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1 PART I: General Information DATE PREPARED: September 22, 2016 Name: Peter Kraft Office Address: 665 Huntington Avenue Bldg 2 Room 249A Boston, MA 02115 Home Address: 54 Gold Star Road Cambridge, MA 02140 Work E-Mail: [email protected] Work FAX: (617) 432-1722 Place of Birth: Michigan, USA Education: 1993 B.A. Mathematics, University of Michigan 1993 B.A. German, University of Michigan 1996 M.A. Applied Mathematics, University of Southern California 1998 M.A. Biostatistics, University of Southern California 2002 Ph.D. Biostatistics, University of Southern California Postdoctoral Training: 2002 - 2003 Postdoctoral Fellow, Department of Biostatistics, University of California, Los Angeles, CA Academic Appointments: 1994 - 1996 Teaching Assistant, Department of Mathematics, University of Southern California, Los Angeles, CA 1997 - 1998 Research Assistant, Department of Preventive Medicine, University of Southern California, Los Angeles, CA 2003 - 2008 Assistant Professor, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA 2008 - 2012 Associate Professor, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA 2012 - Professor, Departments of Epidemiology and Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA

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Page 1: PART I: General Information - Harvard University · 2014 - Member, Harvard Operating Committee for Research Computing 2014 Member, Organizing Committee, NIH Gene-environment Interaction

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PART I: General Information DATE PREPARED: September 22, 2016 Name: Peter Kraft Office Address: 665 Huntington Avenue Bldg 2 Room 249A Boston, MA 02115 Home Address: 54 Gold Star Road Cambridge, MA 02140 Work E-Mail: [email protected] Work FAX: (617) 432-1722 Place of Birth: Michigan, USA Education:

1993 B.A. Mathematics, University of Michigan

1993 B.A. German, University of Michigan

1996 M.A. Applied Mathematics, University of Southern California

1998 M.A. Biostatistics, University of Southern California

2002 Ph.D. Biostatistics, University of Southern California

Postdoctoral Training:

2002 - 2003 Postdoctoral Fellow, Department of Biostatistics, University of California, Los Angeles, CA

Academic Appointments:

1994 - 1996 Teaching Assistant, Department of Mathematics, University of Southern California, Los Angeles, CA

1997 - 1998 Research Assistant, Department of Preventive Medicine, University of Southern California, Los Angeles, CA

2003 - 2008 Assistant Professor, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA

2008 - 2012 Associate Professor, Departments of Epidemiology and Biostatistics, Harvard School of Public Health, Boston, MA

2012 - Professor, Departments of Epidemiology and Biostatistics, Harvard T.H. Chan School of Public Health, Boston, MA

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Hospital or Affiliated Institution Appointments:

1998 - 2001 Chief Consultant, Statistical Consultation and Research Center, University of Southern California, Los Angeles, CA

1998 - 2002 Statistician, Department of Preventive Medicine, University of Southern California, Los Angeles, CA

2007 - Member, Dana-Farber/Harvard Cancer Center, Cancer Epidemiology and Biostatistics Programs

Other Professional Positions and Major Visiting Appointments:

2005 - 2008 Consultant, National Cancer Institute, Cancer Genetic Markers of Susceptibility (CGEMS) study

2006 - 2009 Consultant, National Cancer Institute, PanScan study

2009 - Associate member, Broad Institute, Cambridge, MA

2014 - 2015 Consultant, Merck & Co.

Administrative Responsibilities

2003 - 2006 Organizer, Gene × Environment Interaction Seminar Series, Harvard School of Public Health

2009 -2014 Deputy Director, Program in Genetic Epidemiology and Statistical Genetics, Harvard School of Public Health

2009 - Co-Director, Program in Quantitative Genomics, Harvard T.H. Chan School of Public Health

2014 -

Director, Program in Genetic Epidemiology and Statistical Genetics, Harvard T.H. Chan School of Public Health

2014 - Faculty Director, Harvard Bioinformatics Core

Committee Assignments:

2004 - Member, Program in Genetic Epidemiology and Statistical Genetics Admissions Committee

2004 - 2009 Member, Bioinformatics Core Advisory Group

2004 - 2006 Member, Biostatistics Seminar Series Committee

2004 - 2005 Member, Biostatistics Teaching Effectiveness Committee

2006 - 2007 Member, Biostatistics Curriculum Committee (Bioinformatics Subcommittee)

2007 - 2009 Member, HSPH Strategic Initiative in Genes and Environment Advisory Committee

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2007 - 2011 Member, Steering Committee, NHGRI PhenX Project

2007 - 2011 Liaison, Demographics Working Group

2010 - 2011 Liaison, Social Environment Working Group

2008 - 2009 Member, Program in Genetic Epidemiology and Statistical Genetics Faculty Search Committee

2009, '11, '14 Co-organizer, Program in Quantitiative Genomics Annual Conference

2010 - 2012 Member, The NIDA Genes, Environment, and Development Initiative (GEDI) Advisory Committee

2010 - 2013 Member, Gene Environment Interaction and Disparities Working Group, Harvard/MGH Center on Genomics, Vulnerable Populations and Health Disparities

2010 - 2011 Member, Harvard Catalyst Health Disparities Research Program Advisory Committee

2011 - 2012 Member, Organizing Committee, NCI Think Tank on Gene Environment Interactions

2011 - 2013 Member, Massachusetts General Hospital Analytic and Translational Genetics Unit Faculty Search Committee

2012 - 2015 Member, Department of Biostatistics Admissions Committee

2012 - Co-Chair, Steering Committee, Breast and Prostate Cancer Cohort Consortium

2012 - 2015 Chair, Analytic Working Group, NCI “post-GWAS” GAME-ON consortium

2013 - Co-Director, AACR Integrative Molecular Epidemiology Workshop

2013 - Member, Executive Committee, MS in Computational Biology and Quantitative Genetics, Harvard T.H. Chan School of Public Health

2014 - Member, Department of Biostatistics Faculty Search Committee

2014 - Member, Harvard Operating Committee for Research Computing

2014 Member, Organizing Committee, NIH Gene-environment Interaction Studies Workshop

2015 - 2016 Co-Chairperson, 2016 AACR Annual Meeting Program Committee

2015 Chair, Research Strategy Review Research Platforms Quad, Harvard T.H. Chan School of Public Health

Professional Societies:

1999 - Member, International Genetic Epidemiology Society (IGES)

2008 - 2010 Member, IGES Scientific Program Committee

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2009 - 2011 2013 - 2015

Member, IGES Board of Directors Member, IGES Publications Committee

2002 - Member, American Statistical Association

2011 Member, Byar Award Review Committee

2003 - Member, American Society for Human Genetics

2004 - Member, American Association for Cancer Research

Editorial Activities:

Editorial Boards:

2008 - 2010 Associate Editor, Cancer Causes and Control

2010 - 2012 Associate Editor, Statistics in Medicine

2011 - Member, Editorial Board, Genetic Epidemiology

2013 - Member, Editorial Board, Epidemiology

Reviewer:

2005 - 2006 Cancer Research UK

2007 - 2009 Center for Inherited Disease Research

2007 European Commission’s 7th Framework Programme for Research

2009 NIMH Special Emphasis Panel

2009 NIMH GO Grant Review Panel

2009 NINDS GO Grant Panel

2009 NCI Intramural Program Site Visit

2009 AXA Foundation

2010 Research Grants Council, Hong Kong Special Administrative Region

2010 AAAS Research Competitiveness Service

2011 American Statistical Association Byar Award Review Committee

2011 NIH Genomics, Computational, Biology, and Technology Study Section

2012 Genome Canada: 2012 Large-Scale Applied Research Project Competition in Genomics and Personalized Health

2014 Ad hoc Member, CASE/EPIC Study Section

2014 - Member, Center for Inherited Disease Research Access Committee

2015 Member, NIH-NHGRI Sequencing Review Committee

2015 Reviewer, Wellcome Trust Investigator Awards

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Ad hoc reviewer for:

American Journal of Epidemiology, American Journal of Human Genetics, Bioinformatics, Biostatistics, BMC Genetics, Breast Cancer Research, Cancer Epidemiology Biomarkers and Prevention, Cancer Research, Epidemiology, European Journal of Human Genetics, Genetic Epidemiology, Genome Medicine, Human Genetics, Human Heredity, Human Molecular Genetics, Journal of the American Medical Association, Journal of the National Cancer Institute, Nature Genetics, Nature Reviews Genetics, New England Journal of Medicine, PLoS Genetics, Proceedings of the National Academy of Sciences, Statistical Science

Awards and Honors:

1993 Magna cum laude, Mathematics, University of Michigan

1993 Magna cum laude, German, University of Michigan

2007 Junior Faculty Sabbatical Award, HSPH

2012 Inaugural Robert Welch Memorial Lecturer

2014 - 2015 Thompson-Reuters Highly Cited Researcher

Part II: Research, Teaching, and Clinical Contributions A. Narrative report of Research, Teaching, and Clinical Contributions. My research concentrates on the design and analysis of genomic association studies, with particular emphasis on studies linking variation in germline DNA to cancer risk and prognosis. I have published on haplotype analysis, genotype imputation, cost-saving multi-stage designs for genome-wide association studies (GWAS), heritability analyses using GWAS data, integrating gene-environment and gene-gene interaction into the analysis of GWAS, and genetic risk prediction. My current methodological research focuses on 1) efficient and interpretable "gene x environment interaction" analyses, 2) genetic risk prediction using common and rare genetic variation, biomarkers (including metabolites), and clinical and environmental risk factors, and 3) methods linking low-frequency variation, emerging functional annotation, and risk of complex disease. I have played a key role in multiple international consortia studying the genetics of cancer risk over the last ten years. I have been a member of the statistical working group of the Breast and Prostate Cancer Cohort Consortium (BPC3) since its inception, and am currently co-chair of the BPC3's steering committee; I played a leading role in the design and analysis of GWAS of breast, prostate and pancreatic cancers as part of the NCI’s Cancer Genetic Markers of Susceptibility and PanScan projects; and I chaired the Analytic Working Group for the NCI's "post-GWAS" GAME-ON consortium, which aimed to better understand the biological mechanisms underlying GWAS-identified cancer risk markers at five cancer sites (including breast and lung) and their public health implications. I was also the contact PI for the epidemiology project of the breast cancer arm of GAME-ON, which focuses on gene-environment interactions and risk prediction.

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B. Funding Information

1. Current funded research

2013-2018

Genetic and Environmental Risk Factors for Venous Thromboembolism NIH (BWH sub to HSPH)- R01 HL116854 PI: Kabrhel Role: Co-Investigator

2013-2018

Statistical Informatics for Cancer Research NIH/NCI- 2P01CA134294-06 PI: Lin Role: Co-Investigator

2013-2017 Prospective Study of Biomarkers and Risk Factors for ALS Incidence and Progression NIH/NINDS- 2R01NS045893 PI: Ascherio Role: Co-Investigator

2013-2017 Statistical Methods for Studies of Rare Variants NIH (sub from BWH)- R01 MH101244-01 PI: Sunyaev Role: Co-Principal Investigator

2013-2017 Boston Obesity Nutrition Research Center National Institute of Diabetes and Digestive and Kidney Diseases P30 DK046200 PI: Hu Role: Co-Investigator

2013 – 2018

Integrative Molecular Epidemiology Workshop NIH- R25 CA174664 PI: Sellers Role: Co-Investigator

2013-2018 Improving Polygenic Prediction using Large Next-generation Data Sets NIH (sub from BWH)- R01 GM105857-01A1 PI: Sunyaev Role: Co-Investigator

2014-2019

Long Term Multidisciplinary Study of Cancer in Women: The Nurses’ Health Study NIH- UM1 CA186107 PI: Stampfer Role: Co-Investigator

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2014-2019

Risk and Penetrance of Mutations from Breast Cancer Testing Panels NIH- R01 CA192393 PI: Couch Role: Site Principal Investigator

2015-2017 Quantifying and Characterizing the Shared Genetic Contribution to Common Cancers NCI- U01 CA194393 PI: Lindstroem Role: Co-Investigator

2015-2019 Inflammation and Colorectal Neoplasia NCI- R01 CA137178 PI: Chan Role: Co-Investigator

2015-2020 Metabolomics and Risk of Parkinson’s Disease National Institute of Neurological Disorders and Stroke R01 NS089619 PI: Ascherio Role: Co-Investigator

2015-2022 Statistical Methods for Analysis of Massive Genetic and Genomic Data in Cancer Research NCI- R35 CA197449 PI: Lin Role: Co-Investigator

2015 - 2017 Leveraging GxE interaction to understand pancreatic cancer and altered metabolism NIH/NCI UH2 CA191284 PI: Kraft

2015-2020 The NEIGHBORHOOD: POAG Heritable Overall Operational Database National Eye Institute 2R01 EY022305 PI: Wiggs Role: Co-Investigator

2015-2017 Identifying Genome-scale Interaction Effects in Human Traits and Diseases NHGRI R21 HG007687 PI: Aschard Role: Co-Investigator

2016-2018 Genome-wide association study for urinary and fecal incontinence in women National Institute of Child Health and Human Development R21 HD089502 PI: Penney Role: Co-Investigator

2016-2018 Leveraging Novel Multivariate Methods of Subphenotypes in Genetic Association Studies of Sjögren’s Syndrome National Institute of Dental and Craniofacial Research R03 DE025665-01A1 PI: Aschard Role: Co-Investigator

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2016-2020 Powering whole genome sequence-based genetic discovery for common human diseases NHGRI U01 HG009088 PI: Lin Role: Co-Investigator

2016-2017 Genetic Determinants of Taste Preferences and Risk of Metabolic Disease National Institute on Deafness and other Communication Disorders R03 DC013373 PI: Cornelis Role: Co-Investigator

2. Pending grants (partial)

2016-2021 Defining metabolic alterations and muscle dysfunction in early pancreatic cancer NCI- R01 CA197515-01A1 PI: Wolpin Role: Co-Investigator

2016-2021 The role of inflammation in ovarian cancer risk within the Ovarian Cancer Cohort Consortium NIH- R01 PI: Tworoger Role: Co-Investigator

2016-2019 Nutrition and Disease Prevention: Examining Polyunsaturated Fats and Risk of Amyotrophic Lateral Sclerosis ALS Association PI :Ascherio Role: Co-Investigator

3. Past funded research (partial)

1999 - 2009 Genetic Susceptibility to Endometrial Cancer NIH/NCI - R01 CA082838-06A2 PI: De Vivo Role: Co-investigator

2000 - 2008 Molecular Epidemiology of ARDS NHLBI - R01 HL060710 PI: Christiani

2003 – 2007 Breast and Prostate Cancer and Hormone Related Gene Variants NCI - U01CA098233 PI: Hunter

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2003 – 2008 2003-2013

Folate, One-Carbon Nutrients, Gene-Variants and Colon Cancer NCI - U54 CA100971 PI: Hunter Boston Obesity Nutrition Research Center NIH/NIDDK PI: Fried Role: Statistical geneticist

2004 - 2006 Statistical Software for Haplotype and Haplotype x Environment Association Studies NIEHS Center Pilot Project Grant PI: Kraft

2004 - 2008 Dietary fatty acids, PPAR-activated genes and heart disease NHLBI - RO1 HL071888 PI: Campos

2005 - 2008 Gene by environment interactions in asthma and allergies NIAID - 1R01AI056230-01A2 PI: Litonjua

2006 - 2008 Clock genes, night work, and breast cancer risk NCI - 1R01 CA114534-01 PI: Schernhammer

2006 - 2009 Measurement Errors in Cancer Epidemiology NCI - R01 CA50597 PI: Spiegelman

2007 - 2009 Genes and Environment Initiatives in Type 2 Diabetes NHGRI - U01 HG004399 PI: Hu

2007 – 2009 Cohort Study of Genetic Susceptibility to Breast Cancer NIH/NCI - R01 CA065725 PI: Hunter

2007-2012

Characterizing Genetic Susceptibility to Breast and Prostate Cancer; The BPC3 NIH/NCI (sub from BWH)- U01 CA098233 PI: Hunter Role: Statistician

2007 - 2013 Prospective Studies of Diet and Cancer in Men and Women NIH/NCI - P01 CA055075 PI: Willett Role: Statistical Geneticist

2008 - 2009 Prospective Cohort Collaborative in Pancreatic Cancer Epidemiology and Pathogenesis NCI - R01 CA124908 PI: Fuchs

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2008 - 2009 Cohort Study of Genetic Susceptibility to Cutaneous Malignant Melanoma NCI - R01 CA122838-01A2 PI: Han

2005 - 2010 Dietary and Hormonal Determinants of Cancer in Women (Core A and D) NIH/NCI - P01 CA087969 (HSPH subcontract) PI: Hankinson Role: Co-Investigator/Statistical Geneticist

2006 - 2010 Estrogen and Progesterone-Related Gene Variants and Colorectal Cancer Risk NIH/NCI - R01 CA123089 PI: Zhang Role: Co-Investigator

2008 - 2010 Genetics of Coronary Disease in Type 2 Diabetes NIH/NHLBI - R01 HL073168 PI: Doria Role: Co-Investigator

2008 -2010 Sex Steroid Hormones, Gene Variants, and Colorectal Cancer NIH - R01CA126846-01A2 PI: Lin Role: Statistician

2009 - 2010 Urate as a Predictor of Parkinson's Disease Risk and Progression NINDS - 1R01NS061858-01A1 PI: Ascherio Role: Co-Investigator

2009 -2013 Genetic Markers of CHD in Type 2 Diabetes NIH/NHLBI - R01 HL071981 PI: Qi Role: Statistician

2007 - 2011 2009-2012

Cysteine, Related Gene Variants, and Breast Cancer Risk NIH/NCI - R01 CA124857 PI: Willett Role: Statistical Geneticist Genome-Wide Association Study of Endometrial Cancer NIH/NCI (BWH sub to HSPH) - R01 CA134958 PI: Devivo Role: Co-investigator

2010-2012 Sequencing Regions Associated with Breast Cancer Risk in European and African Americans NIH- U01 HG005922-01 PI: Kraft Role: Principal Investigator

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2009 - 2012 Evaluating the Clinical Validity of Novel Gene-Environment Risk Profiles NIH/NIDDK - R21 DK084529 PI: Kraft Role: Principal Investigator

2007 – 2012 2012-2013 2012-2014 2012-2015

The Pathobiology of Nephrolithiasis NIDDK - P01 DK070756-01A1 PI: Curhan Role: Co-Investigator/Statistical Geneticist The NEIGHBORHOOD: POAG Heritable Overall Operational Database NIH/NEI (MEEI sub to HSPH) PI: Wiggs Role: Co-Investigator/Subcontract PI GWAS on Childhood Body Fatness as an Intermediate Phenotype of Breast Cancer NIH- R03 CA165131-01A1 PI: Lindström Role: Co-Investigator Methods to Identify Genetic Markers that Interact with Multiple Environmental Exposures NIH- R21 CA165920 PI: Kraft Role: Principal Investigator

2011-2015 The MedSeq Project: Integration of Whole Genome Sequencing into Clinical Care NIH/NHGRI- U01HG006500 PI: Green Role: Statistician

2012-2015 Genetic modifiers of the effect of intensive glycemic control on CVD risk NIH/NHLBI (Joslin sub to HSPH) - R01 HL110400-01 PI: Doria Role: Co-investigator/Subcontract PI

2010-2015 Dietary and Hormonal Determinants of Cancer in Women NIH (BWH sub to HSPH) - 2P01CA87969-11 PI: Hankinson Role: Co-investigator/Subcontract PI

2010 - 2015 Elucidating Loci Involved in Prostate Cancer Susceptibility NIH/NCI (USC sub to HSPH) - U19 CA148537-01 PI: Henderson Role: Principal Investigator

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2012-2016 Semiparametric Methods for Gene-environment Interaction NIH-R01 ES020337 PI: Tchetgen Role: Co-Investigator

2013-2015 Exploring the Interaction between Serum 25(OH)D, Vitamin D Metabolism Gene Variants, RNA Expression and MS Progression National Multiple Sclerosis Society- RG4875A5/1 PI: Ascherio Role: Co-Investigator

2014-2016 Genome-wide gene-caffeine interactions on risk of skin basal cell carcinoma NIH- R03 CA188568 PI: Han Role: Site Principal Investigator

2014-2016

Prioritizing Follow-up of GWAS Loci using Genetic and Functional Annotation Data NIH- R21 CA182821 PI: Lindström Role: Co-Investigator

2014-2016 Genome-wide Interactions with Diet Patterns on Long-term Weight Change NIH- R21 HL126024 PI: Qi Role: Site Principal Investigator

2010 - 2015 Discovery Biology and Risk of Inherited Variants in Breast Cancer NIH/NCI - U19 CA148065-01 Direct costs: $2,276,940 PI: Hunter Role: Co-Principal Investigator, Contact PI for Project 3

C. Report of Current Research Activities Dr. Kraft's research concentrates on the design and analysis of genetic association studies, with particular emphasis on studies linking variation in germline DNA to cancer risk. He has played a key role in multiple international consortia studying the genetics of cancer risk over the last ten years: Dr. Kraft has been a member of the statistical working group of the Breast and Prostate Cancer Cohort Consortium since its inception; he played a leading role in the design and analysis of GWAS of breast, prostate and pancreatic cancers as part of the NCI’s Cancer Genetic Markers of Susceptibility and PanScan projects; and he chaired the Analytic Working Group for the NCI's "post-GWAS" GAME-ON consortium, which aims to better understand the biological mechanisms underlying GWAS-identified cancer risk markers at five cancer sites (including breast and lung) and their public health implications. Dr. Kraft oversees the GWAS and sequencing data repository and analysis core for the Nurses' Health Study and Health Professionals Follow-up Study. This includes GWAS data on over 20,000 subjects and high-coverage whole genome sequencing data on 30 early-onset, family history positive breast cancer cases, which have been generated as part of the GAME-ON project.

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Dr. Kraft's current methodological research focuses on methods that link low-frequency variation, emerging functional annotation, and risk of complex disease, as well as genetic risk prediction using common and rare genetic variation as well as clinical and environmental risk factors. D. Report of Teaching

1. Local contributions

a. Harvard School of Public Health

2004 - 2005 Fundamental Concepts of Gene Mapping Grading Instructor (with C Lange Co-Instructor) 35 students; 30 hours / year

2005 - 2006 Statistical Genetics of Complex Human Disease Co-Instructor (with C Lange Grading Instructor) 20 students; 30 hours / year

2006 Advanced Topics in Epidemiologic Methods Grading Instructor 5 students; 15 hours / year

2006 - 2008, 2010

Analysis of Genetic Association Studies Grading Instructor 15 students; 30 hours / year

2009 Advanced Topics in the Analysis of Case Control and Cohort Studies Co-Instructor (with F Cook and E Tchetgen Co-Instructors) 60 students; 60 hours / year

2010 - Advanced Topics in the Analysis of Case Control and Cohort Studies Grading Instructor Instructor (with L. Chibnik Co-Instructor) 50 students; 60 hours/year

2010 - Genetic Epidemiology Grading Instructor (with David Hunter [2010-2011] and Liming Liang [2012-] Co-Instructor) 50 students; 60 hours/year

b. Local invited teaching presentations

2004 Finding a needle in a stack of other needles: challenges and

opportunities in human genome epidemiology Racebrook Environmental Statistics Retreat

2004 SNP selection for candidate gene association studies HSPH Bioinformatics Seminar Series

2005 HapMap progress report HSPH Bioinformatics Seminar Series

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2006 Design and analysis of whole genome association studies using unrelated subjects HSPH Bioinformatics Mini-Course

2007 Analysis of gene-environment interactions Guest lecturer, EPI222: Genetic Epidemiology of Diabetes and its Complications

2007 Analysis of gene-environment interactions Guest lecturer, ID221: Nutritional Epidemiology II

2007 Design of multi-stage genome-wide association studies HSPH Bioinformatics Mini-Course Guest lecturer, BIO292: Introductory Genomics and Bioinformatics for Health Research

2008 Double dipping allowed? Genome-wide scans for secondary trait loci in case-control samples Broad Institute Medical and Population Genetics Seminar Series

2009 Nature and Nurture: Gene-environment ‘interactions’ in genome-wide association studies Boston Obesity Nutrition Research Center, Obesity Gene-Environment Interaction Workshop

2009 Inherited Risk and Prognostic Prediction – An Emerging Clinical Imperative? DF/HCC Cancer Symposium

2009 Nature and Nurture: Gene-environment ‘interactions’ in genome-wide association studies A Primer on Complex Trait Genetics: Principles for the Clinical Investigator, Broad Institute

2009 Imputation and Meta-analysis for Genome-Wide and Candidate Gene Association Studies PQG Tutorials on Computational Tools for Analyzing Genomic and Proteomic Data

2009 Finding genetic determinants of complex traits - and what to do with them HSPH Summer Program in Quantitative Sciences

2009 Gene-environment and gene-gene interactions Broad Primer on Medical and Population Genetics

2009 Analysis of gene-environment interactions Guest lecturer, ID221: Nutritional Epidemiology II

2010 Nature and Nurture: Gene-environment ‘interactions’ in genetic association studies A Primer on Complex Trait Genetics: Principles for the Clinical Investigator, Broad Institute

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2011 2012 2013 2014

Gene-Environment Interactions in Genome-Wide Association Studies Guest lecturer, ID542: Methods for Mediation and Interaction Gene-Environment Interactions in Genome-Wide Association Studies Guest lecturer, ID542: Methods for Mediation and Interaction Targeted Sequencing of GWAS-identified Breast Cancer Regions and Pilot Whole-genome Sequencing of Early Onset Breast Cancer Cases Broad Institute Medical and Population Genetics Seminar Series A Comprehensivr Survey of Genetic Variation in over 19,000 Subjects from the Nurses’ Health Study, Nurses’ Health Study 2, and Health Professionals Follow-up Study Program in Genetic Epidemiology and Statistical Genetics Seminar Series, Harvard School of Public Health

2014 Theory and Practice of Genetic Risk Prediction Genomic Medicine and the Bioeconomy, Executive and Continuing Professional Education Short Course, Harvard School of Public Health

2015 Analysis of rare variants in sequencing association studies and mediation analysis Guest lecturer, BIO257: Advanced Statistical Genetics

2016 Quantifying and functionally characterizing the genetic contribution to common cancers: Results from the OncoArray study of ca. 500,000 subjects Program in Genetic Epidemiology and Statistical Genetics Seminar Series, Harvard T.H. Chan School of Public Health

2016 Quantifying and functionally characterizing the genetic contribution to breast cancer: implications for screening Dana-Farber Cancer Institute Genetics Research Seminar

c. Advisees and trainees

Duration of Training

Name Current Position or Research Topic

2004 -2010 Yu-Chun (Jean) Yen ScD, Epidemiology

2004 - 2010 Genevieve Monsees ScD, Epidemiology

Postdoctoral fellow, Fred Hutchinson Cancer Research Center

2004 - 2010 Fangyi Gu ScD, Epidemiology

Postdoctoral fellow, National Cancer Institute Division of Cancer Epidemiology and Genetics

2004 - 2005 Monica Ter-Minassian MS, Epidemiology

Postdoctoral fellow, HSPH

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2004 - 2006 Deanna Petrochilos MS, Epidemiology

PhD Candidate, Biomedical and Health Informatics, University of Washington School of Medicine

2005 - 2006 Oemer Goek MPH, Quantitative Methods

2005 - 2007 Helen Shih MPH, Quantitative Methods

2007 - 2010 Ying Feng MS, Epidemiology

2008 - 2010 Wen Lin MS, Epidemiology

2008 - 2010 Sara Lindström Postdoctoral Fellow

Assisitant Professor, University of Washington School of Public Health

2009- 2011 Mousheng Xu Postdoctoral Fellow

Hubei Vidagen Gene Technology Co., LTD. (Founder & CEO)

2009 -2013 Linda Hiraki ScD, Epidemiology

Clinician-Scientist, Division of Rheumatology and Scientist-Track investigator, Child Health Evaluative Sciences program, the Hospital for Sick Children (Toronto).

2010-2013 Hugues Aschard Postdoctoral Fellow

Assistant Professor, Institut Pasteur

2010 -2015 Akweley Ablorh ScD, Epidemiology

Application Scientist, WuXi NextCODE

2011 - 2014 Amit Joshi Postdoctoral Fellow

Instructor, Brigham and Womens Hospital. Boston

2011 - 2013

Chen Wu Postdoctoral Fellow

Assistant Professor, Cancer Institute and Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing

2012-2015 Deanna Alexis Carere ScD, Epidemiology

Postdoctoral Fellow, McMaster University

2013-2015 Chi Gao MS, Epidemiology

ScD Candidate, Department of Epidemiology, Harvard T.H. Chan School of Public Health

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2014 - Emily Slade PhD, Biostatistics

2014 - Mark Chaffin MS, Computational Biology

2014 - Reiko Nishihara MS, Computational Biology

2015 - Chi Gao ScD, Epidemiology

2015 - Helian Feng MS, Computational Biology

2015 - Abhinav Reddy MS, Computational Biology

2015 - Marie Anand MS, Computational Biology

2016 - Xia Jiang Postdoctoral Fellow

2016- Juan Juan Visiting Graduate Student

2016- Jihye Kim Postdoctoral Fellow

d. Doctoral dissertation committee membership

2003 - 2004 Monica McGrath, Epidemiology

2003 - 2004 Jennifer Pai, Epidemiology

2004 Yadong Yang, Environmental Health

2004 - 2006 Amy Murphy, Biostatistics

2004 - 2005 Stephanie Chiuve, Nutrition

2005 - 2006 Edward Ruiz-Navaerez, Epi and Nutrition

2005 - 2008 Ruy Lopez Ridaura, Nutrition

2006 - 2008 Kathryn Penney, Epidemiology

2006 - 2008 Jennifer Stark-Rider, Epidemiology

2006 - 2008 Christine Jesser, Epidemiology

2007 - 2009 Chunyan He, Epidemiology

2007 - 2008 Jessica Paulus, Epidemiology

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2007 - 2008 Julia DiBello, Epidemiology (Brown University)

2007 Shun-Chiao Chang, Epidemiology

2007 - 2008 Julie Kasperzyk, Epidemiology

2009 - 2011 Rain Cui, Biostatistics

2009 - 2010 Stalo Karageorgi, Epidemiology

2009 -2011 Gourab De, Biostatistics

2010 - 2011 Irene Shui, Epidemiology

2010 -2012 Margaret Du, Epidemiology

2010 - 2013 Cindy Lin, Biostatistics

2011 -2012 Mitchell Machiela, Epidemiology

2011 - 2013 Chia-yen Chen, Epidemiology

2011 - 2012 2013 - 2014 2013 - 2014

Alan Fung, Epidemiology Guido Falcone, Epidemiology Ian Barnett, Biostatistics

2014 - Godwin Yung, Biostatistics

2014 - Richard Barfield, Biostatistics

2015 - Anne Feng, Epidemiology

e. Master’s thesis reader

2008-2009 Pallavi Mishra, Epidemiology

2010 - 2011 Yuan-chi Chen, Epidemiology

2014 - 2015 Chi Gao, Epidemiology

2. Regional, national, and international invited contributions

a. Regional

2006 Case-control studies of single loci: basic analyses NCI Core Genotyping Facility Mini-Course (Bethesda, MD)

2009 Genome-wide association studies and cancer: what we've learned, and what we haven't learned (yet) UMass-Amherst SPHHS Joint BIO/EPI Seminar Series (Amherst, MA)

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2010 Newly Identified Common Alleles Associated with Breast Cancer Incidence: Implications for Risk Prediction and Prevention Translating Emerging Science to Reduce Breast Cancer Disparities The Biological and Social Implications of Targeted Tests and Treatments, Harvard Medical School (Boston, MA)

2010 2012

Genome-wide association studies and personalized medicine Grand Rounds, Leonard Morse Hospital (Natick, MA) Statistical Methods for Assessing Gene-Environment Interactions Gene-Environment and Disparities Research Workshop Series, The Harvard Catalyst Health Disparities Research Program (Boston, MA)

b. National

2005 Haplotypes in studies of gene environment interaction HapMap and the Neurogenetics of Alcoholism Workshop (Washington, DC)

2005 SNP selection for candidate gene association studies AACR Annual Meeting (Anaheim, CA)

2006 Accounting for etiologic heterogeneity in design and analysis of case-control studies University of Southern California (Los Angeles, CA)

2006 Genome-wide and candidate gene association studies for transplantation Scripps Institute (La Jolla, CA)

2006 Two-Stage Genome-Wide Association Designs Based on False Positive Report Probabilities Pacific Symposium on Biocomputing (Maui, HI)

2006 Allowing for etiologic heterogeneity by disease subtype increases the power of tests for genetic association Joint Statistical Meetings (Seattle WA)

2008 Design, Analysis, and Interpretation of Genome-Wide Association Studies AACR Special Conference on Genome-Wide Association and Pathway Studies (Carefree, AZ)

2008 Short course: Design and Analysis of Genome-Wide Association Studies Eastern North American Meeting (Arlington, VA)

2008 ‘I'm not sure I'm Agnostic’: Incorporating ‘Known’ Biology into Analysis and Interpretation of Genome-wide Association Studies DIMACS Workshop on Computational Issues in Genetic Epidemiology (New Brunswick, NJ)

2009 GWAS and Risk Assessment 100th AACR Annual Meeting (Denver, CO)

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2009

Nature and Nurture: Conducting, Analyzing and Interpreting Gene-Environment Interaction Centers for Disease Control University Training Course

2009 Statistical Issues in Building and Evaluating Genetic Risk Predictors Organizer/Chair, Invited Section on Statistics in Epidemiology, Biopharmaceutical Section JSM Annual Meeting (Washington, DC)

2009 The GWAS perspective: indentifying subtypes and improving risk prediction NCI Workshop on Integration of Genomic and Somatic Data (Dec) (Bethesda, MD)

2009 Assessing the incremental value of genetic risk markers beyond clinical risk factors Human Genome Epidemiology Network (HuGENet) Workshop: Strengthening the Reporting of Genetic RIsk Prediction Studies (GRIPS) (Atlanta, GA)

2010 Statistical Interaction in Observational and Clinical Studies: Challenges and Limitations NIH Genes, Environment and Health Initiative Workshop on Gene-Environment Interplay in Common Complex Diseases: Forging an Integrative Model (Bethesda, MD)

2010 Gene-environment Interactions in Observational and Clinical Studies: Challenges and Limitations NIG Next Generation Analytic Tools for Large Scale Genetic Epidemiology Studies of Complex Diseases Workshop (Bethesda, MD)

2011 Gene-environment Interactions in Observational and Clinical Studies: Challenges and Limitations Brain Tumor Epidemiology Consortium (San Francisco, CA)

2012 Leveraging Gene‑Gene and Gene‑Environment Interactions to understand Cancer Risk The 2012 Robert Welch Memorial Lecture Laboratory of Translational Genomics, NCI Division of Cancer Epidemiology and Genetics (Gaithersberg MD)

2012 State of Science: Gene-Environment Interactions in Breast Cancer NCI Think Tank on Gene-Environment Interactions (Bethesda MD)

2012

Gene-environment interactions in cancer: state of the science and implications for understanding cancer risk AACR Annual Meeting Educational Session: "Beyond GWAS: Gene, Environment and rare variants" (Chicago IL)

2012 Deep targeted sequencing of 12 breast cancer loci in 4,700 women across four different ethnicities. ASHG Annual Meeting (San Francisco CA)

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2013 2013 2013 2013 2013

Challenges in the study of gene-gene and gene-environment interactions in complex diseases University of Alabama Seminar Series (Birmingham, AL) Challenges in the study of gene-gene and gene-environment interactions in complex disease Biostatistics Seminar Series, University of Texas School of Public Health (Houston, TX) The Genetic Epidemiology of Breast Cancer: Recent Advances, Future Opportunities, Statistical Challenges Biostatistics and Medical Informatics Seminar Series, University of Wisconsin School of Medicine and Public Health (Madison, WI) Analysis of Rare Variation: Exome and Whole Genome Data Making Sense of the Sequence: Applications in Population Sciences Workshop, National Cancer Institute (Rockville, MD) The Epidemiology of Gene-Environment Interplay in Cancer National Cancer Institute Short Course (Rockville, MD)

2014 Recent findings from cancer genetic epidemiology: implications for personalized medicine, novel treatment Human Genetics Seminar Series, University of California, Los Angeles (Los Angeles, CA)

2014 Integrating Data Across Domains: Statistical considerations AACR Annual Meeting Educational Session, "Integrative Molecular Epidemiology" (San Diego, CA)

2014

Genome-wide Association Studies "Post GWAS" AACR Annual Meeting (San Diego, CA)

2014 Risk Prediction Using Whole-Genome Data: Methods and Prospects Joint Statistical Meetings (Boston, MA)

2014 Ongoing Genome-wide Cancer Risk Marker Discovery Efforts and Their Implications for Risk Modeling CISNET Annual Meeting (Shady Grove, MA)

2015 Genome-wide association studies in the “post-GWAS” era: further discovery, biological insight, and translation Dartmouth College (Hanover, NH)

2015 Genome-wide association studies in the “post-GWAS” era: further discovery, biological insight, and translation Medical College of the Universiy of South Carolina (Charleston, SC)

2016 Functional Enrichment and In Silico Fine Mapping Functional Genomics of Cancer Susceptibility (Tampa FL)

2016 Memorial Sloan-Kettering Cancer Center Symposium (New York, NY)

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2016 Adding polygenic risk scores to breast cancer risk prediction models: recent advances and future prospects National Cancer Institute DBS Seminar Series (Washington, D.C.)

c. International

2004 Haplotypes in studies of gene environment interaction International Conference on Analysis of Genomic Data (Boston, MA)

2004 Sources of measurement error in haplotype tagging studies of complex disease Joint Statistical Meetings (Toronto, Canada)

2004 Efficient two-stage genome-wide association designs based on False Positive Report Probabilities International Genetic Epidemiology Society Meeting (Noordwijkerhout, the Netherlands)

2005 Integrating epidemiology and genetic association The Royal Society (London, United Kingdom)

2005 Design and analysis of candidate gene association studies using 'tagging SNPs' Samuel Lunenfeld Research Institute (Toronto, Canada)

2005 Genome-wide association scans for prostate and breast cancer: design and analysis International Genetic Epidemiology Society Meeting (Park City, UT)

2007 From candidate genes to pathways to the whole genome: large-scale genetic association studies of prostate cancer: prospects and preliminary results AACR/JCA In the Forefront of Basic and Translational Cancer Research Conference (Waikoloa, HI)

2007 Leveraging the Environment to Find Complex Disease Genes International Genetic Epidemiology Society Meeting (York, England)

2007 What a difference a year makes: Lessons learned from early genome-wide association scans and their implications for cancer treatment and prevention Panhellenic Anticancer Congress (Athens, Greece)

2008 Genome-Wide Association Scans (GWAS): Past, Present and Future International Biometric Society Meeting (Munich, Germany)

2008 Crystal Ball, Magic 8 Ball, or Both? Statistical Issues in Building and Evaluating Genetic Risk Prediction Models International Genetic Epidemiology Society (St. Louis, MO)

2009 Nature and Nurture: Gene-environment ‘interactions’ in genome-wide association studies 3rd Paris Workshop on Genomic Epidemiology (Paris, France)

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2010 Measure Twice, Cut Once: Is individualized prevention important and practical? Joint Congress of the German Society for Social Medicine and Prevention, the German Society for Epidemiology and the European Union of Medicine in Assurance and Social Security (Berlin, Germany)

2011 Finding hidden heritability for complex diseases using linear mixed models: Lessons learned in the school of hard knocks Canadian Genetic Epidemiology Meeting (Toronto, Canada)

2011 Methods for Genome-Wide Gene-Environment Interaction Scans Karolinska Institue Meeting on GxE interactions (Stockholm, Sweden)

2012 Combining –omics: challenges and possible solutions Capita Selecta in Complex Disease Analysis (Liege, Belgium)

2015 Challenges Studying Gene-Gene and Gene-Environment Interaction CIFAR Child and Brain Development Program (Toronto, Canada)

2015 Genome-wide association studies in the “post-GWAS” era: further discovery, biological insight, and translation Cancer Institute and Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College (Beijing, China)

2016 CIHR STAGE International Speaker Seminar Series (Toronto, Canada)

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Bibliography (431 total peer-reviewed articles)

Original Articles

1. Heerema, N.A., H.N. Sather, M.G. Sensel, P. Kraft, J.B. Nachman, P.G. Steinherz, B.J. Lange, R.S. Hutchinson, G.H. Reaman, M.E. Trigg, D.C. Arthur, P.S. Gaynon, and F.M. Uckun, Frequency and clinical significance of cytogenetic abnormalities in pediatric T-lineage acute lymphoblastic leukemia: a report from the Children's Cancer Group. J Clin Oncol, 1998. 16(4): p. 1270-8.

