr (nmr (11H, H, 1313C, C, 22D)D)X-ray crystallographyX-ray crystallography
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANT EXTRACTSPLANT EXTRACTS
1©POPPY CAPSULEPOPPY CAPSULE
MORPHINEMORPHINE
4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANT EXTRACTSPLANT EXTRACTS
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANT EXTRACTSPLANT EXTRACTS
• OPIUMOPIUM - Morphine- Morphine
• CINCHONA BARKCINCHONA BARK - Quinine- Quinine
• YEW TREEYEW TREE - Taxol- Taxol
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANT EXTRACTSPLANT EXTRACTS
WILLOW TREE - SALICYLIC ACIDWILLOW TREE - SALICYLIC ACID
COCA BUSH - COCAINECOCA BUSH - COCAINE
AspirinAspirin
ProcaineProcaine
OH
O OHAceticanhydride O
O OH
CH3
O
NMe
O
H
H
CO2Me
CO
OC
O
N
NH2
CH3
CH3
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANTS AND ANCIENT RECORDSPLANTS AND ANCIENT RECORDS
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O
O
O
CH3
H
H3CO
O
CH3
H
H
H
ARTEMISININARTEMISININ
4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANTS AND ANCIENT RECORDSPLANTS AND ANCIENT RECORDS
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O
O
O
CH3
H
H3CO
O
CH3
H
H
H
ARTEMISININARTEMISININ
4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANTS AND ANCIENT RECORDSPLANTS AND ANCIENT RECORDS
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O
O
O
CH3
H
H3CO
O
CH3
H
H
H
ARTEMISININARTEMISININ
4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANTS AND ANCIENT RECORDSPLANTS AND ANCIENT RECORDS
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Fe
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World PLANTS AND ANCIENT RECORDSPLANTS AND ANCIENT RECORDS
THE BEATONS OF PENNYCROSSTHE BEATONS OF PENNYCROSS
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CURE for EPILEPSYCURE for EPILEPSY
Heat a cauldron of wateruntil warm to the touch
Add a liberal sprinklingof juicy spidersProduce one pedigree dogFlavour with essenceof dog turdSimmer for 20 minutesthen enjoy
THE BEATONS OF PENNYCROSSTHE BEATONS OF PENNYCROSS
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World HERBAL REMEDIES OF OLDEHERBAL REMEDIES OF OLDE
Majority may have worked through a placebo effectMajority may have worked through a placebo effect
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World VENOMS AND TOXINSVENOMS AND TOXINS
CaptoprilCaptopril(anti-hypertensive)(anti-hypertensive)
H2N CH C
CH2
O
CH2
C
OH
O
NH
CH C
CH2
O
HN
N
C
O
NH
CH C
CH2
O
CH2
CH2
NH
C
NH2
NH
N
C
O
NH
CH C
CH2
O
CH2
C
NH2
O
HN CH C
CH
O
CH3
CH2
CH3
N
C
O
N
C OH
O
CH3
C
O
N
C OHO
HS
TeprotideTeprotide
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World VENOMS AND TOXINSVENOMS AND TOXINS
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NCH3
MeO
HO
OH
CH3
NH3C
OMe
O
H3C
HO
H
TubocurarineTubocurarine(from curare)(from curare)
4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World VENOMS AND TOXINSVENOMS AND TOXINS
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NCH3
MeO
HO
OH
CH3
NH3C
OMe
O
H3C
HO
H
NO
C
O
(CH2)5 OC
OMeO
MeO
OMe
OMe
N
OMe
OMe
OMe
MeO
CH3 H
AtracuriumAtracurium(Neuromuscular blocker)(Neuromuscular blocker)
TubocurarineTubocurarine(from curare)(from curare)
4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World VENOMS AND TOXINSVENOMS AND TOXINS
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World ENDOGENOUS COMPOUNDSENDOGENOUS COMPOUNDS
NATURAL LIGANDS FOR RECEPTORSNATURAL LIGANDS FOR RECEPTORS
HO
HOADRENALINE
HN
Me
OH
HO
HO
OH
SALBUTAMOL
HN
AgonistAgonist
NH2
NH
HO
5-HYDROXYTRYPTAMINE
NMe2
NH
SUMATRIPTAN
SMeHN
O OAgonistAgonist
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World ENDOGENOUS COMPOUNDSENDOGENOUS COMPOUNDS
NATURAL LIGANDS FOR RECEPTORSNATURAL LIGANDS FOR RECEPTORS
O NH
OH
PROPRANOLOL
AntagonistAntagonistHO
HOADRENALINE
HN
Me
OH
HNN
Me
SHN NHMe
CNCIMETIDINE
HNN
NH2
HISTAMINE AntagonistAntagonist
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4.3 Lead Compounds from the Natural World4.3 Lead Compounds from the Natural World ENDOGENOUS COMPOUNDSENDOGENOUS COMPOUNDS
NATURAL SUBSTRATES FOR ENZYMESNATURAL SUBSTRATES FOR ENZYMES
EnkephalinsEnkephalins Enkephalinase inhibitorsEnkephalinase inhibitors
PeptidesPeptides Protease inhibitorsProtease inhibitors
H2NN
HO
CO2HH
L-Phe-L-Pro
HN
NH
N
N
OCONH2
HO
H
H
OHH
H
H NH
O
SAQUINAVIR