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CHAPTER-5 PART-I Development and Application of New Methodologies for Synthesis of Bioactive Molecules 256 PART-I Introduction to Glycerol. 5.1.1 INTRODUCTION: 5.1.2 OBJECTIVE OF THE WORK: 5.1.3 DESIGN AND DEVELOPMENT: 5.1.3.1 Solvent properties of glycerol 5.1.3.2 Limitations 5.1.4 TWELVE PRINCIPAL OF GREEN CHEMISTRY 5.1.5 REFERENCES:

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Page 1: PART-I Introduction to Glycerol. - INFLIBNETshodhganga.inflibnet.ac.in/bitstream/10603/9231/10/10_chapter 5.pdf · PART-I Introduction to Glycerol. 5.1.1 INTRODUCTION: 5.1.2 OBJECTIVE

CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 256

PART-I Introduction to Glycerol.

5.1.1 INTRODUCTION:

5.1.2 OBJECTIVE OF THE WORK:

5.1.3 DESIGN AND DEVELOPMENT:

5.1.3.1 Solvent properties of glycerol

5.1.3.2 Limitations

5.1.4 TWELVE PRINCIPAL OF GREEN CHEMISTRY

5.1.5 REFERENCES:

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 257

“It is better to prevent waste than to

treat or clean up waste after it is

formed”

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 258

5.1.1 INTRODUCTION TO GLYCEROL:

Most of the organic reactions occur in a liquid phase. The solvent not only allows a

better contact between reactants, stabilizes or destabilizes intermediates and/or

transition states but also determines the choice of work up procedures and recycling or

disposal strategies. Taking into account the impact of chemical processes on the

environment, the search for innovative concepts for the substitution of volatile organic

solvents has become a tremendous challenge in academia and industry.1 According to

the twelve principles of green chemistry (Table 1), a green solvent should meet

numerous criteria such as low toxicity, non-flammability, non-mutagenicity, non-

volatility and widespread availability among others. Moreover these green solvents

have to be cheap and easy to handle and recycle.2

In the past decade, water,3 ionic liquids,

4 polyethylene glycol,

5 supercritical fluids

6

(particularly supercritical carbon dioxide (scCO2)7) and perfluorinated solvents

8

appeared as the most promising approaches for current solvent innovation. Although

fascinating results have been reported, use of these solvents is still subject to strict

limitations such as high cost equipment for scCO2,9 or high prices and lack of data

about the toxicity and bio-compatibility for ionic liquids,10

or product separation for

aqueous-based processes.11

In other words, a universal green solvent doesn’t exist and

for this reason, the scientific community is continuously searching for new sustainable

media in order to widen their use in catalytic and organic processes.

Nowadays, most solvents are prepared from fossil oil reserves. With the predicted

disappearance of oils, interest in utilization of biomass-derived solvents has grown.12

So far, many naturally available products, such as soy methyl ester,13

lactate ester,14

D-

limonene15

and polyhydroxyalkanoates16

among others have been proposed as safer

solvents for catalysis, organic reactions or separations. Many others have also been

used as precursors for the synthesis of potentially safer green solvents, for example,

bio-based ionic liquids.17

As compared to the traditional petrochemical-derived

solvents, these biomass-based solvents exhibit many advantages such as

biodegradability, low vapor pressure and high boiling point which perfectly fit with

the different international legislations pushing forward the reduction of volatile

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 259

organic compounds (VOCs) in the atmosphere. If these biomass-derived solvents are

attractive from the viewpoint of green chemistry, it is also noteworthy that their broad

utilization in industry requires them to be cost profitable which represents a

prerequisite for their viable utilization.

In this context, the possible use of glycerol as a solvent for catalysis or organic

chemistry has become of particular interest. This topic is mainly boosted by the rapid

emergence of biodiesel on the market. Indeed, glycerol is the main co-product of the

vegetable oil industry and new applications are now strongly researched for this

natural polyol.18

Most efforts in this area focus on conversions of glycerol to higher

value-added chemicals and some comprehensive reviews have already summarized

this work.19

Although promising works have been reported, other methods that are

capable of economically utilizing glycerol waste have also to be considered. In

particular, the utilization of glycerol as a solvent or as a precursor for the synthesis of

biomass-based solvents has recently emerged in the literature as a feasible and

promising approach. Even if this topic does not aim to consume glycerol as a reactant,

it is noteworthy that the direct use of glycerol as a solvent offers an indisputable

economically and environmentally viable application for this natural polyol.

In this perspective, we develop a method for the synthesis of N-heterocycle, using

glycerol as solvent in a catalyst free condition.

Water is the first solvent of choice regarding the aforementioned considerations, yet

the negligible solubility of many organic and organo-metallic compounds in water

limits its applications. Using organic, petroleum-based, solvents that allow dissolving

a large variety of solid, liquids, and gases is usually accompanied with air, water, and

land contamination. Fluorous phases20

and ionic liquids21

have been reported as

recyclable environmentally benign reaction media. However, not only that ionic

liquids and perfluorinated solvents are non-biodegradable and toxic, their production

is also associated with use of high amounts of hazardous and volatile organic solvents.

Supercritical fluids and especially supercritical CO2 have also been reported as green

solvents, but their high critical properties still limits their practical use.22

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Development and Application of New Methodologies for Synthesis of Bioactive Molecules 260

Glycerol is usually produced as a byproduct of the trans etherification of a triglyceride

in the production of natural fatty acid derivatives. These derivatives are utilized in

many areas from pharmaceuticals and food industry to alternative fuels, e.g.,

biodiesel, and thus as the production of glycerol raises its price decreases. In addition,

glycerol has also promising physical and chemical properties. It has a very high

boiling point and negligible vapor pressure; it is compatible with most organic and

inorganic compounds, and does not require special handling or storage. Glycerol, as

other polar organic solvents such as DMSO and DMF, allows the dissolution of

inorganic salts, acids, and bases, as well as enzymes and transition metal complexes

(TMCs), but it also dissolves organic compounds that are poorly miscible in water and

is non-hazardous. Different hydrophobic solvents such as ethers and hydrocarbons

which are immiscible in glycerol allow removing the products by simple extraction.

Distillation of products is also feasible due to the high boiling point of glycerol.

5.1.2 OBJECTIVE OF WORK:

The purpose of this study is to explore the scope and limitations of glycerol as

alternative green reaction medium. Glycerol, which is a non-toxic, biodegradable, and

recyclable liquid manufactured from renewable sources, shows similar properties as

an ionic liquid and has a high potential to serve as green solvent for organic syntheses.

This has led us to study its possible use as such in a variety of ways. Several non-

catalytic and catalytic reactions using homogeneous and heterogeneous chemo- and

bio-catalysts have been thus studied in glycerol. The unique physico-chemical nature

of glycerol enables easy separation of the product by extraction or distillation together

with catalyst recycling. These properties can also be translated into other processes

which require non-aqueous polar solvents such as non-aqueous emulsions,23

as well as

applications in microwave promoted synthesis.24

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 261

5.1.3 DESIGN AND DEVELOPMENT:

Solvents are used daily in numerous industrial processes as reaction medium, in

separation procedures, and as diluters. As reaction medium, solvent are employed to

bring reactants and/or catalysts together and to deliver heat and momentum.25

In

addition, the solvent may also affect activity and selectivity. The choice of the right

solvent; i.e., its chemical, physical, and biological nature, also plays a key role from

environmental, economic, safety, handling, and products isolation point of views.

Considering properties of glycerol as a green solvent we choose it for the synthesis of

nitrogen heterocycles. The points are discussed.

5.1.3.1 SOLVENT PROPERTIES OF GLYCEROL:

In its pure form, glycerol is a sweet-tasting, clear, colorless, odorless and viscous

liquid. Because it is a trihydric alcohol, glycerol is a polar protic solvent with a

dielectric constant of 42.5 (at 25OC) which is intermediate between that of water

(78.5) and an ionic liquid such as 1-buyl-3-methylimidazolium hexafluorophosphate

([BMIm]PF6,11.4). Glycerol is completely soluble in water and short chain alcohols,

sparingly soluble in many common organic solvents (ethyl acetate, dichloromethane,

diethyl ether, etc…), and is insoluble in hydrocarbons. At low temperatures (<17.8,

glycerol forms crystals. Its specific density is 1.26 and its molecular weight is 92.09.

Prior to using glycerol as a potentially safer solvent, some specific points have to be

taken into consideration in order to maximize as much as possible its solvent

properties:

(1) Solubility:

Like polar solvents such as water, DMSO and DMF, glycerol is able to facilitate

dissolution of inorganic salts, acids, bases, enzymes and many transition metal

complexes. Furthermore, it also dissolves organic compounds that are poorly miscible

in water. Many hydrophobic solvents, such as ethers and hydrocarbons, are

immiscible in glycerol. This enables the reaction products to be removed by simple

liquid–liquid phase extraction.

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 262

(2) Volatility and boiling point:

As mentioned above, glycerol is nonvolatile under normal atmospheric pressure and

has a high boiling point (290OC), thus making distillation of the reaction products a

feasible separation technique. Moreover, taking advantage of its high boiling point,

reactions in glycerol can be carried out at high temperatures, thus allowing

acceleration of the reaction, or making possible reactions that do not proceed in low

boiling point solvents.

(3) Safety:

Data about the toxicity and environmental compatibility have to be collected before

utilization of a green solvent on a large scale. In this context, glycerol has a clear

advantage compared with most organic solvents. Indeed, glycerol is a nontoxic (LD50

(oral rat)=12600 mg/Kg), biodegradable and nonflammable solvent for which no

special handling precautions or storage is required. In particular, the low toxicity of

glycerol also allows its use as a solvent in the synthesis of pharmaceutically active

ingredients, in which the toxicity and residue of solvents have to be carefully

controlled.

(4) Availability:

To be viable, a green solvent has to be cheap and available on a large scale. Glycerol

meets these criteria since it is available on a large scale from the vegetable oil

industry. For instance, the production of glycerol reached 1.5 Mt in 2009. Glycerol is

also very cheap (0.50 €/Kg for pharmaceutical grade (99.9%) and 0.15€/Kg for the

technical grade (80%)) and, sometimes, even cheaper than water.