2. Waurzyniak, B.J., N. Heerema, M.G. Sensel, P.S. Gaynon, P. Kraft, H.N. Sather, L. Chelstrom, G.H. Reaman, and F.M. Uckun, Distinct in vivo engraftment and growth patterns of t(1;19)+/E2A-PBX1+ and t(9;22)+/BCR-ABL+ human leukemia cells in SCID mice. Leuk Lymphoma, 1998. 32(1-2): p. 77-87.

3. Uckun, F.M., M.G. Sensel, H.N. Sather, P.S. Gaynon, D.C. Arthur, B.J. Lange, P.G. Steinherz, P. Kraft, R. Hutchinson, J.B. Nachman, G.H. Reaman, and N.A. Heerema, Clinical significance of translocation t(1;19) in childhood acute lymphoblastic leukemia in the context of contemporary therapies: a report from the Children's Cancer Group. J Clin Oncol, 1998. 16(2): p. 527-35.

4. Uckun, F.M., J.B. Nachman, H.N. Sather, M.G. Sensel, P. Kraft, P.G. Steinherz, B. Lange, R. Hutchinson, G.H. Reaman, P.S. Gaynon, and N.A. Heerema, Clinical significance of Philadelphia chromosome positive pediatric acute lymphoblastic leukemia in the context of contemporary intensive therapies: a report from the Children's Cancer Group. Cancer, 1998. 83(9): p. 2030-9.

5. Uckun, F.M., J.B. Nachman, H.N. Sather, M.G. Sensel, P. Kraft, P.G. Steinherz, B. Lange, R. Hutchinson, G.H. Reaman, P.S. Gaynon, and N.A. Heerema, Poor treatment outcome of Philadelphia chromosome-positive pediatric acute lymphoblastic leukemia despite intensive chemotherapy. Leuk Lymphoma, 1999. 33(1-2): p. 101-6.

6. Siegmund, K.D., B. Langholz, P. Kraft, and D.C. Thomas, Testing linkage disequilibrium in sibships. Am J Hum Genet, 2000. 67(1): p. 244-8.

7. Kraft, P. and D.C. Thomas, Bias and efficiency in family-based gene-characterization studies: conditional, prospective, retrospective, and joint likelihoods. Am J Hum Genet, 2000. 66(3): p. 1119-31.

8. Sherwin, R.P., V. Richters, P. Kraft, and A. Richters, Centriacinar region inflammatory disease in young individuals: a comparative study of Miami and Los Angeles residents. Virchows Arch, 2000. 437(4): p. 422-8.

9. Kraft, P., A robust score test for linkage disequilibrium in general pedigrees. Genet Epidemiol, 2001. 21 Suppl 1: p. S447-52.

10. Kraft, P. and M. Wilson, Family-based association tests incorporating parental genotypes. Am J Hum Genet, 2002. 71(5): p. 1238-9; author reply 1240-2.

11. Kang, T., P. Kraft, W.J. Gauderman, and D. Thomas, Multiple imputation methods for longitudinal blood pressure measurements from the Framingham Heart Study. BMC Genet, 2003. 4 Suppl 1: p. S43.

12. Kraft, P., L. Bauman, J.Y. Yuan, and S. Horvath, Multivariate variance-components analysis of longitudinal blood pressure measurements from the Framingham Heart Study. BMC Genet, 2003. 4 Suppl 1: p. S55.

13. Allen, E., S. Horvath, F. Tong, P. Kraft, E. Spiteri, A.D. Riggs, and Y. Marahrens, High concentrations of long interspersed nuclear element sequence distinguish monoallelically expressed genes. Proc Natl Acad Sci U S A, 2003. 100(17): p. 9940-5.

14. Kraft, P., E. Schadt, J. Aten, and S. Horvath, A family-based test for correlation between gene expression and trait values. Am J Hum Genet, 2003. 72(5): p. 1323-30.

15. Tamimi, R.M., S.E. Hankinson, D. Spiegelman, P. Kraft, G.A. Colditz, and D.J. Hunter, Common ataxia telangiectasia mutated haplotypes and risk of breast cancer: a nested case-control study. Breast Cancer Res, 2004. 6(4): p. R416-22.

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16. Kraft, P. and D.C. Thomas, Case-sibling gene-association studies for diseases with variable age at onset. Stat Med, 2004. 23(23): p. 3697-712.

17. Kraft, P., C.G. Palmer, A.J. Woodward, J.A. Turunen, S. Minassian, T. Paunio, J. Lonnqvist, L. Peltonen, and J.S. Sinsheimer, RHD maternal-fetal genotype incompatibility and schizophrenia: extending the MFG test to include multiple siblings and birth order. Eur J Hum Genet, 2004. 12(3): p. 192-8.

18. Kraft, P., Multiple comparisons in studies of gene x gene and gene x environment interaction. Am J Hum Genet, 2004. 74(3): p. 582-4; author reply 584-5.

19. Cox, D.G., S.E. Hankinson, P. Kraft, and D.J. Hunter, No association between GPX1 Pro198Leu and breast cancer risk. Cancer Epidemiol Biomarkers Prev, 2004. 13(11 Pt 1): p. 1821-2.

20. Cox, D.G., P. Kraft, S.E. Hankinson, and D.J. Hunter, Haplotype analysis of common variants in the BRCA1 gene and risk of sporadic breast cancer. Breast Cancer Res, 2005. 7(2): p. R171-5.

21. Murphy, A., M.B. McQueen, J. Su, P. Kraft, R. Lazarus, N.M. Laird, C. Lange, and K. Van Steen, Genomic screening in family-based association testing. BMC Genet, 2005. 6 Suppl 1: p. S115.

22. McQueen, M.B., A. Murphy, P. Kraft, J. Su, R. Lazarus, N.M. Laird, C. Lange, and K. Van Steen, Comparison of linkage and association strategies for quantitative traits using the COGA dataset. BMC Genet, 2005. 6 Suppl 1: p. S96.

23. Kraft, P., D.G. Cox, R.A. Paynter, D. Hunter, and I. De Vivo, Accounting for haplotype uncertainty in matched association studies: a comparison of simple and flexible techniques. Genet Epidemiol, 2005. 28(3): p. 261-72.

24. Paynter, R.A., S.E. Hankinson, G.A. Colditz, P. Kraft, D.J. Hunter, and I. De Vivo, CYP19 (aromatase) haplotypes and endometrial cancer risk. Int J Cancer, 2005. 116(2): p. 267-74.

25. Hunter, D.J., E. Riboli, C.A. Haiman, D. Albanes, D. Altshuler, S.J. Chanock, R.B. Haynes, B.E. Henderson, R. Kaaks, D.O. Stram, G. Thomas, M.J. Thun, H. Blanche, J.E. Buring, N.P. Burtt, E.E. Calle, H. Cann, F. Canzian, Y.C. Chen, G.A. Colditz, D.G. Cox, A.M. Dunning, H.S. Feigelson, M.L. Freedman, J.M. Gaziano, E. Giovannucci, S.E. Hankinson, J.N. Hirschhorn, R.N. Hoover, T. Key, L.N. Kolonel, P. Kraft, L. Le Marchand, S. Liu, J. Ma, S. Melnick, P. Pharaoh, M.C. Pike, C. Rodriguez, V.W. Setiawan, M.J. Stampfer, E. Trapido, R. Travis, J. Virtamo, S. Wacholder, and W.C. Willett, A candidate gene approach to searching for low-penetrance breast and prostate cancer genes. Nat Rev Cancer, 2005. 5(12): p. 977-85.

26. Chen, Y.C., E. Giovannucci, R. Lazarus, P. Kraft, S. Ketkar, and D.J. Hunter, Sequence variants of Toll-like receptor 4 and susceptibility to prostate cancer. Cancer Res, 2005. 65(24): p. 11771-8.

27. Kraft, P., H.J. Hsieh, H.J. Cordell, and J. Sinsheimer, A conditional-on-exchangeable-parental-genotypes likelihood that remains unbiased at the causal locus under multiple-affected-sibling ascertainment. Genet Epidemiol, 2005. 29(1): p. 87-90.

28. Litonjua, A.A., K. Belanger, J.C. Celedon, D.K. Milton, M.B. Bracken, P. Kraft, E.W. Triche, D.L. Sredl, S.T. Weiss, B.P. Leaderer, and D.R. Gold, Polymorphisms in the 5' region of the CD14 gene are associated with eczema in young children. J Allergy Clin Immunol, 2005. 115(5): p. 1056-62.

29. Kraft, P., P. Pharoah, S.J. Chanock, D. Albanes, L.N. Kolonel, R.B. Hayes, D. Altshuler, G. Andriole, C. Berg, H. Boeing, N.P. Burtt, B. Bueno-de-Mesquita, E.E. Calle, H. Cann, F. Canzian, Y.C. Chen, D.E. Crawford, A.M. Dunning, H.S. Feigelson, M.L. Freedman, J.M. Gaziano, E. Giovannucci, C.A. Gonzalez, C.A. Haiman, G. Hallmans, B.E. Henderson, J.N. Hirschhorn, D.J. Hunter, R. Kaaks, T. Key, L. Le Marchand, J. Ma, K. Overvad, D. Palli, M.C. Pike, E. Riboli, C. Rodriguez, W.V. Setiawan, M.J. Stampfer, D.O. Stram, G. Thomas, M.J. Thun, R. Travis, A. Trichopoulou, J. Virtamo, and S. Wacholder, Genetic variation in the HSD17B1 gene and risk of prostate cancer. PLoS Genet, 2005. 1(5): p. e68.

30. Cox, D.G. and P. Kraft, Quantification of the power of Hardy-Weinberg equilibrium testing to detect genotyping error. Hum Hered, 2006. 61(1): p. 10-4.

31. Cox, D.G., H. Blanche, C.L. Pearce, E.E. Calle, G.A. Colditz, M.C. Pike, D. Albanes, N.E. Allen, P. Amiano, G. Berglund, H. Boeing, J. Buring, N. Burtt, F. Canzian, S. Chanock, F. Clavel-Chapelon, H.S.

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Feigelson, M. Freedman, C.A. Haiman, S.E. Hankinson, B.E. Henderson, R. Hoover, D.J. Hunter, R. Kaaks, L. Kolonel, P. Kraft, L. LeMarchand, E. Lund, D. Palli, P.H. Peeters, E. Riboli, D.O. Stram, M. Thun, A. Tjonneland, D. Trichopoulos, and M. Yeager, A comprehensive analysis of the androgen receptor gene and risk of breast cancer: results from the National Cancer Institute Breast and Prostate Cancer Cohort Consortium (BPC3). Breast Cancer Res, 2006. 8(5): p. R54.

32. Kraft, P., Efficient two-stage genome-wide association designs based on false positive report probabilities. Pac Symp Biocomput, 2006: p. 523-34.

33. Miller, K.L., M.R. Karagas, P. Kraft, D.J. Hunter, P.J. Catalano, S.H. Byler, and H.H. Nelson, XPA, haplotypes, and risk of basal and squamous cell carcinoma. Carcinogenesis, 2006. 27(8): p. 1670-5.

34. Koushik, A., P. Kraft, C.S. Fuchs, S.E. Hankinson, W.C. Willett, E.L. Giovannucci, and D.J. Hunter, Nonsynonymous polymorphisms in genes in the one-carbon metabolism pathway and associations with colorectal cancer. Cancer Epidemiol Biomarkers Prev, 2006. 15(12): p. 2408-17.

35. Feigelson, H.S., D.G. Cox, H.M. Cann, S. Wacholder, R. Kaaks, B.E. Henderson, D. Albanes, D. Altshuler, G. Berglund, F. Berrino, S. Bingham, J.E. Buring, N.P. Burtt, E.E. Calle, S.J. Chanock, F. Clavel-Chapelon, G. Colditz, W.R. Diver, M.L. Freedman, C.A. Haiman, S.E. Hankinson, R.B. Hayes, J.N. Hirschhorn, D. Hunter, L.N. Kolonel, P. Kraft, L. LeMarchand, J. Linseisen, W. Modi, C. Navarro, P.H. Peeters, M.C. Pike, E. Riboli, V.W. Setiawan, D.O. Stram, G. Thomas, M.J. Thun, A. Tjonneland, and D. Trichopoulos, Haplotype analysis of the HSD17B1 gene and risk of breast cancer: a comprehensive approach to multicenter analyses of prospective cohort studies. Cancer Res, 2006. 66(4): p. 2468-75.

36. Sokol, R.Z., P. Kraft, I.M. Fowler, R. Mamet, E. Kim, and K.T. Berhane, Exposure to environmental ozone alters semen quality. Environ Health Perspect, 2006. 114(3): p. 360-5.

37. McGrath, M., I.M. Lee, S.E. Hankinson, P. Kraft, D.J. Hunter, J. Buring, and I. De Vivo, Androgen receptor polymorphisms and endometrial cancer risk. Int J Cancer, 2006. 118(5): p. 1261-8.

38. Pai, J.K., P. Kraft, C.C. Cannuscio, J.E. Manson, K.M. Rexrode, C.M. Albert, D. Hunter, and E.B. Rimm, Polymorphisms in the CC-chemokine receptor-2 (CCR2) and -5 (CCR5) genes and risk of coronary heart disease among US women. Atherosclerosis, 2006. 186(1): p. 132-9.

39. Govindarajulu, U.S., D. Spiegelman, K.L. Miller, and P. Kraft, Quantifying bias due to allele misclassification in case-control studies of haplotypes. Genet Epidemiol, 2006. 30(7): p. 590-601.

40. Han, J., P. Kraft, G.A. Colditz, J. Wong, and D.J. Hunter, Melanocortin 1 receptor variants and skin cancer risk. Int J Cancer, 2006. 119(8): p. 1976-84.

41. Kraft, P., Y.C. Yen, D.O. Stram, J. Morrison, and W.J. Gauderman, Exploiting gene-environment interaction to detect genetic associations. Hum Hered, 2007. 63(2): p. 111-9.

42. Tamimi, R.M., D.G. Cox, P. Kraft, M.N. Pollak, C.A. Haiman, I. Cheng, M.L. Freedman, S.E. Hankinson, D.J. Hunter, and G.A. Colditz, Common genetic variation in IGF1, IGFBP-1, and IGFBP-3 in relation to mammographic density: a cross-sectional study. Breast Cancer Res, 2007. 9(1): p. R18.

43. Schumacher, F.R. and P. Kraft, A Bayesian latent class analysis for whole-genome association analyses: an illustration using the GAW15 simulated rheumatoid arthritis dense scan data. BMC Proc, 2007. 1 Suppl 1: p. S112.

44. Gu, F., G. Monsees, and P. Kraft, Exhaustive screens for disease susceptibility loci incorporating statistical interaction of genotypes: a comparison of likelihood-ratio-based and Akaike and Bayesian information criteria-based methods. BMC Proc, 2007. 1 Suppl 1: p. S25.

45. Schumacher, F.R., H.S. Feigelson, D.G. Cox, C.A. Haiman, D. Albanes, J. Buring, E.E. Calle, S.J. Chanock, G.A. Colditz, W.R. Diver, A.M. Dunning, M.L. Freedman, J.M. Gaziano, E. Giovannucci, S.E. Hankinson, R.B. Hayes, B.E. Henderson, R.N. Hoover, R. Kaaks, T. Key, L.N. Kolonel, P. Kraft, L. Le Marchand, J. Ma, M.C. Pike, E. Riboli, M.J. Stampfer, D.O. Stram, G. Thomas, M.J. Thun, R. Travis, J. Virtamo, G. Andriole, E. Gelmann, W.C. Willett, and D.J. Hunter, A common 8q24 variant in prostate and breast cancer from a large nested case-control study. Cancer Res, 2007. 67(7): p. 2951-6.

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46. Zhai, R., M.N. Gong, W. Zhou, T.B. Thompson, P. Kraft, L. Su, and D.C. Christiani, Genotypes and haplotypes of the VEGF gene are associated with higher mortality and lower VEGF plasma levels in patients with ARDS. Thorax, 2007. 62(8): p. 718-22.

47. Yang, Y., E. Ruiz-Narvaez, P. Kraft, and H. Campos, Effect of apolipoprotein E genotype and saturated fat intake on plasma lipids and myocardial infarction in the Central Valley of Costa Rica. Hum Biol, 2007. 79(6): p. 637-47.

48. Baylin, A., E. Ruiz-Narvaez, P. Kraft, and H. Campos, alpha-Linolenic acid, Delta6-desaturase gene polymorphism, and the risk of nonfatal myocardial infarction. Am J Clin Nutr, 2007. 85(2): p. 554-60.

49. Hazra, A., K. Wu, P. Kraft, C.S. Fuchs, E.L. Giovannucci, and D.J. Hunter, Twenty-four non-synonymous polymorphisms in the one-carbon metabolic pathway and risk of colorectal adenoma in the Nurses' Health Study. Carcinogenesis, 2007. 28(7): p. 1510-9.

50. Hunter, D.J., P. Kraft, K.B. Jacobs, D.G. Cox, M. Yeager, S.E. Hankinson, S. Wacholder, Z. Wang, R. Welch, A. Hutchinson, J. Wang, K. Yu, N. Chatterjee, N. Orr, W.C. Willett, G.A. Colditz, R.G. Ziegler, C.D. Berg, S.S. Buys, C.A. McCarty, H.S. Feigelson, E.E. Calle, M.J. Thun, R.B. Hayes, M. Tucker, D.S. Gerhard, J.F. Fraumeni, Jr., R.N. Hoover, G. Thomas, and S.J. Chanock, A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer. Nat Genet, 2007. 39(7): p. 870-4.

51. Ogino, S., T. Kawasaki, G.J. Kirkner, P. Kraft, M. Loda, and C.S. Fuchs, Evaluation of markers for CpG island methylator phenotype (CIMP) in colorectal cancer by a large population-based sample. J Mol Diagn, 2007. 9(3): p. 305-14.

52. Zhai, R., W. Zhou, M.N. Gong, B.T. Thompson, L. Su, C. Yu, P. Kraft, and D.C. Christiani, Inhibitor kappaB-alpha haplotype GTC is associated with susceptibility to acute respiratory distress syndrome in Caucasians. Crit Care Med, 2007. 35(3): p. 893-8.

53. Yeager, M., N. Orr, R.B. Hayes, K.B. Jacobs, P. Kraft, S. Wacholder, M.J. Minichiello, P. Fearnhead, K. Yu, N. Chatterjee, Z. Wang, R. Welch, B.J. Staats, E.E. Calle, H.S. Feigelson, M.J. Thun, C. Rodriguez, D. Albanes, J. Virtamo, S. Weinstein, F.R. Schumacher, E. Giovannucci, W.C. Willett, G. Cancel-Tassin, O. Cussenot, A. Valeri, G.L. Andriole, E.P. Gelmann, M. Tucker, D.S. Gerhard, J.F. Fraumeni, Jr., R. Hoover, D.J. Hunter, S.J. Chanock, and G. Thomas, Genome-wide association study of prostate cancer identifies a second risk locus at 8q24. Nat Genet, 2007. 39(5): p. 645-9.

54. Setiawan, V.W., F.R. Schumacher, C.A. Haiman, D.O. Stram, D. Albanes, D. Altshuler, G. Berglund, J. Buring, E.E. Calle, F. Clavel-Chapelon, D.G. Cox, J.M. Gaziano, S.E. Hankinson, R.B. Hayes, B.E. Henderson, J. Hirsch, R. Hoover, D.J. Hunter, R. Kaaks, L.N. Kolonel, P. Kraft, J. Ma, L. Le Marchand, J. Linseisen, E. Lund, C. Navarro, K. Overvad, D. Palli, P.H. Peeters, M.C. Pike, E. Riboli, M.J. Stampfer, M.J. Thun, R. Travis, D. Trichopoulos, M. Yeager, R.G. Ziegler, H. Spencer Feigelson, and S.J. Chanock, CYP17 genetic variation and risk of breast and prostate cancer from the National Cancer Institute Breast and Prostate Cancer Cohort Consortium (BPC3). Cancer Epidemiol Biomarkers Prev, 2007. 16(11): p. 2237-46.

55. Kraft, P., Analyses of genome-wide association scans for additional outcomes. Epidemiology, 2007. 18(6): p. 838.

56. Kraft, P. and D.O. Stram, Re: the use of inferred haplotypes in downstream analysis. Am J Hum Genet, 2007. 81(4): p. 863-5; author reply 865-6.

57. Ruiz-Narvaez, E.A., P. Kraft, and H. Campos, Ala12 variant of the peroxisome proliferator-activated receptor-gamma gene (PPARG) is associated with higher polyunsaturated fat in adipose tissue and attenuates the protective effect of polyunsaturated fat intake on the risk of myocardial infarction. Am J Clin Nutr, 2007. 86(4): p. 1238-42.

58. Chen, Y.C., P. Kraft, P. Bretsky, S. Ketkar, D.J. Hunter, D. Albanes, D. Altshuler, G. Andriole, C.D. Berg, H. Boeing, N. Burtt, B. Bueno-de-Mesquita, H. Cann, F. Canzian, S. Chanock, A. Dunning, H.S. Feigelson, M. Freedman, J.M. Gaziano, E. Giovannucci, M.J. Sanchez, C.A. Haiman, G. Hallmans, R.B. Hayes, B.E. Henderson, J. Hirschhorn, R. Kaaks, T.J. Key, L.N. Kolonel, L. LeMarchand, J. Ma, K. Overvad, D. Palli, P. Pharaoh, M. Pike, E. Riboli, C. Rodriguez, V.W. Setiawan, M. Stampfer, D.O.

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Stram, G. Thomas, M.J. Thun, R.C. Travis, J. Virtamo, A. Trichopoulou, S. Wacholder, and S.J. Weinstein, Sequence variants of estrogen receptor beta and risk of prostate cancer in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium. Cancer Epidemiol Biomarkers Prev, 2007. 16(10): p. 1973-81.

59. Chen, Y.C., E. Giovannucci, P. Kraft, R. Lazarus, and D.J. Hunter, Association between Toll-like receptor gene cluster (TLR6, TLR1, and TLR10) and prostate cancer. Cancer Epidemiol Biomarkers Prev, 2007. 16(10): p. 1982-9.

60. Patel, A.V., I. Cheng, F. Canzian, L. Le Marchand, M.J. Thun, C.D. Berg, J. Buring, E.E. Calle, S. Chanock, F. Clavel-Chapelon, D.G. Cox, M. Dorronsoro, L. Dossus, C.A. Haiman, S.E. Hankinson, B.E. Henderson, R. Hoover, D.J. Hunter, R. Kaaks, L.N. Kolonel, P. Kraft, J. Linseisen, E. Lund, J. Manjer, C. McCarty, P.H. Peeters, M.C. Pike, M. Pollak, E. Riboli, D.O. Stram, A. Tjonneland, R.C. Travis, D. Trichopoulos, R. Tumino, M. Yeager, R.G. Ziegler, and H.S. Feigelson, IGF-1, IGFBP-1, and IGFBP-3 polymorphisms predict circulating IGF levels but not breast cancer risk: findings from the Breast and Prostate Cancer Cohort Consortium (BPC3). PLoS One, 2008. 3(7): p. e2578.

61. Tamimi, R.M., D. Cox, P. Kraft, G.A. Colditz, S.E. Hankinson, and D.J. Hunter, Breast cancer susceptibility loci and mammographic density. Breast Cancer Res, 2008. 10(4): p. R66.

62. Chen, Y.C., E. Giovannucci, P. Kraft, and D.J. Hunter, Association between genetic polymorphisms of macrophage scavenger receptor 1 gene and risk of prostate cancer in the health professionals follow-up study. Cancer Epidemiol Biomarkers Prev, 2008. 17(4): p. 1001-3.

63. Garcia-Closas, M., P. Hall, H. Nevanlinna, K. Pooley, J. Morrison, D.A. Richesson, S.E. Bojesen, B.G. Nordestgaard, C.K. Axelsson, J.I. Arias, R.L. Milne, G. Ribas, A. Gonzalez-Neira, J. Benitez, P. Zamora, H. Brauch, C. Justenhoven, U. Hamann, Y.D. Ko, T. Bruening, S. Haas, T. Dork, P. Schurmann, P. Hillemanns, N. Bogdanova, M. Bremer, J.H. Karstens, R. Fagerholm, K. Aaltonen, K. Aittomaki, K. von Smitten, C. Blomqvist, A. Mannermaa, M. Uusitupa, M. Eskelinen, M. Tengstrom, V.M. Kosma, V. Kataja, G. Chenevix-Trench, A.B. Spurdle, J. Beesley, X. Chen, P. Devilee, C.J. van Asperen, C.E. Jacobi, R.A. Tollenaar, P.E. Huijts, J.G. Klijn, J. Chang-Claude, S. Kropp, T. Slanger, D. Flesch-Janys, E. Mutschelknauss, R. Salazar, S. Wang-Gohrke, F. Couch, E.L. Goode, J.E. Olson, C. Vachon, Z.S. Fredericksen, G.G. Giles, L. Baglietto, G. Severi, J.L. Hopper, D.R. English, M.C. Southey, C.A. Haiman, B.E. Henderson, L.N. Kolonel, L. Le Marchand, D.O. Stram, D.J. Hunter, S.E. Hankinson, D.G. Cox, R. Tamimi, P. Kraft, M.E. Sherman, S.J. Chanock, J. Lissowska, L.A. Brinton, B. Peplonska, M.J. Hooning, H. Meijers-Heijboer, J.M. Collee, A. van den Ouweland, A.G. Uitterlinden, J. Liu, L.Y. Lin, L. Yuqing, K. Humphreys, K. Czene, A. Cox, S.P. Balasubramanian, S.S. Cross, M.W. Reed, F. Blows, K. Driver, A. Dunning, J. Tyrer, B.A. Ponder, S. Sangrajrang, P. Brennan, J. McKay, F. Odefrey, V. Gabrieau, A. Sigurdson, M. Doody, J.P. Struewing, B. Alexander, D.F. Easton and P.D. Pharoah, Heterogeneity of breast cancer associations with five susceptibility loci by clinical and pathological characteristics. PLoS Genet, 2008. 4(4): p. e1000054.

64. DiBello, J.R., P. Kraft, S.T. McGarvey, R. Goldberg, H. Campos, and A. Baylin, Comparison of 3 methods for identifying dietary patterns associated with risk of disease. Am J Epidemiol, 2008. 168(12): p. 1433-43.

65. Cox, D.G., P. Bretsky, P. Kraft, P. Pharoah, D. Albanes, D. Altshuler, P. Amiano, G. Berglund, H. Boeing, J. Buring, N. Burtt, E.E. Calle, F. Canzian, S. Chanock, F. Clavel-Chapelon, G.A. Colditz, H.S. Feigelson, C.A. Haiman, S.E. Hankinson, J. Hirschhorn, B.E. Henderson, R. Hoover, D.J. Hunter, R. Kaaks, L. Kolonel, L. LeMarchand, E. Lund, D. Palli, P.H. Peeters, M.C. Pike, E. Riboli, D.O. Stram, M. Thun, A. Tjonneland, R.C. Travis, D. Trichopoulos, and M. Yeager, Haplotypes of the estrogen receptor beta gene and breast cancer risk. Int J Cancer, 2008. 122(2): p. 387-92.

66. Loos, R.J., C.M. Lindgren, S. Li, E. Wheeler, J.H. Zhao, I. Prokopenko, M. Inouye, R.M. Freathy, A.P. Attwood, J.S. Beckmann, S.I. Berndt, K.B. Jacobs, S.J. Chanock, R.B. Hayes, S. Bergmann, A.J. Bennett, S.A. Bingham, M. Bochud, M. Brown, S. Cauchi, J.M. Connell, C. Cooper, G.D. Smith, I. Day, C. Dina, S. De, E.T. Dermitzakis, A.S. Doney, K.S. Elliott, P. Elliott, D.M. Evans, I. Sadaf Farooqi, P. Froguel, J. Ghori, C.J. Groves, R. Gwilliam, D. Hadley, A.S. Hall, A.T. Hattersley, J. Hebebrand, I.M.

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Heid, C. Lamina, C. Gieger, T. Illig, T. Meitinger, H.E. Wichmann, B. Herrera, A. Hinney, S.E. Hunt, M.R. Jarvelin, T. Johnson, J.D. Jolley, F. Karpe, A. Keniry, K.T. Khaw, R.N. Luben, M. Mangino, J. Marchini, W.L. McArdle, R. McGinnis, D. Meyre, P.B. Munroe, A.D. Morris, A.R. Ness, M.J. Neville, A.C. Nica, K.K. Ong, S. O'Rahilly, K.R. Owen, C.N. Palmer, K. Papadakis, S. Potter, A. Pouta, L. Qi, J.C. Randall, N.W. Rayner, S.M. Ring, M.S. Sandhu, A. Scherag, M.A. Sims, K. Song, N. Soranzo, E.K. Speliotes, H.E. Syddall, S.A. Teichmann, N.J. Timpson, J.H. Tobias, M. Uda, C.I. Vogel, C. Wallace, D.M. Waterworth, M.N. Weedon, C.J. Willer, Wraight, X. Yuan, E. Zeggini, J.N. Hirschhorn, D.P. Strachan, W.H. Ouwehand, M.J. Caulfield, N.J. Samani, T.M. Frayling, P. Vollenweider, G. Waeber, V. Mooser, P. Deloukas, M.I. McCarthy, N.J. Wareham, I. Barroso, P. Kraft, S.E. Hankinson, D.J. Hunter, F.B. Hu, H.N. Lyon, B.F. Voight, M. Ridderstrale, L. Groop, P. Scheet, S. Sanna, G.R. Abecasis, G. Albai, R. Nagaraja, D. Schlessinger, A.U. Jackson, J. Tuomilehto, F.S. Collins, M. Boehnke and K.L. Mohlke, Common variants near MC4R are associated with fat mass, weight and risk of obesity. Nat Genet, 2008. 40(6): p. 768-75.

67. Thomas, G., K.B. Jacobs, M. Yeager, P. Kraft, S. Wacholder, N. Orr, K. Yu, N. Chatterjee, R. Welch, A. Hutchinson, A. Crenshaw, G. Cancel-Tassin, B.J. Staats, Z. Wang, J. Gonzalez-Bosquet, J. Fang, X. Deng, S.I. Berndt, E.E. Calle, H.S. Feigelson, M.J. Thun, C. Rodriguez, D. Albanes, J. Virtamo, S. Weinstein, F.R. Schumacher, E. Giovannucci, W.C. Willett, O. Cussenot, A. Valeri, G.L. Andriole, E.D. Crawford, M. Tucker, D.S. Gerhard, J.F. Fraumeni, Jr., R. Hoover, R.B. Hayes, D.J. Hunter, and S.J. Chanock, Multiple loci identified in a genome-wide association study of prostate cancer. Nat Genet, 2008. 40(3): p. 310-5.

68. Chen, Y.C., E. Giovannucci, P. Kraft, and J.H. D, Sequence variants of elaC homolog 2 (Escherichia coli) (ELAC2) gene and susceptibility to prostate cancer in the Health Professionals Follow-Up Study. Carcinogenesis, 2008. 29(5): p. 999-1004.

69. Lettre, G., A.U. Jackson, C. Gieger, F.R. Schumacher, S.I. Berndt, S. Sanna, S. Eyheramendy, B.F. Voight, J.L. Butler, C. Guiducci, T. Illig, R. Hackett, I.M. Heid, K.B. Jacobs, V. Lyssenko, M. Uda, M. Boehnke, S.J. Chanock, L.C. Groop, F.B. Hu, B. Isomaa, P. Kraft, L. Peltonen, V. Salomaa, D. Schlessinger, D.J. Hunter, R.B. Hayes, G.R. Abecasis, H.E. Wichmann, K.L. Mohlke, and J.N. Hirschhorn, Identification of ten loci associated with height highlights new biological pathways in human growth. Nat Genet, 2008. 40(5): p. 584-91.

70. Han, J., P. Kraft, H. Nan, Q. Guo, C. Chen, A. Qureshi, S.E. Hankinson, F.B. Hu, D.L. Duffy, Z.Z. Zhao, N.G. Martin, G.W. Montgomery, N.K. Hayward, G. Thomas, R.N. Hoover, S. Chanock, and D.J. Hunter, A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation. PLoS Genet, 2008. 4(5): p. e1000074.

71. Qi, L., K. Kang, C. Zhang, R.M. van Dam, P. Kraft, D. Hunter, C.H. Lee, and F.B. Hu, Fat mass-and obesity-associated (FTO) gene variant is associated with obesity: longitudinal analyses in two cohort studies and functional test. Diabetes, 2008. 57(11): p. 3145-51.

72. Qi, L., P. Kraft, D.J. Hunter, and F.B. Hu, The common obesity variant near MC4R gene is associated with higher intakes of total energy and dietary fat, weight change and diabetes risk in women. Hum Mol Genet, 2008. 17(22): p. 3502-8.

73. Hazra, A., P. Kraft, J. Selhub, E.L. Giovannucci, G. Thomas, R.N. Hoover, S.J. Chanock, and D.J. Hunter, Common variants of FUT2 are associated with plasma vitamin B12 levels. Nat Genet, 2008. 40(10): p. 1160-2.

74. Gu, F., A.A. Qureshi, T. Niu, P. Kraft, Q. Guo, D.J. Hunter, and J. Han, Interleukin and interleukin receptor gene polymorphisms and susceptibility to melanoma. Melanoma Res, 2008. 18(5): p. 330-5.

75. Ahn, J., S.I. Berndt, S. Wacholder, P. Kraft, A.S. Kibel, M. Yeager, D. Albanes, E. Giovannucci, M.J. Stampfer, J. Virtamo, M.J. Thun, H.S. Feigelson, G. Cancel-Tassin, O. Cussenot, G. Thomas, D.J. Hunter, J.F. Fraumeni, Jr., R.N. Hoover, S.J. Chanock, and R.B. Hayes, Variation in KLK genes, prostate-specific antigen and risk of prostate cancer. Nat Genet, 2008. 40(9): p. 1032-4; author reply 1035-6.

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76. Caporaso, N.*, F. Gu*, N. Chatterjee, J. Sheng-Chih, K. Yu, M. Yeager, C. Chen, K. Jacobs, W. Wheeler, M.T. Landi, R.G. Ziegler, D.J. Hunter, S. Chanock, S. Hankinson, A.W. Bergen, and P. Kraft*, Genome-wide and candidate gene association study of cigarette smoking behaviors. PLoS One, 2009. 4(2): p. e4653.

77. Pezzotti, A., P. Kraft, S.E. Hankinson, D.J. Hunter, J. Buring, and D.G. Cox, The mitochondrial A10398G polymorphism, interaction with alcohol consumption, and breast cancer risk. PLoS One, 2009. 4(4): p. e5356.

78. Lindstrom, S., Y.C. Yen, D. Spiegelman, and P. Kraft, The impact of gene-environment dependence and misclassification in genetic association studies incorporating gene-environment interactions. Hum Hered, 2009. 68(3): p. 171-81.

79. Cornelis, M.C., L. Qi, P. Kraft, and F.B. Hu, TCF7L2, dietary carbohydrate, and risk of type 2 diabetes in US women. Am J Clin Nutr, 2009. 89(4): p. 1256-62.

80. Kraft, P., S. Wacholder, M.C. Cornelis, F.B. Hu, R.B. Hayes, G. Thomas, R. Hoover, D.J. Hunter, and S. Chanock, Beyond odds ratios--communicating disease risk based on genetic profiles. Nat Rev Genet, 2009. 10(4): p. 264-9.

81. De Vivo, I., J. Prescott, J.Y. Wong, P. Kraft, S.E. Hankinson, and D.J. Hunter, A prospective study of relative telomere length and postmenopausal breast cancer risk. Cancer Epidemiol Biomarkers Prev, 2009. 18(4): p. 1152-6.

82. Cornelis, M.C., L. Qi, C. Zhang, P. Kraft, J. Manson, T. Cai, D.J. Hunter, and F.B. Hu, Joint effects of common genetic variants on the risk for type 2 diabetes in U.S. men and women of European ancestry. Ann Intern Med, 2009. 150(8): p. 541-50.

83. Nan, H., P. Kraft, D.J. Hunter, and J. Han, Genetic variants in pigmentation genes, pigmentary phenotypes, and risk of skin cancer in Caucasians. Int J Cancer, 2009. 125(4): p. 909-17.

84. Lynch, S.M., A. Vrieling, J.H. Lubin, P. Kraft, J.B. Mendelsohn, P. Hartge, F. Canzian, E. Steplowski, A.A. Arslan, M. Gross, K. Helzlsouer, E.J. Jacobs, A. LaCroix, G. Petersen, W. Zheng, D. Albanes, L. Amundadottir, S.A. Bingham, P. Boffetta, M.C. Boutron-Ruault, S.J. Chanock, S. Clipp, R.N. Hoover, K. Jacobs, K.C. Johnson, C. Kooperberg, J. Luo, C. Messina, D. Palli, A.V. Patel, E. Riboli, X.O. Shu, L. Rodriguez Suarez, G. Thomas, A. Tjonneland, G.S. Tobias, E. Tong, D. Trichopoulos, J. Virtamo, W. Ye, K. Yu, A. Zeleniuch-Jacquette, H.B. Bueno-de-Mesquita, and R.Z. Stolzenberg-Solomon, Cigarette smoking and pancreatic cancer: a pooled analysis from the pancreatic cancer cohort consortium. Am J Epidemiol, 2009. 170(4): p. 403-13.

85. Yu, K., Q. Li, A.W. Bergen, R.M. Pfeiffer, P.S. Rosenberg, N. Caporaso, P. Kraft, and N. Chatterjee, Pathway analysis by adaptive combination of P-values. Genet Epidemiol, 2009. 33(8): p. 700-9.

86. Monsees, G.M., R.M. Tamimi, and P. Kraft, Genome-wide association scans for secondary traits using case-control samples. Genet Epidemiol, 2009. 33(8): p. 717-28.

87. Hazra, A., P. Kraft, R. Lazarus, C. Chen, S.J. Chanock, P. Jacques, J. Selhub, and D.J. Hunter, Genome-wide significant predictors of metabolites in the one-carbon metabolism pathway. Hum Mol Genet, 2009. 18(23): p. 4677-87.

88. Kong A, Steinthorsdottir V, Masson G, Thorleifsson G, Sulem P, Besenbacher S, Jonasdottir A, Sigurdsson A, Kristinsson KT, Jonasdottir A, Frigge ML, Gylfason A, Olason PI, Gudjonsson SA, Sverrisson S, Stacey SN, Sigurgeirsson B, Benediktsdottir KR, Sigurdsson H, Jonsson T, Benediktsson R, Olafsson JH, Johannsson OT, Hreidarsson AB, Sigurdsson G; DIAGRAM Consortium, Ferguson-Smith AC, Gudbjartsson DF, Thorsteinsdottir U, Stefansson K. Parental origin of sequence variants associated with complex diseases. Nature. 2009 Dec 17;462(7275):868-74.

89. Willer, C.J., E.K. Speliotes, R.J. Loos, S. Li, C.M. Lindgren, I.M. Heid, S.I. Berndt, A.L. Elliott, A.U. Jackson, C. Lamina, G. Lettre, N. Lim, H.N. Lyon, S.A. McCarroll, K. Papadakis, L. Qi, J.C. Randall, R.M. Roccasecca, S. Sanna, P. Scheet, M.N. Weedon, E. Wheeler, J.H. Zhao, L.C. Jacobs, I. Prokopenko, N. Soranzo, T. Tanaka, N.J. Timpson, P. Almgren, A. Bennett, R.N. Bergman, S.A. Bingham, L.L. Bonnycastle, M. Brown, N.P. Burtt, P. Chines, L. Coin, F.S. Collins, J.M. Connell, C. Cooper, G.D. Smith, E.M. Dennison, P. Deodhar, P. Elliott, M.R. Erdos, K. Estrada, D.M. Evans, L.

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Gianniny, C. Gieger, C.J. Gillson, C. Guiducci, R. Hackett, D. Hadley, A.S. Hall, A.S. Havulinna, J. Hebebrand, A. Hofman, B. Isomaa, K.B. Jacobs, T. Johnson, P. Jousilahti, Z. Jovanovic, K.T. Khaw, P. Kraft, M. Kuokkanen, J. Kuusisto, J. Laitinen, E.G. Lakatta, J. Luan, R.N. Luben, M. Mangino, W.L. McArdle, T. Meitinger, A. Mulas, P.B. Munroe, N. Narisu, A.R. Ness, K. Northstone, S. O'Rahilly, C. Purmann, M.G. Rees, M. Ridderstrale, S.M. Ring, F. Rivadeneira, A. Ruokonen, M.S. Sandhu, J. Saramies, L.J. Scott, A. Scuteri, K. Silander, M.A. Sims, K. Song, J. Stephens, S. Stevens, H.M. Stringham, Y.C. Tung, T.T. Valle, C.M. Van Duijn, K.S. Vimaleswaran, P. Vollenweider, G. Waeber, C. Wallace, R.M. Watanabe, D.M. Waterworth, N. Watkins, J.C. Witteman, E. Zeggini, G. Zhai, M.C. Zillikens, D. Altshuler, M.J. Caulfield, S.J. Chanock, I.S. Farooqi, L. Ferrucci, J.M. Guralnik, A.T. Hattersley, F.B. Hu, M.R. Jarvelin, M. Laakso, V. Mooser, K.K. Ong, W.H. Ouwehand, V. Salomaa, N.J. Samani, T.D. Spector, T. Tuomi, J. Tuomilehto, M. Uda, A.G. Uitterlinden, N.J. Wareham, P. Deloukas, T.M. Frayling, L.C. Groop, R.B. Hayes, D.J. Hunter, K.L. Mohlke, L. Peltonen, D. Schlessinger, D.P. Strachan, H.E. Wichmann, M.I. McCarthy, M. Boehnke, I. Barroso, G.R. Abecasis and J.N. Hirschhorn, Six new loci associated with body mass index highlight a neuronal influence on body weight regulation. Nat Genet, 2009. 41(1): p. 25-34.

90. Birmann, B.M., R.M. Tamimi, E. Giovannucci, B. Rosner, D.J. Hunter, P. Kraft, C. Mitsiades, K.C. Anderson, and G.A. Colditz, Insulin-like growth factor-1- and interleukin-6-related gene variation and risk of multiple myeloma. Cancer Epidemiol Biomarkers Prev, 2009. 18(1): p. 282-8.

91. McKay, J.D., M.L. McCullough, R.G. Ziegler, P. Kraft, B.S. Saltzman, E. Riboli, A. Barricarte, C.D. Berg, G. Bergland, S. Bingham, M. Brustad, H.B. Bueno-de-Mesquita, L. Burdette, J. Buring, E.E. Calle, S.J. Chanock, F. Clavel-Chapelon, D.G. Cox, L. Dossus, H.S. Feigelson, C.A. Haiman, S.E. Hankinson, R.N. Hoover, D.J. Hunter, A. Husing, R. Kaaks, L.N. Kolonel, L. Le Marchand, J. Linseisen, C.A. McCarty, K. Overvad, S. Panico, M.P. Purdue, D.O. Stram, V.L. Stevens, D. Trichopoulos, W.C. Willett, J. Yuenger, and M.J. Thun, Vitamin D receptor polymorphisms and breast cancer risk: results from the National Cancer Institute Breast and Prostate Cancer Cohort Consortium. Cancer Epidemiol Biomarkers Prev, 2009. 18(1): p. 297-305.

92. Gu, F., A.A. Qureshi, P. Kraft, Q. Guo, D.J. Hunter, and J. Han, Polymorphisms in genes involved in DNA repair, cell growth, oxidative stress and inflammatory response, and melanoma risk. Br J Dermatol, 2009. 161(1): p. 209-12.

93. He, C., P. Kraft, C. Chen, J.E. Buring, G. Pare, S.E. Hankinson, S.J. Chanock, P.M. Ridker, D.J. Hunter, and D.I. Chasman, Genome-wide association studies identify loci associated with age at menarche and age at natural menopause. Nat Genet, 2009. 41(6): p. 724-8.

94. Stark, J.R., F. Wiklund, H. Gronberg, F. Schumacher, J.A. Sinnott, M.J. Stampfer, L.A. Mucci, and P. Kraft, Toll-like receptor signaling pathway variants and prostate cancer mortality. Cancer Epidemiol Biomarkers Prev, 2009. 18(6): p. 1859-63.

95. Stark, J.R., H. Li, P. Kraft, T. Kurth, E.L. Giovannucci, M.J. Stampfer, J. Ma, and L.A. Mucci, Circulating prediagnostic interleukin-6 and C-reactive protein and prostate cancer incidence and mortality. Int J Cancer, 2009. 124(11): p. 2683-9.

96. Truong, H., J.R. DiBello, E. Ruiz-Narvaez, P. Kraft, H. Campos, and A. Baylin, Does genetic variation in the Delta6-desaturase promoter modify the association between alpha-linolenic acid and the prevalence of metabolic syndrome? Am J Clin Nutr, 2009. 89(3): p. 920-5.

97. Chang, E.T., B.M. Birmann, J.L. Kasperzyk, D.V. Conti, P. Kraft, R.F. Ambinder, T. Zheng, and N.E. Mueller, Polymorphic variation in NFKB1 and other aspirin-related genes and risk of Hodgkin lymphoma. Cancer Epidemiol Biomarkers Prev, 2009. 18(3): p. 976-86.

98. Wolpin, B.M., A.T. Chan, P. Hartge, S.J. Chanock, P. Kraft, D.J. Hunter, E.L. Giovannucci, and C.S. Fuchs, ABO blood group and the risk of pancreatic cancer. J Natl Cancer Inst, 2009. 101(6): p. 424-31.

99. Ogino, S., K. Nosho, G.J. Kirkner, K. Shima, N. Irahara, S. Kure, A.T. Chan, J.A. Engelman, P. Kraft, L.C. Cantley, E.L. Giovannucci, and C.S. Fuchs, PIK3CA mutation is associated with poor prognosis among patients with curatively resected colon cancer. J Clin Oncol, 2009. 27(9): p. 1477-84.

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100. Ahmed, S., G. Thomas, M. Ghoussaini, C.S. Healey, M.K. Humphreys, R. Platte, J. Morrison, M. Maranian, K.A. Pooley, R. Luben, D. Eccles, D.G. Evans, O. Fletcher, N. Johnson, I. dos Santos Silva, J. Peto, M.R. Stratton, N. Rahman, K. Jacobs, R. Prentice, G.L. Anderson, A. Rajkovic, J.D. Curb, R.G. Ziegler, C.D. Berg, S.S. Buys, C.A. McCarty, H.S. Feigelson, E.E. Calle, M.J. Thun, W.R. Diver, S. Bojesen, B.G. Nordestgaard, H. Flyger, T. Dork, P. Schurmann, P. Hillemanns, J.H. Karstens, N.V. Bogdanova, N.N. Antonenkova, I.V. Zalutsky, M. Bermisheva, S. Fedorova, E. Khusnutdinova, D. Kang, K.Y. Yoo, D.Y. Noh, S.H. Ahn, P. Devilee, C.J. van Asperen, R.A. Tollenaar, C. Seynaeve, M. Garcia-Closas, J. Lissowska, L. Brinton, B. Peplonska, H. Nevanlinna, T. Heikkinen, K. Aittomaki, C. Blomqvist, J.L. Hopper, M.C. Southey, L. Smith, A.B. Spurdle, M.K. Schmidt, A. Broeks, R.R. van Hien, S. Cornelissen, R.L. Milne, G. Ribas, A. Gonzalez-Neira, J. Benitez, R.K. Schmutzler, B. Burwinkel, C.R. Bartram, A. Meindl, H. Brauch, C. Justenhoven, U. Hamann, J. Chang-Claude, R. Hein, S. Wang-Gohrke, A. Lindblom, S. Margolin, A. Mannermaa, V.M. Kosma, V. Kataja, J.E. Olson, X. Wang, Z. Fredericksen, G.G. Giles, G. Severi, L. Baglietto, D.R. English, S.E. Hankinson, D.G. Cox, P. Kraft, L.J. Vatten, K. Hveem, M. Kumle, A. Sigurdson, M. Doody, P. Bhatti, B.H. Alexander, M.J. Hooning, A.M. van den Ouweland, R.A. Oldenburg, M. Schutte, P. Hall, K. Czene, J. Liu, Y. Li, A. Cox, G. Elliott, I. Brock, M.W. Reed, C.Y. Shen, J.C. Yu, G.C. Hsu, S.T. Chen, H. Anton-Culver, A. Ziogas, I.L. Andrulis, J.A. Knight, J. Beesley, E.L. Goode, F. Couch, G. Chenevix-Trench, R.N. Hoover, B.A. Ponder, D.J. Hunter, P.D. Pharoah, A.M. Dunning, S.J. Chanock and D.F. Easton, Newly discovered breast cancer susceptibility loci on 3p24 and 17q23.2. Nat Genet, 2009. 41(5): p. 585-90.

101. Thomas, G., K.B. Jacobs, P. Kraft, M. Yeager, S. Wacholder, D.G. Cox, S.E. Hankinson, A. Hutchinson, Z. Wang, K. Yu, N. Chatterjee, M. Garcia-Closas, J. Gonzalez-Bosquet, L. Prokunina-Olsson, N. Orr, W.C. Willett, G.A. Colditz, R.G. Ziegler, C.D. Berg, S.S. Buys, C.A. McCarty, H.S. Feigelson, E.E. Calle, M.J. Thun, R. Diver, R. Prentice, R. Jackson, C. Kooperberg, R. Chlebowski, J. Lissowska, B. Peplonska, L.A. Brinton, A. Sigurdson, M. Doody, P. Bhatti, B.H. Alexander, J. Buring, I.M. Lee, L.J. Vatten, K. Hveem, M. Kumle, R.B. Hayes, M. Tucker, D.S. Gerhard, J.F. Fraumeni, Jr., R.N. Hoover, S.J. Chanock, and D.J. Hunter, A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1). Nat Genet, 2009. 41(5): p. 579-84.

102. Gaudet, M.M., R.L. Milne, A. Cox, N.J. Camp, E.L. Goode, M.K. Humphreys, A.M. Dunning, J. Morrison, G.G. Giles, G. Severi, L. Baglietto, D.R. English, F.J. Couch, J.E. Olson, X. Wang, J. Chang-Claude, D. Flesch-Janys, S. Abbas, R. Salazar, A. Mannermaa, V. Kataja, V.M. Kosma, A. Lindblom, S. Margolin, T. Heikkinen, K. Kampjarvi, K. Aaltonen, H. Nevanlinna, N. Bogdanova, I. Coinac, P. Schurmann, T. Dork, C.R. Bartram, R.K. Schmutzler, S. Tchatchou, B. Burwinkel, H. Brauch, D. Torres, U. Hamann, C. Justenhoven, G. Ribas, J.I. Arias, J. Benitez, S.E. Bojesen, B.G. Nordestgaard, H.L. Flyger, J. Peto, O. Fletcher, N. Johnson, I. Dos Santos Silva, P.A. Fasching, M.W. Beckmann, R. A.B. Ekici, A. Broeks, M.K. Schmidt, F.E. van Leeuwen, L.J. Van't Veer, M.C. Southey, J.L. Hopper, C. Apicella, C.A. Haiman, B.E. Henderson, L. Le Marchand, L.N. Kolonel, V. Kristensen, G. Grenaker Alnaes, D.J. Hunter, P. Kraft, D.G. Cox, S.E. Hankinson, C. Seynaeve, M.P. Vreeswijk, R.A. Tollenaar, P. Devilee, S. Chanock, J. Lissowska, L. Brinton, B. Peplonska, K. Czene, P. Hall, Y. Li, J. Liu, S. Balasubramanian, S. Rafii, M.W. Reed, K.A. Pooley, D. Conroy, C. Baynes, D. Kang, K.Y. Yoo, D.Y. Noh, S.H. Ahn, C.Y. Shen, H.C. Wang, J.C. Yu, P.E. Wu, H. Anton-Culver, A. Ziogoas, K. Egan, P. Newcomb, L. Titus-Ernstoff, A. Trentham Dietz, A.J. Sigurdson, B.H. Alexander, P. Bhatti, K. Allen-Brady, L.A. Cannon-Albright, J. Wong, G. Chenevix-Trench, A.B. Spurdle, J. Beesley, P.D. Pharoah, D.F. Easton and M. Garcia-Closas, Five polymorphisms and breast cancer risk: results from the Breast Cancer Association Consortium. Cancer Epidemiol Biomarkers Prev, 2009. 18(5): p. 1610-6.

103. Lou, H., M. Yeager, H. Li, J.G. Bosquet, R.B. Hayes, N. Orr, K. Yu, A. Hutchinson, K.B. Jacobs, P. Kraft, S. Wacholder, N. Chatterjee, H.S. Feigelson, M.J. Thun, W.R. Diver, D. Albanes, J. Virtamo, S. Weinstein, J. Ma, J.M. Gaziano, M. Stampfer, F.R. Schumacher, E. Giovannucci, G. Cancel-Tassin, O. Cussenot, A. Valeri, G.L. Andriole, E.D. Crawford, S.K. Anderson, M. Tucker, R.N. Hoover, J.F. Fraumeni, Jr., G. Thomas, D.J. Hunter, M. Dean, and S.J. Chanock, Fine mapping and functional

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analysis of a common variant in MSMB on chromosome 10q11.2 associated with prostate cancer susceptibility. Proc Natl Acad Sci U S A, 2009. 106(19): p. 7933-8.

104. Jacobs, K.B., M. Yeager, S. Wacholder, D. Craig, P. Kraft, D.J. Hunter, J. Paschal, T.A. Manolio, M. Tucker, R.N. Hoover, G.D. Thomas, S.J. Chanock, and N. Chatterjee, A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies. Nat Genet, 2009. 41(11): p. 1253-7.

105. DiBello, J.R., S.T. McGarvey, P. Kraft, R. Goldberg, H. Campos, C. Quested, T.S. Laumoli, and A. Baylin, Dietary patterns are associated with metabolic syndrome in adult Samoans. J Nutr, 2009. 139(10): p. 1933-43.

106. Yeager, M., N. Chatterjee, J. Ciampa, K.B. Jacobs, J. Gonzalez-Bosquet, R.B. Hayes, P. Kraft, S. Wacholder, N. Orr, S. Berndt, K. Yu, A. Hutchinson, Z. Wang, L. Amundadottir, H.S. Feigelson, M.J. Thun, W.R. Diver, D. Albanes, J. Virtamo, S. Weinstein, F.R. Schumacher, G. Cancel-Tassin, O. Cussenot, A. Valeri, G.L. Andriole, E.D. Crawford, C.A. Haiman, B. Henderson, L. Kolonel, L. Le Marchand, A. Siddiq, E. Riboli, T.J. Key, R. Kaaks, W. Isaacs, S. Isaacs, K.E. Wiley, H. Gronberg, F. Wiklund, P. Stattin, J. Xu, S.L. Zheng, J. Sun, L.J. Vatten, K. Hveem, M. Kumle, M. Tucker, D.S. Gerhard, R.N. Hoover, J.F. Fraumeni, Jr., D.J. Hunter, G. Thomas, and S.J. Chanock, Identification of a new prostate cancer susceptibility locus on chromosome 8q24. Nat Genet, 2009. 41(10): p. 1055-7.

107. Travis, R.C., F. Schumacher, J.N. Hirschhorn, P. Kraft, N.E. Allen, D. Albanes, G. Berglund, S.I. Berndt, H. Boeing, H.B. Bueno-de-Mesquita, E.E. Calle, S. Chanock, A.M. Dunning, R. Hayes, H.S. Feigelson, J.M. Gaziano, E. Giovannucci, C.A. Haiman, B.E. Henderson, R. Kaaks, L.N. Kolonel, J. Ma, L. Rodriguez, E. Riboli, M. Stampfer, D.O. Stram, M.J. Thun, A. Tjonneland, D. Trichopoulos, P. Vineis, J. Virtamo, L. Le Marchand, and D.J. Hunter, CYP19A1 genetic variation in relation to prostate cancer risk and circulating sex hormone concentrations in men from the Breast and Prostate Cancer Cohort Consortium. Cancer Epidemiol Biomarkers Prev, 2009. 18(10): p. 2734-44.

108. Xu, J., J. Sun, A.K. Kader, S. Lindstrom, F. Wiklund, F.C. Hsu, J.E. Johansson, S.L. Zheng, G. Thomas, R.B. Hayes, P. Kraft, D.J. Hunter, S.J. Chanock, W.B. Isaacs, and H. Gronberg, Estimation of absolute risk for prostate cancer using genetic markers and family history. Prostate, 2009. 69(14): p. 1565-72.

109. Ahn, J., F.R. Schumacher, S.I. Berndt, R. Pfeiffer, D. Albanes, G.L. Andriole, E. Ardanaz, H. Boeing, B. Bueno-de-Mesquita, S.J. Chanock, F. Clavel-Chapelon, W.R. Diver, H.S. Feigelson, J.M. Gaziano, E. Giovannucci, C.A. Haiman, B.E. Henderson, R.N. Hoover, L.N. Kolonel, P. Kraft, J. Ma, L. Le Marchand, K. Overvad, D. Palli, P. Stattin, M. Stampfer, D.O. Stram, G. Thomas, M.J. Thun, R.C. Travis, D. Trichopoulos, J. Virtamo, S.J. Weinstein, M. Yeager, R. Kaaks, D.J. Hunter, and R.B. Hayes, Quantitative trait loci predicting circulating sex steroid hormones in men from the NCI-Breast and Prostate Cancer Cohort Consortium (BPC3). Hum Mol Genet, 2009. 18(19): p. 3749-57.

110. Chen, J., H. Zheng, M.L. Wilson, and P. Kraft, Testing Hardy-Weinberg equilibrium using mother-child case-control samples. Genet Epidemiol, 2009. 33(6): p. 539-48.

111. Nan, H., P. Kraft, A.A. Qureshi, Q. Guo, C. Chen, S.E. Hankinson, F.B. Hu, G. Thomas, R.N. Hoover, S. Chanock, D.J. Hunter, and J. Han, Genome-wide association study of tanning phenotype in a population of European ancestry. J Invest Dermatol, 2009. 129(9): p. 2250-7.

112. Kraft P., L*. Amundadottir, L.*, R.Z. Stolzenberg-Solomon, C.S. Fuchs, G.M. Petersen, A.A. Arslan, H.B. Bueno-de-Mesquita, M. Gross, K. Helzlsouer, E.J. Jacobs, A. LaCroix, W. Zheng, D. Albanes, W. Bamlet, C.D. Berg, F. Berrino, S. Bingham, J.E. Buring, P.M. Bracci, F. Canzian, F. Clavel-Chapelon, S. Clipp, M. Cotterchio, M. de Andrade, E.J. Duell, J.W. Fox, Jr., S. Gallinger, J.M. Gaziano, E.L. Giovannucci, M. Goggins, C.A. Gonzalez, G. Hallmans, S.E. Hankinson, M. Hassan, E.A. Holly, D.J. Hunter, A. Hutchinson, R. Jackson, K.B. Jacobs, M. Jenab, R. Kaaks, A.P. Klein, C. Kooperberg, R.C. Kurtz, D. Li, S.M. Lynch, M. Mandelson, R.R. McWilliams, J.B. Mendelsohn, D.S. Michaud, S.H. Olson, K. Overvad, A.V. Patel, P.H. Peeters, A. Rajkovic, E. Riboli, H.A. Risch, X.O. Shu, G. Thomas, G.S. Tobias, D. Trichopoulos, S.K. Van Den Eeden, J. Virtamo, J. Wactawski-Wende, B.M. Wolpin, H. Yu, K. Yu, A. Zeleniuch-Jacquotte, S.J. Chanock, P. Hartge, and R.N. Hoover, Genome-wide

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association study identifies variants in the ABO locus associated with susceptibility to pancreatic cancer. Nat Genet, 2009. 41(9): p. 986-90.

113. Loomis, S.J., L.M. Olson, L.R. Pasquale, J. Wiggs, D. Mirel, A. Crenshaw, M. Parkin, B. Rahhal, S. Tetreault, P. Kraft, S.S. Tworoger, J.L. Haines, and J.H. Kang, Feasibility of High-Throughput Genome-Wide Genotyping using DNA from Stored Buccal Cell Samples. Biomark Insights, 2010. 5: p. 49-55.

114. Aschard, H., D.B. Hancock, S.J. London, and P. Kraft, Genome-wide meta-analysis of joint tests for genetic and gene-environment interaction effects. Hum Hered, 2010. 70(4): p. 292-300.

115. He, M., M.C. Cornelis, P. Kraft, R.M. van Dam, Q. Sun, C.C. Laurie, D.B. Mirel, D.I. Chasman, P.M. Ridker, D.J. Hunter, F.B. Hu, and L. Qi, Genome-wide association study identifies variants at the IL18-BCO2 locus associated with interleukin-18 levels. Arterioscler Thromb Vasc Biol, 2010. 30(4): p. 885-90.

116. Azzato, E.M., P.D. Pharoah, P. Harrington, D.F. Easton, D. Greenberg, N.E. Caporaso, S.J. Chanock, R.N. Hoover, G. Thomas, D.J. Hunter, and P. Kraft, A genome-wide association study of prognosis in breast cancer. Cancer Epidemiol Biomarkers Prev, 2010. 19(4): p. 1140-3.

117. Derti, A., C. Cenik, P. Kraft, and F.P. Roth, Absence of evidence for MHC-dependent mate selection within HapMap populations. PLoS Genet, 2010. 6(4): p. e1000925.

118. Michaud, D.S., A. Vrieling, L. Jiao, J.B. Mendelsohn, E. Steplowski, S.M. Lynch, J. Wactawski-Wende, A.A. Arslan, H. Bas Bueno-de-Mesquita, C.S. Fuchs, M. Gross, K. Helzlsouer, E.J. Jacobs, A. Lacroix, G. Petersen, W. Zheng, N. Allen, L. Ammundadottir, M.M. Bergmann, P. Boffetta, J.E. Buring, F. Canzian, S.J. Chanock, F. Clavel-Chapelon, S. Clipp, M.S. Freiberg, J. Michael Gaziano, E.L. Giovannucci, S. Hankinson, P. Hartge, R.N. Hoover, F. Allan Hubbell, D.J. Hunter, A. Hutchinson, K. Jacobs, C. Kooperberg, P. Kraft, J. Manjer, C. Navarro, P.H. Peeters, X.O. Shu, V. Stevens, G. Thomas, A. Tjonneland, G.S. Tobias, D. Trichopoulos, R. Tumino, P. Vineis, J. Virtamo, R. Wallace, B.M. Wolpin, K. Yu, A. Zeleniuch-Jacquotte, and R.Z. Stolzenberg-Solomon, Alcohol intake and pancreatic cancer: a pooled analysis from the pancreatic cancer cohort consortium (PanScan). Cancer Causes Control, 2010. 21(8): p. 1213-25.

119. Saccone, N.L., R.C. Culverhouse, T.H. Schwantes-An, D.S. Cannon, X. Chen, S. Cichon, I. Giegling, S. Han, Y. Han, K. Keskitalo-Vuokko, X. Kong, M.T. Landi, J.Z. Ma, S.E. Short, S.H. Stephens, V.L. Stevens, L. Sun, Y. Wang, A.S. Wenzlaff, S.H. Aggen, N. Breslau, P. Broderick, N. Chatterjee, J. Chen, A.C. Heath, M. Heliovaara, N.R. Hoft, D.J. Hunter, M.K. Jensen, N.G. Martin, G.W. Montgomery, T. Niu, T.J. Payne, L. Peltonen, M.L. Pergadia, J.P. Rice, R. Sherva, M.R. Spitz, J. Sun, J.C. Wang, R.B. Weiss, W. Wheeler, S.H. Witt, B.Z. Yang, N.E. Caporaso, M.A. Ehringer, T. Eisen, S.M. Gapstur, J. Gelernter, R. Houlston, J. Kaprio, K.S. Kendler, P. Kraft, M.F. Leppert, M.D. Li, P.A. Madden, M.M. Nothen, S. Pillai, M. Rietschel, D. Rujescu, A. Schwartz, C.I. Amos, and L.J. Bierut, Multiple independent loci at chromosome 15q25.1 affect smoking quantity: a meta-analysis and comparison with lung cancer and COPD. PLoS Genet, 2010. 6(8).

120. Schumacher, F.R., I. Cheng, M.L. Freedman, L. Mucci, N.E. Allen, M.N. Pollak, R.B. Hayes, D.O. Stram, F. Canzian, B.E. Henderson, D.J. Hunter, J. Virtamo, J. Manjer, J.M. Gaziano, L.N. Kolonel, A. Tjonneland, D. Albanes, E.E. Calle, E. Giovannucci, E.D. Crawford, C.A. Haiman, P. Kraft, W.C. Willett, M.J. Thun, L. Le Marchand, R. Kaaks, H.S. Feigelson, H.B. Bueno-de-Mesquita, D. Palli, E. Riboli, E. Lund, P. Amiano, G. Andriole, A.M. Dunning, D. Trichopoulos, M.J. Stampfer, T.J. Key, and J. Ma, A comprehensive analysis of common IGF1, IGFBP1 and IGFBP3 genetic variation with prospective IGF-I and IGFBP-3 blood levels and prostate cancer risk among Caucasians. Hum Mol Genet, 2010. 19(15): p. 3089-101.

121. Wolpin, B.M., P. Kraft, M. Xu, E. Steplowski, M.L. Olsson, A.A. Arslan, H.B. Bueno-de-Mesquita, M. Gross, K. Helzlsouer, E.J. Jacobs, A. LaCroix, G. Petersen, R.Z. Stolzenberg-Solomon, W. Zheng, D. Albanes, N.E. Allen, L. Amundadottir, M.A. Austin, M.C. Boutron-Ruault, J.E. Buring, F. Canzian, S.J. Chanock, J.M. Gaziano, E.L. Giovannucci, G. Hallmans, S.E. Hankinson, R.N. Hoover, D.J. Hunter, A. Hutchinson, K.B. Jacobs, C. Kooperberg, J.B. Mendelsohn, D.S. Michaud, K. Overvad, A.V. Patel, M.J.

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Sanchez, L. Sansbury, X.O. Shu, N. Slimani, G.S. Tobias, D. Trichopoulos, P. Vineis, K. Visvanathan, J. Virtamo, J. Wactawski-Wende, J. Watters, K. Yu, A. Zeleniuch-Jacquotte, P. Hartge, and C.S. Fuchs, Variant ABO blood group alleles, secretor status, and risk of pancreatic cancer: results from the pancreatic cancer cohort consortium. Cancer Epidemiol Biomarkers Prev, 2010. 19(12): p. 3140-9.

122. Elks, C.E., J.R. Perry, P. Sulem, D.I. Chasman, N. Franceschini, C. He, K.L. Lunetta, J.A. Visser, E.M. Byrne, D.L. Cousminer, D.F. Gudbjartsson, T. Esko, B. Feenstra, J.J. Hottenga, D.L. Koller, Z. Kutalik, P. Lin, M. Mangino, M. Marongiu, P.F. McArdle, A.V. Smith, L. Stolk, S.H. van Wingerden, J.H. Zhao, E. Albrecht, T. Corre, E. Ingelsson, C. Hayward, P.K. Magnusson, E.N. Smith, S. Ulivi, N.M. Warrington, L. Zgaga, H. Alavere, N. Amin, T. Aspelund, S. Bandinelli, I. Barroso, G.S. Berenson, S. Bergmann, H. Blackburn, E. Boerwinkle, J.E. Buring, F. Busonero, H. Campbell, S.J. Chanock, W. Chen, M.C. Cornelis, D. Couper, A.D. Coviello, P. d'Adamo, U. de Faire, E.J. de Geus, P. Deloukas, A. Doring, G.D. Smith, D.F. Easton, G. Eiriksdottir, V. Emilsson, J. Eriksson, L. Ferrucci, A.R. Folsom, T. Foroud, M. Garcia, P. Gasparini, F. Geller, C. Gieger, V. Gudnason, P. Hall, S.E. Hankinson, L. Ferreli, A.C. Heath, D.G. Hernandez, A. Hofman, F.B. Hu, T. Illig, M.R. Jarvelin, A.D. Johnson, D. Karasik, K.T. Khaw, D.P. Kiel, T.O. Kilpelainen, I. Kolcic, P. Kraft, L.J. Launer, J.S. Laven, S. Li, J. Liu, D. Levy, N.G. Martin, W.L. McArdle, M. Melbye, V. Mooser, J.C. Murray, S.S. Murray, M.A. Nalls, P. Navarro, M. Nelis, A.R. Ness, K. Northstone, B.A. Oostra, M. Peacock, L.J. Palmer, A. Palotie, G. Pare, A.N. Parker, N.L. Pedersen, L. Peltonen, C.E. Pennell, P. Pharoah, O. Polasek, A.S. Plump, A. Pouta, E. Porcu, T. Rafnar, J.P. Rice, S.M. Ring, F. Rivadeneira, I. Rudan, C. Sala, V. Salomaa, S. Sanna, D. Schlessinger, N.J. Schork, A. Scuteri, A.V. Segre, A.R. Shuldiner, N. Soranzo, U. Sovio, S.R. Srinivasan, D.P. Strachan, M.L. Tammesoo, E. Tikkanen, D. Toniolo, K. Tsui, L. Tryggvadottir, J. Tyrer, M. Uda, R.M. van Dam, J.B. van Meurs, P. Vollenweider, G. Waeber, N.J. Wareham, D.M. Waterworth, M.N. Weedon, H.E. Wichmann, G. Willemsen, J.F. Wilson, A.F. Wright, L. Young, G. Zhai, W.V. Zhuang, L.J. Bierut, D.I. Boomsma, H.A. Boyd, L. Crisponi, E.W. Demerath, C.M. van Duijn, M.J. Econs, T.B. Harris, D.J. Hunter, R.J. Loos, A. Metspalu, G.W. Montgomery, P.M. Ridker, T.D. Spector, E.A. Streeten, K. Stefansson, U. Thorsteinsdottir, A.G. Uitterlinden, E. Widen, J.M. Murabito, K.K. Ong and A. Murray, Thirty new loci for age at menarche identified by a meta-analysis of genome-wide association studies. Nat Genet, 2010. 42(12): p. 1077-85.

123. Wolpin, B.M., P. Kraft, M. Gross, K. Helzlsouer, H.B. Bueno-de-Mesquita, E. Steplowski, R.Z. Stolzenberg-Solomon, A.A. Arslan, E.J. Jacobs, A. Lacroix, G. Petersen, W. Zheng, D. Albanes, N.E. Allen, L. Amundadottir, G. Anderson, M.C. Boutron-Ruault, J.E. Buring, F. Canzian, S.J. Chanock, S. Clipp, J.M. Gaziano, E.L. Giovannucci, G. Hallmans, S.E. Hankinson, R.N. Hoover, D.J. Hunter, A. Hutchinson, K. Jacobs, C. Kooperberg, S.M. Lynch, J.B. Mendelsohn, D.S. Michaud, K. Overvad, A.V. Patel, A. Rajkovic, M.J. Sanchez, X.O. Shu, N. Slimani, G. Thomas, G.S. Tobias, D. Trichopoulos, P. Vineis, J. Virtamo, J. Wactawski-Wende, K. Yu, A. Zeleniuch-Jacquotte, P. Hartge, and C.S. Fuchs, Pancreatic cancer risk and ABO blood group alleles: results from the pancreatic cancer cohort consortium. Cancer Res, 2010. 70(3): p. 1015-23.

124. Karageorgi, S., S.E. Hankinson, P. Kraft, and I. De Vivo, Reproductive factors and postmenopausal hormone use in relation to endometrial cancer risk in the Nurses' Health Study cohort 1976-2004. Int J Cancer, 2010. 126(1): p. 208-16.

125. Voight, B.F., L.J. Scott, V. Steinthorsdottir, A.P. Morris, C. Dina, R.P. Welch, E. Zeggini, C. Huth, Y.S. Aulchenko, G. Thorleifsson, L.J. McCulloch, T. Ferreira, H. Grallert, N. Amin, G. Wu, C.J. Willer, S. Raychaudhuri, S.A. McCarroll, C. Langenberg, O.M. Hofmann, J. Dupuis, L. Qi, A.V. Segre, M. van Hoek, P. Navarro, K. Ardlie, B. Balkau, R. Benediktsson, A.J. Bennett, R. Blagieva, E. Boerwinkle, L.L. Bonnycastle, K. Bengtsson Bostrom, B. Bravenboer, S. Bumpstead, N.P. Burtt, G. Charpentier, P.S. Chines, M. Cornelis, D.J. Couper, G. Crawford, A.S. Doney, K.S. Elliott, A.L. Elliott, M.R. Erdos, C.S. Fox, C.S. Franklin, M. Ganser, C. Gieger, N. Grarup, T. Green, S. Griffin, C.J. Groves, C. Guiducci, S. Hadjadj, N. Hassanali, C. Herder, B. Isomaa, A.U. Jackson, P.R. Johnson, T. Jorgensen, W.H. Kao, N. Klopp, A. Kong, P. Kraft, J. Kuusisto, T. Lauritzen, M. Li, A. Lieverse, C.M. Lindgren, V. Lyssenko, M. Marre, T. Meitinger, K. Midthjell, M.A. Morken, N. Narisu, P. Nilsson, K.R. Owen, F.

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Payne, J.R. Perry, A.K. Petersen, C. Platou, C. Proenca, I. Prokopenko, W. Rathmann, N.W. Rayner, N.R. Robertson, G. Rocheleau, M. Roden, M.J. Sampson, R. Saxena, B.M. Shields, P. Shrader, G. Sigurdsson, T. Sparso, K. Strassburger, H.M. Stringham, Q. Sun, A.J. Swift, B. Thorand, J. Tichet, T. Tuomi, R.M. van Dam, T.W. van Haeften, T. van Herpt, J.V. van Vliet-Ostaptchouk, G.B. Walters, M.N. Weedon, C. Wijmenga, J. Witteman, R.N. Bergman, S. Cauchi, F.S. Collins, A.L. Gloyn, U. Gyllensten, T. Hansen, W.A. Hide, G.A. Hitman, A. Hofman, D.J. Hunter, K. Hveem, M. Laakso, K.L. Mohlke, A.D. Morris, C.N. Palmer, P.P. Pramstaller, I. Rudan, E. Sijbrands, L.D. Stein, J. Tuomilehto, A. Uitterlinden, M. Walker, N.J. Wareham, R.M. Watanabe, G.R. Abecasis, B.O. Boehm, H. Campbell, M.J. Daly, A.T. Hattersley, F.B. Hu, J.B. Meigs, J.S. Pankow, O. Pedersen, H.E. Wichmann, I. Barroso, J.C. Florez, T.M. Frayling, L. Groop, R. Sladek, U. Thorsteinsdottir, J.F. Wilson, T. Illig, P. Froguel, C.M. van Duijn, K. Stefansson, D. Altshuler, M. Boehnke and M.I. McCarthy, Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. Nat Genet, 2010. 42(7): p. 579-89.