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 263

5.1.3.2 LIMITATIONS:

Despite these clear advantages, the possible use of glycerol as a solvent also requires

chemists to overcome a few obstacles such as:

(1) The high viscosity of glycerol that can induce important mass transfer

problems. Fortunately, at temperatures higher than 60OC, glycerol is much less

viscous. Therefore, reactions involving glycerol as solvent have to proceed at

temperatures higher than 60OC. Otherwise, a fluidifying co-solvent has to be

used.

(2) The chemical reactivity of hydroxyl groups which can lead to the formation of

side products. In particular, the three hydroxyl groups of glycerol are reactive

in extremely acidic or basic conditions. Therefore, glycerol has to be used as a

solvent in a chemically inert environment for the hydroxyl groups to remain

intact.

(3) The coordinating properties of glycerol which may induce some problems

when transition metal complex catalysts are used in this solvent. In particular,

deactivation of organometallic complexes might occur in glycerol.

Taking into account these advantages and disadvantages, research dealing with the

possible use of glycerol as a solvent is no longer a simple transfer of a known method

from a conventional solvent system to glycerol. Therefore, innovative solutions have

to be thought of in order to maximize the advantages of glycerol. Although it seems

very difficult, after a few years of exploration, researchers involved in this field have

developed some successful examples that not only have demonstrated the feasibility

and the necessity of using glycerol as a solvent, but have also contributed to the

emergence of promising methods especially in the field of organic synthesis, catalysis,

separations and materials chemistry. Now, we will show what glycerol as a solvent

contributes to current chemistry.

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 264

5.1.4 TWELVE PRINCIPAL OF GREEN CHEMISTRY:

1. Prevention It is better to prevent waste than to treat or

clean up waste after it has been created.

2. Atom Economy Synthetic methods should be designed to

maximise the incorporation of all

materials used in the process into the final

product.

3. Less Hazardous Chemical

Synthesis

Wherever practicable, synthetic methods

should be designed to use and generate

substances that possess little or no toxicity

to people or the environment.

4. Designing Safer Chemicals

Chemical products should be designed to

effect their desired function while

minimising unnecessary whenever possible

and innocuous when used.

5. Safer Solvents and Auxiliaries

The use of auxiliaries substances (e.g.,

solvents or separation agents) should be

made unnecessary whenever possible and

innocuous when used.

6. Design for Energy Efficiency

Energy requirements of chemical

processes should be recognised for their

environmental and economic impacts and

should be minimised. If possible, synthetic

methods should be conducted at ambient

temperature and pressure.

7. Use of Renewable Feedstocks

A raw material or feedstock should be

renewable rather than depleting whenever

technically and economically practicable.

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Development and Application of New Methodologies for Synthesis of Bioactive Molecules 265

8. Reduce Derivatives

Unnecessary derivatization (use of

blocking groups, protection/de-protection,

and temporary modification of

physical/chemical processes) should be

minimised or avoided if possible, because

such steps require additional reagents and

can generate waste.

9. Catalysis

Catalytic reagents (as selective as

possible) are superior to stoichiometric

reagents.

10. Design for Degradation Chemical products should be designed so

that at the end of their function they break

down into innocuous degradation products

and do not persist in the environment.

11. Real-time Analysis for

Pollution Prevention

Analytical methodologies need to be

further developed to allow for real-time,

in-process monitoring and control prior to

the formation of hazardous substances.

12. Inherently Safer Chemistry for

Accident Prevention

Substances and the form of a substance

used in a chemical process should be

chosen to minimise the potential for

chemical accidents, including releases,

explosions, and fires.

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 266

5.1.5 REFERENCES:

1. Kerton, F. M.; Alternative Solvents for Green Chemistry, RSC Green Chemistry

Series, Series Editors: J. Clark, 2009

2. Capello, C.; Fisher, U.; Kungerbuhler, K.; Green Chem., 2007, 9, 927

3. Li, C. J.; Chen, L.; Chem. Soc. Rev., 2006, 35, 68

4. Plechkova, N. V.; Seddon, K. R.; Chem. Soc. Rev., 2008, 37, 123

5. Chen, J.; Spear, S. K.; Huddleston J. G.; Rogers, R. D.; Green Chem., 2005, 7,

64

6. Brennecke, J. F.; Chem. Ind., 1996, 831

7. Eckert, C. A.; Knutson, B. L.; Debenedetti, P. G.; Nature, 1996, 383, 313

8. Horvath, I. T.; Acc. Chem. Res., 1998, 31, 641

9. DeSimone, J. M.; Hill, C.; Tumas, W. (Ed.), Green ChemistryUsing Liquid and

Supercritical Carbon Dioxide, 2003, Oxford University Press, USA

10. a) Rogers, R. D.; Seddon, K. R.; (Ed.) Ionic Liquids as Green Solvents

progress and prospect, ACS Pub., 2003 b) Coleman, D.; Gathergood, N.;

Chem. Soc. Rev., 2010, 39, 600

11. William, M. N.; (Ed.) Green Solvents for Chemistry-Perspectives and

Practice, 2003, Oxford University Press, USA

12. Rinaldi, R.; Schuth, F.; Chem Sus Chem, 2009, 2, 1096

13. Salehpour, S.; Dube, M. A.; Green Chem., 2008, 10, 321

14. Aparicio, S.; Alcalde, R.; Green Chem., 2009, 11, 65

15. Virot, M.; Tomao, V.; Ginies, C.; Visinoni, F.; Chemat, F.; J. Chromatogr., A,

2008, 147, 1196

16. Reddy, C. S. K.; Ghai, R.; Rashmi; and Kalia, V. C.; Bioresour. Technol.,

2003, 87, 137

17. Imperato, G.; Koenig, B.; Chiappe, C.; Eur. J. Org. Chem., 2007, 1049

18. Pagliaro, M.; Ciriminna, R.; Kimura, H.; Rossi, M.; Pina, C. D.; Angew.

Chem., Int. Ed., 2007, 46, 4434

19. a) Jerome, F.; Pouilloux, Y.; Barrault, J.; Chem Sus Chem, 2008, 1, 586 b)

Zhou, C. H.; Beltramini, J. N.; Fan, Y. X.; Lu, G. Q.; Chem. Soc. Rev., 2008,

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CHAPTER-5 PART-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 267

37, 527 c) Pagliaro, M.; Ciriminna, R.; Kimura, H.; Rossi, M.; Della Pina, C.;

Angew.Chem., Int. Ed., 2007, 46, 4434 d) Behr, A.; Eilting, J.; Irawadi, K.;

Leschinski, J.; Lindner, F.; Green Chem., 2008, 10, 13 e) Pagliaro, M.; Rossi,

M.; The Future of Glycerol: New Usages for a Versatile Raw Material, 2008,

RSC Publishing, Cambridge, UK.

20. Horvath, IT.; Rabai, J.; Science, 1994, 266,72

21. Wasserscheid P, Welton T.; Ionic liquids in synthesis, Wiley,Weinheim, 2003.

22. Jessop, P. G.; Leitner, W.; Chemical synthesis using supercritical fluids, Wiley,

Weinheim 1999

23. Imhof, A.; Pine, D. J.; J Colloid Interface Sci, 1997, 192, 368

24. Kappe, C. O.; Angew Chem Int Ed, 2004, 43,6250

25. Reichardt, C.; Solvent effects in organic chemistry.Verlag Chemie, Weinheim,

1979

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CHAPTER-5 PART-II SECTION-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 268

SECTION–I Synthesis of Quinoxaline

SECTION-II Synthesis of Benzoxazole and Benzimidazole

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CHAPTER-5 PART-II SECTION-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 269

SECTION-I Synthesis of Quinoxaline

5.2.1 INTRODUCTION:

5.2.2 LITERATURE SURVEY:

5.2.2.1 General method for quinoxaline synthesis

5.2.3 OBJECTIVE OF THE WORK:

5.2.4 DESIGN AND DEVELOPMENT:

5.2.5 EXPERIMENTAL:

5.2.6 RESULT AND DISCUSSION:

5.2.6.1 Mechanism of the reaction

5.2.7 SUMMERY AND CONCLUSION:

5.2.8 REFERENCES:

5.2.9 SPECTRA:

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Development and Application of New Methodologies for Synthesis of Bioactive Molecules 270

5.2.1 INTRODUCTION:

The chemistry of heterocyclic compounds has been an interesting field of study for a

long time. Quinoxalines are well known and important N-containing heterocyclic

compound, containing a ring complex made up of a benzene ring and a pyrazine ring,

so called benzopyrazine. It is isomeric with quinazoline, phthalazine and cinnoline.1

Figure 1

Quinoxaline derivatives display a broad spectrum of biological properties (Figure 2)

ranging from DNA cleaving drugs,2 antimicrobial and cancer drugs,

3 to antibiotic

4 and

antitumor activity.5 Which have made them privileged structures in combinatorial drug

discovery libraries.6 They have also found applications as dyes

7 and building blocks in

the synthesis of organic semiconductors,8 and they also serve as useful rigid subunits

in macro cyclic receptors or molecular recognition9 and chemically controllable

switches.10

Therefore, there are constantly new and innovative ideas being developed

to access this important moiety.

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CHAPTER-5 PART-II SECTION-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 271

Figure 2

Recently use of glycerol as a sustainable solvent for green chemistry has attracted

more attention. These include Pd-catalyzed Heck and Suzuki cross-couplings, base-

and acid- promoted condensations, catalytic hydrogenation, and asymmetrical

hydrogenation. The peculiar physical and chemical properties of glycerol, such as

polarity, low toxicity, biodegradability, high boiling point, and ready availability from

renewable feedstocks,11

prompted us to extend its use as a green solvent in organic

synthesis.

5.2.2 LITERATURE SURVEY:

5.2.2.1 General method for quinoxaline synthesis

A number of synthetic strategies have been developed for the preparation of

substituted quinoxalines. By far, the most common method relies on the condensation

of an aryl 1,2-diamine with a 1,2-dicarbonyl compound in refluxing ethanol or acetic

acid for 2-12 h giving 34-85 % yields.12

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CHAPTER-5 PART-II SECTION-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 272

Scheme 5.1-General procedure for the synthesis of quinoxalines

Furthermore, there are several synthetic routes toward quinoxalines, including Bi-

catalyzed oxidative coupling of epoxides with ene-1,2-diamines, heteroannulation of

nitroketene N, S-aryliminoacetals with POCl3, cyclization of α-arylimino oximes of α-

dicarbonyl compounds, and from α-hydroxy ketones via a tandem oxidation process

using Pd(OAc)2 or RuCl2-(PPh3)3-TEMPO as well as MnO2.13

Most of the existing

methodologies suffer from disadvantages such as use of volatile organic solvents,

unsatisfactory product yields, critical product isolation procedures, expensive and

detrimental metal precursors and harsh reaction conditions, which limit their use under

the aspect of environmentally benign processes.

1) Coupling of epoxides and ene-1,2 diamines.

The oxidative coupling of epoxides 108 and ene-1,2 diamines 102 in the presence of

Bi(0) and acid derivatives14

is an alternate procedure to access quinoxalines 109

(Scheme 5.2). The reaction is fascinating since epoxides are generally not used to

access quinoxalines although one method using cyano and sulfonyl epoxides has been

reported.15

Scheme 5.2

2) Ammonium heptamolybdate tetrahydrate mediated synthesis of

quinoxaline.

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CHAPTER-5 PART-II SECTION-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 273

A. Hasaninejad et al have been reported the synthesis of quinoxalines from aryl 1,2-

diamines and 1,2-diketones in the presence of ammonium heptamolybdate

tetrahydrate in EtOH/H2O (3/1) at room temperature (Scheme 5.3).16

Scheme 5.3

3) Polyethylene glycol (PEG‐400) mediated synthesis of quinoxalines.

Lingaiah Nagarapu et al have been reported a Polyethylene glycol (PEG‐400)

mediated synthesis of quinoxalines (Scheme 5.4).17

Scheme 5.4

4) Gallium(III) triflate-catalyzed synthesis of quinoxaline.

Jing-Jing Cai et al have been reported a Gallium(III) triflate-catalyzed synthesis of

quinoxaline derivatives (Scheme 5.5).18

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CHAPTER-5 PART-II SECTION-I

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 274

Scheme 5.5

5) Molecular iodine as the catalyst for a one-pot synthesis of quinoxaline.

Rajesh S. Bhosale et al also reported use of molecular iodine as the catalyst for a one-

pot synthesis of quinoxaline derivatives at room temperature (Scheme 5.6).19

Scheme 5.6

6) Synthesis of quinoxaline under microwave irradiation.

K. Padmavathy et al synthesis of quinoxalines, performed in two stages or as a one-

pot reaction, starting from ketones via their α-hydroxylimino ketone derivatives, and

condensation of the latter with 1,2- diaminobenzene (Scheme 5.7).20

Scheme 5.7

7) Synthesis of quinoxoline using β-cyclodextrin.

B. Madhav, S et al have been synthesized the various quinoxalines for the first time in

the presence of β-cyclodextrin in water (Scheme 5.8).21

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Scheme 5.8

8) Silica supported synthesis of quinoxaline.

Khodabakhsh Niknam et al reported the synthesis of The reaction of 3-

mercaptopropylsilica (MPS) and chlorosulfonic acid in chloroform afforded silica

bonded S-sulfonic acid (SBSSA), which was used as a catalyst for the room

temperature synthesis of quinoxaline derivatives from 1,2-diamino compounds and

1,2-dicarbonyl compounds (Scheme 5.9).

Scheme 5.9

9) Proline catalysed synthesis of quinoxaline.

Majid M. Heravi et al also have been reported the synthesis of quinoxaline

Zn[(L)proline] was found to be an effective catalyst for the very fast synthesis of

quinoxaline derivatives from the condensation of the o-phenylenediamines and 1,2-

dicarbonyl compounds at room temperature (Scheme 5.10).22

Scheme 5.10

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Limitations of Literature methods.

Use of acid.

Use of metals

Create environmental issue

Generate toxic waste

5.2.3 OBJECTIVE OF WORK:

The purpose of this study is to explore the scope and limitations of glycerol as

alternative green reaction medium. In this sense and due to our interest on green

protocols correlated to the heterocyclic chemistry, we describe herein the use of

glycerol as a green solvent for the preparation of quinoxaline via condensation

reaction.

The previous survey illustrates biological significant of a variety of substituted

quinoxaline which proved to possess wide range of biological activities

On the light of these findings, the present work focuses on the synthesis of certain

quinoxaline derivatives. Hence, a further investigation was adopted to predict the

effect of changing the solvent.

5.2.4 DESIGN AND DEVELOPMENT:

Though there are many methods reported for synthesis of quinoxaline but most of the

methods are having limitations as mentioned in above from environmental point of

view. Therefore still there is broad scope for development of new green method for

the quinoxaline synthesis, so to overcome above mentioned drawbacks. Efforts has

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been done to develop a new green method for direct synthesis of quinoxaline which

can overcome some of the limitations of existing methods in terms of safety, reaction

time, yield, and cost of reagents.

Now, a day glycerol has played a prominent role in the ecological system as green

solvent. We have tried to extend these green properties of glycerol solvent for the

condensation of 1,2 diamine with 1,2 dicarbonyl compounds, and expected that it

could be cyclised by glycerol and can able to give quinoxaline, without applying any

use of acid or any catalyst.

Based on this aspect the model reaction was carried out by using o-phenylenediamine,

and benzil in a glycerol, and reaction was monitored by TLC.

Reaction went to completion after 4 h. After completion of reaction, and work up,

products containing a mixture of compounds were isolated. These compounds were

separated by column chromatography & characterization were carried out by using IR

and NMR techniques and their structure were elucidated as 2,3 diphenylquinoxaline.

The isolated yield was 74% as shown in (Scheme 5.11).

So for our preliminary study, we had successfully developed a simple ecofreindly

method for synthesis of quinoxoline, using very cheap and readily available solvent,

i.e. glycerol. In proposed intensified process all the reaction conditions are feasible

and mild from industrial point of view. All the reagents commercially available and

conditions are easy to handle.

Scheme 5.11

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5.2.5 EXPERIMENTAL:

General procedure for synthesis of quinoxaline derivative:

Table 2, entry 1: 2,3-Diphenylquinoxaline

To a stirred solution of o-phenylenediamine (0.9 mmol, 0.1 gm) in H2O (2 mL),

glycerol (5 ml) was added, and the reaction mixture was heated to 90OC followed by

addition of benzil (0.9 mmol, 0.1 gm). The reaction mixture was stirred vigorously at

90OC. The progress of reaction was monitored by TLC. When all the starting material

had been consumed, the reaction was quenched with water (10 mL) and extracted with

ethyl acetate (2 X 10 mL). The organic phase was separated and dried over anhydrous

Na2SO4 and evaporated under reduced pressure to give crude product. The pure

product was isolated by silica gel column chromatography using (EtOAc: hexane,

1:9); 0.19g (75%).

M. P. 127–128OC (Lit

13a m.p: 127

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.2 (m,

2H), 7.79 (m, 2H), 7.5 (m, 4H), 7.39 (m, 6H); IR (KBr) (cm-1

): 3055, 1541, 1345, 768,

729

Table 2, Entry 2: 6-chloro-2,3-diphenylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.164g, (74%) as White solid; m.p.

124126OC;

1H NMR (60 MHz, CDCl3): δ 8.19-8.15 (m, 1H, ArH), 8.14-8.07 (m, 1H,

ArH), 7.74-7.67 (m, 1H, ArH), 7.55-7.40 (m, 4H, ArH), 7.42-7.30 (m, 6H, ArH); IR

(KBr) νmax/cm-1

: 3060, 1544, 1350, 770

Table 2, Entry 3: 6-nitro-2,3-diphenylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.177g, (83%) as yellow powder, m.p.

194-195OC;

1H NMR (CDCl3, 60 MHz): δ 9.08 (d, 1H), 8.53 (m, 1H), 8.30 (d, 1H),

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7.55-7.58 (m, 4H), 7.35-7.44 (m, 6H); IR (KBr) νmax/cm-1

: 3439, 1614, 1520, 1397,

1340, 699.

Table 2, Entry 4: 6-methyl-2,3-diphenylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.152g, (63%) as white solid, m.p. 135-

137OC ,

1H NMR (CDCl3, 60 MHz): δ 8.07 (d, 1H), 7.96 (s,1H), 7.50-7.53 (m, 5H),

7.32-7.35 (m, 6H), 2.62 (s, 3H); IR (KBr) νmax/cm-1

: 3053, 1615, 1488, 1447, 1341,

670.

Table 2, Entry 5: 2,3-bis(4-methoxyphenyl)quinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.221g, (70%) as white solid, m.p. 148-

150OC;

1H NMR (CDCl3, 60 MHz): δ 8.13 (m, 2H), 7.73 (m, 2H), 7.50 (d, 4H), 6.88

(d, 4H), 3.84 (s, 6H); IR (KBr) νmax/cm-1

: 2930, 2836, 1605, 1511, 1344, 1293, 1246,

1173, 833.

Table 2, Entry 6: 2,3-bis(4-methoxyphenyl)- 6-chloroquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.190g, (72%) as Pale yellow solid,

m.p.150-151OC;

1H NMR (CDCl3): δ 3.90 (s, 6H), 6.79 (m, 4H), 7.48-7.57 (m, 4H),

7.72 (m, 1H), 8.10-8.16 (m, 2H); IR (KBr): Vmax cm-1

3442, 3354, 3240, 2913, 1634,

1589, 1562,

Table 2, Entry 7: 2,3-bis(4-methoxyphenyl)-6-nitroquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.189g, (75%) as yellow powder, m.p.