126. Ahn, J., K. Yu, R. Stolzenberg-Solomon, K.C. Simon, M.L. McCullough, L. Gallicchio, E.J. Jacobs, A. Ascherio, K. Helzlsouer, K.B. Jacobs, Q. Li, S.J. Weinstein, M. Purdue, J. Virtamo, R. Horst, W. Wheeler, S. Chanock, D.J. Hunter, R.B. Hayes, P. Kraft, and D. Albanes, Genome-wide association study of circulating vitamin D levels. Hum Mol Genet, 2010. 19(13): p. 2739-45.

127. Qi, L., M.C. Cornelis, P. Kraft, K.J. Stanya, W.H. Linda Kao, J.S. Pankow, J. Dupuis, J.C. Florez, C.S. Fox, G. Pare, Q. Sun, C.J. Girman, C.C. Laurie, D.B. Mirel, T.A. Manolio, D.I. Chasman, E. Boerwinkle, P.M. Ridker, D.J. Hunter, J.B. Meigs, C.H. Lee, F.B. Hu, and R.M. van Dam, Genetic variants at 2q24 are associated with susceptibility to type 2 diabetes. Hum Mol Genet, 2010. 19(13): p. 2706-15.

128. Karlson, E.W., L.B. Chibnik, P. Kraft, J. Cui, B.T. Keenan, B. Ding, S. Raychaudhuri, L. Klareskog, L. Alfredsson, and R.M. Plenge, Cumulative association of 22 genetic variants with seropositive rheumatoid arthritis risk. Ann Rheum Dis, 2010. 69(6): p. 1077-85.

129. Menashe, I., D. Maeder, M. Garcia-Closas, J.D. Figueroa, S. Bhattacharjee, M. Rotunno, P. Kraft, D.J. Hunter, S.J. Chanock, P.S. Rosenberg, and N. Chatterjee, Pathway analysis of breast cancer genome-wide association study highlights three pathways and one canonical signaling cascade. Cancer Res, 2010. 70(11): p. 4453-9.

130. Wu, M.C., P. Kraft, M.P. Epstein, D.M. Taylor, S.J. Chanock, D.J. Hunter, and X. Lin, Powerful SNP-set analysis for case-control genome-wide association studies. Am J Hum Genet, 2010. 86(6): p. 929-42.

131. Dossus, L., R. Kaaks, F. Canzian, D. Albanes, S.I. Berndt, H. Boeing, J. Buring, S.J. Chanock, F. Clavel-Chapelon, H.S. Feigelson, J.M. Gaziano, E. Giovannucci, C. Gonzalez, C.A. Haiman, G. Hallmans, S.E. Hankinson, R.B. Hayes, B.E. Henderson, R.N. Hoover, D.J. Hunter, K.T. Khaw, L.N. Kolonel, P. Kraft, J. Ma, L. Le Marchand, E. Lund, P.H. Peeters, M. Stampfer, D.O. Stram, G. Thomas, M.J. Thun, A. Tjonneland, D. Trichopoulos, R. Tumino, E. Riboli, J. Virtamo, S.J. Weinstein, M. Yeager, R.G. Ziegler, and D.G. Cox, PTGS2 and IL6 genetic variation and risk of breast and prostate cancer: results from the Breast and Prostate Cancer Cohort Consortium (BPC3). Carcinogenesis, 2010. 31(3): p. 455-61.

132. Kraft, P.*, G.M. Petersen, *, L. Amundadottir*, C.S. Fuchs*, R.Z. Stolzenberg-Solomon, K.B. Jacobs, A.A. Arslan, H.B. Bueno-de-Mesquita, S. Gallinger, M. Gross, K. Helzlsouer, E.A. Holly, E.J. Jacobs, A.P. Klein, A. LaCroix, D. Li, M.T. Mandelson, S.H. Olson, H.A. Risch, W. Zheng, D. Albanes, W.R. Bamlet, C.D. Berg, M.C. Boutron-Ruault, J.E. Buring, P.M. Bracci, F. Canzian, S. Clipp, M. Cotterchio, M. de Andrade, E.J. Duell, J.M. Gaziano, E.L. Giovannucci, M. Goggins, G. Hallmans, S.E. Hankinson, M. Hassan, B. Howard, D.J. Hunter, A. Hutchinson, M. Jenab, R. Kaaks, C. Kooperberg, V. Krogh, R.C. Kurtz, S.M. Lynch, R.R. McWilliams, J.B. Mendelsohn, D.S. Michaud, H. Parikh, A.V. Patel, P.H. Peeters, A. Rajkovic, E. Riboli, L. Rodriguez, D. Seminara, X.O. Shu, G. Thomas, A. Tjonneland, G.S. Tobias, D. Trichopoulos, S.K. Van Den Eeden, J. Virtamo, J. Wactawski-Wende, Z. Wang, B.M. Wolpin, H. Yu, K. Yu, A. Zeleniuch-Jacquotte, J.F. Fraumeni, Jr., R.N. Hoover, P. Hartge, and S.J.

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Chanock, A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33. Nat Genet, 2010. 42(3): p. 224-8.

133. Lindstrom, S., D.J. Hunter, H. Gronberg, P. Stattin, F. Wiklund, J. Xu, S.J. Chanock, R. Hayes, and P. Kraft, Sequence variants in the TLR4 and TLR6-1-10 genes and prostate cancer risk. Results based on pooled analysis from three independent studies. Cancer Epidemiol Biomarkers Prev, 2010. 19(3): p. 873-6.

134. Paulus, J.K., K. Asomaning, P. Kraft, B.E. Johnson, X. Lin, and D.C. Christiani, Parity and risk of lung cancer in women. Am J Epidemiol, 2010. 171(5): p. 557-63.

135. Bhattacharjee, S., Z. Wang, J. Ciampa, P. Kraft, S. Chanock, K. Yu, and N. Chatterjee, Using principal components of genetic variation for robust and powerful detection of gene-gene interactions in case-control and case-only studies. Am J Hum Genet, 2010. 86(3): p. 331-42.

136. Koutros, S., F.R. Schumacher, R.B. Hayes, J. Ma, W.Y. Huang, D. Albanes, F. Canzian, S.J. Chanock, E.D. Crawford, W.R. Diver, H.S. Feigelson, E. Giovanucci, C.A. Haiman, B.E. Henderson, D.J. Hunter, R. Kaaks, L.N. Kolonel, P. Kraft, L. Le Marchand, E. Riboli, A. Siddiq, M.J. Stampfer, D.O. Stram, G. Thomas, R.C. Travis, M.J. Thun, M. Yeager, and S.I. Berndt, Pooled analysis of phosphatidylinositol 3-kinase pathway variants and risk of prostate cancer. Cancer Res, 2010. 70(6): p. 2389-96.

137. Wacholder, S., P. Hartge, R. Prentice, M. Garcia-Closas, H.S. Feigelson, W.R. Diver, M.J. Thun, D.G. Cox, S.E. Hankinson, P. Kraft, B. Rosner, C.D. Berg, L.A. Brinton, J. Lissowska, M.E. Sherman, R. Chlebowski, C. Kooperberg, R.D. Jackson, D.W. Buckman, P. Hui, R. Pfeiffer, K.B. Jacobs, G.D. Thomas, R.N. Hoover, M.H. Gail, S.J. Chanock, and D.J. Hunter, Performance of common genetic variants in breast-cancer risk models. N Engl J Med, 2010. 362(11): p. 986-93.

138. Prokunina-Olsson, L., Y.P. Fu, W. Tang, K.B. Jacobs, R.B. Hayes, P. Kraft, S.I. Berndt, S. Wacholder, K. Yu, A. Hutchinson, H. Spencer Feigelson, M.J. Thun, W.R. Diver, D. Albanes, J. Virtamo, S. Weinstein, F.R. Schumacher, G. Cancel-Tassin, O. Cussenot, A. Valeri, G.L. Andriole, E.D. Crawford, C.A. Haiman, B.E. Henderson, L. Kolonel, L. Le Marchand, A. Siddiq, E. Riboli, R. Travis, R. Kaaks, W.B. Isaacs, S.D. Isaacs, H. Gronberg, F. Wiklund, J. Xu, L.J. Vatten, K. Hveem, M. Kumle, M. Tucker, R.N. Hoover, J.F. Fraumeni, Jr., D.J. Hunter, G. Thomas, N. Chatterjee, S.J. Chanock, and M. Yeager, Refining the prostate cancer genetic association within the JAZF1 gene on chromosome 7p15.2. Cancer Epidemiol Biomarkers Prev, 2010. 19(5): p. 1349-55.

139. The Tobacco and Genetics Consortium, Furberg H, Kim Y, Dackor J, Boerwinkle E, Franceschini N, Ardissino D, Bernardinelli L, Mannucci PM, Mauri F, Merlini PA, Absher D, Assimes TL, Fortmann SP, Iribarren C, Knowles JW, Quertermous T, Ferrucci L, Tanaka T, Bis JC, Furberg CD, Haritunians T, McKnight B, Psaty BM, Taylor KD, Thacker EL, Almgren P, Groop L, Ladenvall C, Boehnke M, Jackson AU, Mohlke KL, Stringham HM, Tuomilehto J, Benjamin EJ, Hwang SJ, Levy D, Preis SR, Vasan RS, Duan J, Gejman PV, Levinson DF, Sanders AR, Shi J, Lips EH, McKay JD, Agudo A, Barzan L, Bencko V, Benhamou S, Castellsagué X, Canova C, Conway DI, Fabianova E, Foretova L, Janout V, Healy CM, Holcátová I, Kjaerheim K, Lagiou P, Lissowska J, Lowry R, Macfarlane TV, Mates D, Richiardi L, Rudnai P, Szeszenia-Dabrowska N, Zaridze D, Znaor A, Lathrop M, Brennan P, Bandinelli S, Frayling TM, Guralnik JM, Milaneschi Y, Perry JR, Altshuler D, Elosua R, Kathiresan S, Lucas G, Melander O, O'Donnell CJ, Salomaa V, Schwartz SM, Voight BF, Penninx BW, Smit JH, Vogelzangs N, Boomsma DI, de Geus EJ, Vink JM, Willemsen G, Chanock SJ, Gu F, Hankinson SE, Hunter DJ, Hofman A, Tiemeier H, Uitterlinden AG, van Duijn CM, Walter S, Chasman DI, Everett BM, Paré G, Ridker PM, Li MD, Maes HH, Audrain-McGovern J, Posthuma D, Thornton LM, Lerman C, Kaprio J, Rose JE, Ioannidis JP, Kraft P, Lin DY, Sullivan PF. Genome-wide meta-analyses identify multiple loci associated with smoking behavior. Nat Genet. 2010 May;42(5):441-7. PMCID: PMC2914600.

140. Penney, K.L., F.R. Schumacher, H. Li, P. Kraft, J.S. Morris, T. Kurth, L.A. Mucci, D.J. Hunter, P.W. Kantoff, M.J. Stampfer, and J. Ma, A large prospective study of SEP15 genetic variation, interaction with plasma selenium levels, and prostate cancer risk and survival. Cancer Prev Res (Phila), 2010. 3(5): p. 604-10.

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141. Qi, L., M.C. Cornelis, P. Kraft, M. Jensen, R.M. van Dam, Q. Sun, C.J. Girman, C.C. Laurie, D.B. Mirel, D.J. Hunter, E. Rimm, and F.B. Hu, Genetic variants in ABO blood group region, plasma soluble E-selectin levels and risk of type 2 diabetes. Hum Mol Genet, 2010. 19(9): p. 1856-62.

142. Sun, Q., M.C. Cornelis, P. Kraft, L. Qi, R.M. van Dam, C.J. Girman, C.C. Laurie, D.B. Mirel, H. Gong, C.C. Sheu, D.C. Christiani, D.J. Hunter, C.S. Mantzoros, and F.B. Hu, Genome-wide association study identifies polymorphisms in LEPR as determinants of plasma soluble leptin receptor levels. Hum Mol Genet, 2010. 19(9): p. 1846-55.

143. Arslan, A.A., K.J. Helzlsouer, C. Kooperberg, X.O. Shu, E. Steplowski, H.B. Bueno-de-Mesquita, C.S. Fuchs, M.D. Gross, E.J. Jacobs, A.Z. Lacroix, G.M. Petersen, R.Z. Stolzenberg-Solomon, W. Zheng, D. Albanes, L. Amundadottir, W.R. Bamlet, A. Barricarte, S.A. Bingham, H. Boeing, M.C. Boutron-Ruault, J.E. Buring, S.J. Chanock, S. Clipp, J.M. Gaziano, E.L. Giovannucci, S.E. Hankinson, P. Hartge, R.N. Hoover, D.J. Hunter, A. Hutchinson, K.B. Jacobs, P. Kraft, S.M. Lynch, J. Manjer, J.E. Manson, A. McTiernan, R.R. McWilliams, J.B. Mendelsohn, D.S. Michaud, D. Palli, T.E. Rohan, N. Slimani, G. Thomas, A. Tjonneland, G.S. Tobias, D. Trichopoulos, J. Virtamo, B.M. Wolpin, K. Yu, A. Zeleniuch-Jacquotte, and A.V. Patel, Anthropometric measures, body mass index, and pancreatic cancer: a pooled analysis from the Pancreatic Cancer Cohort Consortium (PanScan). Arch Intern Med, 2010. 170(9): p. 791-802.

144. Elliott KS, Zeggini E, McCarthy MI, Gudmundsson J, Sulem P, Stacey SN, Thorlacius S, Amundadottir L, Grönberg H, Xu J, Gaborieau V, Eeles RA, Neal DE, Donovan JL, Hamdy FC, Muir K, Hwang SJ, Spitz MR, Zanke B, Carvajal-Carmona L, Brown KM; Australian Melanoma Family Study Investigators, Hayward NK, Macgregor S, Tomlinson IP, Lemire M, Amos CI, Murabito JM, Isaacs WB, Easton DF, Brennan P; PanScan Consortium, Barkardottir RB, Gudbjartsson DF, Rafnar T, Hunter DJ, Chanock SJ, Stefansson K, Ioannidis JP. Evaluation of association of HNF1B variants with diverse cancers: collaborative analysis of data from 19 genome-wide association studies. PLoS One. 2010 May 28;5(5):e10858. PMCID: PMC2878330.

145. He, C., P. Kraft, D.I. Chasman, J.E. Buring, C. Chen, S.E. Hankinson, G. Pare, S. Chanock, P.M. Ridker, and D.J. Hunter, A large-scale candidate gene association study of age at menarche and age at natural menopause. Hum Genet, 2010. 128(5): p. 515-27.

146. Gu, F., F.R. Schumacher, F. Canzian, N.E. Allen, D. Albanes, C.D. Berg, S.I. Berndt, H. Boeing, H.B. Bueno-de-Mesquita, J.E. Buring, N. Chabbert-Buffet, S.J. Chanock, F. Clavel-Chapelon, V. Dumeaux, J.M. Gaziano, E.L. Giovannucci, C.A. Haiman, S.E. Hankinson, R.B. Hayes, B.E. Henderson, D.J. Hunter, R.N. Hoover, M. Johansson, T.J. Key, K.T. Khaw, L.N. Kolonel, P. Lagiou, I.M. Lee, L. LeMarchand, E. Lund, J. Ma, N.C. Onland-Moret, K. Overvad, L. Rodriguez, C. Sacerdote, M.J. Sanchez, M.J. Stampfer, P. Stattin, D.O. Stram, G. Thomas, M.J. Thun, A. Tjonneland, D. Trichopoulos, R. Tumino, J. Virtamo, S.J. Weinstein, W.C. Willett, M. Yeager, S.M. Zhang, R. Kaaks, E. Riboli, R.G. Ziegler, and P. Kraft, Eighteen insulin-like growth factor pathway genes, circulating levels of IGF-I and its binding protein, and risk of prostate and breast cancer. Cancer Epidemiol Biomarkers Prev, 2010. 19(11): p. 2877-87.

147. Wolpin, B.M., C. Kabrhel, R. Varraso, P. Kraft, E.B. Rimm, S.Z. Goldhaber, C.A. Camargo, Jr., and C.S. Fuchs, Prospective study of ABO blood type and the risk of pulmonary embolism in two large cohort studies. Thromb Haemost, 2010. 104(5): p. 962-71.

148. Heid, I.M., A.U. Jackson, J.C. Randall, T.W. Winkler, L. Qi, V. Steinthorsdottir, G. Thorleifsson, M.C. Zillikens, E.K. Speliotes, R. Magi, T. Workalemahu, C.C. White, N. Bouatia-Naji, T.B. Harris, S.I. Berndt, E. Ingelsson, C.J. Willer, M.N. Weedon, J. Luan, S. Vedantam, T. Esko, T.O. Kilpelainen, Z. Kutalik, S. Li, K.L. Monda, A.L. Dixon, C.C. Holmes, L.M. Kaplan, L. Liang, J.L. Min, M.F. Moffatt, C. Molony, G. Nicholson, E.E. Schadt, K.T. Zondervan, M.F. Feitosa, T. Ferreira, H.L. Allen, R.J. Weyant, E. Wheeler, A.R. Wood, K. Estrada, M.E. Goddard, G. Lettre, M. Mangino, D.R. Nyholt, S. Purcell, A.V. Smith, P.M. Visscher, J. Yang, S.A. McCarroll, J. Nemesh, B.F. Voight, D. Absher, N. Amin, T. Aspelund, L. Coin, N.L. Glazer, C. Hayward, N.L. Heard-Costa, J.J. Hottenga, A. Johansson, T. Johnson, M. Kaakinen, K. Kapur, S. Ketkar, J.W. Knowles, P. Kraft, A.T. Kraja, C. Lamina, M.F.

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160. Karageorgi, S., M. McGrath, I.M. Lee, J. Buring, P. Kraft, and I. De Vivo, Polymorphisms in genes hydroxysteroid-dehydrogenase-17b type 2 and type 4 and endometrial cancer risk. Gynecol Oncol, 2011. 121(1): p. 54-8.

161. Cornelis, M.C., K.L. Monda, K. Yu, N. Paynter, E.M. Azzato, S.N. Bennett, S.I. Berndt, E. Boerwinkle, S. Chanock, N. Chatterjee, D. Couper, G. Curhan, G. Heiss, F.B. Hu, D.J. Hunter, K. Jacobs, M.K. Jensen, P. Kraft, M.T. Landi, J.A. Nettleton, M.P. Purdue, P. Rajaraman, E.B. Rimm, L.M. Rose, N. Rothman, D. Silverman, R. Stolzenberg-Solomon, A. Subar, M. Yeager, D.I. Chasman, R.M. van Dam, and N.E. Caporaso, Genome-wide meta-analysis identifies regions on 7p21 (AHR) and 15q24 (CYP1A2) as determinants of habitual caffeine consumption. PLoS Genet, 2011. 7(4): p. e1002033.

162. Speliotes EK, Yerges-Armstrong LM, Wu J, Hernaez R, Kim LJ, Palmer CD, Gudnason V, Eiriksdottir G, Garcia ME, Launer LJ, Nalls MA, Clark JM, Mitchell BD, Shuldiner AR, Butler JL, Tomas M, Hoffmann U, Hwang SJ, Massaro JM, O'Donnell CJ, Sahani DV, Salomaa V, Schadt EE, Schwartz SM, Siscovick DS; NASH CRN; GIANT Consortium; MAGIC Investigators, Voight BF, Carr JJ, Feitosa MF, Harris TB, Fox CS, Smith AV, Kao WH, Hirschhorn JN, Borecki IB; GOLD Consortium. Genome-wide association analysis identifies variants associated with nonalcoholic fatty liver disease that have distinct effects on metabolic traits. PLoS Genet. 2011 Mar;7(3):e1001324.

163. Kote-Jarai, Z., A.A. Olama, G.G. Giles, G. Severi, J. Schleutker, M. Weischer, D. Campa, E. Riboli, T. Key, H. Gronberg, D.J. Hunter, P. Kraft, M.J. Thun, S. Ingles, S. Chanock, D. Albanes, R.B. Hayes, D.E. Neal, F.C. Hamdy, J.L. Donovan, P. Pharoah, F. Schumacher, B.E. Henderson, J.L. Stanford, E.A. Ostrander, K.D. Sorensen, T. Dork, G. Andriole, J.L. Dickinson, C. Cybulski, J. Lubinski, A. Spurdle, J.A. Clements, S. Chambers, J. Aitken, R.A. Gardiner, S.N. Thibodeau, D. Schaid, E.M. John, C. Maier, W. Vogel, K.A. Cooney, J.Y. Park, L. Cannon-Albright, H. Brenner, T. Habuchi, H.W. Zhang, Y.J. Lu, R. Kaneva, K. Muir, S. Benlloch, D.A. Leongamornlert, E.J. Saunders, M. Tymrakiewicz, N. Mahmud, M. Guy, L.T. O'Brien, R.A. Wilkinson, A.L. Hall, E.J. Sawyer, T. Dadaev, J. Morrison, D.P. Dearnaley, A. Horwich, R.A. Huddart, V.S. Khoo, C.C. Parker, N. Van As, C.J. Woodhouse, A. Thompson, T. Christmas, C. Ogden, C.S. Cooper, A. Lophatonanon, M.C. Southey, J.L. Hopper, D.R. English, T.

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Wahlfors, T.L. Tammela, P. Klarskov, B.G. Nordestgaard, M.A. Roder, A. Tybjaerg-Hansen, S.E. Bojesen, R. Travis, F. Canzian, R. Kaaks, F. Wiklund, M. Aly, S. Lindstrom, W.R. Diver, S. Gapstur, M.C. Stern, R. Corral, J. Virtamo, A. Cox, C.A. Haiman, L. Le Marchand, L. Fitzgerald, S. Kolb, E.M. Kwon, D.M. Karyadi, T.F. Orntoft, M. Borre, A. Meyer, J. Serth, M. Yeager, S.I. Berndt, J.R. Marthick, B. Patterson, D. Wokolorczyk, J. Batra, F. Lose, S.K. McDonnell, A.D. Joshi, A. Shahabi, A.E. Rinckleb, A. Ray, T.A. Sellers, H.Y. Lin, R.A. Stephenson, J. Farnham, H. Muller, D. Rothenbacher, N. Tsuchiya, S. Narita, G.W. Cao, C. Slavov, V. Mitev, D.F. Easton and R.A. Eeles, Seven prostate cancer susceptibility loci identified by a multi-stage genome-wide association study. Nat Genet, 2011. 43(8): p. 785-91.

164. Berndt, S.I., J. Sampson, M. Yeager, K.B. Jacobs, Z. Wang, A. Hutchinson, C. Chung, N. Orr, S. Wacholder, N. Chatterjee, K. Yu, P. Kraft, H.S. Feigelson, M.J. Thun, W.R. Diver, D. Albanes, J. Virtamo, S. Weinstein, F.R. Schumacher, G. Cancel-Tassin, O. Cussenot, A. Valeri, G.L. Andriole, E.D. Crawford, C. Haiman, B. Henderson, L. Kolonel, L. Le Marchand, A. Siddiq, E. Riboli, R.C. Travis, R. Kaaks, W. Isaacs, S. Isaacs, K.E. Wiley, H. Gronberg, F. Wiklund, P. Stattin, J. Xu, S.L. Zheng, J. Sun, L.J. Vatten, K. Hveem, I. Njolstad, D.S. Gerhard, M. Tucker, R.B. Hayes, R.N. Hoover, J.F. Fraumeni, Jr., D.J. Hunter, G. Thomas, and S.J. Chanock, Large-scale fine mapping of the HNF1B locus and prostate cancer risk. Hum Mol Genet, 2011. 20(16): p. 3322-9.

165. Campa, D., R. Kaaks, L. Le Marchand, C.A. Haiman, R.C. Travis, C.D. Berg, J.E. Buring, S.J. Chanock, W.R. Diver, L. Dostal, A. Fournier, S.E. Hankinson, B.E. Henderson, R.N. Hoover, C. Isaacs, M. Johansson, L.N. Kolonel, P. Kraft, I.M. Lee, C.A. McCarty, K. Overvad, S. Panico, P.H. Peeters, E. Riboli, M.J. Sanchez, F.R. Schumacher, G. Skeie, D.O. Stram, M.J. Thun, D. Trichopoulos, S. Zhang, R.G. Ziegler, D.J. Hunter, S. Lindstrom, and F. Canzian, Interactions between genetic variants and breast cancer risk factors in the breast and prostate cancer cohort consortium. J Natl Cancer Inst, 2011. 103(16): p. 1252-63.

166. Beckmann, L., A. Husing, V.W. Setiawan, P. Amiano, F. Clavel-Chapelon, S.J. Chanock, D.G. Cox, R. Diver, L. Dossus, H.S. Feigelson, C. Haiman, G. Hallmans, R.B. Hayes, B.E. Henderson, R.N. Hoover, D.J. Hunter, K. Khaw, L.N. Kolonel, P. Kraft, E. Lund, L. Le Marchand, P.H. Peeters, E. Riboli, D. Stram, G. Thomas, M.J. Thun, R. Tumino, D. Trichopoulos, U. Vogel, W.C. Willett, M. Yeager, R. Ziegler, S.E. Hankinson, and R. Kaaks, Comprehensive analysis of hormone and genetic variation in 36 genes related to steroid hormone metabolism in pre- and postmenopausal women from the breast and prostate cancer cohort consortium (BPC3). J Clin Endocrinol Metab, 2011. 96(2): p. E360-7.

167. Monsees, G.M., P. Kraft, S.J. Chanock, D.J. Hunter, and J. Han, Comprehensive screen of genetic variation in DNA repair pathway genes and postmenopausal breast cancer risk. Breast Cancer Res Treat, 2011. 125(1): p. 207-14.

168. Painter, J.N., C.A. Anderson, D.R. Nyholt, S. Macgregor, J. Lin, S.H. Lee, A. Lambert, Z.Z. Zhao, F. Roseman, Q. Guo, S.D. Gordon, L. Wallace, A.K. Henders, P.M. Visscher, P. Kraft, N.G. Martin, A.P. Morris, S.A. Treloar, S.H. Kennedy, S.A. Missmer, G.W. Montgomery, and K.T. Zondervan, Genome-wide association study identifies a locus at 7p15.2 associated with endometriosis. Nat Genet, 2011. 43(1): p. 51-4.

169. Nan, H., M. Xu, J. Zhang, M. Zhang, P. Kraft, A.A. Qureshi, C. Chen, Q. Guo, F.B. Hu, E.B. Rimm, G. Curhan, Y. Song, C.I. Amos, L.E. Wang, J.E. Lee, Q. Wei, D.J. Hunter, and J. Han, Genome-wide association study identifies nidogen 1 (NID1) as a susceptibility locus to cutaneous nevi and melanoma risk. Hum Mol Genet, 2011. 20(13): p. 2673-9.

170. Sinnott, J.A. and P. Kraft, Artifact due to differential error when cases and controls are imputed from different platforms. Hum Genet, 2012. 131(1):111-119.

171. Chung, C.C., J. Ciampa, M. Yeager, K.B. Jacobs, S.I. Berndt, R.B. Hayes, J. Gonzalez-Bosquet, P. Kraft, S. Wacholder, N. Orr, K. Yu, A. Hutchinson, J. Boland, Q. Chen, H.S. Feigelson, M.J. Thun, W.R. Diver, D. Albanes, J. Virtamo, S. Weinstein, F.R. Schumacher, G. Cancel-Tassin, O. Cussenot, A. Valeri, G.L. Andriole, E.D. Crawford, C.A. Haiman, B.E. Henderson, L. Kolonel, L. Le Marchand, A. Siddiq, E. Riboli, T.J. Key, R. Kaaks, W.B. Isaacs, S.D. Isaacs, H. Gronberg, F. Wiklund, J. Xu, L.J.

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Vatten, K. Hveem, I. Njolstad, D.S. Gerhard, M. Tucker, R.N. Hoover, J.F. Fraumeni, Jr., D.J. Hunter, G. Thomas, N. Chatterjee, and S.J. Chanock, Fine mapping of a region of chromosome 11q13 reveals multiple independent loci associated with risk of prostate cancer. Hum Mol Genet, 2011. 20(14): p. 2869-78.

172. Penney, K.L., F.R. Schumacher, P. Kraft, L.A. Mucci, H.D. Sesso, J. Ma, Y. Niu, J.K. Cheong, D.J. Hunter, M.J. Stampfer, and S.I. Hsu, Association of KLK3 (PSA) genetic variants with prostate cancer risk and PSA levels. Carcinogenesis, 2011. 32(6): p. 853-9.

173. Penney, K.L., J.A. Sinnott, K. Fall, Y. Pawitan, Y. Hoshida, P. Kraft, J.R. Stark, M. Fiorentino, S. Perner, S. Finn, S. Calza, R. Flavin, M.L. Freedman, S. Setlur, H.D. Sesso, S.O. Andersson, N. Martin, P.W. Kantoff, J.E. Johansson, H.O. Adami, M.A. Rubin, M. Loda, T.R. Golub, O. Andren, M.J. Stampfer, and L.A. Mucci, mRNA expression signature of Gleason grade predicts lethal prostate cancer. J Clin Oncol, 2011. 29(17): p. 2391-6.

174. Paulus, J.K., W. Zhou, P. Kraft, B.E. Johnson, X. Lin, and D.C. Christiani, Haplotypes of estrogen receptor-beta and risk of non-small cell lung cancer in women. Lung Cancer, 2011. 71(3): p. 258-63.

175. Lin, W., A.A. Qureshi, P. Kraft, H. Nan, Q. Guo, F.B. Hu, M.K. Jensen, and J. Han, ASIP genetic variants and the number of non-melanoma skin cancers. Cancer Causes Control, 2011. 22(3): p. 495-501.

176. Tchetgen Tchetgen, E.J. and P. Kraft, On the robustness of tests of genetic associations incorporating gene-environment interaction when the environmental exposure is misspecified. Epidemiology, 2011. 22(2): p. 257-61.

177. Lindstrom, S., C.M. Vachon, J. Li, J. Varghese, D. Thompson, R. Warren, J. Brown, J. Leyland, T. Audley, N.J. Wareham, R.J. Loos, A.D. Paterson, J. Rommens, D. Waggott, L.J. Martin, C.G. Scott, V.S. Pankratz, S.E. Hankinson, A. Hazra, D.J. Hunter, J.L. Hopper, M.C. Southey, S.J. Chanock, S. Silva Idos, J. Liu, L. Eriksson, F.J. Couch, J. Stone, C. Apicella, K. Czene, P. Kraft, P. Hall, D.F. Easton, N.F. Boyd, and R.M. Tamimi, Common variants in ZNF365 are associated with both mammographic density and breast cancer risk. Nat Genet, 2011. 43(3): p. 185-7.

178. Khalili, H., B.M. Wolpin, E.S. Huang, E.L. Giovannucci, P. Kraft, C.S. Fuchs, and A.T. Chan, ABO blood group and risk of colorectal cancer. Cancer Epidemiol Biomarkers Prev, 2011. 20(5): p. 1017-20.

179. Ciampa, J., M. Yeager, L. Amundadottir, K. Jacobs, P. Kraft, C. Chung, S. Wacholder, K. Yu, W. Wheeler, M.J. Thun, W.R. Divers, S. Gapstur, D. Albanes, J. Virtamo, S. Weinstein, E. Giovannucci, W.C. Willett, G. Cancel-Tassin, O. Cussenot, A. Valeri, D. Hunter, R. Hoover, G. Thomas, S. Chanock, and N. Chatterjee, Large-scale exploration of gene-gene interactions in prostate cancer using a multistage genome-wide association study. Cancer Res, 2011. 71(9): p. 3287-95.

180. Milne, R.L., E.L. Goode, M. Garcia-Closas, F.J. Couch, G. Severi, R. Hein, Z. Fredericksen, N. Malats, M.P. Zamora, J.I. Perez, J. Benitez, T. Dork, P. Schurmann, J.H. Karstens, P. Hillemanns, A. Cox, I.W. Brock, G. Elliot, S.S. Cross, S. Seal, C. Turnbull, A. Renwick, N. Rahman, C.Y. Shen, J.C. Yu, C.S. Huang, M.F. Hou, B.G. Nordestgaard, S.E. Bojesen, C. Lanng, G.G. Alnaes, V. Kristensen, A.L. Borrensen-Dale, J.L. Hopper, G.S. Dite, C. Apicella, M.C. Southey, D. Lambrechts, B.T. Yesilyurt, G. Floris, K. Leunen, S. Sangrajrang, V. Gaborieau, P. Brennan, J. McKay, J. Chang-Claude, S. Wang-Gohrke, P. Radice, P. Peterlongo, S. Manoukian, M. Barile, G.G. Giles, L. Baglietto, E.M. John, A. Miron, S.J. Chanock, J. Lissowska, M.E. Sherman, J.D. Figueroa, N.V. Bogdanova, N.N. Antonenkova, I.V. Zalutsky, Y.I. Rogov, P.A. Fasching, C.M. Bayer, A.B. Ekici, M.W. Beckmann, H. Brenner, H. Muller, V. Arndt, C. Stegmaier, I.L. Andrulis, J.A. Knight, G. Glendon, A.M. Mulligan, A. Mannermaa, V. Kataja, V.M. Kosma, J.M. Hartikainen, A. Meindl, J. Heil, C.R. Bartram, R.K. Schmutzler, G.D. Thomas, R.N. Hoover, O. Fletcher, L.J. Gibson, I. Dos Santos Silva, J. Peto, S. Nickels, D. Flesch-Janys, H. Anton-Culver, A. Ziogas, E. Sawyer, I. Tomlinson, M. Kerin, N. Miller, M.K. Schmidt, A. Broeks, L.J. Van 't Veer, R.A. Tollenaar, P.D. Pharoah, A.M. Dunning, K.A. Pooley, F. Marme, A. Schneeweiss, C. Sohn, B. Burwinkel, A. Jakubowska, J. Lubinski, K. Jaworska, K. Durda, D. Kang, K.Y. Yoo, D.Y. Noh, S.H. Ahn, D.J. Hunter, S.E. Hankinson, P. Kraft, S. Lindstrom, X. Chen, J. Beesley, U. Hamann, V. Harth, C. Justenhoven, R. Winqvist, K. Pylkas, A. Jukkola-Vuorinen, M. Grip,

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M. Hooning, A. Hollestelle, R.A. Oldenburg, M. Tilanus-Linthorst, E. Khusnutdinova, M. Bermisheva, D. Prokofieva, A. Farahtdinova, J.E. Olson, X. Wang, M.K. Humphreys, Q. Wang, G. Chenevix-Trench and D.F. Easton, Confirmation of 5p12 As a Susceptibility Locus for Progesterone-Receptor-Positive, Lower Grade Breast Cancer. Cancer Epidemiol Biomarkers Prev, 2011. 20(10): p. 2222-2231.

181. Major, J.M., K. Yu, W. Wheeler, H. Zhang, M.C. Cornelis, M.E. Wright, M. Yeager, K. Snyder, S.J. Weinstein, A. Mondul, H. Eliassen, M. Purdue, A. Hazra, C.A. McCarty, S. Hendrickson, J. Virtamo, D. Hunter, S. Chanock, P. Kraft, and D. Albanes, Genome-wide association study identifies common variants associated with circulating vitamin E levels. Hum Mol Genet, 2011. 20(19): p. 3876-83.

182. Schumacher, F.R., S.I. Berndt, A. Siddiq, K.B. Jacobs, Z. Wang, S. Lindstrom, V.L. Stevens, C. Chen, A.M. Mondul, R.C. Travis, D.O. Stram, R.A. Eeles, D.F. Easton, G. Giles, J.L. Hopper, D.E. Neal, F.C. Hamdy, J.L. Donovan, K. Muir, A.A. Al Olama, Z. Kote-Jarai, M. Guy, G. Severi, H. Gronberg, W.B. Isaacs, R. Karlsson, F. Wiklund, J. Xu, N.E. Allen, G.L. Andriole, A. Barricarte, H. Boeing, H. Bas Bueno-de-Mesquita, E.D. Crawford, W.R. Diver, C.A. Gonzalez, J.M. Gaziano, E.L. Giovannucci, M. Johansson, L. Le Marchand, J. Ma, S. Sieri, P. Stattin, M.J. Stampfer, A. Tjonneland, P. Vineis, J. Virtamo, U. Vogel, S.J. Weinstein, M. Yeager, M.J. Thun, L.N. Kolonel, B.E. Henderson, D. Albanes, R.B. Hayes, H. Spencer Feigelson, E. Riboli, D.J. Hunter, S.J. Chanock, C.A. Haiman, and P. Kraft, Genome-wide association study identifies new prostate cancer susceptibility loci. Hum Mol Genet, 2011. 20(19): p. 3867-75.

183. Kasperzyk, J.L., E.T. Chang, B.M. Birmann, P. Kraft, T. Zheng, and N.E. Mueller, Nutrients and Genetic Variation Involved in One-Carbon Metabolism and Hodgkin Lymphoma Risk: A Population-based Case-Control Study. Am J Epidemiol, 2011. 174(7): p. 816-27.

184. Simon, K.C., K.L. Munger, P. Kraft, D.J. Hunter, P.L. De Jager, and A. Ascherio, Genetic predictors of 25-hydroxyvitamin D levels and risk of multiple sclerosis. J Neurol, 2011. 258(9): p. 1676-82.

185. Machiela, M.J., C.Y. Chen, C. Chen, S.J. Chanock, D.J. Hunter, and P. Kraft, Evaluation of polygenic risk scores for predicting breast and prostate cancer risk. Genet Epidemiol, 2011. 35(6): p. 506-14.

186. Nan, H., M. Xu, P. Kraft, A.A. Qureshi, C. Chen, Q. Guo, F.B. Hu, G. Curhan, C.I. Amos, L.E. Wang, J.E. Lee, Q. Wei, D.J. Hunter, and J. Han, Genome-wide association study identifies novel alleles associated with risk of cutaneous basal cell carcinoma and squamous cell carcinoma. Hum Mol Genet, 2011. 20(18): p. 3718-24.