192-193OC;

1HNMR (CDC13, 60 MHz) δ(ppm): 9.1 (d, 1H), 8.49 (m, 1H), 8.24 (d,

1H), 7.56 (m, 4H), 6.98 (d, 4H), 3.9 (s, 6H); IR (KBr) νmax (cm-1

): 2924, 1337, 1169,

1021, 835

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Table 2, Entry 8: 2,3-bis(4-methoxyphenyl)-6-methylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.215g, (74%) as White solid, m.p. 126-

127OC;

1H NMR (CDCl3, 60 MHz): δ 8.00 (d, 1H), 7.90 (s, 1H), 7.46 - 7.56 (m, 5H),

6.87 (d, 4H), 3.83 (s, 6H), 2.59 (s, 3H); IR (KBr) νmax/cm-1

: 2925, 2835, 1606, 1343,

1292, 1248, 1175, 833

Table 2, Entry 9: 2,3-di-2-furylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.169g, (70%) as Pale brown solid,

m.p.133-134OC;

1H NMR (CDCl3, 60 MHz): δ 8.12 (m, 2H), 7.72 (m, 2H), 7.61 (s,

2H), 6.66 (d, 2H), 6.55 (s, 2H); IR (KBr) νmax/cm-1

: 3103, 1566, 1484, 1397, 1328,

755

Table 2, Entry 10: 6-chloro-2,3-di-2-furylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.149g, (72%) as Brown solid, m.p.125-

126OC;

1H NMR (60 MHz, CDCl3): δ 8.14-8.00 (m, 2H, ArH), 7.70-7.64 (m, 1H,

ArH), 7.64-7.56 (s, 2H, furan-H), 6.72-6.50 (m, 4H, furan-H);IR (KBr): Vmax cm-1

3108, 1568, 1488, 1399, 1332, 755.

Table 2, Entry 11: 2,3-di-2-furyl-6-nitroquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.150g, (75%) as Orange solid, m.p. 165-

166OC;

1H NMR (CDCl3, 60 MHz): δ 8.98 (d, 1H), 8.47 (m, 1H), 8.20 (d, 1H), 7.65-

7.68 (m, 2H), 6.85 (m, 2H), 6.60-6.63 (m, 2H); IR (KBr) νmax/cm-1

: 3388, 1574,

1522, 1477, 1337, 749

Table 2, Entry 12: 2,3-di-2-furyl-6-methylquinoxaline

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

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general procedure to gave the product with 0.146g, (65%) as Brown solid, m.p.116-

117OC;

1H NMR (CDCl3, 60 MHz): δ 8.01 (d, 1H), 7.91 (s, 1H), 7.56-7.61 (m, 3H),

6.55 ca. 6.62 (m, 4H), 2.58 (s, 3H); IR (KBr) νmax/cm-1

: 3106, 2918, 1485, 1323,

747

Table 2, Entry 13: dibenzo(a,c)phenazine

To a stirred solution of opd (0.1g, 1 equiv., 0.93 mmol.), in glycerol:H2O (5:2 mL)

was added a benzil (0.1g, 1 equiv., 0.9 mmol,) and the remaining procedure same as

general procedure to gave the product with 0.194g, (75%) as white powder, m.p.124-

126OC;

1H NMR (60 MHz, CDCl3) ppm δ 7.51-7.66 (m, 6H), 8.10-8.13 (m, 2H), 8.33

(d, 2H), 9.18 (d, 2H); IR (KBr): Vmax cm-1

3351, 3228, 2900, 1630, 1578, 1559, 1410

5.2.6 RESULT AND DISCUSSION:

Scheme 5.12

In a model condensation reaction, benzil and 1,2- diaminobenzene in glycerol were

heated at 50OC, (Table 1, entry 2). The progress of the reaction was monitored by

TLC. After completion of the reaction after 8 h, an aqueous work-up afforded 2,3-

diphenylquinoxaline 2a (50% yield).

To optimise the reaction conditions to afford the desired quinoxoline in good yield,

the same reaction was conducted at different temperature and it was observed that as

slightly increasing temperature, the rate of reaction increases and good amount of

yield was obtained at 90OC within 4 h (Table 1, entry 6). The reaction was

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unsuccessful when carried out at room temperature, even after 24 h (Table 1, entry

1).

To evaluate the use of this procedure, a variety of substituted o-phenylenediamines

were condensed with 1,2-disubstituted 1,2-dicarbonyl compounds. The results are

shown in Table 2. It was observed that the starting materials were consumed after

long reaction time as indicated by TLC analysis. Again the advantage of this protocol

is, after the work-up procedure, glycerol is successfully recovered and reused for

another reaction without affecting the yields.

Next, we also carried out the same reaction in glycerol–methanol mixture and

recovered the desired product in the yield comparable to that obtained in glycerol–

water system. Thus the glycerol–methanol is also a suitable solvent for this

transformation. A variety of aldehydes were condensed with different 1,2 dicarbonyl

compound and the results are summarised in Table 2.

Scheme 5.13

Table 1. Reaction of OPD (1 eqiv.) & benzil (1 eqv.) in glycerol at different rxn. conditions

Entry Solvent Rxn.

condition

Time

(h)

Yield

(%)

1 Glycerol R T 24 NR

2 Glycerol 50Oc 8 50

3 Glycerol:H2O R T 24 NR

4 Glycerol:H2O 50Oc 8 60

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5 Glycerol:H2O 70Oc 6 68

6 Glycerol:H2O 90Oc 4 75

7 Glycerol:Methanol 90Oc 5 65

Table 2 Reaction of 1,2 diarylamines with 1,2 diketones in presence of glycerola

Entry 1,2

Diaminobenzene 1,2 Diketone Product

Time

(h)

Yieldb

%

1

4

75

2

5

74

3

4

83

4

4

63

5

4

70

6

6

72

7

4

75

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8

6

74

9

5

70

10

5

72

11

4 75

12

5

65

13

4

75

aReaction conditions: 1,2diamine (1 equiv), 1,2diketone (1equiv). bIsolated yields after column chromatography and structures were confirmed by comparison of m.p. with authentic materials.

5.2.6.1 Mechanism of the reaction

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Figure 3

5.2.7 SUMMARY AND CONCLUSION:

The chemistry of heterocyclic compounds has been an interesting field of study for a

long time. Quinoxalines are well known and important N-containing heterocyclic

compound, containing a ring complex made up of a benzene ring and a pyrazine ring,

so called benzopyrazine. A number of synthetic strategies have been developed for the

preparation of substituted quinoxalines. Quinoxaline derivatives display a broad

spectrum of biological properties ranging from DNA cleaving drugs, antimicrobial and

cancer drugs, to antibiotic

and antitumor activity. Which have made them privileged

structures in combinatorial drug discovery libraries.

In summary, we have described an efficient protocol for preparing quinoxaline

derivatives using glycerol as a solvent. The advantages of the present method lie in

using economic and environmentally benign glycerol as solvent, no use of catalyst,

mild reaction conditions, and good yields. This protocol suitable for large-scale

synthesis, providing a valuable synthetic tool for industrial applications.

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5.2.8 REFERENCES :

1. Brown, D. J.; Taylor, E. C. The Chemistry of Heterocyclic Compounds,

Quinoxalines: Supplement II; Wipf, P., Eds.; John Wiley& Sons: New Jersey,

2004.

2. Toshima, K.; Kimura, T.; Takano, R.; Ozawa, T.; Ariga, A.; Shima, Y.;

Umezawa, K.; Matsumura, S.; Tetrahedron 2003, 59, 7057

3. Sanna, P.; Carta, A.; Loriga, M.; Zanetti, S.; Sechi, L.; IL Farmaco 1998, 53,

455

4. Kim, Y. B.; Kim, Y. H.; Park, J. Y.; Kim, S. K.; Bioorg. Med. Chem. Lett.

2004, 14, 541

5. Hazeldine, S. T.; Polin, L.; Kushner, J.; White, K.; Corbett, T. H.; Horwitz, J.

P.; Bioorg. Med. Chem. 2005, 13, 3910

6. a) Wu, Z.; Ede, N. J.; Tetrahedron Lett. 2001, 42, 8115 b) Lee, J.; Murray, W.

V.; Rivero, R. A.; J. Org. Chem. 1997, 62, 3874 c) Holland, R. J.; Hardcastle,

I. R. Jarman, M.; Tetrahedron Lett. 2002, 43, 6435 d) Krchnak, V.; Smith, J.;

Vagner, J.; Tetrahedron Lett. 2000, 41, 2835 e) Uxey, T.; Tempest, P.; Hulme,

C.; Tetrahedron Lett. 2002, 43,1637 f) Zaragoza, F.; Stephensen, H.; J. Org.

Chem. 1999, 64, 2555

7. a) E.D. Brock, D.M. Lewis, T.I. Yousaf, H.H. Harper, The Proctor and Gamble

Company, WO 9951688, 1999 b) Sonawane, N. D.; Rangnekar, D. W.; J.

Heterocycl. Chem. 2002, 39, 303 c) Katoh, A.; Yoshida, T.; Ohkando, J.;

Heterocycles 2000, 52, 911

8. a) Dailey, S.; Feast, J. W.; Peace, R. J.; Sage, I. C.; Till, S.; Wood, E. L.; J.

Mater. Chem. 2001, 11, 2238 b) O’Brien, D.; Weaver, M. S.; Lidzey, D. G.;

Bradley, D. D. C.; Appl. Phys. Lett. 1996, 69, 881

9. a) Mizuno, T.; Wei, W. H.; Eller, L. R.; Sessler, J. L.; J. Am. Chem. Soc. 2002,

124, 1134 b) Elwahy, A. H. M.; Tetrahedron 2000, 56, 897

10. Crossley, J. C.; Johnston, L. A.; Chem. Commun. 2002, 1122

11. a) Gu, Y.; Jreome, F.; Green Chem. 2010, 12, 1127 b) Pagliaro, M.; Rossi, M.

In The Future of Glycerol: New Usages for a Versatile Raw Material; Clark, J.

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CHAPTER-5 PART-II SECTION-I

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H., Kraus, G. A., Eds.; RSC Green Chemistry Series: Cambridge, 2008 c)

Diaz-Alvarez, A. E.; Francos, J.; Lastra-Barreira, B.; Crochet, P.; Cadierno, V.

; Chem. Commun. 2011, 47, 6208

12. Bhosale R. S.; Sarda S. R.; Ardhapure S. S.; Jadhav W. N.; Bhusare S. R.;

Pawar R. P.; Tetrahedron Lett., 2005, 46, 7183

13. a] Antoniotti, S.; Donach, E.; Tetrahedron Lett., 2002, 43, 3971 b] Venkatesh,

C.; Singh, B.; Mahata, P. K.; IIa, H.; Junjappa, H.; Org. Lett. 2005, 7, 2169 c]

Xekoukoulotakis, N. P.; Hadjiantonious, M. C. P.; Maroulis, A. J.; Tetrahedron

Lett. 2000, 41, 10299 d] Robinson, R. S.; Taylor, R. J. K.; Synlett, 2005, 1003

e] Raw, S. A.; Wilfred, C. D.; Taylor, R. J. K.; Org. Biomol. Chem. 2004, 2,

788 f) Raw, S. A.; Wilfred, C. D.; Taylor, R. J. K.; Chem. Commun. 2003,

2286

14. Antoniotti, S.; Dunach, E.; Tetrahedron Lett. 2002, 43, 3971

15. Taylor, E. C.; Maryanoff, C. A.; Skotnicki, J. S.; J. Org. Chem. 1980, 45, 2512

16. Hasaninejada, A.; Zareb, A.; Mohammadizadeha, M. R.; Karamia, Z.; J. Iran.

Chem. Soc., 2009, 6, 153

17. Nagarapua, L.; Mallepallib, R.; Aravab, G.; Yeramanchib, L.; European

Journal Chemistry 2010, 1, 228

18. Cai, J. J.; Zou , J. P.; Pan, X. Q.; Wei, Z.; Tetrahedron Lett., 2008, 49, 7386

19. Bhosale, R. S.; Sarda, S. R.; Ardhapure, S. S.; Jadhav, W. N.; Bhusareb, S. R.;

Pawar, R. P.; Tetrahedron Lett., 2005, 46 , 7183

20. Padmavathy, K.; Nagendrappa, G.; Geetha, K. V.; Tetrahedron Lett., 2011, 52,

544

21. Madhav, B.; Murthy, S. N.; Reddy, V. P.; Rao, K. R.; Nageswar, Y. V. D.;

Tetrahedron Lett., 2009, 50, 6025

22. Heravi, M. M.; Tehrani, M. H.; Bakhtiari, K.; Oskooie, H. A.; Catalysis

Commu., 2007, 8, 1341

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5.2.9 SPECTRA:

Table 2, entry 1

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Table 2, entry 1

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Table 2, entry 4

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Table 2, entry 4

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Table 2, entry 3

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Table 2, entry 3

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Table 2, entry 13

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Table 2, entry 13

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SECTION-II Synthesis of Benzoxazole and Benzimidazole

5.2.1 INTRODUCTION:

5.2.2 LITERATURE SURVEY:

5.2.2.1Synthesis of Benzoxazole

5.2.2.2 Synthesis of Benzimidazole

5.2.3 DESIGN AND DEVELOPMENT:

5.2.4 EXPERIMENTAL:

5.2.5 RESULT AND DISCUSSION:

5.2.5.1 Mechanism of the reactions.

5.2.6 SUMMERY AND CONCLUSION:

5.2.7 REFERENCES:

5.2.8 SPECTRA:

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5.2.1 INTRODUCTION:

The main objective of the medicinal chemistry is to synthesize the compounds that

show promising activity as therapeutic agents with lower toxicity. Benzoxazole and

benzimidazole derivatives are very useful compound with well known biological

activity.

Benzoxazoles1and Benzimidazoles,

2 are privileged organic compounds due to their

recognition in biological and therapeutic activities (Figure 1). Recent medicinal

chemistry applications of these heterocyclic compounds include 5-lipoxygenase

inhibitor,3a

poly(ADP-ribose)polymerase (PARP) inhibitor,3b

factor Xa(FXa)

inhibitor,3c

histamine H1-receptor,3d-f

5-HT3-receptor agonist

2,3d HIV reverse

transcriptase inhibitor L-697,695,3g

anticancer agent NSC-693638,3h

and orexin-1

receptor antagonist SB-3348673i

.

Other applications of these compounds include their use as anti-inflammatory,4a

antimicrobial,4b

antibacterial,5 and antiviral

6a,b agents. So development of general

methods for the synthesis of these compounds is thus highly relevant for drug

discovery.

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Figure 1 Examples of some biologically active compounds

Solvents are used daily in numerous industrial processes as reaction medium, in

separation procedures, and as diluters. As solvents are responsible for a large part of

the waste and pollution generated by chemical processes, a key factor to enabling a

sustainable chemical process is solvent selection. Due to environmental concerns,

safety considerations, reduction of costs, and the simplicity of the process, reactions

using green solvents have drawn great attention in recent years.7

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5.2.2 LITERATURE SURVEY:

5.2.2.1Synthesis of Benzoxazole

To date, three commonly used strategies for the synthesis of 2-substituted

benzoxazoles have been developed. The first approach is through condensation of 2-

aminophenols with carboxylic acids in the presence of a strong acid at high

temperature.8 The drastic reaction conditions employed therein often cause low yields

and side reactions. The second method is via the oxidative cyclization of phenolic

Schiff bases promoted by various oxidants such as 2,3-dichloro-5,6-

dicyanobenzoquinone,9a

PhI(OAc)2,9b

ThClO4,9c

PCC,9d

I2,9e

K2S2O8,9f

Pd(OAc)2/O2,9g

HAuCl4•4H2O/O29h

and activated carbon/ O2.9i

The third approach to 2-substituted

benzoxazoles is the intramolecular cross-coupling of 2-bromoanilides promoted by

copper(I)/(II),10a

iron(III) complex,10b

or copper(II) oxide nanoparticles.10c

These

coupling reactions usually proceed under mild conditions with wide substrate scope.

1) Iron-Catalyzed Intramolecular O-Arylation

Iron-catalyzed intramolecular O-arylation, which represents a practical and

straightforward approach toward 2-aryl substituted benzoxazole derivatives (Scheme

5.1). 11

Scheme 5.1

2) Copper-Catalyzed Synthesis of Substituted Benzimidazoles, and Benzoxazoles

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The synthesis of substituted benzimidazoles, and benzoxazoles is described via

intramolecular cyclization of o-bromoaryl derivatives using copper (II) oxide

nanoparticles in DMSO under air (Scheme 5.2).12

Scheme 5.2

3) Synthesis of 2-arylbenzoxazoles by oxidation with o-iodoxybenzoic acid (IBX)

The preparation of 2-arylbenzoxazoles has been developed based on the oxidation of

phenolic Schiff bases with o-Iodoxybenzoic acid (IBX) (Scheme 5.3).13

Scheme 5.3

4) One-pot synthesis of 2-arylbenzoxazoles using hydrogen tetrachloroaurate as

catalyst under oxygen atmosphere

One-pot synthesis of 2-arylbenzoxazoles, which were directly synthesized from 2-

aminophenol and aldehydes catalyzed by hydrogen tetrachloroaurate (HAuCl4·4H2O)

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under an oxygen atmosphere with anhydrous tetrahydrofuran (THF) as solvent or in

solvent-free condition (Scheme 5.4).14

Scheme 5.4

5) A Synthesis of 2-Substituted Benzoxazoles via RuCl3·3H2O Catalyzed

Tandem Reactions in Ionic Liquid.

Synthesis of 2-substituted benzoxazoles through RuCl3•3H2O catalyzed, air oxidized

tandem reactions of 2-aminophenols and aldehydes in [bmim]BF4 was developed

(Scheme 5.5).15

Scheme 5.5

6) Phenylboronic acid catalyzed-cyanide promoted, one-pot synthesis of 2-(2-

hydroxyphenyl)benzoxazole derivatives

phenylboronic acid catalyzed, cyanide promoted synthesis of 2-(2-hydroxyphenyl)

benzoxazoles from salicylaldehydes and o-aminophenols is described (Scheme 5.6).16

Scheme 5.6

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5.2.2.2 Synthesis of Benzimidazole

Benzimidazoles have also been synthesized by a number of method and using a

variety of starting material. The reported methods involved the condensation of o-

phenylenediamine with different substituted aldehydes in the presence of various

transition metal–triflate salts such as Sc(OTf)3 or Yb(OTf)3,17a,b

sulphamic acid,17c

H2O2–HCl,17d

FeBr3,17e

KHSO417f

and HfCl417g

to afford benzimidazoles. However,

these methods suffer from many drawbacks such as long reaction time, usage of

expensive and corrosive reagent, high temperature with lesser yield products.

1) Copper- and Palladium-Catalyzed Intramolecular Aryl Guanidinylation.

The formation of 2-aminobenzimidazoles via intramolecular C-N bond formation

between an aryl halide and a guanidine moiety can be achieved using either copper or

palladium catalysis (Scheme 5.7).18

Scheme 5.7

2) Ionic liquid mediated synthesis.

A regioselective one-pot synthesis of 2-aryl benzimidazoles, benzoxazoles and

benzthiazoles has been achieved in excellent isolated yields under ambient conditions

using the ionic liquids, 1-butylimidazolium tetraflouroborate ([Hbim]BF4) and 1,3-di-

n-butylimidazolium tetrafluoroborate ([bbim]BF4) as reaction media and promoters

(Scheme 5.8).19

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Scheme 5.8

3) The synthesis of benzimidazoles using air as the oxidant.

Direct one-step synthesis of various benzimidazoles from phenylenediamines and

aldehydes is described using air as the oxidant (Scheme 5.9) .20

Scheme 5.9

4) Synthesis using polymer supported reagent.

Synthesis of Benzimidazole and Benzoxa/(thia)zole Libraries through Polymer-

Supported Hypervalent Iodine Reagent (Scheme 5.10). 21

Scheme 5.10

5) Cyclodextrin-promoted synthesis of 2-phenylbenzimidazole in water using air

as an oxidant.

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-Cyclodextrin-promoted conversion of o-phenylenediamine and benzaldehyde to 2-

phenylbenzimidazole is described using air as an oxidant (Scheme 5.11).22

Scheme 5.11

6) L-Proline catalyzed selective synthesis of 2-aryl-1-arylmethyl-1H-benzimidazole.

L-Proline (10 mol %) was found to be a versatile organocatalyst for the selective

synthesis of 2-aryl-1-arylmethyl-1Hbenzimidazoles from a wide range of substituted

o-phenylenediamines and aldehydes (Scheme 5.12).23

Scheme 5.12

7) Microwave-Assisted Synthesis of Benzimidazoles, Benzoxazoles, and

Benzothiazoles from Resin-Bound Esters.

Solid-phase synthesis of benzimidazoles, benzoxazoles, and benzothiazoles libraries

by microwave-assisted condensation of resin-bound esters with 1,2-

phenylenediamines, 2-aminophenols, and 2-aminothiophenols was developed

(Scheme 5.13).24

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Scheme 5.13

However, the major drawbacks of these protocols are use of specially made starting

materials, expensive and/or toxic catalyst, and adverse impact on the environment due

to the use of volatile organic solvents.