187. Zhu, H., N. Shyh-Chang, AV Segre, G. Shinoda, SP Shah, WS Einhorn, A. Takeuchi, JM Engreitz, JP Hagan, MG Kharas, A. Urbach, JE Thornton, R. Triboulet, RI Gregory, DIAGRAM Consortium, MAGIC Investigators, D. Altshuler, and GQ Daley, The Lin28/let-7 axis regulates glucose metabolism. Cell, 2011. 147(1):81-94.

188. Strawbridge RJ, J. Dupuis, I. Prokopenko, A. Barker, E. Ahlqvist, D. Rybin, JR Petrie, ME Travers, N. Bouatia-Naji, AS Dimas, A. Nica, E. Wheeler, H. Chen, BF Voight, J. Taneera, S. Kanoni, JF Peden, F. Turrini, S. Gustafsson, C. Zabena, P. Almgren, DJ Barker, D. Barnes, EM Dennison, JG Eriksson, P. Eriksson, E. Eury, L. Folkersen, CS Fox, TM Frayling, A. Goel, HF Gu, M. Horikoshi, B. Isomaa, AU Jackson, KA Jameson, E. Kajantie, J. Kerr-Conte, T. Kuulasmaa, J. Kuusisto, RJ Loos, J. Luan, K. Makrilakis, AK Manning, MT Martinez-Larrad, N. Narisu, M. Nastase Mannila, J. Ohrvik, C. Osmond, L. Pascoe, F. Payne, AA Sayer, B. Sennblad, A. Silveira, A. Stancakova, K. Stirrups, AJ Swift, AC Syvänen, T. Tuomi, FM van 't Hooft, M. Walker, MN Weedon, W. Xie, B. Zethelius, DIAGRAM Consortium, GIANT Consortium, MuTHER Consortium, CARDIoGRAM Consortium, C4D Consortium, H. Ongen, A. Mälarstig, JC Hopewell, D. Saleheen, J. Chambers, S. Parish, J. Danesh, J. Kooner, CG Ostenson, L. Lind, CC Cooper, M. Serrano-Rios, E. Ferrannini, TJ Forsen, R. Clarke, MG Franzosi, U. Seedorf, H. Watkins, P. Froguel, P. Johnson, P. Deloukas, FS Collins, M. Laakso, ET Dermitzakis, M. Boehnke, MI McCarthy, NJ Wareham, L. Groop, F. Pattou, AL Gloyn, GV Dedoussis, V. Lyssenko, JB Meigs, I. Barroso, RM Watanabe, E. Ingelsson, C. Langenberg, A. Hamsten, and JC Florez, Genome-wide association identifies nine common variants associated with fasting proinsulin and provides new insights into the pathophysiology of type 2 diabetes. Diabetes, 2011. 60(10):2624-34.

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189. Chambers JC, W. Zhang, J. Sehmi, X. Li, MN Wass, P. Van der Harst, H. Holm, S. Sanna, M. Kavousi, SE Baumeister, LJ Coin, G. Deng, C. Gieger, NL Heard-Costa, JJ Hottenga, B. Kühnel, V. Kumar, V. Lagou, L. Liang, J. Luan, PM Vidal, I. Mateo Leach, PF O'Reilly, JF Peden, N. Rahmioglu, P. Soininen, EK Speliotes, X. Yuan, G. Thorleifsson, BZ Alizadeh, LD Atwood, IB Borecki, MJ Brown, P. Charoen, F. Cucca, D. Das, EJ de Geus, AL Dixon, A. Döring, G. Ehret, GI Eyjolfsson, M. Farrall, NG Forouhi, N. Friedrich, W. Goessling, DF Gudbjartsson, TB Harris, AL Hartikainen, S. Heath, GM Hirschfield, A. Hofman, G. Homuth, E. Hyppönen, HL Janssen, T. Johnson, AJ Kangas, IP Kema, JP Kühn, S. Lai, M. Lathrop, MM Lerch, Y. Li, TJ Liang, JP Lin, RJ Loos, NG Martin, MF Moffatt, GW Montgomery, PB Munroe, K. Musunuru, Y. Nakamura, CJ O'Donnell, I. Olafsson, BW Penninx, A. Pouta, BP Prins, I. Prokopenko, R. Puls, A. Ruokonen, MJ Savolainen, D. Schlessinger, JN Schouten, U. Seedorf, S. Sen-Chowdhry, KA Siminovitch, JH Smit, TD Spector, W. Tan, TM Teslovich, T. Tukiainen, AG Uitterlinden, MM Van der Klauw, RS Vasan, C. Wallace, H. Wallaschofski, HE Wichmann, G. Willemsen, P. Würtz, C. Xu, LM Yerges-Armstrong, Alcohol Genome-wide Association (AlcGen) Consortium, Diabetes Genetics Replication and Meta-analyses (DIAGRAM+) Study, Genetic Investigation of Anthropometric Traits (GIANT) Consortium, Global Lipids Genetics Consortium, Genetics of Liver Disease (GOLD) Consortium, International Consortium for Blood Pressure (ICBP-GWAS), Meta-analyses of Glucose and Insulin-Related Traits Consortium (MAGIC), GR Abecasis, KR Ahmadi, DI Boomsma, M. Caulfield, WO Cookson, CM van Duijn, P. Froguel, K. Matsuda, MI McCarthy, C. Meisinger, V. Mooser, KH Pietiläinen, G. Schumann, H. Snieder, MJ Sternberg, RP Stolk, HC Thomas, U. Thorsteinsdottir, M. Uda, G. Waeber, NJ Wareham, DM Waterworth, H. Watkins, JB Whitfield, JC Witteman, BH Wolffenbuttel, CS Fox, M. Ala-Korpela, K. Stefansson, P. Vollenweider, H. Völzke, EE Schadt, J. Scott, MR Järvelin, P. Elliott, and JS Kooner, Genome-wide association study identifies loci influencing concentrations of liver enzymes in plasma. Nat Genet, 2011. 43(11):1131-8.

190. Haiman, CA, GK Chen, CM Vachon, F. Canzian, A. Dunning, RC Millikan, X. Wang, F. Ademuyiwa, S. Ahmed, CB Ambrosone, L. Baglietto, R. Balleine, EV Bandera, MW Beckmann, CD Berg, L. Bernstein, C. Blomqvist, WJ Blot, H. Brauch, JE Buring, LA Carey, JE Carpenter, J. Chang-Claude, SJ Chanock, DI Chasman, CL Clarke, A. Cox, SS Cross, SL Deming, RB Diasio, AM Dimopoulos, WR Driver, T. Dünnebier, L. Durcan, D. Eccles, CK Edlund, AB Ekici, PA Fasching, HS Feigelson, D. Flesch-Janys, F. Fostira, A. Försti, G. Fountzilas, SM Gerty, GENICA Consortium, GG Giles, AK Godwin, P. Goodfellow, N. Graham, D. Greco, U. Hamann, SE Hankinson, A. Hartmann, R. Hein, J. Heinz, A. Holbrook, RN Hoover, JJ Hu, DJ Hunter, SA Ingles, A. Irwanto, J. Ivanovich, EM John, N. Johnson, A. Jukkola-Vuorinen, R. Kaaks, YD Ko, LN Kolonel, I. Konstantopoulou, VM Kosma, S. Kulkarni, D. Lambrechts, AM Lee, L. Le Marchand, T. Lesnick, J. Liu, S. Lindstrom, A. Mannermaa, S. Margolin, NG Martin, P. Miron, GW Montgomery, H. Nevanlinna, S. Nickels, S. Nyante, C. Olswold, J. Palmer, H. Pathak, D. Pectasides, CM Perou, J. Peto, PD Pharoah, LC Pooler, MF Press, K. Pylkäs, TR Rebbeck, JL Rodriguez-Gil, L. Rosenberg, E. Ross, T. Rüdiger, ID Silva, E. Sawyer, MK Schmidt, R. Schulz-Wendtland, F. Schumacher, G. Severi, X. Sheng, LB Signorello, HP Sinn, KN Stevens, MC Southey, WJ Tapper, I. Tomlinson, FB Hogervorst, E. Wauters, J. Weaver, H. Wildiers, R. Winqvist, DV Berg, P. Wan, LY Xia, D. Yannoukakos, W. Zheng, RG Ziegler, A. Siddiq, SL Slager, DO Stram, D. Easton, P. Kraft, BE Henderson, and FJ Couch, A common variant at the TERT-CLPTM1L locus is associated with estrogen receptor-negative breast cancer. Nat Genet, 2011. 43(12):1210-1214.

191. Mondul AM, K. Yu, W. Wheeler, H. Zhang, SJ Weinstein, JM Major, MC Cornelis, S. Männistö, A. Hazra, AW Hsing, KB Jacobs, H. Eliassen, T. Tanaka, DJ Reding, S. Hendrickson, L. Ferrucci, J. Virtamo, DJ Hunter, SJ Chanock, P. Kraft, and D. Albanes, Genome-wide association study of circulating retinol levels. Hum Mol Genet, 2011. 20(23):4724-31.

192. Cox DG, L. Dostal, DJ Hunter, L. Le Marchand, R. Hoover, RG Ziegler, MJ Thun; for the Breast and Prostate Cancer Cohort Consortium, N-Acetyltransferase 2 Polymorphisms, Tobacco Smoking, and Breast Cancer Risk in the Breast and Prostate Cancer Cohort Consortium. Am J Epidemiol, 2011. 174(11):1316-1322.

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193. Gu F., P. Kraft, M. Rice, and KB Michels, Leptin and leptin receptor genes in relation to premenopausal breast cancer incidence and grade in Caucasian women. Breast Cancer Res Treat, 2012. 131(1):17-25.

194. Cornelis MC, EJ Tchetgen Tchetgen, L. Liang, L. Qi, N. Chatterjee, FB Hu, and P. Kraft, Gene-environment interactions in genome-wide association studies: A comparative study of tests applied to empirical studies of type 2 diabetes. Am J Epidemiol, 2012 Feb 1;175(3):191-202

195. Lindström S., FR Schumacher, D. Campa, D. Albanes, G. Andriole, SI Berndt, HB Bueno-de-Mesquita, SJ Chanock, WR Diver, JM Ganziano, SM Gapstur, E. Giovannucci, CA Haiman, B. Henderson, DJ Hunter, M. Johansson, LN Kolonel, L. Le Marchand, J. Ma, M. Stampfer, VL Stevens, D. Trichopoulos, J. Virtamo, WC Willett, M. Yeager, AW Hsing, and P. Kraft, Replication of Five Prostate Cancer Loci Identified in an Asian Population--Results from the NCI Breast and Prostate Cancer Cohort Consortium (BPC3). Cancer Epidemiol Biomarkers Prev, 2012. 21(1): 212-216.

196. Wolpin BM, K. Ng, Y. Bao, P. Kraft, MJ Stampfer, DS Michaud, J. Ma, JE Buring, HD Sesso, IM Lee, N. Rifai, BB Cochrane, J. Wactawski-Wende, RT Chlebowski, WC Willett, JE Manson, EL Giovannucci, and CS Fuchs, Plasma 25-hydroxyvitamin D and risk of pancreatic cancer. Cancer Epidemiol Biomarkers Prev, 2012. 21(1):82-91.

197. Shui, I.M., J.R. Stark, K.L. Penney, F.R. Schumacher, M.M. Epstein, M.J. Pitt, M.J. Stampfer, R.M. Tamimi, S. Lindstrom, H.D. Sesso, K. Fall, J. Ma, P. Kraft, E. Giovannucci, and L.A. Mucci, Genetic variation in the toll-like receptor 4 and prostate cancer incidence and mortality. Prostate, 2012. 72(2):209-216.

198. Peters, U., C.M. Hutter, L. Hsu, F.R. Schumacher, D.V. Conti, C.S. Carlson, C.K. Edlund, R.W. Haile, S. Gallinger, B.W. Zanke, M. Lemire, J. Rangrej, R. Vijayaraghavan, A.T. Chan, A. Hazra, D.J. Hunter, J. Ma, C.S. Fuchs, E.L. Giovannucci, P. Kraft, Y. Liu, L. Chen, S. Jiao, K.W. Makar, D. Taverna, S.B. Gruber, G. Rennert, V. Moreno, C.M. Ulrich, M.O. Woods, R.C. Green, P.S. Parfrey, R.L. Prentice, C. Kooperberg, R.D. Jackson, A.Z. Lacroix, B.J. Caan, R.B. Hayes, S.I. Berndt, S.J. Chanock, R.E. Schoen, J. Chang-Claude, M. Hoffmeister, H. Brenner, B. Frank, S. Bezieau, S. Kury, M.L. Slattery, J.L. Hopper, M.A. Jenkins, L. Le Marchand, N.M. Lindor, P.A. Newcomb, D. Seminara, T.J. Hudson, D.J. Duggan, J.D. Potter, and G. Casey, Meta-analysis of new genome-wide association studies of colorectal cancer risk. Hum Genet, 2012. 131(2):217-234.

199. Shu, XO, J. Long, W. Lu, C. Li, WY Chen, R. Delahanty, J. Cheng, H. Cai, Y. Zheng, J. Shi, K. Gu, WJ Wang, P. Kraft, YT Gao, Q. Cai, and W. Zheng, Novel Genetic Markers of Breast Cancer Survival Identified by a Genome-Wide Association Study. Cancer Res, 2012. 72(5):1182-1189.

200. Lindström, S., F. Schumacher, DG Cox, RC Travis, D. Albanes, NE Allen, GL Andriole, SI Berndt, H. Boeing, HB Bueno-de-Mesquita, D. Crawford, WR Diver, JM Gaziano, GG Giles, EL Giovannucci, C. Gonzales, B. Henderson, DJ Hunter, M. Johansson , LN Kolonel, J. Ma, L. Le Marchand, V. Pala, MJ Stampfer, DO Stram, M. Thun, A. Tjonneland, D. Trichopoulos, J. Virtamo, SJ Weinstein, WC Willett, M. Yeager, RB Hayes, G. Severi, C. Haiman, SJ Chanock, and P. Kraft , Common genetic variants in prostate cancer risk prediction - Results from the NCI Breast and Prostate Cancer Cohort Consortium (BPC3). Cancer Epidemiol Biomarkers Prev, 2012. 21(3):437-444.

201. Lee, P., Y.P. Fu, J.D. Figueroa, L. Prokunina-Olsson, J. Gonzalez-Bosquet, P. Kraft, Z. Wang, K.B. Jacobs, M. Yeager, M.J. Horner, S.E. Hankinson, A. Hutchinson, N. Chatterjee, M. Garcia-Closas, R.G. Ziegler, C.D. Berg, S.S. Buys, C.A. McCarty, H.S. Feigelson, M.J. Thun, R. Diver, R. Prentice, R. Jackson, C. Kooperberg, R. Chlebowski, J. Lissowska, B. Peplonska, L.A. Brinton, M. Tucker, J.F. Fraumeni, Jr., R.N. Hoover, G. Thomas, D.J. Hunter, and S.J. Chanock, Fine mapping of 14q24.1 breast cancer susceptibility locus. Hum Genet, 2012. 131(3):479-490

202. Zhang, M., L. Liang, N. Morar, AL Dixon, GM Lathrop, J. Ding, MF Moffatt, WO Cookson, P.Kraft, AA Qureshi, and J. Han, Integrating pathway analysis and genetics of gene expression for genome-wide association study of basal cell carcinoma. Hum Genet, 2012. 131(4):615-623.

203. Monsees, GM, P. Kraft, SE Hankinson, DJ Hunter, and ES Schernhammer, Circadian genes and breast cancer susceptibility in rotating shift workers. Int J Cancer, 2012. 131(11):2547-2552.

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204. Palmer, ND, CW McDonough, PJ Hicks, BH Roh, MR Wing, SS An, JM Hester, JN Cooke, MA Bostrom, ME Rudock, ME Talbert, JP Lewis; DIAGRAM Consortium; MAGIC Investigators, A. Ferrara, L. Lu, JT Ziegler, MM Sale, J. Divers, D. Shriner, A. Adeyemo, CN Rotimi, MC Ng, CD Langefeld, BI Freedman, DW Bowden, BF Voight, LJ Scott, V. Steinthorsdottir, AP Morris, C. Dina, RP Welch, E. Zeggini, C. Huth, YS Aulchenko, G. Thorleifsson, LJ McCulloch, T. Ferreira, H. Grallert, N. Amin, G. Wu, CJ Willer, S. Raychaudhuri, SA McCarroll, C. Langenberg, OM Hofmann, J. Dupuis, L. Qi, AV Segrè, M. van Hoek, P. Navarro, K. Ardlie, B. Balkau, R. Benediktsson, AJ Bennett, R. Blagieva, E. Boerwinkle, LL Bonnycastle, KB Boström, B. Bravenboer, S. Bumpstead, NP Burtt, G. Charpentier, PS Chines, M. Cornelis, DJ Couper, G. Crawford, AS Doney, KS Elliott, AL Elliott, MR Erdos, CS Fox, CS Franklin, M. Ganser, C. Gieger, N. Grarup, T. Green, S. Griffin, CJ Groves, C. Guiducci, S. Hadjadj, N. Hassanali, C. Herder, B. Isomaa, AU Jackson, PR Johnson, T. Jørgensen, WH Kao, N. Klopp, A. Kong, P. Kraft, J. Kuusisto, T. Lauritzen, M. Li, A. Lieverse, CM Lindgren, V. Lyssenko, M. Marre, T. Meitinger, K. Midthjell,MA Morken, N. Narisu, P. Nilsson, KR Owen, F. Payne, JR Perry, AK Petersen, C. Platou, C. Proença, I. Prokopenko, W. Rathmann, NW Rayner, NR Robertson, G. Rocheleau, M. Roden, MJ Sampson, R. Saxena, BM Shields, P. Shrader, G. Sigurdsson, T. Sparsø, K. Strassburger, HM Stringham, Q. Sun, AJ Swift, B. Thorand, J. Tichet, T. Tuomi, RM van Dam, TW van Haeften, T. van Herpt, JV van Vliet-Ostaptchouk, GB Walters, MN Weedon, C. Wijmenga, J. Witteman, RN Bergman, S. Cauchi, FS Collins, AL Gloyn, U. Gyllensten, T. Hansen, WA Hide, GA Hitman, A. Hofman, DJ Hunter, K. Hveem, M. Laakso, KL Mohlke, AD Morris, CN Palmer, PP Pramstaller, I. Rudan, E. Sijbrands, LD Stein, J. Tuomilehto, A. Uitterlinden, M. Walker, NJ Wareham, RM Watanabe, GR Abecasis, BO Boehm, H. Campbell, MJ Daly, AT Hattersley, FB Hu, JB Meigs, JS Pankow, O. Pedersen, HE Wichmann, I. Barroso, JC Florez, TM Frayling, L. Groop, R. Sladek, U. Thorsteinsdottir, JF Wilson, T. Illig, P. Froguel, CM van Duijn, K. Stefansson, D. Altshuler, M. Boehnke, MI McCarthy, N. Soranzo, E. Wheeler, NL Glazer, N. Bouatia-Naji, R. Mägi, J. Randall, T. Johnson, P. Elliott, D. Rybin, P. Henneman, A. Dehghan, JJ Hottenga, K. Song, A. Goel, JM Egan, T. Lajunen, A. Doney, S. Kanoni, C. Cavalcanti-Proença, M. Kumari, NJ Timpson, C. Zabena, E. Ingelsson, P. An, J. O'Connell, J. Luan, A. Elliott, SA McCarroll, RM Roccasecca, F. Pattou, P. Sethupathy, Y. Ariyurek, P. Barter, JP Beilby, Y. Ben-Shlomo, S. Bergmann, M. Bochud, A. Bonnefond, K. Borch-Johnsen, Y. Böttcher, E. Brunner, SJ Bumpstead , YD Chen, P. Chines, R. Clarke, LJ Coin, MN Cooper, L. Crisponi, IN Day, EJ de Geus, J. Delplanque, AC Fedson, A. Fischer-Rosinsky, NG Forouhi, R. Frants, MG Franzosi, P. Galan, MO Goodarzi, J. Graessler, S. Grundy, R. Gwilliam, G. Hallmans, N. Hammond, X. Han, AL Hartikainen, C. Hayward, SC Heath, S. Hercberg, AA Hicks, DR Hillman, AD Hingorani, J. Hui, J. Hung, A. Jula, M. Kaakinen, J. Kaprio, YA Kesaniemi, M. Kivimaki, B. Knight, S. Koskinen, P. Kovacs, KO Kyvik, GM Lathrop, DA Lawlor, O. Le Bacquer, C. Lecoeur, Y. Li, R. Mahley, M. Mangino, AK Manning, MT Martínez-Larrad, JB McAteer, R. McPherson, C. Meisinger, D. Melzer, D. Meyre, BD Mitchell, S. Mukherjee, S. Naitza, MJ Neville, BA Oostra, M. Orrù, R. Pakyz, G. Paolisso, C. Pattaro, D. Pearson, JF Peden, NL Pedersen, M. Perola, AF Pfeiffer, I. Pichler, O. Polasek, D. Posthuma , SC Potter, A. Pouta, MA Province, BM Psaty, NW Rayner, K. Rice, S. Ripatti, F. Rivadeneira, O. Rolandsson, A. Sandbaek, M. Sandhu, S. Sanna, AA Sayer, P. Scheet, U. Seedorf, SJ Sharp, B. Shields, EJ Sijbrands, A. Silveira, L. Simpson, A. Singleton, NL Smith, U. Sovio, A. Swift, H. Syddall, AC Syvänen, T. Tanaka, A. Tönjes, AG Uitterlinden, KW van Dijk, D. Varma, S. Visvikis-Siest, V. Vitart, N. Vogelzangs, G. Waeber, PJ Wagner, A. Walley, KL Ward, H. Watkins, SH Wild, G. Willemsen, JC Witteman, JW Yarnell, D. Zelenika, B. Zethelius, G. Zhai, JH Zhao, MC Zillikens, IB Borecki, RJ Loos, P. Meneton, PK Magnusson, DM Nathan, GH Williams, K. Silander, V. Salomaa, GD Smith, SR Bornstein, P. Schwarz, J. Spranger, F. Karpe, AR Shuldiner, C. Cooper, GV Dedoussis, M. Serrano-Ríos, L. Lind, LJ Palmer, PW Franks, S. Ebrahim, M. Marmot, WH Kao, PP Pramstaller, AF Wright, M. Stumvoll, A. Hamsten, TA Buchanan, TT Valle, JI Rotter, DS Siscovick, BW Penninx, DI Boomsma, P. Deloukas, TD Spector, L. Ferrucci, A. Cao, A. Scuteri, D. Schlessinger, M. Uda, A. Ruokonen, MR Jarvelin, DM Waterworth, P. Vollenweider, L.

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Peltonen, V. Mooser, and R. Sladek, A genome-wide association search for type 2 diabetes genes in African Americans. PLoS One,2012;7(1):e29202.

205. Stolk, L., JR Perry, DI Chasman, C. He, M. Mangino, P. Sulem, M. Barbalic, L. Broer, EM Byrne, F. Ernst, T. Esko, N. Franceschini, DF Gudbjartsson, JJ Hottenga, P. Kraft, PF McArdle, E. Porcu, SY Shin, AV Smith, S. van Wingerden, G. Zhai, WV Zhuang, E. Albrecht, BZ Alizadeh, T. Aspelund, S. Bandinelli, LB Lauc, JS Beckmann, M. Boban, E. Boerwinkle, FJ Broekmans, A. Burri, H. Campbell, SJ Chanock, C. Chen, MC Cornelis, T. Corre,AD Coviello, P. d'Adamo, G. Davies, U. de Faire, EJ de Geus, IJ Deary, GV Dedoussis, P. Deloukas, S. Ebrahim, G. Eiriksdottir, V. Emilsson, JG Eriksson, BC Fauser, L. Ferreli, L. Ferrucci, K. Fischer, AR Folsom, ME Garcia, P. Gasparini, C. Gieger, N. Glazer, DE Grobbee, P. Hall, T. Haller, SE Hankinson, M. Hass, C. Hayward, AC Heath, A. Hofman, E. Ingelsson, AC Janssens, AD Johnson, D. Karasik, SL Kardia, J. Keyzer, DP Kiel, I. Kolcic, Z. Kutalik, J. Lahti, S. Lai, T. Laisk, JS Laven , DA Lawlor, J. Liu, LM Lopez, YV Louwers, PK Magnusson , M. Marongiu, NG Martin, IM Klaric, C. Masciullo, B. McKnight, SE Medland , D. Melzer, V. Mooser, P. Navarro, AB Newman , DR Nyholt, NC Onland-Moret, A. Palotie, G. Paré, AN Parker, NL Pedersen, PH Peeters, G. Pistis, AS Plump, O. Polasek, VJ Pop, BM Psaty, K. Räikkönen, E. Rehnberg, JI Rotter, I. Rudan, C. Sala, A. Salumets, A. Scuteri, A. Singleton, JA Smith, H. Snieder, N. Soranzo , SN Stacey, JM Starr, MG Stathopoulou, K. Stirrups, RP Stolk, U. Styrkarsdottir, YV Sun, A. Tenesa, B. Thorand, D. Toniolo, L. Tryggvadottir, K. Tsui, S. Ulivi, RM van Dam, YT van der Schouw, CH van Gils, P. van Nierop, JM Vink, PM Visscher, M. Voorhuis, G. Waeber, H. Wallaschofski, HE Wichmann, E. Widen, CJ Wijnands-van Gent, G. Willemsen, JF Wilson, BH Wolffenbuttel, AF Wright, LM Yerges-Armstrong, T. Zemunik, L. Zgaga, MC Zillikens, M. Zygmunt, TL Study, AM Arnold, DI Boomsma, JE Buring, L. Crisponi, EW Demerath, V. Gudnason, TB Harris, FB Hu, DJ Hunter, LJ Launer, A. Metspalu, GW Montgomery, BA Oostra, PM Ridker, S. Sanna, D. Schlessinger, TD Spector, K. Stefansson, EA Streeten, U. Thorsteinsdottir, M. Uda, AG Uitterlinden, CM van Duijn, H. Völzke, A. Murray, JM Murabito, JA Visser, and KL Lunetta, Meta-analyses identify 13 loci associated with age at menopause and highlight DNA repair and immune pathways. Nat Genet. 2012 Jan 22;44(3):260-8.

206. Du, M., J. Prescott, P. Kraft, J. Han, E. Giovannucci, SE Hankinson, and I. De Vivo, Physical activity, sedentary behavior, and leukocyte telomere length in women. Am J Epidemiol. 2012 Mar 1;175(5):414-22.

207. Hutter, CM, J. Chang-Claude, ML Slattery, BM Pflugeisen, Y. Lin, D. Duggan, H. Nan, M. Lemire, J. Rangrej, JC Figueiredo, S. Jiao, TA Harrison, Y. Liu, LS Chen, DL Stelling, GS Warnick, M. Hoffmeister, S. Küry, CS Fuchs, E. Giovannucci, A. Hazra, P. Kraft, DJ Hunter, S. Gallinger, BW Zanke, H. Brenner, B. Frank, J. Ma, CM Ulrich, E. White, PA Newcomb, C. Kooperberg, AZ Lacroix, RL Prentice, RD Jackson, RE Schoen, SJ Chanock, SI Berndt, RB Hayes, BJ Caan, JD Potter, L. Hsu, S. Bezieau, AT Chan, TJ Hudson, and U. Peters, Characterization of gene-environment interactions for colorectal cancer susceptibility loci. Cancer Res, 2012. 72(8):2036-44.

208. Hartz, SM, S Short, NL Saccone, R Culverhouse, LS Chen, T Schwantes-An, H Coon, Y Han, SH Stephens, J Sun, X Chen, F Ducci, N Dueker, N Franceschini, J Frank, F Geller, D Guðbjartsson, N Hansel, C Jiang, K Keskitalo-Vuokko, J Liu, L Lyytikäinen, M Michel, R Rawal, A Rosenberger, P Scheet, JR Shaffer, A Teumer, JR Thompson, JM Vink, N Vogelzangs, A Wenzlaff, W Wheeler, X Xiangjun , BZ Yang, SH Aggen, A Balmforth, S Baumeister, T Beaty, S Bennett, A Bergen, H Boyd, U Broms, H Campbell, N Chatterjee, J Chen, YC Cheng, S Cichon, D Couper, F Cucca, D Dick, T Foroud, H Furberg, I Giegling, F Gu, A S Hall, J Hällfors, S Han, AM Hartmann, C Hayward, K Heikkilä, JK Hewitt, JJ Hottenga, M Jensen, P Jousilahti, M Kaakinen, S Kittner, B Konte, T Korhonen, MT Landi, T Laatikainen, M Leppert, SM Levy, R Mathias, DW McNeil, S Medland, G Montgomery, T Muley, T Murray, M Nauck, K North, M Pergadia, O Polasek, E Ramos, S Ripatti, A Risch, I Ruczinski, I Rudan, V Salomaa, D Schlessinger, U Styrkársdóttir, A Terracciano, M Uda, G Willemsen, X Wu, G Abecasis, K Barnes, H Bickeböller, E Boerwinkle, DI Boomsma, N Caporaso, J Duan, HJ Edenberg, C Francks, PV Gejman, J Gelernter, HJ Grabe, H Hops, MR Jarvelin, V Jorma, M Kähönen, KS Kendler, T Lehtimäki, DF Levinson, ML Marazita, J Marchini, M Melbye, B Mitchell, JC Murray, MM Nöthen,

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BW Penninx, O Raitakari, M Rietschel, D Rujescu, N J Samani , AR Sanders, A Schwartz, S Shete, J Shi, M Spitz, K Stefansson, G Swan, T Thorgeirsson, H Völzke, Q Wei, HE Wichmann, C Amos, N Breslau, D Cannon, M Ehringer, R Grucza, D Hatsukami, A Heath, E Johnson, J Kaprio, P Madden, NG Martin, V Stevens, JA Stitzel, RB Weiss, P Kraft, and LJ Bierut, Increased genetic vulnerability to smoking at CHRNA5 in early-onset smokers, Archives of General Psychiatry (in press).

209. Shui, IM, LA Mucci, P. Kraft, S. Lindstrom, KL Penney, K. Nimptsch, R. Tamimi, E. Platz, MJ Stampfer, and E. Giovannucci, Vitamin D related genetic variation, plasma vitamin D, and risk of lethal prostate cancer:a prospective nested case-control study. J Natl Cancer Inst, 2012. 104(9):690-699.

210. Stahl, EA, D. Wegmann, G. Trynka, J. Gutierrez-Achury, R. Do, BF Voight, P. Kraft, R. Chen, HJ Kallberg, FA Kurreeman, Diabetes Genetics Replication and Meta-analysis Consortium, Myocardial Infarction Genetics Consortium, S. Kathiresan, C. Wijmenga, PK Gregersen, L. Alfredsson, KA Siminovitch, J. Worthington, PIW de Bakker, S. Raychaudhuri, and RM Plenge, Bayesian inference analyses of the polygenic architecture of rheumatoid arthritis. Nat Genet, 2012. 44(5):483-489.

211. Machiela, MJ, S. Lindström, N. Allen, CA Haiman , D. Albanes, A. Barricarte, S. Berndt, HB Bueno-de-Mesquita, S. Chanock, WR Diver, S. Gapstur, B. Henderson, E. Jacobs, L. Kolonel, V. Krogh, V. Stevens, A. Tjonneland, M. Thun, R. Travis, DJ Hunter, L. LeMarchand, and P. Kraft, Association of Type 2 Diabetes Susceptibility Variants with Advanced Prostate Cancer Risk in the Breast and Prostate Cancer Cohort Consortium. Am J Epidemiol, 2012. 176(12):1121-1129.

212. Aschard, H., J. Chen, M. Cornelis, LB Chibnik, E. Karlson, and P. Kraft, Inclusion of gene-gene and gene-environment interactions unlikely to dramatically improve risk prediction forcomplex diseases. Am J Hum Genet, 2012. 90(6):962-972.

213. Gates, M.A., M. Xu, W.Y. Chen, P. Kraft, S.E. Hankinson, and B.M. Wolpin, ABO blood group and breast cancer incidence and survival. Int J Cancer, 2012. 130(9):2129-2137.

214. Tsilidis, KK, RC Travis, PN Appleby, NE Allen, S. Lindstrom, FR Schumacher, D. Cox, AW Hsing, J. Ma, G. Severi, D. Albanes, J. Virtamo, H. Boeing, HB Bueno-de-Mesquita, M. Johansson, JR Quirós, E. Riboli, A. Siddiq, A. Tjønneland, D. Trichopoulos, R. Tumino, JM Gaziano, E. Giovannucci, DJ Hunter, P. Kraft, MJ Stampfer, GG Giles, GL Andriole, SI Berndt, SJ Chanock, RB Hayes, and TJ Key, Interactions between genome-wide significant genetic variants and circulating concentrations of insulin-like growth factor 1, sex hormones, and binding proteins in relation to prostate cancer risk in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium. Am J Epidemiol, 2012. 175(9):926-935.

215. Jacobs, KB, M. Yeager, W. Zhou, S. Wacholder, Z. Wang, B. Rodriguez-Santiago, A. Hutchinson, X. Deng, C. Liu, MJ Horner, M. Cullen, CG Epstein, L. Burdett, MC Dean, N. Chatterjee, J. Sampson, CC Chung, J. Kovaks, SM Gapstur, VL Stevens, LT Teras, MM Gaudet, D. Albanes, SJ Weinstein, J. Virtamo, PR Taylor, ND Freedman, CC Abnet, AM Goldstein, N. Hu, K. Yu, JM Yuan, L. Liao, T. Ding, YL Qiao, YT Gao, WP Koh, YB Xiang, ZZ Tang, JH Fan, MC Aldrich, C. Amos, WJ Blot, CH Bock, EM Gillanders, CC Harris, CA Haiman, BE Henderson, LN Kolonel, L. Le Marchand, LH McNeill, BA Rybicki, AG Schwartz, LB Signorello, MR Spitz, JK Wiencke, M. Wrensch, X. Wu, KA Zanetti, RG Ziegler, JD Figueroa, M. Garcia-Closas, N. Malats, G. Marenne, L. Prokunina-Olsson, D. Baris, M. Schwenn, A. Johnson, MT Landi, L. Goldin, D. Consonni, PA Bertazzi, M. Rotunno, P. Rajaraman, U. Andersson, LE Freeman, CD Berg, JE Buring, MA Butler, T. Carreon, M. Feychting, A. Ahlbom, JM Gaziano, GG Giles, G. Hallmans, SE Hankinson, P. Hartge, R. Henriksson, PD Inskip, C. Johansen, A. Landgren, R. McKean-Cowdin, DS Michaud, BS Melin, U. Peters, AM Ruder, HD Sesso, G. Severi, XO Shu, K. Visvanathan, E. White, A. Wolk, A. Zeleniuch-Jacquotte, W. Zheng, DT Silverman, M. Kogevinas, JR Gonzalez, O. Villa, D. Li, EJ Duell, HA Risch, SH Olson, C. Kooperberg, BM Wolpin, L. Jiao, M. Hassan, W. Wheeler, AA Arslan, HB Bueno-de-Mesquita, CS Fuchs, S. Gallinger, MD Gross, EA Holly, AP Klein, A. Lacroix, MT Mandelson, G. Petersen, MC Boutron-Ruault, PM Bracci, F. Canzian, K. Chang, M. Cotterchio, EL Giovannucci, M. Goggins, JA Bolton, M. Jenab, KT Khaw, V. Krogh, RC Kurtz, RR McWilliams, JB Mendelsohn, KG Rabe, E. Riboli, A. Tjønneland, GS Tobias, D. Trichopoulos, JW Elena, H. Yu, L. Amundadottir, RZ Stolzenberg-Solomon,

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P. Kraft, F. Schumacher, D. Stram, SA Savage, L. Mirabello, IL Andrulis, JS Wunder, AP García, L. Sierrasesúmaga, DA Barkauskas, RG Gorlick, M. Purdue, WH Chow, LE Moore, KL Schwartz, FG Davis, AW Hsing, SI Berndt, A. Black, N. Wentzensen, LA Brinton, J. Lissowska, B. Peplonska, KA McGlynn, MB Cook, BI Graubard, CP Kratz, MH Greene, RL Erickson, DJ Hunter, G. Thomas, RN Hoover, FX Real, JF Fraumeni Jr, NE Caporaso, M. Tucker, N. Rothman, LA Pérez-Jurado, and SJ Chanock, Detectable clonal mosaicism and its relationship to aging and cancer. Nat Genet, 2012. 44(6):651-658.

216. Zaitlen, N., B. Pasaniuc, N. Patterson, S. Pollack, B. Voight, L. Groop, D. Altshuler, BE Henderson, LN Kolonel, LL Marchand, K. Waters, CA Haiman, BE Stranger, ET Dermitzakis, P. Kraft, and AL Price, Analysis of case-control association studies with known risk variants. Bioinformatics, 2012. 28(13):1729-1737.

217. Pierce, BL, L. Tong, P. Kraft, and H. Ahsan, Unidentified Genetic Variants Influence Pancreatic Cancer Risk: An Analysis of Polygenic Susceptibility in the PanScan Study. Genet Epidemiol, 2012. 36(5):517-524.