5.2.2 DESIGN AND DEVELOPMENT:

Honestly, the rationale of this study is to investigate the scope and limitations of

glycerol as alternative green reaction medium. In this sense and due to our interest on

green protocols correlated to the heterocyclic chemistry, we describe herein the use of

glycerol as a green solvent for the preparation of benzoxazole, and benzimidazole via

condensation reaction.

Intended, our preliminary condensation reaction studies, we carried out the reaction

between 2-aminophenol and benzaldehyde using glycerol as a solvent to afford the

desired benzoxazole (Scheme 5.14). A mixture of 2-aminophenol (1.0 mmol) and

benzaldehyde (1.0 mmol) in aqueous glycerol was stirred at room temperature.

Whereas the reaction using o-phenylenediamine instead of 2-aminophenol (Scheme

5.15). The reaction worked well using various substituted aldehydes furnishing the

corresponding benzimidazoles.

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Scheme 5.14

Scheme 5.14

5.2.3 EXPERIMENTAL:

General procedure for synthesis of benzoxazole derivative:

Table 2; entry 1: 2-Phenylbenzoxazole

To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of benzaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was stirred

vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 102-103OC (Lit

25a m.p: 102

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.32 (d,

2H), 7.86-7.79 (m, 1H), 7.67-7.53 (m, 4H), 7.44-7.36 (m, 2H); IR (KBr) (cm-1

): 3060,

2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020.

Table 2; entry 2: 2-p-Tolylbenzoxazole

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To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-methyl benzaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 114-115OC (Lit

7 m.p: 118-119

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.5 (m,

2H), 7.76-7.73 (m, 1H), 7.55-7.52 (m, 1H), 7.33-7.28 (m, 4H), 2.40 (s, 3H); IR (KBr)

(cm-1

): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020.

Table 2; entry 3: 2-p-nitrobenzoxazole

To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-nitro benzaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 270-272OC (Lit

8 m.p: 266-268

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.56-

7.83 (m, 8H); IR (KBr) (cm-1

): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194,

1054, 1020.

Table 2; entry 4: 2-p-Chlorobenzoxazole

To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-chlorobenzaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 150-152OC (Lit

9 m.p: 147

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.08-8.12 (m,

2H), 7.61-7.71 (m, 1H), 7.52-7.46 (m, 1H), 7.44-7.39 (m, 2H), 7.31-7.25 (m, 2H); IR

(KBr) (cm-1

): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020, 900.

Table 2; entry 5: 2-p-Bromobenzoxazole

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To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-bromo benzaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 155-156OC (Lit

10 m.p: 157-158

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.16 (m,

2H), 7.84-7.78 (m, 1H), 7.75-7.68 (m, 2H), 7.66-7.59 (m, 1H), 7.45-7.37 (m, 2H); IR

(KBr) (cm-1

): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020, 600.

Table 2; entry 6: 2-(4-Methoxyphenyl)benzoxazole

To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-methoxy benzaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 97-98OC (Lit

6 m.p: 98

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.2 (m, 2H),

7.74-7.71 (m, 1H), 7.55-7.52 (m, 1H), 7.33-7.28 (m, 2H), 7.01 (d, 2H), 3.86 (s, 3H);

IR (KBr) (cm-1

): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020.

Table 2; entry 7: 2-(Thien-2-yl)benzoxazole

To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of thiophene-2-aldehyde (0.1 gm, 0.92 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 80-82OC (Lit

6 m.p: 81-82

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 7.9 (d, 1H),

7.74-7.71 (m, 1H), 7.55-7.52 (m, 2H), 7.34-7.31 (m, 2H), 7.17 (d, 1H); IR (KBr) (cm-

1): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020.

Table 2; entry 8: 2-(Furan-2-yl)benzoxazole

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To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of furan-2-aldehyde (0.1 gm, 0.92 mmol). The reaction mixture was stirred

vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 88-90OC (Lit

11 m.p: 89-90

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 7.75 (d, 1H),

7.66 (d, 1H), 7.55 (d, 1H), 7.38-7.33 (m, 2H), 7.27 (d, 1H) 6.60 (m, 1H); IR (KBr)

(cm-1

): 3060, 2961, 1552, 1447, 1346, 1319, 1243, 1194, 1054, 1020.

Table 2; entry 9: 2-(1'-phenylethenyl)benzoxazole

To a stirred solution of 2-aminophenol (0.1 gm, 0.92 mmol) in methanol (1 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of cinnamaldehyde (0.1 gm, 0.92 mmol). The reaction mixture was stirred

vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 85-86OC (Lit

12 m.p: 83-85

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 8.6-7.82 (m,

8H), 7.58 (d, 1H), 7.42 (d, 1H); IR (KBr) (cm-1

): 3060, 2961, 1552, 1447, 1346, 1319,

1243, 1194, 1054, 1020.

General procedure for synthesis of benzimidazole derivative:

Table 2, entry 10: 2-Phenylbenzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of benzaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was stirred

vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 294-295OC (Lit

25b m.p: 295

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.92 (s,

1H), 8.20 (d, Hz, 2H), 7.68 (d, Hz, 1H), 7.58-7.48 (m, 4H), 7.23 (d, 2H); IR (KBr)

(cm-1

): 3421, 3296, 1587, 1512, 1338, 852, 744, 708

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Table 2; entry 11: 2-(p-methylPhenyl)benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-methyl benzaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 268-270OC (Lit

2 m.p: 269-270

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.90 (s,

1H), 8.00-8.08 (m, 2H), 7.60-7.20 (m, 6H), 2.30 (m, 3H); IR (KBr) (cm-1

): 3450,

3300, 1597, 1505, 1342, 850, 750, 690.

Table 2; entry 12: 2-(3-Nitrophenyl)-1H-benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-nitro benzaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 321-322OC (Lit

3 m.p: 320

oC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 13.27 (bs,

1H), 8.36-8.41 (m, 4H), 7.7 (bs, 1H), 7.57 (bs, 1H), 7.23 (m, 2H); IR (KBr) (cm-1

):

3391, 3250, 1540, 1495, 1300, 856, 744, 708

Table 2; entry 13: 2-(4-Chlorophenyl)-1H-benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-chlorobenzaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 292-295OC (Lit

3 m.p: 291

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.5 (s, 1H),

8.20 (m, 2H), 8.10 (d, 1H), 7.6 (d, 2H), 7.3 (m, 2H), 7.10 (m, 2H); IR (KBr) (cm-1

):

3041, 1450, 1402, 1280, 965, 750

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Table 2; entry 14: 2-(4-Bromophenyl)-1H-benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-bromo benzaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 296-298OC (Lit

3 m.p: 298

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.9 (bs,

1H), 8.10 (d, 2H), 7.74 (d, 2H), 7.6 (m, 2H), 7.20 (m, 2H); IR (KBr) (cm-1

): 3466,

3396, 1639, 1594, 1312, 1274, 1084, 764

Table 2; entry 15: 2-(4-Methoxyphenyl)-1H-benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of p-methoxy benzaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 225-226OC (Lit

3 m.p: 224

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.7 (s, 1H),

8.00-8.08 (m, 2H), 7.20-7.6 (m, 6H), 3.81 (m, 3H); IR (KBr) (cm-1

): 3045, 1480,

1400, 1300, 1080, 985, 760

Table 2; entry 16: 2-(Furan-2-yl)-1H-benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of furfuraldehyde (0.1 gm, 0.93 mmol). The reaction mixture was stirred

vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 306-308OC (Lit

4 m.p: 310-312

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.7

(bs, 1H), 7.94-7.93 (d, 1H), 7.58-7.54 (m, 2H), 7.21-7.18 (m, 2H), 6.74-6.72 (m, 2H);

IR (KBr) (cm-1

): 3040, 1490, 1400, 1320, 1100, 980, 760

Table 2; entry 17: 2-(Thien-2-yl)-1H-benzimidazole

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To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of thiophene2-aldehyde (0.1 gm, 0.93 mmol). The reaction mixture was

stirred vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 285-287OC (Lit

4 m.p: 288

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.7 (s, 1H),

7.85-7.83 (m, 1H), 7.73-7.69 (m, 1H), 7.57-7.53 (m, 1H), 6.82-7.03 (m, 3H); IR (KBr)

(cm-1

): 3045, 1480, 1400, 1300, 1080, 985, 760

Table 2; entry 18: 2-(1'-phenylethenyl)benzimidazole

To a stirred solution of o-phenylenediamine (0.1 gm, 0.93 mmol) in H2O (2 mL),

glycerol (5 mL) was added and the reaction mixture was heated to 90OC, followed by

addition of cinnamaldehyde (0.1 gm, 0.93 mmol). The reaction mixture was stirred

vigorously at 90OC. The progress of reaction was monitored by TLC. After

completion of reaction, the product was isolated as above procedure.

M.p. 201-203OC (Lit

5 m.p: 202

OC);

1H NMR (CDCl3, 60 MHz) δ (ppm): 12.7 (s, 1H),

7.65-7.8 (m, 3H), 7.47-7.69 (m, 2H), 7.41-7.46 (m, 2H), 7.33-7.39 (m, 1H), 7.24 (d,

1H), 7.16-7.21 (m, 2H); IR (KBr) (cm-1

): 3045, 1643, 1588, 1524, 1493, 1422, 1300,

1080, 985, 760 cm-1

5.2.4 RESULT AND DISCUSSION:

For our initial condensation reaction studies, we carried out the reaction between 2-

aminophenol and benzaldehyde using glycerol as a solvent to afford the desired

benzoxazole (Scheme 5.15). A mixture of 2-aminophenol (1.0 mmol) and

benzaldehyde (1.0 mmol) in aqueous glycerol was stirred at room temperature. It was

observed that the starting materials were consumed after long reaction time as

indicated by TLC analysis.

To optimise the reaction conditions and to afford the desired benzoxazole in good

yield, the same reaction was conducted at different reaction temperature and it was

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CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 313

observed that as temperature increases, rate of reaction increases and good amount of

yield was obtained at 90OC within 4 h (Table 1; entry 6). Again the advantage of this

protocol is, after the work-up procedure, glycerol is successfully recovered and reused

for another reaction without affecting the yields.

In order to study the effect of solvent on the rate of the reaction, we executed the same

reaction in absence of water, but the yield of the product decreased drastically (Table

1, entry 2). Next, we also carried out the same reaction in glycerol: methanol mixture

and recovered the desired product in the yield comparable to that obtained in glycerol:

water system. Thus the glycerol: methanol is a suitable solvent for this transformation.

A variety of aldehydes were condensed with 2-aminophenol and the results are

summarised in Table 2.

Scheme 5.15: Preparation of 2-arylbenzoxazole

To expand the synthetic scope of this protocol, we carried out the reaction using o-

phenylenediamine instead of 2-aminophenol (Scheme 5.16). The reaction worked

well using various substituted aldehydes furnishing the corresponding benzimidazoles

in moderate to good yields (Table 2; entries 10–18). In this case Glycerol:water

system works well.

Scheme 5.16: Preparation of 2-arylbenzimidazole

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CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 314

To study the generality of this new protocol, a variety of aromatic and heterocyclic

aldehydes with various substitution patterns were reacted with 2-aminophenol as well

as o-phenylenediamine under the optimized conditions to give benzoxazoles and

benzimidazoles respectively. As can be seen from Table 1, most of the substrates

afforded good yields of the corresponding benzoxazoles and benzimidazoles.

Heterocyclic aromatic aldehyde compounds were also suitable for this transformation

(Table 1; entries 7, 8, 17, 18) giving moderate yield.

To the best of our knowledge, the dominant mechanism for production of 2-

phenylbenzoxazole is the oxidative cyclization of phenolic Schiff bases, which are

derived from the condensation of 2-aminophenols and aldehydes. The preparation of

arylbenzoxazoles through the oxidative cyclization of phenolic Schiff bases may

involve three steps. The first step is the condensation between aromatic aldehyde 1

and o-aminophenol 2 to form Schiff base 3. The second step is the five-membered-

ring formation from 3 to 4. The third step is the cyclisation of 4 to arylbenzoxazole 5.

In steps 1 and 3, water is produced, and in the presence of water, the equilibrium of

the reaction moves backwards. Therefore, removing water and increasing the stability

of 2 under oxidative condition would be beneficial to the reaction yield and hence the

result of 2-aminophenol with aldehyde in a model reaction was good in methanol:

glycerol system rather than glycerol: water system. In the reaction system, a Schiff

base was generated from the condensation between o-aminophenol and aromatic

aldehyde in glycerol.

If we accept the aforesaid mechanism, one can expect the general effect of electron

donating and electron withdrawing groups on the feasibility of the reaction. In this

regard, aromatic aldehydes bearing electron donating groups on the benzene ring

should increase the yield of the reaction while electron withdrawing groups should

have an inverse effect. As we expect, aromatic aldehydes with electron donating

substituents and p-halogenated aromatic aldehydes afforded 2-phenylbenzoxazole

and 2-phenylbenzimidazole, which furnished comparable yields of the desired

products (Table 2, entries 2, 4-6, 11, 13-15). On the other hand, with electron-

withdrawing substituents also give moderate yield of the corresponding 2-

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CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 315

phenylbenzoxazole and 2-phenylbenzimidazole were obtained (Table 2, entry 3, 12).

In addition, we explored the scope of the reaction with heterocyclic aromatic aldehyde

compounds, and it was also suitable for this transformation (Table 1; entries 7, 8, 17,

18) giving moderate yield.

Further investigation indicates that α, β unsaturated aldehydes are also suitable for this

reaction (Table 1; entries 9, 16) without affecting the geometry of a double bond. In

general, the aromatic aldehydes containing electron-donating substituent react faster

giving better yield as compared to the aromatic aldehydes containing electron-

withdrawing substituent.

Table 1. Reaction of OPDa (1 eqiv.) or o-aminophenol b (1 eqiv.) with benzaldehyde(1 eqv.) in

glycerol at different rxn. conditions.

Entry Solvent Rxn. condition Time

(h)

Yield

(%)

1 Glycerol R T 24 NR

2 Glycerol 50OC 8 50

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Development and Application of New Methodologies for Synthesis of Bioactive Molecules 316

3 Glycerol:H2O R T 24 NRc

4 Glycerol:H2O 50 O

C 8 60

5 Glycerol:H2O 70 O

C 6 65

6 Glycerol:H2O 90 O

C 2a 70

a

4b 80

b

NRc= no reaction

Table 2. Reaction of o-aminophenol and 1,2-diaminobenzene with aldehydes in presence of glycerola

Entry

1,2

Diaminobenze

ne

Aldehyde Product Time

(h)

Yieldb

%

1

4

80

2

5

75

3

6 60

4

4 65

5

4

75

6

6

82

7

5

60

8

6

65

9

5

70

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Development and Application of New Methodologies for Synthesis of Bioactive Molecules 317

10

2

70

11

2

75

12

3

60

13

3 60

14

3 60

15

2

65

16

4 60

17

3

55

18

3

55

aReaction conditions: 1,2diamine (1 equiv), aldehydes (1equiv). bIsolated yields after column chromatography and structures were confirmed by comparison of m.p. with authentic materials.

5.2.5.1 MECHANISMS:

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CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 318

Figure xx

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CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 319

5.2.5 SUMMARY AND CONCLUSION:

Furthermore, product isolation and recycling of glycerol were conveniently achieved

by means of liquid–liquid phase extractions with ethyl acetate. These results not only

demonstrated the necessity of using glycerol as a promoting medium for organic

reactions, but also avoided the use of catalyst, thus simplifying the work-up procedure

and consequently increasing the greenness of the synthetic method. Note that in the

case of technical grade glycerol, the presence of residual free fatty acid salts may play

the role of catalyst, thus allowing the reaction to proceed better than in neat water.

Advantages of glycerol for this reaction include

(i) The non-assistance of acid catalysts, which not only simplifies the work-up

procedure and minimizes the generation of waste, but also allows the use of

acid-sensitive substrates;

(ii) Easy separation of the reaction products; and

(iii) No volatile organic solvent was used.

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5.2.6 REFERENCES:

1) For examples, see: a) Easmon, J.; Purstinger, G.; Thies, K.-S.; Heinisch, G.;

Hofmann, J.; J. Med. Chem. 2006, 49, 6343 b) Sun, L.-Q.; Chen, J.; Bruce, M.;

Deskus, J. A.; Epperson, J. R.; Takaki, K.; Johnson, G.; Iben, L.; Malhe, C. D.; Ryan,

E.; Xu, C.; Biorg. Med. Chem. Lett. 2004, 14, 3799 c) Kumar, D.; Jacob, M. R.;

Reynolds, M. B.; Kerwin, S. M.; Bioorg. Med. Chem. 2002, 10, 3997 d) McKee, M.

L.; Kerwin, S. M.; Bioorg. Med. Chem. 2008, 16, 1775 e) Oksuzoglu, E.; Tekiner-

Gulbas, B.; Alper, S.; Temiz-Arpaci, O.; Ertan, T.; Yildiz, I.; Diril, N.; Sener-Aki, E.;

Yalcin, I.; J. Enzyme Inhib. Med. Chem. 2008, 23, 37 f) Potashman, M. H.; Bready, J.;

Coxon, A.; DeMelfi, T. M. Jr.; DiPietro, L.; Doerr, N.; Elbaum, D.; Estrada, J.;

Gallant, P.; Germain, J.; Gu, Y.; Harmange, J.-C.; Kaufman, S. A.; Kendall, R.; Kim,

J. L.; Kumar, G. N.; Long, A. M.; Neervannan, S.; Patel, V. F.; Polverino, A.; Rose,

P.; van der Plas, S.; Whittington, D.; Zanon, R.; Zhao, H.; J. Med. Chem. 2007, 50,

4351 g) Huang, S.-T.; Hsei, I.-J.; Chen, C.; Bioorg. Med. Chem. 2006, 14, 6106

2) For examples, see: a) Alamgir, M.; Black, D. St. C.; Kumar, N. Synthesis, Reactivity

and Biological Activity of Benzimidazoles. In Topics In Heterocyclic Chemistry;

Springer: Berlin, Germany, 2007; Vol. 9, pp 87-118 and references cited therin b)

Skalitzky, D. J.; Marakovits, J. T.; Maegley, K. A.; Ekker, A.; Yu, X.-H.; Hostomsky,

Z.;Webber, S. E.; Eastman, B.W.; Almassy, R.; Li, J.; Curtin, N. J.; Newell, D. R.;

Calvert, A. H.; Griffin, R. J.; Golding, B. T.; J. Med. Chem. 2003, 46, 210 c) Rao, A.;

Chimirri, A.; De Clercq, E.; Monforte, A. M.; Monforte, P.; Pannecouque, C.;

Zappala, M.; Il Farmco, 2002, 57, 819 d) Valdez, J.; Cedillo, R.; Hernandez-Campos,

A.; Yepez, L.; Hernandez-Luis, F.; Navarrete-Vazques, G.; Tapia, A.; Cortes, R.;

Hernandez, M.; Castillo, R.; Bioorg. Med. Chem. Lett. 2002, 12, 2221 e) Horton, D.

A.; Bourne, G. T.; Smythe, M. L.; Chem. Rev. 2003, 103, 893 f) Yamamoto, Y.;

Mizuno, H.; Tsuritani, T.; Mase, T.; J. Org. Chem. 2009, 74, 1394 g) Bahrami, K.;

Khodaei, M. M.; Naali, F.; J. Org. Chem. 2008, 73, 6835 h) Shen, M.; Driver, T. G.;

Org. Lett. 2008, 10, 3367 i) Coffinier, D.; El Kaim, L.; Grimaud, L.; Org. Lett. 2009,

11, 995 j) Goossen, L. J.; Knauber, T.; J. Org. Chem. 2008, 73, 8631

3) For examples in medicinal chemistry, see: a) Nakano, H.; Inoue, T.; Kawasaki, N.;

Miyataka, H.; Matsumoto, H.; Taguchi, T.; Inagaki, N.; Nagai, H.; Satoh, T.; Bioorg.

Med. Chem. 2000, 8, 373 b) White, A. W.; Almassy, R.; Calvert, A. H.; Curtin, N. J.;

Griffin, R. J.; Hostomsky, Z.; Maegley, K.; Newell, D. R.; Srinivasan, S.; Golding, B.