218. Dastani, Z., MF Hivert, N. Timpson, JR Perry, X. Yuan, RA Scott, P. Henneman, IM Heid, JR Kizer, LP Lyytikäinen, C. Fuchsberger, T. Tanaka, AP Morris, K. Small, A. Isaacs, M. Beekman, S. Coassin, K. Lohman, L. Qi, S. Kanoni, JS Pankow, HW Uh, Y. Wu, A. Bidulescu, LJ Rasmussen-Torvik, CM Greenwood, M. Ladouceur, J. Grimsby,AK Manning, CT Liu, J. Kooner, VE Mooser, P. Vollenweider, KA Kapur, J. Chambers, NJ Wareham, C. Langenberg, R. Frants, K. Willems-Vandijk, BA Oostra, SM Willems, C. Lamina, TW Winkler, BM Psaty, RP Tracy, J. Brody, I. Chen, J. Viikari, M. Kähönen, PP Pramstaller, DM Evans, B. St Pourcain, N. Sattar, AR Wood, S. Bandinelli, OD Carlson, JM Egan, S. Böhringer, D. van Heemst, L. Kedenko, K. Kristiansson, ML Nuotio, BM Loo, T. Harris, M. Garcia, A. Kanaya, M. Haun, N. Klopp, HE Wichmann, P. Deloukas, E. Katsareli, DJ Couper, BB Duncan, M. Kloppenburg, LS Adair, JB Borja; DIAGRAM+ Consortium; MAGIC Consortium; GLGC Investigators; MuTHER Consortium, JG Wilson, S. Musani, X. Guo, T. Johnson, R. Semple, TM Teslovich, MA Allison, S. Redline, SG Buxbaum, KL Mohlke, I. Meulenbelt, CM Ballantyne, GV Dedoussis, FB Hu, Y. Liu, B. Paulweber, TD Spector, PE Slagboom, L. Ferrucci, A. Jula, M. Perola, O. Raitakari, JC Florez, V. Salomaa, JG Eriksson, TM Frayling, AA Hicks, T. Lehtimäki, GD Smith, DS Siscovick, F. Kronenberg, C. van Duijn, RJ Loos, DM Waterworth, JB Meigs, J. Dupuis, JB Richards, BF Voight, LJ Scott, V. Steinthorsdottir, C. Dina, RP Welch, E. Zeggini, C. Huth, YS Aulchenko, G. Thorleifsson, LJ McCulloch, T. Ferreira, H. Grallert, N. Amin, G. Wu, CJ Willer, S. Raychaudhuri, SA McCarroll, OM Hofmann, AV Segrè, M. van Hoek, P. Navarro, K. Ardlie, B. Balkau, R. Benediktsson, AJ Bennett, R. Blagieva, E. Boerwinkle, LL Bonnycastle, KB Boström, B. Bravenboer, S. Bumpstead, NP Burtt, G. Charpentier, PS Chines, M. Cornelis, G. Crawford, AS Doney, KS Elliott, AL Elliott, MR Erdos, CS Fox, CS Franklin, M. Ganser, C. Gieger, N. Grarup, T. Green, S. Griffin, CJ Groves, C. Guiducci, S. Hadjadj, N. Hassanali, C. Herder, B. Isomaa, AU Jackson, PR Johnson, T. Jørgensen, WH Kao, A. Kong, P. Kraft, J. Kuusisto, T. Lauritzen, M. Li, A. Lieverse, CM Lindgren, V. Lyssenko, M. Marre, T. Meitinger, K. Midthjell, MA Morken, N. Narisu, P. Nilsson, KR Owen, F. Payne, AK Petersen, C. Platou, C. Proença, I. Prokopenko, W. Rathmann, NW Rayner, NR Robertson, G. Rocheleau, M. Roden, MJ Sampson, R. Saxena, BM Shields, P. Shrader, G. Sigurdsson, T. Sparsø, K. Strassburger, HM Stringham, Q. Sun, AJ Swift, B. Thorand, J. Tichet, T. Tuomi, RM van Dam, TW van Haeften, T. van Herpt, JV van Vliet-Ostaptchouk, GB Walters, MN Weedon, C. Wijmenga, J. Witteman, RN Bergman, S. Cauchi, FS Collins, AL Gloyn, U. Gyllensten, T. Hansen, WA Hide, GA Hitman, A. Hofman, DJ Hunter, K. Hveem, M. Laakso, AD Morris, CN Palmer, I. Rudan, E. Sijbrands, LD Stein, J. Tuomilehto, A. Uitterlinden, M. Walker, RM Watanabe, GR Abecasis, BO Boehm, H. Campbell, MJ Daly, AT Hattersley, O. Pedersen, I. Barroso, L. Groop, R. Sladek, U. Thorsteinsdottir, JF Wilson, T. Illig, P. Froguel, CM van Duijn, K. Stefansson, D. Altshuler, M. Boehnke, MI McCarthy, N. Soranzo, E. Wheeler, NL Glazer, N. Bouatia-Naji, R. Mägi, J. Randall, P. Elliott, D. Rybin, A. Dehghan, JJ Hottenga, K. Song, A. Goel, T. Lajunen, A. Doney, C. Cavalcanti-Proença, M. Kumari, NJ Timpson, C. Zabena, E. Ingelsson, P. An, J. O'Connell, J. Luan, A. Elliott, SA McCarroll, RM Roccasecca, F.

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Pattou, P. Sethupathy, Y. Ariyurek, P. Barter, JP Beilby, Y. Ben-Shlomo, S. Bergmann, M. Bochud, A. Bonnefond, K. Borch-Johnsen, Y. Böttcher, E. Brunner, SJ Bumpstead, YD Chen, P. Chines, R. Clarke, LJ Coin, MN Cooper, L. Crisponi, IN Day, EJ de Geus, J. Delplanque, AC Fedson, A. Fischer-Rosinsky, NG Forouhi, MG Franzosi, P. Galan, MO Goodarzi, J. Graessler, S. Grundy, R. Gwilliam, G. Hallmans, N. Hammond, X. Han, AL Hartikainen, C. Hayward, SC Heath, S. Hercberg, DR Hillman, AD Hingorani, J. Hui, J. Hung, M. Kaakinen, J. Kaprio, YA Kesaniemi, M. Kivimaki, B. Knight, S. Koskinen, P. Kovacs, KO Kyvik, GM Lathrop, DA Lawlor, O. Le Bacquer, C. Lecoeur, Y. Li, R. Mahley, M. Mangino, MT Martínez-Larrad, JB McAteer, R. McPherson, C. Meisinger, D. Melzer, D. Meyre, BD Mitchell, S. Mukherjee, S. Naitza, MJ Neville, M. Orrù, R. Pakyz, G. Paolisso, C. Pattaro, D. Pearson, JF Peden, NL Pedersen, AF Pfeiffer, I. Pichler, O. Polasek, D. Posthuma, SC Potter, A. Pouta, MA Province, NW Rayner, K. Rice, S. Ripatti, F. Rivadeneira, O. Rolandsson, A. Sandbaek, M. Sandhu, S. Sanna, AA Sayer, P. Scheet, U. Seedorf, SJ Sharp, B. Shields, G. Sigurðsson, EJ Sijbrands, A. Silveira, L. Simpson, A. Singleton, NL Smith, U. Sovio, A. Swift, H. Syddall, AC Syvänen, A. Tönjes, AG Uitterlinden, KW van Dijk, D. Varma, S. Visvikis-Siest, V. Vitart, N. Vogelzangs, G. Waeber, PJ Wagner, A. Walley, KL Ward, H. Watkins, SH Wild, G. Willemsen, JC Witteman, JW Yarnell, D. Zelenika, B. Zethelius, G. Zhai, JH Zhao, MC Zillikens; DIAGRAM Consortium; GIANT Consortium; Global B Pgen Consortium, IB Borecki, P. Meneton, PK Magnusson, DM Nathan, GH Williams, K. Silander, SR Bornstein, P. Schwarz, J. Spranger, F. Karpe, AR Shuldiner, C. Cooper, M. Serrano-Ríos, L. Lind, LJ Palmer, FB Hu, PW Franks, S. Ebrahim, M. Marmot, WH Kao, PP Pramstaller, AF Wright, M. Stumvoll, A. Hamsten; Procardis Consortium, TA Buchanan, TT Valle, JI Rotter, BW Penninx, DI Boomsma, A. Cao, A. Scuteri, D. Schlessinger, M. Uda, A. Ruokonen, MR Jarvelin, L. Peltonen, V. Mooser, R. Sladek; MAGIC investigators; GLGC Consortium, K. Musunuru, AV Smith, AC Edmondson, IM Stylianou, M. Koseki, JP Pirruccello, DI Chasman, CT Johansen, SW Fouchier, GM Peloso, M. Barbalic, SL Ricketts , JC Bis, MF Feitosa, M. Orho-Melander, O. Melander, X. Li, M. Li, YS Cho, MJ Go, YJ Kim, JY Lee, T. Park, K. Kim, X. Sim, RT Ong, DC Croteau-Chonka, LA Lange, JD Smith, A. Ziegler, W. Zhang, RY Zee, JB Whitfield, JR Thompson, I. Surakka, TD Spector, JH Smit, J. Sinisalo, J. Scott, J. Saharinen, C. Sabatti, LM Rose, R. Roberts, M. Rieder, AN Parker, G. Pare, CJ O'Donnell, MS Nieminen, DA Nickerson, GW Montgomery, W. McArdle, D. Masson, NG Martin, F. Marroni, G. Lucas, R. Luben, ML Lokki, G. Lettre, LJ Launer, EG Lakatta, R. Laaksonen, KO Kyvik, IR König, KT Khaw, LM Kaplan, A. Johansson, AC Janssens, W. Igl, GK Hovingh, C. Hengstenberg, AS Havulinna, ND Hastie, TB Harris, T. Haritunians, AS Hall, LC Groop, E. Gonzalez, NB Freimer, J. Erdmann, KG Ejebe, A. Döring, AF Dominiczak, S. Demissie, P. Deloukas, U. de Faire, G. Crawford, YD Chen, MJ Caulfield, SM Boekholdt, TL Assimes, T. Quertermous, M. Seielstad, TY Wong, ES Tai, AB Feranil, CW Kuzawa, HA Taylor Jr, SB Gabriel, H. Holm, V. Gudnason, RM Krauss, JM Ordovas, PB Munroe, JS Kooner, AR Tall, RA Hegele, JJ Kastelein, EE Schadt, DP Strachan, MP Reilly, NJ Samani, H. Schunkert, LA Cupples, MS Sandhu, PM Ridker, DJ Rader, and S. Kathiresan, Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals. PLoS Genet, 2012. 8(3):e1002607.

219. Li, D., EJ Duell, K. Yu, HA Risch, SH Olson, C. Kooperberg, BM Wolpin, L. Jiao, X. Dong, B. Wheeler, AA Arslan, HB Bueno-de-Mesquita, CS Fuchs, S. Gallinger, M. Gross, P. Hartge, RN Hoover, EA Holly, EJ Jacobs, AP Klein, A. Lacroix, MT Mandelson, G. Petersen, W. Zheng, I. Agalliu, D. Albanes, MC Boutron-Ruault, PM Bracci, JE Buring, F. Canzian, K. Chang, SJ Chanock, M. Cotterchio, JM Gaziano, EL Giovannucci, M. Goggins, G. Hallmans, SE Hankinson, JA Hoffman Bolton, DJ Hunter, A. Hutchinson, KB Jacobs, M. Jenab, KT Khaw, P. Kraft, V. Krogh, RC Kurtz, RR McWilliams, JB Mendelsohn, AV Patel, KG Rabe, E. Riboli, XO Shu, A. Tjønneland, GS Tobias, D. Trichopoulos, J. Virtamo, K. Visvanathan, J. Watters, H. Yu, A. Zeleniuch-Jacquotte, L. Amundadottir, and RZ Stolzenberg-Solomon, Pathway analysis of genome-wide association study data highlights pancreatic development genes as susceptibility factors for pancreatic cancer. Carcinogenesis, 2012. 33(7):1384-1390.

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220. Perry, JR, BF Voight, L. Yengo, N. Amin, J. Dupuis, M. Ganser, H. Grallert, P. Navarro, M. Li, L. Qi, V. Steinthorsdottir, RA Scott, P. Almgren, DE Arking, Y. Aulchenko, B. Balkau, R. Benediktsson, RN Bergman, E. Boerwinkle, L. Bonnycastle, NP Burtt, H. Campbell, G. Charpentier, FS Collins, C. Gieger, T. Green, S. Hadjadj, AT Hattersley, C. Herder, A. Hofman, AD Johnson, A. Kottgen, P. Kraft, Y. Labrune, C. Langenberg, AK Manning, KL Mohlke, AP Morris, B. Oostra, J. Pankow, AK Petersen, PP Pramstaller, I. Prokopenko, W. Rathmann, W. Rayner, M. Roden, I. Rudan, D. Rybin, LJ Scott, G. Sigurdsson, R. Sladek, G. Thorleifsson, U. Thorsteinsdottir, J. Tuomilehto, AG Uitterlinden, S. Vivequin, MN Weedon, AF Wright; MAGIC; DIAGRAM Consortium; GIANT Consortium, FB Hu, T. Illig, L. Kao, JB Meigs, JF Wilson, K. Stefansson, C. van Duijn, D. Altschuler, AD Morris, M. Boehnke, MI McCarthy, P. Froguel, CN Palmer, NJ Wareham, L. Groop, TM Frayling, and S. Cauchi, Stratifying Type 2 Diabetes Cases by BMI Identifies Genetic Risk Variants in LAMA1 and Enrichment for Risk Variants in Lean Compared to Obese Cases. PLoS Genet, 2012;8(5): e1002741.

221. Stevens, KN, S. Lindstrom, CG Scott, D. Thompson, TA Sellers, X. Wang, A. Wang, E. Atkinson, DN Rider, JE Eckel-Passow, JS Varghese, T. Audley, J. Brown, J. Leyland, RN Luben, RM Warren, RJ Loos, NJ Wareham, J. Li, P. Hall, J. Liu, L. Eriksson, K. Czene, JE Olson, V. Shane Pankratz, Z. Fredericksen, RB Diasio, AM Lee, JA Heit, M. Deandrade, EL Goode, RA Vierkant, JM Cunningham, SM Armasu, R. Weinshilboum, BL Fridley, A. Batzler, JN Ingle, NF Boyd, AD Paterson, J. Rommens, LJ Martin, JL Hopper, MC Southey, J. Stone, C. Apicella, P. Kraft, SE Hankinson, A. Hazra, DJ Hunter, DF Easton, FJ Couch, RM Tamimi, and CM Vachon, Identification of a novel percent mammographic density locus at 12q24. Hum Mol Genet, 2012;21(14):3299-3305.

222. Prescott J, Thompson DJ, Kraft P, Chanock SJ, Audley T, Brown J, Leyland J, Folkerd E, Doody D, Hankinson SE, Hunter DJ, Jacobs KB, Dowsett M, Cox DG, Easton DF, De Vivo I. Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women. PLoS One, 2012. 7(6):e37815.

223. Coviello AD, Haring R, Wellons M, Vaidya D, Lehtimäki T, Keildson S, Lunetta KL, He C, Fornage M, Lagou V, Mangino M, Onland-Moret NC, Chen B, Eriksson J, Garcia M, Liu YM, Koster A, Lohman K, Lyytikäinen LP, Petersen AK, Prescott J, Stolk L, Vandenput L, Wood AR, Zhuang WV, Ruokonen A, Hartikainen AL, Pouta A, Bandinelli S, Biffar R, Brabant G, Cox DG, Chen Y, Cummings S, Ferrucci L, Gunter MJ, Hankinson SE, Martikainen H, Hofman A, Homuth G, Illig T, Jansson JO, Johnson AD, Karasik D, Karlsson M, Kettunen J, Kiel DP, Kraft P, Liu J, Ljunggren O, Lorentzon M, Maggio M, Markus MR, Mellström D, Miljkovic I, Mirel D, Nelson S, Morin Papunen L, Peeters PH, Prokopenko I, Raffel L, Reincke M, Reiner AP, Rexrode K, Rivadeneira F, Schwartz SM, Siscovick D, Soranzo N, Stöckl D, Tworoger S, Uitterlinden AG, van Gils CH, Vasan RS, Wichmann HE, Zhai G, Bhasin S, Bidlingmaier M, Chanock SJ, De Vivo I, Harris TB, Hunter DJ, Kähönen M, Liu S, Ouyang P, Spector TD, van der Schouw YT, Viikari J, Wallaschofski H, McCarthy MI, Frayling TM, Murray A, Franks S, Järvelin MR, de Jong FH, Raitakari O, Teumer A, Ohlsson C, Murabito JM, Perry JR. A genome-wide association meta-analysis of circulating sex hormone-binding globulin reveals multiple Loci implicated in sex steroid hormone regulation. PLoS Genet. 2012 Jul;8(7):e1002805

224. Morris AP, Voight BF, Teslovich TM, Ferreira T, Segrè AV, Steinthorsdottir V, Strawbridge RJ, Khan H, Grallert H, Mahajan A, Prokopenko I, Kang HM, Dina C, Esko T, Fraser RM, Kanoni S, Kumar A, Lagou V, Langenberg C, Luan J, Lindgren CM, Müller-Nurasyid M, Pechlivanis S, Rayner NW, Scott LJ, Wiltshire S, Yengo L, Kinnunen L, Rossin EJ, Raychaudhuri S, Johnson AD, Dimas AS, Loos RJ, Vedantam S, Chen H, Florez JC, Fox C, Liu CT, Rybin D, Couper DJ, Kao WH, Li M, Cornelis MC, Kraft P, Sun Q, van Dam RM, Stringham HM, Chines PS, Fischer K, Fontanillas P, Holmen OL, Hunt SE, Jackson AU, Kong A, Lawrence R, Meyer J, Perry JR, Platou CG, Potter S, Rehnberg E, Robertson N, Sivapalaratnam S, Stančáková A, Stirrups K, Thorleifsson G, Tikkanen E, Wood AR, Almgren P, Atalay M, Benediktsson R, Bonnycastle LL, Burtt N, Carey J, Charpentier G, Crenshaw AT, Doney AS, Dorkhan M, Edkins S, Emilsson V, Eury E, Forsen T, Gertow K, Gigante B, Grant GB, Groves CJ, Guiducci C, Herder C, Hreidarsson AB, Hui J, James A, Jonsson A, Rathmann W, Klopp N, Kravic J, Krjutškov K, Langford C, Leander K, Lindholm E, Lobbens S, Männistö S, Mirza G, Mühleisen TW,

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Musk B, Parkin M, Rallidis L, Saramies J, Sennblad B, Shah S, Sigurðsson G, Silveira A, Steinbach G, Thorand B, Trakalo J, Veglia F, Wennauer R, Winckler W, Zabaneh D, Campbell H, van Duijn C, Uitterlinden AG, Hofman A, Sijbrands E, Abecasis GR, Owen KR, Zeggini E, Trip MD, Forouhi NG, Syvänen AC, Eriksson JG, Peltonen L, Nöthen MM, Balkau B, Palmer CN, Lyssenko V, Tuomi T, Isomaa B, Hunter DJ, Qi L; Wellcome Trust Case Control Consortium; Meta-Analyses of Glucose and Insulin-related traits Consortium (MAGIC) Investigators; Genetic Investigation of ANthropometric Traits (GIANT) Consortium; Asian Genetic Epidemiology Network–Type 2 Diabetes (AGEN-T2D) Consortium; South Asian Type 2 Diabetes (SAT2D) Consortium, Shuldiner AR, Roden M, Barroso I, Wilsgaard T, Beilby J, Hovingh K, Price JF, Wilson JF, Rauramaa R, Lakka TA, Lind L, Dedoussis G, Njølstad I, Pedersen NL, Khaw KT, Wareham NJ, Keinanen-Kiukaanniemi SM, Saaristo TE, Korpi-Hyövälti E, Saltevo J, Laakso M, Kuusisto J, Metspalu A, Collins FS, Mohlke KL, Bergman RN, Tuomilehto J, Boehm BO, Gieger C, Hveem K, Cauchi S, Froguel P, Baldassarre D, Tremoli E, Humphries SE, Saleheen D, Danesh J, Ingelsson E, Ripatti S, Salomaa V, Erbel R, Jöckel KH, Moebus S, Peters A, Illig T, de Faire U, Hamsten A, Morris AD, Donnelly PJ, Frayling TM, Hattersley AT, Boerwinkle E, Melander O, Kathiresan S, Nilsson PM, Deloukas P, Thorsteinsdottir U, Groop LC, Stefansson K, Hu F, Pankow JS, Dupuis J, Meigs JB, Altshuler D, Boehnke M, McCarthy MI; DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium. Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes. Nat Genet, 2012. 44(9):981-990.

225. Hüsing A, Canzian F, Beckmann L, Garcia-Closas M, Diver WR, Thun MJ, Berg CD, Hoover RN, Ziegler RG, Figueroa JD, Isaacs C, Olsen A, Viallon V, Boeing H, Masala G, Trichopoulos D, Peeters PH, Lund E, Ardanaz E, Khaw KT, Lenner P, Kolonel LN, Stram DO, Le Marchand L, McCarty CA, Buring JE, Lee IM, Zhang S, Lindström S, Hankinson SE, Riboli E, Hunter DJ, Henderson BE, Chanock SJ, Haiman CA, Kraft P, Kaaks R; BPC3. Prediction of breast cancer risk by genetic risk factors, overall and by hormone receptor status. J Med Genet, 2012. 49(9):601-608.

226. Wu C, Kraft P, Zhai K, Chang J, Wang Z, Li Y, Hu Z, He Z, Jia W, Abnet CC, Liang L, Hu N, Miao X, Zhou Y, Liu Z, Zhan Q, Liu Y, Qiao Y, Zhou Y, Jin G, Guo C, Lu C, Yang H, Fu J, Yu D, Freedman ND, Ding T, Tan W, Goldstein AM, Wu T, Shen H, Ke Y, Zeng Y, Chanock SJ, Taylor PR, Lin D. Genome-wide association analyses of esophageal squamous cell carcinoma in Chinese identify multiple susceptibility loci and gene-environment interactions. Nat Genet, 2012. 44(10):1090-1097.

227. Elena JW, Steplowski E, Yu K, Hartge P, Tobias GS, Brotzman MJ, Chanock SJ, Stolzenberg-Solomon RZ, Arslan AA, Bueno-de-Mesquita HB, Helzlsouer K, Jacobs EJ, Lacroix A, Petersen G, Zheng W, Albanes D, Allen NE, Amundadottir L, Bao Y, Boeing H, Boutron-Ruault MC, Buring JE, Gaziano JM, Giovannucci EL, Duell EJ, Hallmans G, Howard BV, Hunter DJ, Hutchinson A, Jacobs KB, Kooperberg C, Kraft P, Mendelsohn JB, Michaud DS, Palli D, Phillips LS, Overvad K, Patel AV, Sansbury L, Shu XO, Simon MS, Slimani N, Trichopoulos D, Visvanathan K, Virtamo J, Wolpin BM, Zeleniuch-Jacquotte A, Fuchs CS, Hoover RN, Gross M. Diabetes and risk of pancreatic cancer: a pooled analysis from the pancreatic cancer cohort consortium. Cancer Causes Control, 2013. 24(1):13-25.

228. Zaitlen N, Lindström S, Pasaniuc B, Cornelis M, Genovese G, Pollack S, Barton A, Bickeböller H, Bowden DW, Eyre S, Freedman BI, Friedman DJ, Field JK, Groop L, Haugen A, Heinrich J, Henderson BE, Hicks PJ, Hocking LJ, Kolonel LN, Landi MT, Langefeld CD, Le Marchand L, Meister M, Morgan AW, Raji OY, Risch A, Rosenberger A, Scherf D, Steer S, Walshaw M, Waters KM, Wilson AG, Wordsworth P, Zienolddiny S, Tchetgen ET, Haiman C, Hunter DJ, Plenge RM, Worthington J, Christiani DC, Schaumberg DA, Chasman DI, Altshuler D, Voight B, Kraft P, Patterson N, Price AL. Informed conditioning on clinical covariates increases power in case-control association studies. PLoS Genet, 2012. 8(11):e1003032.

229. Shui IM, Mucci LA, Wilson KM, Kraft P, Penney KL, Stampfer MJ, Giovannucci E. Common genetic variation of the calcium sensing receptor and lethal prostate cancer risk. Cancer Epidemiol Biomarkers Prev, 2013. 22(1):118-126.

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230. Chen YC, Huang YL, Platz EA, Alderete JF, Zheng L, Rider JR, Kraft P, Giovannucci E, Sutcliffe S. Prospective study of effect modification by Toll-like receptor 4 variation on the association between Trichomonas vaginalis serostatus and prostate cancer. Cancer Causes Control, 2013. 24(1):175-180.

231. Wu C, Kraft P, Stolzenberg-Solomon R, Steplowski E, Brotzman M, Xu M, Mudgal P, Amundadottir L, Arslan AA, Bueno-de-Mesquita HB, Gross M, Helzlsouer K, Jacobs EJ, Kooperberg C, Petersen GM, Zheng W, Albanes D, Boutron-Ruault MC, Buring JE, Canzian F, Cao G, Duell EJ, Elena JW, Gaziano JM, Giovannucci EL, Hallmans G, Hutchinson A, Hunter DJ, Jenab M, Jiang G, Khaw KT, Lacroix A, Li Z, Mendelsohn JB, Panico S, Patel AV, Qian ZR, Riboli E, Sesso H, Shen H, Shu XO, Tjonneland A, Tobias GS, Trichopoulos D, Virtamo J, Visvanathan K, Wactawski-Wende J, Wang C, Yu K, Zeleniuch-Jacquotte A, Chanock S, Hoover R, Hartge P, Fuchs CS, Lin D, Wolpin BM. Genome-wide association study of survival in patients with pancreatic adenocarcinoma. Gut, 2014. 63(1):152-60..

232. Hendrickson SJ, Hazra A, Chen C, Eliassen AH, Kraft P, Rosner BA, Willett WC. β-Carotene 15,15'-monooxygenase 1 single nucleotide polymorphisms in relation to plasma carotenoid and retinol concentrations in women of European descent. Am J Clin Nutr, 2012. 96(6):1379-1389.

233. Bao Y, Giovannucci EL, Kraft P, Stampfer MJ, Ogino S, Ma J, Buring JE, Sesso HD, Lee IM, Gaziano JM, Rifai N, Pollak MN, Cochrane BB, Kaklamani V, Lin JH, Manson JE, Fuchs CS, Wolpin BM. A prospective study of plasma adiponectin and pancreatic cancer risk in five US cohorts. J Natl Cancer Inst, 2013. 105(2):95-103.

234. Siddiq A, Couch FJ, Chen GK, Lindström S, Eccles D, Millikan RC, Michailidou K, Stram DO, Beckmann L, Rhie SK, Ambrosone CB, Aittomäki K, Amiano P, Apicella C; Australian Breast Cancer Tissue Bank Investigators, Baglietto L, Bandera EV, Beckmann MW, Berg CD, Bernstein L, Blomqvist C, Brauch H, Brinton L, Bui QM, Buring JE, Buys SS, Campa D, Carpenter JE, Chasman DI, Chang-Claude J, Chen C, Clavel-Chapelon F, Cox A, Cross SS, Czene K, Deming SL, Diasio RB, Diver WR, Dunning AM, Durcan L, Ekici AB, Fasching PA; Familial Breast Cancer Study, Feigelson HS, Fejerman L, Figueroa JD, Fletcher O, Flesch-Janys D, Gaudet MM; The GENICA Consortium, Gerty SM, Rodriguez-Gil JL, Giles GG, van Gils CH, Godwin AK, Graham N, Greco D, Hall P, Hankinson SE, Hartmann A, Hein R, Heinz J, Hoover RN, Hopper JL, Hu JJ, Huntsman S, Ingles SA, Irwanto A, Isaacs C, Jacobs KB, John EM, Justenhoven C, Kaaks R, Kolonel LN, Coetzee GA, Lathrop M, Le Marchand L, Lee AM, Lee IM, Lesnick T, Lichtner P, Liu J, Lund E, Makalic E, Martin NG, McLean CA, Meijers-Heijboer H, Meindl A, Miron P, Monroe KR, Montgomery GW, Müller-Myhsok B, Nickels S, Nyante SJ, Olswold C, Overvad K, Palli D, Park DJ, Palmer JR, Pathak H, Peto J, Pharoah P, Rahman N, Rivadeneira F, Schmidt DF, Schmutzler RK, Slager S, Southey MC, Stevens KN, Sinn HP, Press MF, Ross E, Riboli E, Ridker PM, Schumacher FR, Severi G, Dos Santos Silva I, Stone J, Sund M, Tapper WJ, Thun MJ, Travis RC, Turnbull C, Uitterlinden AG, Waisfisz Q, Wang X, Wang Z, Weaver J, Schulz-Wendtland R, Wilkens LR, Van Den Berg D, Zheng W, Ziegler RG, Ziv E, Nevanlinna H, Easton DF, Hunter DJ, Henderson BE, Chanock SJ, Garcia-Closas M, Kraft P, Haiman CA, Vachon CM. A meta-analysis of genome-wide association studies of breast cancer identifies two novel susceptibility loci at 6q14 and 20q11. Hum Mol Genet, 2012. 21(24):5373-5384.

235. Machiela MJ, Chen C, Liang L, Diver WR, Stevens VL, Tsilidis KK, Haiman CA, Chanock SJ, Hunter DJ, Kraft P; on behalf of the National Cancer Institute Breast and Prostate Cancer Cohort Consortium. One thousand genomes imputation in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium aggressive prostate cancer genome-wide association study. Prostate, 2013. 73(7):677-689.

236. Hiraki LT, Major JM, Chen C, Cornelis MC, Hunter DJ, Rimm EB, Simon KC, Weinstein SJ, Purdue MP, Yu K, Albanes D, Kraft P. Exploring the genetic architecture of circulating 25-hydroxyvitamin D. Genet Epidemiol, 2013. 37(1):92-98.

237. Amin Al Olama A, Kote-Jarai Z, Schumacher FR, Wiklund F, Berndt SI, Benlloch S, Giles GG, Severi G, Neal DE, Hamdy FC, Donovan JL, Hunter DJ, Henderson BE, Thun MJ, Gaziano M, Giovannucci EL, Siddiq A, Travis RC, Cox DG, Canzian F, Riboli E, Key TJ, Andriole G, Albanes D, Hayes RB, Schleutker J, Auvinen A, Tammela TL, Weischer M, Stanford JL, Ostrander EA, Cybulski C, Lubinski J, Thibodeau SN, Schaid DJ, Sorensen KD, Batra J, Clements JA, Chambers S, Aitken J, Gardiner RA,

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Maier C, Vogel W, Dörk T, Brenner H, Habuchi T, Ingles S, John EM, Dickinson JL, Cannon-Albright L, Teixeira MR, Kaneva R, Zhang HW, Lu YJ, Park JY, Cooney KA, Muir KR, Leongamornlert DA, Saunders E, Tymrakiewicz M, Mahmud N, Guy M, Govindasami K, O'Brien LT, Wilkinson RA, Hall AL, Sawyer EJ, Dadaev T, Morrison J, Dearnaley DP, Horwich A, Huddart RA, Khoo VS, Parker CC, Van As N, Woodhouse CJ, Thompson A, Dudderidge T, Ogden C, Cooper CS, Lophatonanon A, Southey MC, Hopper JL, English D, Virtamo J, Le Marchand L, Campa D, Kaaks R, Lindstrom S, Diver WR, Gapstur S, Yeager M, Cox A, Stern MC, Corral R, Aly M, Isaacs W, Adolfsson J, Xu J, Zheng SL, Wahlfors T, Taari K, Kujala P, Klarskov P, Nordestgaard BG, Røder MA, Frikke-Schmidt R, Bojesen SE, Fitzgerald LM, Kolb S, Kwon EM, Karyadi DM, Orntoft TF, Borre M, Rinckleb A, Luedeke M, Herkommer K, Meyer A, Serth J, Marthick JR, Patterson B, Wokolorczyk D, Spurdle A, Lose F, McDonnell SK, Joshi AD, Shahabi A, Pinto P, Santos J, Ray A, Sellers TA, Lin HY, Stephenson RA, Teerlink C, Muller H, Rothenbacher D, Tsuchiya N, Narita S, Cao GW, Slavov C, Mitev V; The UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology; The UK ProtecT Study Collaborators; The Australian Prostate Cancer Bioresource; The PRACTICAL Consortium, Chanock S, Gronberg H, Haiman CA, Kraft P, Easton DF, Eeles RA. A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease. Hum Mol Genet, 2013. 22(2):408-415.

238. Du M, Prescott J, Cornelis MC, Hankinson SE, Giovannucci E, Kraft P, De Vivo I. Genetic predisposition to higher body mass index or type 2 diabetes and leukocyte telomere length in the Nurses' Health Study. PLoS One, 2013. 8(2): e52240.

239. Vimaleswaran KS, Berry DJ, Lu C, Tikkanen E, Pilz S, Hiraki LT, Cooper JD, Dastani Z, Li R, Houston DK, Wood AR, Michaëlsson K, Vandenput L, Zgaga L, Yerges-Armstrong LM, McCarthy MI, Dupuis J, Kaakinen M, Kleber ME, Jameson K, Arden N, Raitakari O, Viikari J, Lohman KK, Ferrucci L, Melhus H, Ingelsson E, Byberg L, Lind L, Lorentzon M, Salomaa V, Campbell H, Dunlop M, Mitchell BD, Herzig KH, Pouta A, Hartikainen AL; Genetic Investigation of Anthropometric Traits-GIANT Consortium, Streeten EA, Theodoratou E, Jula A, Wareham NJ, Ohlsson C, Frayling TM, Kritchevsky SB, Spector TD, Richards JB, Lehtimäki T, Ouwehand WH, Kraft P, Cooper C, März W, Power C, Loos RJ, Wang TJ, Järvelin MR, Whittaker JC, Hingorani AD, Hyppönen E. Causal relationship between obesity and vitamin D status: bi-directional Mendelian randomization analysis of multiple cohorts. PLoS Med, 2013. 10(2): e1001383.

240. Pasquale LR, Loomis SJ, Aschard H, Kang JH, Cornelis MC, Qi L, Kraft P, Hu FB. Exploring genome-wide-dietary heme iron intake interactions and the risk of type 2 diabetes. Front Genet, 2013. 4:7. doi: 10.3389/fgene.2013.00007. Epub 2013 Jan 30.

241. Tsilidis KK, Travis RC, Appleby PN, Allen NE, Lindström S, Albanes D, Ziegler RG, McCullough ML, Siddiq A, Barricarte A, Berndt SI, Bueno-de-Mesquita HB, Chanock SJ, Crawford ED, Diver WR, Gapstur SM, Giovannucci E, Gu F, Haiman CA, Hayes RB, Hunter DJ, Johansson M, Kaaks R, Kolonel LN, Kraft P, Le Marchand L, Overvad K, Polidoro S, Riboli E, Schumacher FR, Stevens VL, Trichopoulos D, Virtamo J, Willett WC, Key TJ. Insulin-like growth factor pathway genes and blood concentrations, dietary protein and risk of prostate cancer in the NCI Breast and Prostate Cancer Cohort Consortium (BPC3). Int J Cancer, 2013. 133(2):495-504.

242. Köttgen A, Albrecht E, Teumer A, Vitart V, Krumsiek J, Hundertmark C, Pistis G, Ruggiero D, O'Seaghdha CM, Haller T, Yang Q, Tanaka T, Johnson AD, Kutalik Z, Smith AV, Shi J, Struchalin M, Middelberg RP, Brown MJ, Gaffo AL, Pirastu N, Li G, Hayward C, Zemunik T, Huffman J, Yengo L, Zhao JH, Demirkan A, Feitosa MF, Liu X, Malerba G, Lopez LM, van der Harst P, Li X, Kleber ME, Hicks AA, Nolte IM, Johansson A, Murgia F, Wild SH, Bakker SJ, Peden JF, Dehghan A, Steri M, Tenesa A, Lagou V, Salo P, Mangino M, Rose LM, Lehtimäki T, Woodward OM, Okada Y, Tin A, Müller C, Oldmeadow C, Putku M, Czamara D, Kraft P, Frogheri L, Thun GA, Grotevendt A, Gislason GK, Harris TB, Launer LJ, McArdle P, Shuldiner AR, Boerwinkle E, Coresh J, Schmidt H, Schallert M, Martin NG, Montgomery GW, Kubo M, Nakamura Y, Tanaka T, Munroe PB, Samani NJ, Jacobs DR Jr, Liu K, D'Adamo P, Ulivi S, Rotter JI, Psaty BM, Vollenweider P, Waeber G, Campbell S, Devuyst O,

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Navarro P, Kolcic I, Hastie N, Balkau B, Froguel P, Esko T, Salumets A, Khaw KT, Langenberg C, Wareham NJ, Isaacs A, Kraja A, Zhang Q, Wild PS, Scott RJ, Holliday EG, Org E, Viigimaa M, Bandinelli S, Metter JE, Lupo A, Trabetti E, Sorice R, Döring A, Lattka E, Strauch K, Theis F, Waldenberger M, Wichmann HE, Davies G, Gow AJ, Bruinenberg M; LifeLines Cohort Study, Stolk RP, Kooner JS, Zhang W, Winkelmann BR, Boehm BO, Lucae S, Penninx BW, Smit JH, Curhan G, Mudgal P, Plenge RM, Portas L, Persico I, Kirin M, Wilson JF, Mateo Leach I, van Gilst WH, Goel A, Ongen H, Hofman A, Rivadeneira F, Uitterlinden AG, Imboden M, von Eckardstein A, Cucca F, Nagaraja R, Piras MG, Nauck M, Schurmann C, Budde K, Ernst F, Farrington SM, Theodoratou E, Prokopenko I, Stumvoll M, Jula A, Perola M, Salomaa V, Shin SY, Spector TD, Sala C, Ridker PM, Kähönen M, Viikari J, Hengstenberg C, Nelson CP; CARDIoGRAM Consortium; DIAGRAM Consortium; ICBP Consortium; MAGIC Consortium, Meschia JF, Nalls MA, Sharma P, Singleton AB, Kamatani N, Zeller T, Burnier M, Attia J, Laan M, Klopp N, Hillege HL, Kloiber S, Choi H, Pirastu M, Tore S, Probst-Hensch NM, Völzke H, Gudnason V, Parsa A, Schmidt R, Whitfield JB, Fornage M, Gasparini P, Siscovick DS, Polašek O, Campbell H, Rudan I, Bouatia-Naji N, Metspalu A, Loos RJ, van Duijn CM, Borecki IB, Ferrucci L, Gambaro G, Deary IJ, Wolffenbuttel BH, Chambers JC, März W, Pramstaller PP, Snieder H, Gyllensten U, Wright AF, Navis G, Watkins H, Witteman JC, Sanna S, Schipf S, Dunlop MG, Tönjes A, Ripatti S, Soranzo N, Toniolo D, Chasman DI, Raitakari O, Kao WH, Ciullo M, Fox CS, Caulfield M, Bochud M, Gieger C. Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. Nat Genet, 2013. 45(2):145-154.

243. Lee SH, Harold D, Nyholt DR; ANZGene Consortium; International Endogene Consortium; Genetic and Environmental Risk for Alzheimer's disease Consortium, Goddard ME, Zondervan KT, Williams J, Montgomery GW, Wray NR, Visscher PM. Estimation and partitioning of polygenic variation captured by common SNPs for Alzheimer's disease, multiple sclerosis and endometriosis. Hum Mol Genet, 2013. 22(4):832-841.

244. Tabassum R, Chauhan G, Dwivedi OP, Mahajan A, Jaiswal A, Kaur I, Bandesh K, Singh T, Mathai BJ, Pandey Y, Chidambaram M, Sharma A, Chavali S, Sengupta S, Ramakrishnan L, Venkatesh P, Aggarwal SK, Ghosh S, Prabhakaran D, Srinath RK, Saxena M, Banerjee M, Mathur S, Bhansali A, Shah VN, Madhu SV, Marwaha RK, Basu A, Scaria V, McCarthy MI; DIAGRAM; INDICO, Venkatesan R, Mohan V, Tandon N, Bharadwaj D. Genome-wide association study for type 2 diabetes in Indians identifies a new susceptibility locus at 2q21. Diabetes, 2013. 62(3):977-986.

245. Leenders M, Bhattacharjee S, Vineis P, Stevens V, Bueno-de-Mesquita HB, Shu XO, Amundadottir L, Gross M, Tobias GS, Wactawski-Wende J, Arslan AA, Duell EJ, Fuchs CS, Gallinger S, Hartge P, Hoover RN, Holly EA, Jacobs EJ, Klein AP, Kooperberg C, LaCroix A, Li D, Mandelson MT, Olson SH, Petersen G, Risch HA, Yu K, Wolpin BM, Zheng W, Agalliu I, Albanes D, Boutron-Ruault MC, Bracci PM, Buring JE, Canzian F, Chang K, Chanock SJ, Cotterchio M, Gaziano JM, Giovanucci EL, Goggins M, Hallmans G, Hankinson SE, Hoffman-Bolton JA, Hunter DJ, Hutchinson A, Jacobs KB, Jenab M, Khaw KT, Kraft P, Krogh V, Kurtz RC, McWilliams RR, Mendelsohn JB, Patel AV, Rabe KG, Riboli E, Tjønneland A, Trichopoulos D, Virtamo J, Visvanathan K, Elena JW, Yu H, Zeleniuch-Jacquotte A, Stolzenberg-Solomon RZ. Polymorphisms in genes related to one-carbon metabolism are not related to pancreatic cancer in PanScan and PanC4. Cancer Causes Control, 2013. 24(3):595-602.

246. Kote-Jarai Z, Saunders EJ, Leongamornlert DA, Tymrakiewicz M, Dadaev T, Jugurnauth-Little S, Ross-Adams H, Al Olama AA, Benlloch S, Halim S, Russel R, Dunning AM, Luccarini C, Dennis J, Neal DE, Hamdy FC, Donovan JL, Muir K, Giles GG, Severi G, Wiklund F, Gronberg H, Haiman CA, Schumacher F, Henderson BE, Marchand LL, Lindstrom S, Kraft P, Hunter DJ, Gapstur S, Chanock S, Berndt SI, Albanes D, Andriole G, Schleutker J, Weischer M, Canzian F, Riboli E, Key TJ, Travis RC, Campa D, Ingles SA, John EM, Hayes RB, Pharoah P, Khaw KT, Stanford JL, Ostrander EA, Signorello LB, Thibodeau SN, Schaid D, Maier C, Vogel W, Kibel AS, Cybulski C, Lubinski J, Cannon-Albright L, Brenner H, Park JY, Kaneva R, Batra J, Spurdle A, Clements JA, Teixeira MR, Govindasami K, Guy M, Wilkinson RA, Sawyer EJ, Morgan A, Dicks E, Baynes C, Conroy D, Bojesen SE, Kaaks R, Vincent D, Bacot F, Tessier DC; COGS-CRUK GWAS-ELLIPSE (Part of GAME-ON) Initiative; The UK

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Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons’ Section of Oncology; The UK ProtecT Study Collaborators; The PRACTICAL Consortium, Easton DF, Eeles RA. Fine-mapping identifies multiple prostate cancer risk loci at 5p15, one of which associates with TERT expression. Hum Mol Genet, 2013. 22(12):2520-8.

247. Chen CY, Pollack S, Hunter DJ, Hirschhorn JN, Kraft P, Price AL. Improved ancestry inference using weights from external reference panels. Bioinformatics, 2013. 29(11):1399-406.

248. Eeles RA, Olama AA, Benlloch S, Saunders EJ, Leongamornlert DA, Tymrakiewicz M, Ghoussaini M, Luccarini C, Dennis J, Jugurnauth-Little S, Dadaev T, Neal DE, Hamdy FC, Donovan JL, Muir K, Giles GG, Severi G, Wiklund F, Gronberg H, Haiman CA, Schumacher F, Henderson BE, Le Marchand L, Lindstrom S, Kraft P, Hunter DJ, Gapstur S, Chanock SJ, Berndt SI, Albanes D, Andriole G, Schleutker J, Weischer M, Canzian F, Riboli E, Key TJ, Travis RC, Campa D, Ingles SA, John EM, Hayes RB, Pharoah PD, Pashayan N, Khaw KT, Stanford JL, Ostrander EA, Signorello LB, Thibodeau SN, Schaid D, Maier C, Vogel W, Kibel AS, Cybulski C, Lubinski J, Cannon-Albright L, Brenner H, Park JY, Kaneva R, Batra J, Spurdle AB, Clements JA, Teixeira MR, Dicks E, Lee A, Dunning AM, Baynes C, Conroy D, Maranian MJ, Ahmed S, Govindasami K, Guy M, Wilkinson RA, Sawyer EJ, Morgan A, Dearnaley DP, Horwich A, Huddart RA, Khoo VS, Parker CC, Van As NJ, Woodhouse CJ, Thompson A, Dudderidge T, Ogden C, Cooper CS, Lophatananon A, Cox A, Southey MC, Hopper JL, English DR, Aly M, Adolfsson J, Xu J, Zheng SL, Yeager M, Kaaks R, Diver WR, Gaudet MM, Stern MC, Corral R, Joshi AD, Shahabi A, Wahlfors T, Tammela TL, Auvinen A, Virtamo J, Klarskov P, Nordestgaard BG, Røder MA, Nielsen SF, Bojesen SE, Siddiq A, Fitzgerald LM, Kolb S, Kwon EM, Karyadi DM, Blot WJ, Zheng W, Cai Q, McDonnell SK, Rinckleb AE, Drake B, Colditz G, Wokolorczyk D, Stephenson RA, Teerlink C, Muller H, Rothenbacher D, Sellers TA, Lin HY, Slavov C, Mitev V, Lose F, Srinivasan S, Maia S, Paulo P, Lange E, Cooney KA, Antoniou AC, Vincent D, Bacot F, Tessier DC; COGS–Cancer Research UK GWAS–ELLIPSE (part of GAME-ON) Initiative; stralian Prostate Cancer Bioresource; UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology; UK ProtecT (Prostate testing for cancer and Treatment) Study Collaborators; PRACTICAL (Prostate Cancer Association Group to Investigate Cancer-Associated Alterations in the Genome) Consortium, Kote-Jarai Z, Easton DF. Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. Nat Genet, 2013. 45(4):385-391.

249. Garcia-Closas M, Couch FJ, Lindstrom S, Michailidou K, Schmidt MK, Brook MN, Orr N, Rhie SK, Riboli E, Feigelson HS, Le Marchand L, Buring JE, Eccles D, Miron P, Fasching PA, Brauch H, Chang-Claude J, Carpenter J, Godwin AK, Nevanlinna H, Giles GG, Cox A, Hopper JL, Bolla MK, Wang Q, Dennis J, Dicks E, Howat WJ, Schoof N, Bojesen SE, Lambrechts D, Broeks A, Andrulis IL, Guénel P, Burwinkel B, Sawyer EJ, Hollestelle A, Fletcher O, Winqvist R, Brenner H, Mannermaa A, Hamann U, Meindl A, Lindblom A, Zheng W, Devillee P, Goldberg MS, Lubinski J, Kristensen V, Swerdlow A, Anton-Culver H, Dörk T, Muir K, Matsuo K, Wu AH, Radice P, Teo SH, Shu XO, Blot W, Kang D, Hartman M, Sangrajrang S, Shen CY, Southey MC, Park DJ, Hammet F, Stone J, Veer LJ, Rutgers EJ, Lophatananon A, Stewart-Brown S, Siriwanarangsan P, Peto J, Schrauder MG, Ekici AB, Beckmann MW, Dos Santos Silva I, Johnson N, Warren H, Tomlinson I, Kerin MJ, Miller N, Marme F, Schneeweiss A, Sohn C, Truong T, Laurent-Puig P, Kerbrat P, Nordestgaard BG, Nielsen SF, Flyger H, Milne RL, Perez JI, Menéndez P, Müller H, Arndt V, Stegmaier C, Lichtner P, Lochmann M, Justenhoven C, Ko YD; Gene ENvironmental Interaction and breast CAncer (GENICA) Network, Muranen TA, Aittomäki K, Blomqvist C, Greco D, Heikkinen T, Ito H, Iwata H, Yatabe Y, Antonenkova NN, Margolin S, Kataja V, Kosma VM, Hartikainen JM, Balleine R; kConFab Investigators, Tseng CC, Berg DV, Stram DO, Neven P, Dieudonné AS, Leunen K, Rudolph A, Nickels S, Flesch-Janys D, Peterlongo P, Peissel B, Bernard L, Olson JE, Wang X, Stevens K, Severi G, Baglietto L, McLean C, Coetzee GA, Feng Y, Henderson BE, Schumacher F, Bogdanova NV, Labrèche F, Dumont M, Yip CH, Taib NA, Cheng CY, Shrubsole M, Long J, Pylkäs K, Jukkola-Vuorinen A, Kauppila S, Knight JA, Glendon G, Mulligan AM, Tollenaar RA, Seynaeve CM, Kriege M, Hooning MJ, van den Ouweland AM, van Deurzen CH, Lu W, Gao YT, Cai H, Balasubramanian SP, Cross SS,

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272. Klein AP, Lindström S, Mendelsohn JB, Steplowski E, Arslan AA, Bueno-de-Mesquita HB, Fuchs CS, Gallinger S, Gross M, Helzlsouer K, Holly EA, Jacobs EJ, Lacroix A, Li D, Mandelson MT, Olson SH, Petersen GM, Risch HA, Stolzenberg-Solomon RZ, Zheng W, Amundadottir L, Albanes D, Allen NE, Bamlet WR, Boutron-Ruault MC, Buring JE, Bracci PM, Canzian F, Clipp S, Cotterchio M, Duell EJ, Elena J, Gaziano JM, Giovannucci EL, Goggins M, Hallmans G, Hassan M, Hutchinson A, Hunter DJ, Kooperberg C, Kurtz RC, Liu S, Overvad K, Palli D, Patel AV, Rabe KG, Shu XO, Slimani N, Tobias GS, Trichopoulos D, Van Den Eeden SK, Vineis P, Virtamo J, Wactawski-Wende J, Wolpin BM, Yu H, Yu K, Zeleniuch-Jacquotte A, Chanock SJ, Hoover RN, Hartge P, Kraft P. An absolute risk model to identify individuals at elevated risk for pancreatic cancer in the general population. PLoS One, 2013. 8(9):e72311.

273. De Vivo I, Prescott J, Setiawan VW, Olson SH, Wentzensen N; The Australian National Endometrial Cancer Study Group, Attia J, Black A, Brinton L, Chen C, Chen C, Cook LS, Crous-Bou M, Doherty J, Dunning AM, Easton DF, Friedenreich CM, Garcia-Closas M, Gaudet MM, Haiman C, Hankinson SE, Hartge P, Henderson BE, Holliday E, Horn-Ross PL, Hunter DJ, Le Marchand L, Liang X, Lissowska J, Long J, Lu L, Magliocco AM, McEvoy M, O'Mara TA, Orlow I, Painter JN, Pooler L, Rastogi R, Rebbeck TR, Risch H, Sacerdote C, Schumacher F, Scott RJ, Sheng X, Shu XO, Spurdle AB, Thompson D, Vanden Berg D, Weiss NS, Xia L, Xiang YB, Yang HP, Yu H, Zheng W, Chanock S, Kraft P. Genome-wide association study of endometrial cancer in E2C2. Hum Genet, 2014. 133(2):211-24.

274. Yuan C, Bao Y, Wu C, Kraft P, Ogino S, Ng K, Qian ZR, Rubinson DA, Stampfer MJ, Giovannucci EL, Wolpin BM. Prediagnostic body mass index and pancreatic cancer survival. J Clin Oncol, 2013.

275. Figueroa JD, Ye Y, Siddiq A, Garcia-Closas M, Chatterjee N, Prokunina-Olsson L, Cortessis VK, Kooperberg C, Cussenot O, Benhamou S, Prescott J, Porru S, Dinney CP, Malats N, Baris D, Purdue M, Jacobs EJ, Albanes D, Wang Z, Deng X, Chung CC, Tang W, Bueno-de-Mesquita HB, Trichopoulos D, Ljungberg B, Clavel-Chapelon F, Weiderpass E, Krogh V, Dorronsoro M, Travis R, Tjønneland A, Brenan P, Chang-Claude J, Riboli E, Conti D, Gago-Dominguez M, Stern MC, Pike MC, Van Den Berg D, Yuan JM, Hohensee C, Rodabough R, Cancel-Tassin G, Roupret M, Comperat E, Chen C, De Vivo I, Giovannucci E, Hunter DJ, Kraft P, Lindstrom S, Carta A, Pavanello S, Arici C, Mastrangelo G, Kamat AM, Lerner SP, Grossman HB, Lin J, Gu J, Pu X, Hutchinson A, Burdette L, Wheeler W, Kogevinas M,

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Tardón A, Serra C, Carrato A, García-Closas R, Lloreta J, Schwenn M, Karagas M, Johnson A, Schned A, Armenti KR, Hosain M, Andriole G Jr, Grubb R 3rd, Black A, Diver WR, Gapstur SM, Weinstein SJ, Virtamo J, Haiman CA, Landi MT, Caporaso N, Fraumeni JF Jr, Vineis P, Wu X, Silverman DT, Chanock S, Rothman N. Genome-wide association study identifies multiple loci associated with bladder cancer risk. Hum Mol Genet, 2014. 23(5):1387-98.

276. Hutter CM, Mechanic LE, Chatterjee N, Kraft P, Gillanders EM. Gene-environment interactions in cancer epidemiology: a National Cancer Institute think tank report. Genet Epidemiol, 2013. 37(7):643-57.

277. Stephens SH, Hartz SM, Hoft NR, Saccone NL, Corley RC, Hewitt JK, Hopfer CJ, Breslau N, Coon H, Chen X, Ducci F, Dueker N, Franceschini N, Frank J, Han Y, Hansel NN, Jiang C, Korhonen T, Lind PA, Liu J, Lyytikäinen LP, Michel M, Shaffer JR, Short SE, Sun J, Teumer A, Thompson JR, Vogelzangs N, Vink JM, Wenzlaff A, Wheeler W, Yang BZ, Aggen SH, Balmforth AJ, Baumeister SE, Beaty TH, Benjamin DJ, Bergen AW, Broms U, Cesarini D, Chatterjee N, Chen J, Cheng YC, Cichon S, Couper D, Cucca F, Dick D, Foroud T, Furberg H, Giegling I, Gillespie NA, Gu F, Hall AS, Hällfors J, Han S, Hartmann AM, Heikkilä K, Hickie IB, Hottenga JJ, Jousilahti P, Kaakinen M, Kähönen M, Koellinger PD, Kittner S, Konte B, Landi MT, Laatikainen T, Leppert M, Levy SM, Mathias RA, McNeil DW, Medland SE, Montgomery GW, Murray T, Nauck M, North KE, Paré PD, Pergadia M, Ruczinski I, Salomaa V, Viikari J, Willemsen G, Barnes KC, Boerwinkle E, Boomsma DI, Caporaso N, Edenberg HJ, Francks C, Gelernter J, Grabe HJ, Hops H, Jarvelin MR, Johannesson M, Kendler KS, Lehtimäki T, Magnusson PK, Marazita ML, Marchini J, Mitchell BD, Nöthen MM, Penninx BW, Raitakari O, Rietschel M, Rujescu D, Samani NJ, Schwartz AG, Shete S, Spitz M, Swan GE, Völzke H, Veijola J, Wei Q, Amos C, Cannon DS, Grucza R, Hatsukami D, Heath A, Johnson EO, Kaprio J, Madden P, Martin NG, Stevens VL, Weiss RB, Kraft P, Bierut LJ, Ehringer MA. Distinct loci in the CHRNA5/CHRNA3/CHRNB4 gene cluster are associated with onset of regular smoking. Genet Epidemiol, 2013. 37(8):846-59.

278. Townsend MK, Clish CB, Kraft P, Wu C, Souza AL, Deik AA, Tworoger SS, Wolpin BM. Reproducibility of metabolomic profiles among men and women in 2 large cohort studies. Clin Chem, 2013. 59(11):1657-67.

279. Hiraki LT, Qu C, Hutter CM, Baron JA, Berndt SI, Bézieau S, Brenner H, Caan BJ, Casey G, Chang-Claude J, Chanock SJ, Conti DV, Duggan D, Fuchs CS, Gallinger S, Giovannucci EL, Harrison TA, Hayes RB, Hazra A, Henderson B, Hoffmeister M, Hopper JL, Hudson TJ, Jenkins MA, Küry S, Le Marchand L, Lemire M, Ma J, Manson JE, Nan H, Newcomb PA, Ng K, Potter JD, Schoen RE, Schumacher FR, Seminara D, Slattery ML, Wactawski-Wende J, White E, Wu K, Zanke BW, Kraft P, Peters U, Chan AT. Genetic predictors of circulating 25-hydroxyvitamin D and risk of colorectal cancer. Cancer Epidemiol Biomarkers Prev, 2013. 22(11):2037-46.

280. Rudolph A, Hein R, Lindström S, Beckmann L, Behrens S, Liu J, Aschard H, Bolla MK, Wang J, Truong T, Cordina-Duverger E, Menegaux F, Brüning T, Harth V; GENICA Network, Severi G, Baglietto L, Southey M, Chanock SJ, Lissowska J, Figueroa JD, Eriksson M, Humpreys K, Darabi H, Olson JE, Stevens KN, Vachon CM, Knight JA, Glendon G, Mulligan AM, Ashworth A, Orr N, Schoemaker M, Webb PM; kConFab Investigators; AOCS Management Group, Guénel P, Brauch H, Giles G, García-Closas M, Czene K, Chenevix-Trench G, Couch FJ, Andrulis IL, Swerdlow A, Hunter DJ, Flesch-Janys D, Easton DF, Hall P, Nevanlinna H, Kraft P, Chang-Claude J; Breast Cancer Association Consortium. Genetic modifiers of menopausal hormone replacement therapy and breast cancer risk: a genome-wide interaction study. Endocr Relat Cancer, 2013. 20(6):875-87.

281. Du M, Kraft P, Eliassen AH, Giovannucci E, Hankinson SE, De Vivo I. Physical activity and risk of endometrial adenocarcinoma in the Nurses' Health Study. Int J Cancer, 2014. 134(11):2707-16. PMCID: PMC3960316.

282. Nan H, Morikawa T, Suuriniemi M, Imamura Y, Werner L, Kuchiba A, Yamauchi M, Hunter DJ, Kraft P, Giovannucci EL, Fuchs CS, Ogino S, Freedman ML, Chan AT. Aspirin use, 8q24 single nucleotide

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polymorphism rs6983267, and colorectal cancer according to CTNNB1 alterations. J Natl Cancer Inst, 2013. 105(24):1852-61.

283. Campa D, Barrdahl M, Tsilidis KK, Severi G, Diver WR, Siddiq A, Chanock S, Hoover RN, Ziegler RG, Berg CD, Buys SS, Haiman CA, Henderson BE, Schumacher FR, Le Marchand L, Flesch-Janys D, Lindström S, Hunter DJ, Hankinson SE, Willett WC, Kraft P, Cox DG, Khaw KT, Tjønneland A, Dossus L, Trichopoulos D, Panico S, van Gils CH, Weiderpass E, Barricarte A, Sund M, Gaudet MM, Giles G, Southey M, Baglietto L, Chang-Claude J, Kaaks R, Canzian F. A genome-wide "pleiotropy scan" does not identify new susceptibility loci for estrogen receptor negative breast cancer. PLoS One, 2014. 9(2):e85955.

284. Hiraki LT, Joshi AD, Ng K, Fuchs CS, Ma J, Hazra A, Peters U, Karlson EW, Giovannucci E, Kraft P, Chan AT. Joint effects of colorectal cancer susceptibility loci, circulating 25-hydroxyvitamin D and risk of colorectal cancer. PLoS One, 2014. 9(3):e92212.

285. Hara K, Fujita H, Johnson TA, Yamauchi T, Yasuda K, Horikoshi M, Peng C, Hu C, Ma RC, Imamura M, Iwata M, Tsunoda T, Morizono T, Shojima N, So WY, Leung TF, Kwan P, Zhang R, Wang J, Yu W, Maegawa H, Hirose H; DIAGRAM consortium, Kaku K, Ito C, Watada H, Tanaka Y, Tobe K, Kashiwagi A, Kawamori R, Jia W, Chan JC, Teo YY, Shyong TE, Kamatani N, Kubo M, Maeda S, Kadowaki T. Genome-wide association study identifies three novel loci for type 2 diabetes. Hum Mol Genet, 2014. 23(1):239-46.

286. Shui IM, Lindström S, Kibel AS, Berndt SI, Campa D, Gerke T, Penney KL, Albanes D, Berg C, Bueno-de-Mesquita HB, Chanock S, Crawford ED, Diver WR, Gapstur SM, Gaziano JM, Giles GG, Henderson B, Hoover R, Johansson M, Le Marchand L, Ma J, Navarro C, Overvad K, Schumacher FR, Severi G, Siddiq A, Stampfer M, Stevens VL, Travis RC, Trichopoulos D, Vineis P, Mucci LA, Yeager M, Giovannucci E, Kraft P. Prostate cancer (PCa) risk variants and risk of fatal PCa in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium. Eur Urol, 2014. 65(6):1069-75.

287. Claussnitzer M, Dankel SN, Klocke B, Grallert H, Glunk V, Berulava T, Lee H, Oskolkov N, Fadista J, Ehlers K, Wahl S, Hoffmann C, Qian K, Rönn T, Riess H, Müller-Nurasyid M, Bretschneider N, Schroeder T, Skurk T, Horsthemke B; DIAGRAM+Consortium, Spieler D, Klingenspor M, Seifert M, Kern MJ, Mejhert N, Dahlman I, Hansson O, Hauck SM, Blüher M, Arner P, Groop L, Illig T, Suhre K, Hsu YH, Mellgren G, Hauner H, Laumen H. Leveraging cross-species transcription factor binding site patterns: from diabetes risk loci to disease mechanisms. Cell, 2014. 156(1-2):343-58.

288. Saunders EJ, Dadaev T, Leongamornlert DA, Jugurnauth-Little S, Tymrakiewicz M, Wiklund F, Al Olama AA, Benlloch S, Neal DE, Hamdy FC, Donovan JL, Giles GG, Severi G, Gronberg H, Aly M, Haiman CA, Schumacher F, Henderson BE, Lindstrom S, Kraft P, Hunter DJ, Gapstur S, Chanock S, Berndt SI, Albanes D, Andriole G, Schleutker J, Weischer M, Nordestgaard BG, Canzian F, Campa D, Riboli E, Key TJ, Travis RC, Ingles SA, John EM, Hayes RB, Pharoah P, Khaw KT, Stanford JL, Ostrander EA, Signorello LB, Thibodeau SN, Schaid D, Maier C, Kibel AS, Cybulski C, Cannon-Albright L, Brenner H, Park JY, Kaneva R, Batra J, Clements JA, Teixeira MR, Xu J, Mikropoulos C, Goh C, Govindasami K, Guy M, Wilkinson RA, Sawyer EJ, Morgan A; COGS-CRUK GWAS-ELLIPSE (Part of GAME-ON) Initiative; UK Genetic Prostate Cancer Study Collaborators; UK ProtecT Study Collaborators; PRACTICAL Consortium, Easton DF, Muir K, Eeles RA, Kote-Jarai Z. Fine-mapping the HOXB region detects common variants tagging a rare coding allele: evidence for synthetic association in prostate cancer. PLoS Genet, 2014. 10(2):E1004129.

289. Ghosh A, Hartge P, Kraft P, Joshi AD, Ziegler RG, Barrdahl M, Chanock SJ, Wacholder S, Chatterjee N. Leveraging family history in population-based case-control association studies. Genet Epidemiol, 2014. 38(2):114-22.

290. DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium. Genome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility. Nat Genet, 2014. 46(3):234-44.

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291. Graff RE, Cho E, Lindström S, Kraft P, Willett WC, Eliassen AH. Premenopausal plasma ferritin levels, HFE polymorphisms, and risk of breast cancer in the Nurses' Health Study II. Cancer Epidemiol Biomarkers Prev, 2014. 23(3):516-24.

292. Woo D, Falcone GJ, Devan WJ, Brown WM, Biffi A, Howard TD, Anderson CD, Brouwers HB, Valant V, Battey TW, Radmanesh F, Raffeld MR, Baedorf-Kassis S, Deka R, Woo JG, Martin LJ, Haverbusch M, Moomaw CJ, Sun G, Broderick JP, Flaherty ML, Martini SR, Kleindorfer DO, Kissela B, Comeau ME, Jagiella JM, Schmidt H, Freudenberger P, Pichler A, Enzinger C, Hansen BM, Norrving B, Jimenez-Conde J, Giralt-Steinhauer E, Elosua R, Cuadrado-Godia E, Soriano C, Roquer J, Kraft P, Ayres AM, Schwab K, McCauley JL, Pera J, Urbanik A, Rost NS, Goldstein JN, Viswanathan A, Stögerer EM, Tirschwell DL, Selim M, Brown DL, Silliman SL, Worrall BB, Meschia JF, Kidwell CS, Montaner J, Fernandez-Cadenas I, Delgado P, Malik R, Dichgans M, Greenberg SM, Rothwell PM, Lindgren A, Slowik A, Schmidt R, Langefeld CD, Rosand J; on behalf of the International Stroke Genetics Consortium. Meta-analysis of genome-wide association studies identifies 1q22 as a susceptibility locus for intracerebral hemorrhage. Am J Hum Genet, 2014. 94(4):511-21.

293. Figueroa JD, Han SS, Garcia-Closas M, Baris D, Jacobs EJ, Kogevinas M, Schwenn M, Malets N, Johnson A, Purdue MP, Caporaso N, Landi MT, Prokunina-Olsson L, Wang Z, Hutchinson A, Burdette L, Wheeler W, Vineis P, Siddiq A, Cortessis VK, Kooperberg C, Cussenot O, Benhamou S, Prescott J, Porru S, Bueno-de-Mesquita HB, Trichopoulos D, Ljungberg B, Clavel-Chapelon F, Weiderpass E, Krogh V, Dorronsoro M, Travis R, Tjønneland A, Brenan P, Chang-Claude J, Riboli E, Conti DV, Gago-Dominguez M, Stern MC, Pike MC, Van Den Berg D, Yuan JM, Hohensee C, Rodabough R, Cancel-Tassin G, Roupret M, Comperat E, Chen C, De Vivo I, Giovannucci E, Hunter DJ, Kraft P, Lindstrom S, Carta A, Pavanello S, Arici C, Mastrangelo G, Karagas MR, Schned A, Armenti KR, Hosain M, Haiman CA, Fraumeni JF Jr, Chanock SJ, Chatterjee N, Rothman N, Silverman DT. Genome-wide interaction study of smoking and bladder cancer risk. Carcinogenesis, 2014. 35(8):1737-44.

294. Vanderweele TJ, Tchetgen Tchetgen EJ, Cornelis M, Kraft P. Methodological challenges in Mendelian Randomization. Epidemiology, 2014. 25(3):427-35.

295. Aschard H, Vilhjalmsson BJ, Greliche N, Morange PE, Tregouet DA, Kraft P. Maximizing the power of principal-component analysis of correlated phenotypes in genome-wide association studies. Am J Hum Genet, 2014. 94(5):662-76.

296. Saxena R, Bjonnes A, Prescott J, Dib P, Natt P, Lane J, Lerner M, Cooper JA, Ye Y, Li KW, Maubaret CG, Codd V, Brackett D, Mirabello L, Kraft P, Dinney CP, Stowell D, Peyton M, Ralhan S, Wander GS, Mehra NK, Salpea KD, Gu J, Wu X, Mangino M, Hunter DJ, De Vivo I, Humphries SE, Samani NJ, Spector TD, Savage SA, Sanghera DK. A Genome-Wide Association Study Identifies Variants in Casein Kinase II (CSNK2A2) to be Associated with Leukocyte Telomere Length in a Punjabi Sikh Diabetic Cohort. Cir Cardiovasc Genet, 2014. 7(3):287-95.

297. Barrdahl M, Canzian F, Joshi AD, Travis RC, Chang-Claude J, Auer PL, Gapstur SM, Gaudet M, Diver

WR, Henderson BE, Haiman CA, Schumacher FR, Le Marchand L, Berg CD, Chanock SJ, Hoover RN, Rudolph A, Ziegler RG, Giles GG, Baglietto L, Severi G, Hankinson SE, Lindström S, Willet W, Hunter DJ, Buring JE, Lee IM, Zhang S, Dossus L, Cox DG, Khaw KT, Lund E, Naccarati A, Peeters PH, Quirós JR, Riboli E, Sund M, Trichopoulos D, Prentice RL, Kraft P, Kaaks R, Campa D. Post-GWAS gene-environment interplay in breast cancer: results from the Breast and Prostate Cancer Cohort Consortium and a meta-analysis on 79 000 women. Hum Mol Genet, 2014. 23(19):5260-70.

298. Cao Y, Lindström S, Schumacher F, Stevens VL, Albanes D, Berndt SI, Boeing H, Bas Bueno-de-Mesquita H, Canzian F, Chamosa S, Chanock SJ, Diver WR, Gapstur SM, Gaziano JM, Giovannucci EL, Haiman CA, Henderson B, Johansson M, Marchand LL, Palli D, Rosner B, Siddiq A, Stampfer M, Stram DO, Tamimi R, Travis RC, Trichopoulos D, Willett WC, Yeager M, Kraft P, Hsing AW, Pollak M, Lin X, Ma J. Insulin-like Growth Factor Pathway Genetic Polymorphisms, Circulating IGF1 and IGFBP3, and Prostate Cancer Survival. J Natl Cancer Inst, 2014. 106(6):pii: dju085.

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299. Setiawan VW, Schumacher F, Prescott J, Haessler J, Malinowski J, Wentzensen N, Yang H, Chanock S, Brinton L, Hartge P, Lissowska J, Park SL, Cheng I, Bush WS, Crawford DC, Ursin G, Horn-Ross P, Bernstein L, Lu L, Risch H, Yu H, Sakoda LC, Doherty J, Chen C, Jackson R, Yasmeen S, Cote M, Kocarnik JM, Peters U, Kraft P, De Vivo I, Haiman CA, Kooperberg C, Le Marchand L. Cross-cancer pleiotropic analysis of endometrial cancer: PAGE and E2C2 consortia. Carcinogenesis, 2014. 35(9):2068-73.

300. Li Q, Stram A, Chen C, Kar S, Gayther S, Pharoah P, Haiman C, Stranger B, Kraft P, Freedman ML. Expression QTL-based analyses reveal candidate causal genes and loci across five tumor types. Hum Mol Genet, 2014. 23(19):5294-302.

301. Yoo S, Pettersson A, Jordahl KM, Lis RT, Lindstrom S, Meisner A, Nuttall EJ, Stack EC, Stampfer MJ, Kraft P, Brown M, Loda M, Giovannucci EL, Kantoff PW, Mucci LA. Androgen receptor CAG repeat polymorphism and risk of TMPRSS2:ERG positive prostate cancer. Cancer Epidemiol Biomarkers Prev, 2014. 23(10):2027-31.

302. Ng MC, Shriner D, Chen BH, Li J, Chen WM, Guo X, Liu J, Bielinski SJ, Yanek LR, Nalls MA, Comeau ME, Rasmussen-Torvik LJ, Jensen RA, Evans DS, Sun YV, An P, Patel SR, Lu Y, Long J, Armstrong LL, Wagenknecht L, Yang L, Snively BM, Palmer ND, Mudgal P, Langefeld CD, Keene KL, Freedman BI, Mychaleckyj JC, Nayak U, Raffel LJ, Goodarzi MO, Chen YD, Taylor HA Jr, Correa A, Sims M, Couper D, Pankow JS, Boerwinkle E, Adeyemo A, Doumatey A, Chen G, Mathias RA, Vaidya D, Singleton AB, Zonderman AB, Igo RP Jr, Sedor JR; FIND Consortium, Kabagambe EK, Siscovick DS, McKnight B, Rice K, Liu Y, Hsueh WC, Zhao W, Bielak LF, Kraja A, Province MA, Bottinger EP, Gottesman O, Cai Q, Zheng W, Blot WJ, Lowe WL, Pacheco JA, Crawford DC; eMERGE Consortium; DIAGRAM Consortium, Grundberg E; MuTHER Consortium, Rich SS, Hayes MG, Shu XO, Loos RJ, Borecki IB, Peyser PA, Cummings SR, Psaty BM, Fornage M, Iyengar SK, Evans MK, Becker DM, Kao WH, Wilson JG, Rotter JI, Sale MM, Liu S, Rotimi CN, Bowden DW; MEta-analysis of type 2 DIabetes in African Americans Consortium. Meta-analysis of genome-wide association studies in African Americans provides insights into the genetic architecture of type 2 diabetes. PLoS Genet, 2014. 10(8):e1004517.

303. Vassy JL, Lautenbach DM, McLaughlin HM, Kong SW, Christensen KD, Krier J, Kohane IS, Feuerman LZ, Blumenthal-Barby J, Roberts JS, Lehmann LS, Ho CY, Ubel PA, MacRae CA, Seidman CE, Murray MF, McGuire AL, Rehm HL, Green RC; MedSeq Project. The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine. Trials, 2014. 15:85.

304. Wolpin BM, Rizzato C, Kraft P, Kooperberg C, Petersen GM, Wang Z, Arslan AA, Beane-Freeman L, Bracci PM, Buring J, Canzian F, Duell EJ, Gallinger S, Giles GG, Goodman GE, Goodman PJ, Jacobs EJ, Kamineni A, Klein AP, Kolonel LN, Kulke MH, Li D, Malats N, Olson SH, Risch HA, Sesso HD, Visvanathan K, White E, Zheng W, Abnet CC, Albanes D, Andreotti G, Austin MA, Barfield R, Basso D, Berndt SI, Boutron-Ruault MC, Brotzman M, Büchler MW, Bueno-de-Mesquita HB, Bugert P, Burdette L, Campa D, Caporaso NE, Capurso G, Chung C, Cotterchio M, Costello E, Elena J, Funel N, Gaziano JM, Giese NA, Giovannucci EL, Goggins M, Gorman MJ, Gross M, Haiman CA, Hassan M, Helzlsouer KJ, Henderson BE, Holly EA, Hu N, Hunter DJ, Innocenti F, Jenab M, Kaaks R, Key TJ, Khaw KT, Klein EA, Kogevinas M, Krogh V, Kupcinskas J, Kurtz RC, LaCroix A, Landi MT, Landi S, Le Marchand L, Mambrini A, Mannisto S, Milne RL, Nakamura Y, Oberg AL, Owzar K, Patel AV, Peeters PH, Peters U, Pezzilli R, Piepoli A, Porta M, Real FX, Riboli E, Rothman N, Scarpa A, Shu XO, Silverman DT, Soucek P, Sund M, Talar-Wojnarowska R, Taylor PR, Theodoropoulos GE, Thornquist M, Tjønneland A, Tobias GS, Trichopoulos D, Vodicka P, Wactawski-Wende J, Wentzensen N, Wu C, Yu H, Yu K, Zeleniuch-Jacquotte A, Hoover R, Hartge P, Fuchs C, Chanock SJ, Stolzenberg-Solomon RS, Amundadottir LT. Genome-wide association study identifies multiple susceptibility loci for pancreatic cancer. Nat Genet, 2014. 46(9):994-1000.

305. Wu C, Wang Z, Song X, Feng XS, Abnet CC, He J, Hu N, Zuo XB, Tan W, Zhan Q, Hu Z, He Z, Jia W, Zhou Y, Yu K, Shu XO, Yuan JM, Zheng W, Zhao XK, Gao SG, Yuan ZQ, Zhou FY, Fan ZM, Cui JL, Lin HL, Han XN, Li B, Chen X, Dawsey SM, Liao L, Lee MP, Ding T, Qiao YL, Liu Z, Liu Y, Yu D,

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Chang J, Wei L, Gao YT, Koh WP, Xiang YB, Tang ZZ, Fan JH, Han JJ, Zhou SL, Zhang P, Zhang DY, Yuan Y, Huang Y, Liu C, Zhai K, Qiao Y, Jin G, Guo C, Fu J, Miao X, Lu C, Yang H, Wang C, Wheeler WA, Gail M, Yeager M, Yuenger J, Guo ET, Li AL, Zhang W, Li XM, Sun LD, Ma BG, Li Y, Tang S, Peng XQ, Liu J, Hutchinson A, Jacobs K, Giffen C, Burdette L, Fraumeni JF Jr, Shen H, Ke Y, Zeng Y, Wu T, Kraft P, Chung CC, Tucker MA, Hou ZC, Liu YL, Hu YL, Liu Y, Wang L, Yuan G, Chen LS, Liu X, Ma T, Meng H, Sun L, Li XM, Li XM, Ku JW, Zhou YF, Yang LQ, Wang Z, Li Y, Qige Q, Yang WJ, Lei GY, Chen LQ, Li EM, Yuan L, Yue WB, Wang R, Wang LW, Fan XP, Zhu FH, Zhao WX, Mao YM, Zhang M, Xing GL, Li JL, Han M, Ren JL, Liu B, Ren SW, Kong QP, Li F, Sheyhidin I, Wei W, Zhang YR, Feng CW, Wang J, Yang YH, Hao HZ, Bao QD, Liu BC, Wu AQ, Xie D, Yang WC, Wang L, Zhao XH, Chen SQ, Hong JY, Zhang XJ, Freedman ND, Goldstein AM, Lin D, Taylor PR, Wang LD, Chanock SJ. Joint analysis of three genome-wide association studies of esophageal squamous cell carcinoma in Chinese populations. Nat Genet, 2014. 46(9):1001-6.