Page 66: PART-I Introduction to Glycerol. - INFLIBNETshodhganga.inflibnet.ac.in/bitstream/10603/9231/10/10_chapter 5.pdf · PART-I Introduction to Glycerol. 5.1.1 INTRODUCTION: 5.1.2 OBJECTIVE

CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 321

T.; J. Med. Chem. 2000, 43, 4084 c) Zhao, Z.; Arnaiz, D. O.; Griedel, B.; Sakata, S.;

Dallas, J. L.; Whitlow, M.; Trinh, L.; Post, J.; Liang, A.; Morrissey, M. M.; Shaw, K.;

J. Bioorg. Med. Chem. Lett. 2000, 10, 963 d) Yoshida, S.; Shiokawa, S.; Kawano, K.;

Ito, T.; Murakami, H.; Suzuki, H.; Sato, Y.; J. Med. Chem. 2005, 48, 7075 e) Iemura,

R.; Kawashima, T.; Fukuda, T.; Ito, K.; Tsukamoto, G.; J. Med. Chem. 1986, 29, 1178

f) Lorenzi, S.; Mor, M.; Bordi, F.; Rivara, S.; Rivara, M.; Morini, G.; Bertoni, S.;

Ballabeni, V.; Barocelli, E.; Plazzi, P. V.; Bioorg. Med. Chem. 2005, 13, 5647 g)

Grobler, J. A.; Dornadula, G.; Rice, M. R.; Simcoe, A. L.; Hazuda, D. J.; Miller, M.

D.; J. Biol. Chem. 2007, 282, 8005 h) Easmon, J.; Purstinger, G.; Thies, K.-S.;

Heinisch, G.; Hofmann, J.; J. Med. Chem. 2006, 49, 6343 i) Rasmussen, K.; Hsu, M.-

A.; Yang, Y.; Neuropsychopharmacology 2007, 32, 786

4) a) Blythin, D. J.; Kaminski, J. J.; Domalski, M. S.; Spitler, J.; Salomon, D. M.; Conn,

D. J.; Wong, S. C.; Verbiar, L. L.; Bober, L. A.; Chiu, P. I. S.; Watnick, A. S.; Siegel,

M. I.; Hilbert, J. M.; McPhail, A. T.; J. Med. Chem. 1986, 29, 1099 b) Weidner-

Wells, M. A.; Ohemeng, K. A.; Nguyen, V. N.; Fraga-Spano, S.; Macielag, M. J.;

Werblood, H. M.; Foleno, B. D.; Webb, G. C.; Barrett, J. F.; Hlasta, D.; J. Bioorg.

Med. Chem. Lett. 2001, 11, 1545

5) a) Inamoto, K.; Hasegawa, C.; Hiroya, K.; Doi, T.; Org. Lett. 2008, 10, 5147 b)

Gurupadaiah, B.M.; Jayachandran, E.; Kumar, B. S.;Nagappa, A. N.; Nargund, L. V.

G.; Indian J. Heterocycl. Chem. 1998, 7, 213 c) Kashiyama, E.; Hutchinson, I.; Chua,

M. S.; Stinson, S. F.; Phillips, L. R.; Kaur,G.; Sausville, E. A.; Bradshaw, T.

D.;Westwell, A. D.; Stevens,M. F. G.; J. Med. Chem. 1999, 42, 4172 d) Boger,D. L.;

J. Org. Chem. 1978, 43, 2296 e) Ben-Alloum, A.; Bakkas, S.; Soufiaoui, M.;

Tetrahedron Lett. 1997, 38, 6395 f) Bowman, W. R.; Heaney, H.; Smith, P. H. G.:

Tetrahedron Lett. 1982, 23, 5093 g) Ma, H. C.; Jiang, X. Z.; Synlett 2008, 1335

6) a) Wu, Y. Q.; Hamilton, S. K.; Wilkinson, D. E.; Hamilton, G. S.; J. Org. Chem.

2002, 67, 7553 b) Kumar, D.; Jacob, M. R.; Reynolds, M. B.; Kerwin, S. M.; Bioorg.

Med. Chem. 2002, 10, 3997

7) a) Candeias, N. R.; Branco, L. C.; Gois, P. M. P.; Afonso, C. A. M.; Trindade, A. F.;

Chem. Rev. 2009, 109, 2703 b) Martins, M. A. P.; Frizzo, C. P.; Moreira, D. N.;

Buriol, L.; Machado, P.; Chem. Rev. 2009, 109, 4140 c) Walsh, P. J.; Li, H.; De

Parrodi, C. A.; Chem. Rev. 2007, 107, 2503

Page 67: PART-I Introduction to Glycerol. - INFLIBNETshodhganga.inflibnet.ac.in/bitstream/10603/9231/10/10_chapter 5.pdf · PART-I Introduction to Glycerol. 5.1.1 INTRODUCTION: 5.1.2 OBJECTIVE

CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 322

8) a) Kumar, R.; Selvam, C.; Kaur, G.; Chakraborti, A. K.; Synlett 2005, 1401 b) Seijas,

J. A.; Vazquez-Tato, M. P.; Carballido-Reboredo, M. R.; Crecente-Campo, J.; Romar-

Lopez, L.; Synlett 2007, 313

9) a) Chang, J. B.; Zhao, K.; Pan, S. F.; Tetrahedron Lett. 2002, 43, 951 b) Varma, R. S.;

Saini, R. K.; Prakash, O.; Tetrahedron Lett. 1997, 38, 2621 c) Park, K. H.; Jun, K.;

Shin, S. R.; Oh, S. W.; Tetrahedron Lett. 1996, 37, 8869 d) Praveen, C.; Kumar, K.

H.; Muralidharan, D.; Perumal, P. T.; Tetrahedron 2008, 64, 2369 e) Moghaddam, F.

M.; Bardajee, G. R.; Ismaili, H.; Taimoory, S. M. D.; Synth. Commun. 2006, 36, 2543

f) Kumar, A.; Maurya, R. A.; Saxena, D.; Mol. Diver. 2010, 14, 331 g) Chen, W. H.;

Pang, Y.; Tetrahedron Lett. 2009, 50, 6680 h) Liu, Y. K.; Mao, D. J.; Lou, S. J.; Qian,

J. Q.; Xu, Z. Y.; J. Zhejiang Univ. Sci., 2009, 10B, 472 i) Kawashita, Y.; Nakamichi,

N.; Kawabata, H.; Hayashi, M.; Org. Lett. 2003, 5, 3713

10) a) Barbero, N.; Carril, M.; SanMartin, R.; Dominguez, E.; Tetrahedron 2007, 63,

10425 b) Viirre, R. D.; Evinder, G.; Batey, B. A.; J. Org. Chem. 2008, 73, 3452 c)

Ueda, S.; Nagasawa, H.; Angew. Chem., Int. Ed. 2008, 47, 6411

11) Julien Bonnamour and Carsten Bolm.; Org. Lett. 2008, 10, 2665

12) Saha, P.; Ramana, T.; Purkait, N.; Ali, M. A.; Paul, R.; Punniyamurthy T.; J.

Org. Chem. 2009, 74, 8719

13) Chen, F.; Shen, C.; Yang, D.; Tetrahedron Lett. 2011, 52, 2128

14) Liu, Y. k.; Mao, S. L.; Zhen-yuan, J. Q.; Journal of Zhejiang University SCIENCE B,

2009, 10, 472

15) Fan, X.; He, Y. W.; Yangyang Zhang, X.; Wang, J.; Chin. J. Chem. 2011, 29,

773

16) Heraclio, L. R.; Horacio, B. O.; Susana, R. L.; Rosa, S.; Norberto F.; Tetrahedron

Lett. 2011, 52, 4308

17) a) Nagata, K.; Itoh, T.; Ishikawa, H.; Ohsawa, A.; Heterocycles 2003, 61, 93

b) Curini, M.; Epifano, F.; Montanari, F.; Rosati, O.; Taccone, S.; Synlett 2004,

1832 c) Chakrabarty, M.; Karmakar, S.; Ajanta, M.; Arima, S.; Harigaya, Y.;

Heterocycles 2006, 68, 967 d) Bahrami, K.; Khodaei, M. M.; Kavianinia, I.;

Synthesis 2007, 4, 547 e) Aliyan, H.; Fazaeli, R.; Fazaeli, N.; Mssah, A. R.;

Naghash, H. J.; Alizadeh, M.; Emami, G.; Heteroatom Chem. 2009, 20, 202 f)

Page 68: PART-I Introduction to Glycerol. - INFLIBNETshodhganga.inflibnet.ac.in/bitstream/10603/9231/10/10_chapter 5.pdf · PART-I Introduction to Glycerol. 5.1.1 INTRODUCTION: 5.1.2 OBJECTIVE

CHAPTER-5 PART-II SECTION-II

Development and Application of New Methodologies for Synthesis of Bioactive Molecules 323

Ma, H.; Wang, Y.; Wang, J.; Heterocycles 2006, 68, 1669 g) Zhang, Z. H.;

Yin, L.; Wang, Y. M.; Catal. Commun. 2007, 8, 1126

18) Ghotas, E.; Robert, A. B.; Org. Lett. 2003, 5, 133

19) Nadaf, R. N.; Siddiqui, S. A.; Thomas Daniel, R. J.; Lahoti, K. V.; Srinivasan.;

Journal of Molecular Catalysis A: Chemical 2004, 214,155

20) Songnian, L.; Lihu, Y.; Tetrahedron Lett. 2005, 46, 4315

21) Kumar, A.; Maurya, R. A.; Ahmad, P.; J. Comb. Chem. 2009, 11, 198

22) Hongbing, J.; Liquan, H.; Haimin Shen, X. Z.; Chemical Engineering Journal

2011, 167, 349

23) Varala, R.; Nasreen, A.; Enugala, R.; Adapa, S. R.; Tetrahedron Lett. 2007, 48,69

24) Lim, H. J.; Myung, D.; Lee, Y. C.; Jung, M. H.; J. Comb. Chem. 2008, 10, 501

25) a) Saha, P.; Ramana, T.; Purkait, N.; Ali M. D.; Paul, R.; Punniyamurthy, T.; J. Org.

Chem. 2009, 74, 8719 b) Trivedi, R.; De, S. K.; Gibbs, R. A.; J. Mol. Cat. A

Chemical, 2006, 245, 8.

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Table 2, entry 11