306. Liu CT, Buchkovich ML, Winkler TW, Heid IM; African Ancestry Anthropometry Genetics Consortium; GIANT Consortium, Borecki IB, Fox CS, Mohlke KL, North KE, Adrienne Cupples L. Multi-ethnic fine-mapping of 14 central adiposity loci. Hum Mol Genet, 2014. 23(17):4738-44.

307. Song F, Amos CI, Lee JE, Lian CG, Fang S, Liu H, MacGregor S, Iles MM, Law MH, Lindeman NI, Montgomery GW, Duffy DL, Cust AE, Jenkins MA, Whiteman DC, Kefford RF, Giles GG, Armstrong BK, Aitken JF, Hopper JL, Brown KM, Martin NG, Mann GJ, Bishop DT, Bishop JA; GenoMEL consortium, Kraft P, Qureshi AA, Kanetsky PA, Hayward NK, Hunter DJ, Wei Q, Han J. Identification of a melanoma susceptibility locus and somatic mutation in TET2. Carcinogenesis, 2014. 35(9):2097-101.

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345. Germain M, Chasman DI, de Haan H, Tang W, Lindström S, Weng LC, de Andrade M, de Visser MC, Wiggins KL, Suchon P, Saut N, Smadja DM, Le Gal G, van Hylckama Vlieg A, Di Narzo A, Hao K, Nelson CP, Rocanin-Arjo A, Folkersen L, Monajemi R, Rose LM, Brody JA, Slagboom E, Aïssi D, Gagnon F, Deleuze JF, Deloukas P, Tzourio C, Dartigues JF, Berr C, Taylor KD, Civelek M, Eriksson P; Cardiogenics Consortium, Psaty BM, Houwing-Duitermaat J, Goodall AH, Cambien F, Kraft P, Amouyel P, Samani NJ, Basu S, Ridker PM, Rosendaal FR, Kabrhel C, Folsom AR, Heit J, Reitsma PH, Trégouët DA, Smith NL, Morange PE. Meta-analysis of 65,734 individuals identifies TSPAN15 and SLC44A2 as two susceptibility loci for venous thromboembolism. Am J Hum Genet, 2015. 96(4):532-542.

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351. Chen CY, Han J, Hunter DJ, Kraft P, Price AL. Explicit Modeling of Ancestry Improves Polygenic Risk Scores and BLUP Prediction. Genet Epidemiol, 2015 May 21. Epub ahead of print.

352. Sisti JS, Lindström S, Kraft P, Tamimi RM, Rosner BA, Wu T, Willett WC, Eliassen AH. Premenopausal plasma carotenoids, fluorescent oxidation products, and subsequent breast cancer risk in the nurses' health studies. Breast Cancer Res Treat, 2015. 151(2):415-425.

353. Khalili H, Gong J, Brenner H, Austin TR, Hutter CM, Baba Y, Baron JA, Berndt SI, Bézieau S, Caan B, Campbell PT, Chang-Claude J, Chanock SJ, Chen C, Hsu L, Jiao S, Conti DV, Duggan D, Fuchs CS, Gala M, Gallinger S, Haile RW, Harrison TA, Hayes R, Hazra A, Henderson B, Haiman C, Hoffmeister M, Hopper JL, Jenkins MA, Kolonel LN, Küry S, LaCroix A, Marchand LL, Lemire M, Lindor NM, Ma J, Manson JE, Morikawa T, Nan H, Ng K, Newcomb PA, Nishihara R, Potter JD, Qu C, Schoen RE, Schumacher FR, Seminara D, Taverna D, Thibodeau S, Wactawski-Wende J, White E, Wu K, Zanke BW, Casey G, Hudson TJ, Kraft P, Peters U, Slattery ML, Ogino S, Chan AT; GECCO and CCFR. Identification of a common variant with potential pleiotropic effect on risk of inflammatory bowel disease and colorectal cancer. Carcinogenesis, 2015 Jun 12. Epub ahead of print.

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358. Bao Y, Curhan G, Merriman T, Plenge R, Kraft P, Choi HK. Lack of gene-diuretic interactions on the risk of incident gout: the Nurses' Health Study and Health Professionals Follow-up Study. Ann Rheum Dis, 2015. 74(7):1394-1398.

359. Zhang C, Doherty JA, Burgess S, Hung RJ, Lindström S, Kraft P, Gong J, Amos CI, Sellers TA, Monteiro AN, Chenevix-Trench G, Bickeböller H, Risch A, Brennan P, Mckay JD, Houlston RS, Landi MT, Timofeeva MN, Wang Y, Heinrich J, Kote-Jarai Z, Eeles RA, Muir K, Wiklund F, Grönberg H, Berndt SI, Chanock SJ, Schumacher F, Haiman CA, Henderson BE, Amin Al Olama A, Andrulis IL, Hopper JL, Chang-Claude J, John EM, Malone KE, Gammon MD, Ursin G, Whittemore AS, Hunter DJ, Gruber SB, Knight JA, Hou L, Le Marchand L, Newcomb PA, Hudson TJ, Chan AT, Li L, Woods MO, Ahsan H, Pierce BL; GECCO and the GAME-ON Network: CORECT, DRIVE, ELLIPSE, FOCI, and TRICL. Genetic determinants of telomere length and risk of common cancers: a Mendelian randomization study. Hum Mol Genet, 2015 Jul 2. Epub ahead of print.

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384. Yuan C, Clish CB, Wu C, Mayers JR, Kraft P, Townsend MK, Zhang M, Tworoger SS, Bao Y, Qian ZR, Rubinson DA, Ng K, Giovannucci EL, Ogino S, Stampfer MJ, Gaziano JM, Ma J, Sesso HD, Anderson GL, Cochrane BB, Manson JE, Torrence ME, Kimmelman AC, Amundadottir LT, Vander Heiden MG, Fuchs CS, Wolpin BM. Circulating Metabolites and Survival Among Patients With Pancreatic Cancer. J Natl Cancer Inst. 2016 Jan 11;108(6).

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386. Carere DA, Kraft P, Kaphingst KA, Roberts JS, Green RC. Consumers report lower confidence in their genetics knowledge following direct-to-consumer personal genomic testing. Genet Med. 2016 Jan;18(1):65-72.

387. Rand KA, Rohland N, Tandon A, Stram A, Sheng X, Do R, Pasaniuc B, Allen A, Quinque D, Mallick S, Le Marchand L, Kaggwa S, Lubwama A; African Ancestry Prostate Cancer GWAS Consortium; ELLIPSE/GAME-ON Consortium, Stram DO, Watya S, Henderson BE, Conti DV, Reich D, Haiman CA. Whole-exome sequencing of over 4100 men of African ancestry and prostate cancer risk. Hum Mol Genet. 2016 Jan;25(2):371-81.

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396. Siiskonen SJ, Zhang M, Li WQ, Liang L, Kraft P, Nijsten T, Han J, Qureshi AA. A Genome-Wide Association Study of Cutaneous Squamous Cell Carcinoma among European Descendants. Cancer Epidemiol Biomarkers Prev. 2016 Apr;25(4):714-20.

397. Gusev A, Shi H, Kichaev G, Pomerantz M, Li F, Long HW, Ingles SA, Kittles RA, Strom SS, Rybicki BA, Nemesure B, Isaacs WB, Zheng W, Pettaway CA, Yeboah ED, Tettey Y, Biritwum RB, Adjei AA, Tay E, Truelove A, Niwa S, Chokkalingam AP, John EM, Murphy AB, Signorello LB, Carpten J, Leske MC, Wu SY, Hennis AJ, Neslund-Dudas C, Hsing AW, Chu L, Goodman PJ, Klein EA, Witte JS, Casey G, Kaggwa S, Cook MB, Stram DO, Blot WJ, Eeles RA, Easton D, Kote-Jarai Z, Al Olama AA, Benlloch S, Muir K, Giles GG, Southey MC, Fitzgerald LM, Gronberg H, Wiklund F, Aly M, Henderson BE, Schleutker J, Wahlfors T, Tammela TL, Nordestgaard BG, Key TJ, Travis RC, Neal DE, Donovan JL, Hamdy FC, Pharoah P, Pashayan N, Khaw KT, Stanford JL, Thibodeau SN, McDonnell SK, Schaid DJ, Maier C, Vogel W, Luedeke M, Herkommer K, Kibel AS, Cybulski C, Wokolorczyk D, Kluzniak W, Cannon-Albright L, Teerlink C, Brenner H, Dieffenbach AK, Arndt V, Park JY, Sellers TA, Lin HY, Slavov C, Kaneva R, Mitev V, Batra J, Spurdle A, Clements JA, Teixeira MR, Pandha H, Michael A, Paulo P, Maia S, Kierzek A; PRACTICAL consortium, Conti DV, Albanes D, Berg C, Berndt SI, Campa D, Crawford ED, Diver WR, Gapstur SM, Gaziano JM, Giovannucci E, Hoover R, Hunter DJ, Johansson M, Kraft P, Le Marchand L, Lindström S, Navarro C, Overvad K, Riboli E, Siddiq A, Stevens VL, Trichopoulos D, Vineis P, Yeager M, Trynka G, Raychaudhuri S, Schumacher FR, Price AL, Freedman ML, Haiman CA, Pasaniuc B. Atlas of prostate cancer heritability in European and African-American men pinpoints tissue-specific regulation. Nat Commun. 2016 Apr;7:10979.

398. Machiela MJ, Lan Q, Slager SL, Vermeulen RC, Teras LR, Camp NJ, Cerhan JR, Spinelli JJ, Wang SS, Nieters A, Vijai J, Yeager M, Wang Z, Ghesquières H, McKay J, Conde L, de Bakker PI, Cox DG, Burdett L, Monnereau A, Flowers CR, De Roos AJ, Brooks-Wilson AR, Giles GG, Melbye M, Gu J, Jackson RD, Kane E, Purdue MP, Vajdic CM, Albanes D, Kelly RS, Zucca M, Bertrand KA, Zeleniuch-Jacquotte A, Lawrence C, Hutchinson A, Zhi D, Habermann TM, Link BK, Novak AJ, Dogan A, Asmann YW, Liebow M, Thompson CA, Ansell SM, Witzig TE, Tilly H, Haioun C, Molina TJ, Hjalgrim H, Glimelius B, Adami HO, Roos G, Bracci PM, Riby J, Smith MT, Holly EA, Cozen W, Hartge P, Morton LM, Severson RK, Tinker LF, North KE, Becker N, Benavente Y, Boffetta P, Brennan P, Foretova L, Maynadie M, Staines A, Lightfoot T, Crouch S, Smith A, Roman E, Diver WR, Offit K, Zelenetz A, Klein RJ, Villano DJ, Zheng T, Zhang Y, Holford TR, Turner J, Southey MC, Clavel J, Virtamo J, Weinstein S, Riboli E, Vineis P, Kaaks R, Boeing H, Tjønneland A, Angelucci E, Di Lollo S, Rais M, De Vivo I, Giovannucci E, Kraft P, Huang J, Ma B, Ye Y, Chiu BC, Liang L, Park JH, Chung CC, Weisenburger DD, Fraumeni JF Jr, Salles G, Glenn M, Cannon-Albright L, Curtin K, Wu X, Smedby KE, de Sanjose S, Skibola CF, Berndt SI, Birmann BM, Chanock SJ, Rothman N.

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Genetically predicted longer telomere length is associated with increased risk of B-cell lymphoma subtypes. Hum Mol Genet. 2016 Apr;25(8):1663-76.

399. Couch FJ, Kuchenbaecker KB, Michailidou K, Mendoza-Fandino GA, Nord S, Lilyquist J, Olswold C, Hallberg E, Agata S, Ahsan H, Aittomäki K, Ambrosone C, Andrulis IL, Anton-Culver H, Arndt V, Arun BK, Arver B, Barile M, Barkardottir RB, Barrowdale D, Beckmann L, Beckmann MW, Benitez J, Blank SV, Blomqvist C, Bogdanova NV, Bojesen SE, Bolla MK, Bonanni B, Brauch H, Brenner H, Burwinkel B, Buys SS, Caldes T, Caligo MA, Canzian F, Carpenter J, Chang-Claude J, Chanock SJ, Chung WK, Claes KB, Cox A, Cross SS, Cunningham JM, Czene K, Daly MB, Damiola F, Darabi H, de la Hoya M, Devilee P, Diez O, Ding YC, Dolcetti R, Domchek SM, Dorfling CM, Dos-Santos-Silva I, Dumont M, Dunning AM, Eccles DM, Ehrencrona H, Ekici AB, Eliassen H, Ellis S, Fasching PA, Figueroa J, Flesch-Janys D, Försti A, Fostira F, Foulkes WD, Friebel T, Friedman E, Frost D, Gabrielson M, Gammon MD, Ganz PA, Gapstur SM, Garber J, Gaudet MM, Gayther SA, Gerdes AM, Ghoussaini M, Giles GG, Glendon G, Godwin AK, Goldberg MS, Goldgar DE, González-Neira A, Greene MH, Gronwald J, Guénel P, Gunter M, Haeberle L, Haiman CA, Hamann U, Hansen TV, Hart S, Healey S, Heikkinen T, Henderson BE, Herzog J, Hogervorst FB, Hollestelle A, Hooning MJ, Hoover RN, Hopper JL, Humphreys K, Hunter DJ, Huzarski T, Imyanitov EN, Isaacs C, Jakubowska A, James P, Janavicius R, Jensen UB, John EM, Jones M, Kabisch M, Kar S, Karlan BY, Khan S, Khaw KT, Kibriya MG, Knight JA, Ko YD, Konstantopoulou I, Kosma VM, Kristensen V, Kwong A, Laitman Y, Lambrechts D, Lazaro C, Lee E, Le Marchand L, Lester J, Lindblom A, Lindor N, Lindstrom S, Liu J, Long J, Lubinski J, Mai PL, Makalic E, Malone KE, Mannermaa A, Manoukian S, Margolin S, Marme F, Martens JW, McGuffog L, Meindl A, Miller A, Milne RL, Miron P, Montagna M, Mazoyer S, Mulligan AM, Muranen TA, Nathanson KL, Neuhausen SL, Nevanlinna H, Nordestgaard BG, Nussbaum RL, Offit K, Olah E, Olopade OI, Olson JE, Osorio A, Park SK, Peeters PH, Peissel B, Peterlongo P, Peto J, Phelan CM, Pilarski R, Poppe B, Pylkäs K, Radice P, Rahman N, Rantala J, Rappaport C, Rennert G, Richardson A, Robson M, Romieu I, Rudolph A, Rutgers EJ, Sanchez MJ, Santella RM, Sawyer EJ, Schmidt DF, Schmidt MK, Schmutzler RK, Schumacher F, Scott R, Senter L, Sharma P, Simard J, Singer CF, Sinilnikova OM, Soucy P, Southey M, Steinemann D, Stenmark-Askmalm M, Stoppa-Lyonnet D, Swerdlow A, Szabo CI, Tamimi R, Tapper W, Teixeira MR, Teo SH, Terry MB, Thomassen M, Thompson D, Tihomirova L, Toland AE, Tollenaar RA, Tomlinson I, Truong T, Tsimiklis H, Teulé A, Tumino R, Tung N, Turnbull C, Ursin G, van Deurzen CH, van Rensburg EJ, Varon-Mateeva R, Wang Z, Wang-Gohrke S, Weiderpass E, Weitzel JN, Whittemore A, Wildiers H, Winqvist R, Yang XR, Yannoukakos D, Yao S, Zamora MP, Zheng W, Hall P, Kraft P, Vachon C, Slager S, Chenevix-Trench G, Pharoah PD, Monteiro AA, García-Closas M, Easton DF, Antoniou AC. Identification of four novel susceptibility loci for oestrogen receptor negative breast cancer. Nat Commun. 2016 Apr;7:11375.

400. Penney KL, Pettersson A, Shui IM, Graff RE, Kraft P, Lis RT, Sesso HD, Loda M, Mucci LA. Association of Prostate Cancer Risk Variants with TMPRSS2:ERG Status: Evidence for Distinct Molecular Subtypes. Cancer Epidemiol Biomarkers Prev. 2016 May;25(5):745-9.

401. Townsend MK, Bao Y, Poole EM, Bertrand KA, Kraft P, Wolpin BM, Clish CB, Tworoger SS. Impact of Pre-analytic Blood Sample Collection Factors on Metabolomics. Cancer Epidemiol Biomarkers Prev. 2016 May;25(5):823-9.

402. Zhao Z, Wen W, Michailidou K, Bolla MK, Wang Q, Zhang B, Long J, Shu XO, Schmidt MK, Milne RL, García-Closas M, Chang-Claude J, Lindstrom S, Bojesen SE, Ahsan H, Aittomäki K, Andrulis IL, Anton-Culver H, Arndt V, Beckmann MW, Beeghly-Fadiel A, Benitez J, Blomqvist C, Bogdanova NV, Børresen-Dale AL, Brand J, Brauch H, Brenner H, Burwinkel B, Cai Q, Casey G, Chenevix-Trench G, Couch FJ, Cox A, Cross SS, Czene K, Dörk T, Dumont M, Fasching PA, Figueroa J, Flesch-Janys D, Fletcher O, Flyger H, Fostira F, Gammon M, Giles GG, Guénel P, Haiman CA, Hamann U, Harrington P, Hartman M, Hooning MJ, Hopper JL, Jakubowska A, Jasmine F, John EM, Johnson N, Kabisch M, Khan S, Kibriya M, Knight JA, Kosma VM, Kriege M, Kristensen V, Le Marchand L, Lee E, Li J, Lindblom A, Lophatananon A, Luben R, Lubinski J, Malone KE, Mannermaa

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A, Manoukian S, Margolin S, Marme F, McLean C, Meijers-Heijboer H, Meindl A, Miao H, Muir K, Neuhausen SL, Nevanlinna H, Neven P, Olson JE, Perkins B, Peterlongo P, Phillips KA, Pylkäs K, Rudolph A, Santella R, Sawyer EJ, Schmutzler RK, Schoemaker M, Shah M, Shrubsole M, Southey MC, Swerdlow AJ, Toland AE, Tomlinson I, Torres D, Truong T, Ursin G, Van Der Luijt RB, Verhoef S, Wang-Gohrke S, Whittemore AS, Winqvist R, Pilar Zamora M, Zhao H, Dunning AM, Simard J, Hall P, Kraft P, Pharoah P, Hunter D, Easton DF, Zheng W. Association of genetic susceptibility variants for type 2 diabetes with breast cancer risk in women of European ancestry. Cancer Causes Control. 2016 May;27(5):679-93.

403. Li H, Feng B, Miron A, Chen X, Beesley J, Bimeh E, Barrowdale D, John EM, Daly MB, Andrulis IL, Buys SS, Kraft P; kConFab investigators, Thorne H, Chenevix-Trench G, Southey MC, Antoniou AC, James PA, Terry MB, Phillips KA, Hopper JL, Mitchell G, Goldgar DE. Breast cancer risk prediction using a polygenic risk score in the familial setting: a prospective study from the Breast Cancer Family Registry and kConFab. Genet Med. 2016 May 12 [Epub ahead of print].

404. Maas P, Barrdahl M, Joshi AD, Auer PL, Gaudet MM, Milne RL, Schumacher FR, Anderson WF, Check D, Chattopadhyay S, Baglietto L, Berg CD, Chanock SJ, Cox DG, Figueroa JD, Gail MH, Graubard BI, Haiman CA, Hankinson SE, Hoover RN, Isaacs C, Kolonel LN, Le Marchand L, Lee IM, Lindström S, Overvad K, Romieu I, Sanchez MJ, Southey MC, Stram DO, Tumino R, VanderWeele TJ, Willett WC, Zhang S, Buring JE, Canzian F, Gapstur SM, Henderson BE, Hunter DJ, Giles GG, Prentice RL, Ziegler RG, Kraft P, Garcia-Closas M, Chatterjee N. Breast Cancer Risk From Modifiable and Nonmodifiable Risk Factors Among White Women in the United States. JAMA Oncol. 2016 May 26 [Epub ahead of print].

405. Cornelis MC, Flint A, Field AE, Kraft P, Han J, Rimm EB, van Dam RM. A genome-wide investigation of food addiction. Obesity (Silver Spring). 2016 Jun;24(6):1336-41.

406. Okbay A, Baselmans BM, De Neve JE, Turley P, Nivard MG, Fontana MA, Meddens SF, Linnér RK, Rietveld CA, Derringer J, Gratten J, Lee JJ, Liu JZ, de Vlaming R, Ahluwalia TS, Buchwald J, Cavadino A, Frazier-Wood AC, Furlotte NA, Garfield V, Geisel MH, Gonzalez JR, Haitjema S, Karlsson R, van der Laan SW, Ladwig KH, Lahti J, van der Lee SJ, Lind PA, Liu T, Matteson L, Mihailov E, Miller MB, Minica CC, Nolte IM, Mook-Kanamori D, van der Most PJ, Oldmeadow C, Qian Y, Raitakari O, Rawal R, Realo A, Rueedi R, Schmidt B, Smith AV, Stergiakouli E, Tanaka T, Taylor K, Wedenoja J, Wellmann J, Westra HJ, Willems SM, Zhao W; LifeLines Cohort Study, Amin N, Bakshi A, Boyle PA, Cherney S, Cox SR, Davies G, Davis OS, Ding J, Direk N, Eibich P, Emeny RT, Fatemifar G, Faul JD, Ferrucci L, Forstner A, Gieger C, Gupta R, Harris TB, Harris JM, Holliday EG, Hottenga JJ, De Jager PL, Kaakinen MA, Kajantie E, Karhunen V, Kolcic I, Kumari M, Launer LJ, Franke L, Li-Gao R, Koini M, Loukola A, Marques-Vidal P, Montgomery GW, Mosing MA, Paternoster L, Pattie A, Petrovic KE, Pulkki-Råback L, Quaye L, Räikkönen K, Rudan I, Scott RJ, Smith JA, Sutin AR, Trzaskowski M, Vinkhuyzen AE, Yu L, Zabaneh D, Attia JR, Bennett DA, Berger K, Bertram L, Boomsma DI, Snieder H, Chang SC, Cucca F, Deary IJ, van Duijn CM, Eriksson JG, Bültmann U, de Geus EJ, Groenen PJ, Gudnason V, Hansen T, Hartman CA, Haworth CM, Hayward C, Heath AC, Hinds DA, Hyppönen E, Iacono WG, Järvelin MR, Jöckel KH, Kaprio J, Kardia SL, Keltikangas-Järvinen L, Kraft P, Kubzansky LD, Lehtimäki T, Magnusson PK, Martin NG, McGue M, Metspalu A, Mills M, de Mutsert R, Oldehinkel AJ, Pasterkamp G, Pedersen NL, Plomin R, Polasek O, Power C, Rich SS, Rosendaal FR, den Ruijter HM, Schlessinger D, Schmidt H, Svento R, Schmidt R, Alizadeh BZ, Sørensen TI, Spector TD, Steptoe A, Terracciano A, Thurik AR, Timpson NJ, Tiemeier H, Uitterlinden AG, Vollenweider P, Wagner GG, Weir DR, Yang J, Conley DC, Smith GD, Hofman A, Johannesson M, Laibson DI, Medland SE, Meyer MN, Pickrell JK, Esko T, Krueger RF, Beauchamp JP, Koellinger PD, Benjamin DJ, Bartels M, Cesarini D. Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses. Nat Genet. 2016 Jun;48(6):624-33.

407. Gao C, Patel CJ, Michailidou K, Peters U, Gong J, Schildkraut J, Schumacher FR, Zheng W, Boffetta P, Stucker I, Willett W, Gruber S, Easton DF, Hunter DJ, Sellers TA, Haiman C, Henderson

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BE, Hung RJ, Amos C, Pierce BL, Lindström S, Kraft P; on behalf of: the Colorectal Transdisciplinary Study (CORECT); Discovery, Biology and Risk of Inherited Variants in Breast Cancer (DRIVE); Elucidating Loci Involved in Prostate Cancer Susceptibility (ELLIPSE); Follow-up of Ovarian Cancer Genetic Association and Interaction Studies (FOCI); and Transdisciplinary Research in Cancer of the Lung (TRICL). Mendelian randomization study of adiposity-related traits and risk of breast, ovarian, prostate, lung and colorectal cancer. Int J Epidemiol. 2016 Jun;45(3):896-908.

408. Machiela MJ, Zhou W, Karlins E, Sampson JN, Freedman ND, Yang Q, Hicks B, Dagnall C, Hautman C, Jacobs KB, Abnet CC, Aldrich MC, Amos C, Amundadottir LT, Arslan AA, Beane-Freeman LE, Berndt SI, Black A, Blot WJ, Bock CH, Bracci PM, Brinton LA, Bueno-de-Mesquita HB, Burdett L, Buring JE, Butler MA, Canzian F, Carreón T, Chaffee KG, Chang IS, Chatterjee N, Chen C, Chen C, Chen K, Chung CC, Cook LS, Crous Bou M, Cullen M, Davis FG, De Vivo I, Ding T, Doherty J, Duell EJ, Epstein CG, Fan JH, Figueroa JD, Fraumeni JF, Friedenreich CM, Fuchs CS, Gallinger S, Gao YT, Gapstur SM, Garcia-Closas M, Gaudet MM, Gaziano JM, Giles GG, Gillanders EM, Giovannucci EL, Goldin L, Goldstein AM, Haiman CA, Hallmans G, Hankinson SE, Harris CC, Henriksson R, Holly EA, Hong YC, Hoover RN, Hsiung CA, Hu N, Hu W, Hunter DJ, Hutchinson A, Jenab M, Johansen C, Khaw KT, Kim HN, Kim YH, Kim YT, Klein AP, Klein R, Koh WP, Kolonel LN, Kooperberg C, Kraft P, Krogh V, Kurtz RC, LaCroix A, Lan Q, Landi MT, Marchand LL, Li D, Liang X, Liao LM, Lin D, Liu J, Lissowska J, Lu L, Magliocco AM, Malats N, Matsuo K, McNeill LH, McWilliams RR, Melin BS, Mirabello L, Moore L, Olson SH, Orlow I, Park JY, Patiño-Garcia A, Peplonska B, Peters U, Petersen GM, Pooler L, Prescott J, Prokunina-Olsson L, Purdue MP, Qiao YL, Rajaraman P, Real FX, Riboli E, Risch HA, Rodriguez-Santiago B, Ruder AM, Savage SA, Schumacher F, Schwartz AG, Schwartz KL, Seow A, Wendy Setiawan V, Severi G, Shen H, Sheng X, Shin MH, Shu XO, Silverman DT, Spitz MR, Stevens VL, Stolzenberg-Solomon R, Stram D, Tang ZZ, Taylor PR, Teras LR, Tobias GS, Van Den Berg D, Visvanathan K, Wacholder S, Wang JC, Wang Z, Wentzensen N, Wheeler W, White E, Wiencke JK, Wolpin BM, Wong MP, Wu C, Wu T, Wu X, Wu YL, Wunder JS, Xia L, Yang HP, Yang PC, Yu K, Zanetti KA, Zeleniuch-Jacquotte A, Zheng W, Zhou B, Ziegler RG, Perez-Jurado LA, Caporaso NE, Rothman N, Tucker M, Dean MC, Yeager M, Chanock SJ. Female chromosome X mosaicism is age-related and preferentially affects the inactivated X chromosome. Nat Commun. 2016 Jun;7:11843.

409. Crous-Bou M, De Vivo I, Camargo CA Jr, Varraso R, Grodstein F, Jensen MK, Kraft P, Goldhaber SZ, Lindström S, Kabrhel C. Interactions of established risk factors and a GWAS-based genetic risk score on the risk of venous thromboembolism. Thromb Haemost. 2016 Jun 16;116(3). [Epub ahead of print]

410. Wu W, Liu H, Song F, Chen LS, Kraft P, Wei Q, Han J. Associations between smoking behavior-related alleles and the risk of melanoma. Oncotarget. 2016 Jun 17 [Epub ahead of print].

411. Zeng C, Guo X, Long J, Kuchenbaecker KB, Droit A, Michailidou K, Ghoussaini M, Kar S, Freeman A, Hopper JL, Milne RL, Bolla MK, Wang Q, Dennis J, Agata S, Ahmed S, Aittomäki K, Andrulis IL, Anton-Culver H, Antonenkova NN, Arason A, Arndt V, Arun BK, Arver B, Bacot F, Barrowdale D, Baynes C, Beeghly-Fadiel A, Benitez J, Bermisheva M, Blomqvist C, Blot WJ, Bogdanova NV, Bojesen SE, Bonanni B, Borresen-Dale AL, Brand JS, Brauch H, Brennan P, Brenner H, Broeks A, Brüning T, Burwinkel B, Buys SS, Cai Q, Caldes T, Campbell I, Carpenter J, Chang-Claude J, Choi JY, Claes KB, Clarke C, Cox A, Cross SS, Czene K, Daly MB, de la Hoya M, De Leeneer K, Devilee P, Diez O, Domchek SM, Doody M, Dorfling CM, Dörk T, Dos-Santos-Silva I, Dumont M, Dwek M, Dworniczak B, Egan K, Eilber U, Einbeigi Z, Ejlertsen B, Ellis S, Frost D, Lalloo F; EMBRACE, Fasching PA, Figueroa J, Flyger H, Friedlander M, Friedman E, Gambino G, Gao YT, Garber J, García-Closas M, Gehrig A, Damiola F, Lesueur F, Mazoyer S, Stoppa-Lyonnet D; behalf of GEMO Study Collaborators, Giles GG, Godwin AK, Goldgar DE, González-Neira A, Greene MH, Guénel P, Haeberle L, Haiman CA, Hallberg E, Hamann U, Hansen TV, Hart S, Hartikainen JM, Hartman M, Hassan N, Healey S, Hogervorst FB, Verhoef S; HEBON, Hendricks CB, Hillemanns P, Hollestelle A, Hulick PJ, Hunter DJ, Imyanitov EN, Isaacs C, Ito H, Jakubowska A, Janavicius R,

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Jaworska-Bieniek K, Jensen UB, John EM, Joly Beauparlant C, Jones M, Kabisch M, Kang D, Karlan BY, Kauppila S, Kerin MJ, Khan S, Khusnutdinova E, Knight JA, Konstantopoulou I, Kraft P, Kwong A, Laitman Y, Lambrechts D, Lazaro C, Le Marchand L, Lee CN, Lee MH, Lester J, Li J, Liljegren A, Lindblom A, Lophatananon A, Lubinski J, Mai PL, Mannermaa A, Manoukian S, Margolin S, Marme F, Matsuo K, McGuffog L, Meindl A, Menegaux F, Montagna M, Muir K, Mulligan AM, Nathanson KL, Neuhausen SL, Nevanlinna H, Newcomb PA, Nord S, Nussbaum RL, Offit K, Olah E, Olopade OI, Olswold C, Osorio A, Papi L, Park-Simon TW, Paulsson-Karlsson Y, Peeters S, Peissel B, Peterlongo P, Peto J, Pfeiler G, Phelan CM, Presneau N, Radice P, Rahman N, Ramus SJ, Rashid MU, Rennert G, Rhiem K, Rudolph A, Salani R, Sangrajrang S, Sawyer EJ, Schmidt MK, Schmutzler RK, Schoemaker MJ, Schürmann P, Seynaeve C, Shen CY, Shrubsole MJ, Shu XO, Sigurdson A, Singer CF, Slager S, Soucy P, Southey M, Steinemann D, Swerdlow A, Szabo CI, Tchatchou S, Teixeira MR, Teo SH, Terry MB, Tessier DC, Teulé A, Thomassen M, Tihomirova L, Tischkowitz M, Toland AE, Tung N, Turnbull C, van den Ouweland AM, van Rensburg EJ, Ven den Berg D, Vijai J, Wang-Gohrke S, Weitzel JN, Whittemore AS, Winqvist R, Wong TY, Wu AH, Yannoukakos D, Yu JC, Pharoah PD, Hall P, Chenevix-Trench G; KConFab; AOCS Investigators, Dunning AM, Simard J, Couch FJ, Antoniou AC, Easton DF, Zheng W. Identification of independent association signals and putative functional variants for breast cancer risk through fine-scale mapping of the 12p11 locus. Breast Cancer Res. 2016 Jun;18(1):64.

412. Permuth JB, Pirie A, Ann Chen Y, Lin HY, Reid BM, Chen Z, Monteiro A, Dennis J, Mendoza-Fandino G; AOCS Study Group; Australian Cancer Study (Ovarian Cancer), Anton-Culver H, Bandera EV, Bisogna M, Brinton L, Brooks-Wilson A, Carney ME, Chenevix-Trench G, Cook LS, Cramer DW, Cunningham JM, Cybulski C, D'Aloisio AA, Anne Doherty J, Earp M, Edwards RP, Fridley BL, Gayther SA, Gentry-Maharaj A, Goodman MT, Gronwald J, Hogdall E, Iversen ES, Jakubowska A, Jensen A, Karlan BY, Kelemen LE, Kjaer SK, Kraft P, Le ND, Levine DA, Lissowska J, Lubinski J, Matsuo K, Menon U, Modugno R, Moysich KB, Nakanishi T, Ness RB, Olson S, Orlow I, Pearce CL, Pejovic T, Poole EM, Ramus SJ, Anne Rossing M, Sandler DP, Shu XO, Song H, Taylor JA, Teo SH, Terry KL, Thompson PJ, Tworoger SS, Webb PM, Wentzensen N, Wilkens LR, Winham S, Woo YL, Wu AH, Yang H, Zheng W, Ziogas A, Phelan CM, Schildkraut JM, Berchuck A, Goode EL, Dp Pharoah P, Sellers TA; Ovarian Cancer Association Consortium. Exome genotyping arrays to identify rare and low frequency variants associated with epithelial ovarian cancer risk. Hum Mol Genet. 2016 Jul 4 [Epub ahead of print].

413. Chahal HS, Lin Y, Ransohoff KJ, Hinds DA, Wu W, Dai HJ, Qureshi AA, Li WQ, Kraft P, Tang JY, Han J, Sarin KY. Genome-wide association study identifies novel susceptibility loci for cutaneous squamous cell carcinoma. Nat Commun. 2016 Jul 18;7:12048.

414. Karami S, Han Y, Pande M, Cheng I, Rudd J, Pierce BL, Nutter EL, Schumacher FR, Kote-Jarai Z, Lindstrom S, Witte JS, Fang S, Han J, Kraft P, Hunter DJ, Song F, Hung RJ, McKay J, Gruber SB, Chanock SJ, Risch A, Shen H, Haiman CA, Boardman L, Ulrich CM, Casey G, Peters U, Amin Al Olama A, Berchuck A, Berndt SI, Bezieau S, Brennan P, Brenner H, Brinton L, Caporaso N, Chan AT, Chang-Claude J, Christiani DC, Cunningham JM, Easton D, Eeles RA, Eisen T, Gala M, Gallinger SJ, Gayther SA, Goode EL, Grönberg H, Henderson BE, Houlston R, Joshi AD, Küry S, Landi MT, Le Marchand L, Muir K, Newcomb PA, Permuth-Wey J, Pharoah P, Phelan C, Potter JD, Ramus SJ, Risch H, Schildkraut J, Slattery ML, Song H, Wentzensen N, White E, Wiklund F, Zanke BW, Sellers TA, Zheng W, Chatterjee N, Amos CI, Doherty JA; GECCO and the GAME-ON Network: CORECT, DRIVE, ELLIPSE, FOCI, and TRICL. Telomere structure and maintenance gene variants and risk of five cancer types. Int J Cancer. 2016 Jul 26 [Epub ahead of print].

415. Okbay A, Baselmans BM, Neve JE, Turley P, Nivard MG, Fontana MA, Meddens SF, Linnér RK, Rietveld CA, Derringer J, Gratten J, Lee JJ, Liu JZ, de Vlaming R, Ahluwalia TS, Buchwald J, Cavadino A, Frazier-Wood AC, Furlotte NA, Garfield V, Geisel MH, Gonzalez JR, Haitjema S, Karlsson R, van der Laan SW, Ladwig KH, Lahti J, van der Lee SJ, Lind PA, Liu T, Matteson L, Mihailov E, Miller MB, Minica CC, Nolte IM, Mook-Kanamori D, van der Most PJ, Oldmeadow C,

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Qian Y, Raitakari O, Rawal R, Realo A, Rueedi R, Schmidt B, Smith AV, Stergiakouli E, Tanaka T, Taylor K, Thorleifsson G, Wedenoja J, Wellmann J, Westra HJ, Willems SM, Zhao W; LifeLines Cohort Study, Amin N, Bakshi A, Bergmann S, Bjornsdottir G, Boyle PA, Cherney S, Cox SR, Davies G, Davis OS, Ding J, Direk N, Eibich P, Emeny RT, Fatemifar G, Faul JD, Ferrucci L, Forstner AJ, Gieger C, Gupta R, Harris TB, Harris JM, Holliday EG, Hottenga JJ, Jager PL, Kaakinen MA, Kajantie E, Karhunen V, Kolcic I, Kumari M, Launer LJ, Franke L, Li-Gao R, Liewald DC, Koini M, Loukola A, Marques-Vidal P, Montgomery GW, Mosing MA, Paternoster L, Pattie A, Petrovic KE, Pulkki-Råback L, Quaye L, Räikkönen K, Rudan I, Scott RJ, Smith JA, Sutin AR, Trzaskowski M, Vinkhuyzen AE, Yu L, Zabaneh D, Attia JR, Bennett DA, Berger K, Bertram L, Boomsma DI, Snieder H, Chang SC, Cucca F, Deary IJ, van Duijn CM, Eriksson JG, Bültmann U, de Geus EJ, Groenen PJ, Gudnason V, Hansen T, Hartman CA, Haworth CM, Hayward C, Heath AC, Hinds DA, Hyppönen E, Iacono WG, Järvelin MR, Jöckel KH, Kaprio J, Kardia SL, Keltikangas-Järvinen L, Kraft P, Kubzansky LD, Lehtimäki T, Magnusson PK, Martin NG, McGue M, Metspalu A, Mills M, de Mutsert R, Oldehinkel AJ, Pasterkamp G, Pedersen NL, Plomin R, Polasek O, Power C, Rich SS, Rosendaal FR, den Ruijter HM, Schlessinger D, Schmidt H, Svento R, Schmidt R, Alizadeh BZ, Sørensen TI, Spector TD, Starr JM, Stefansson K, Steptoe A, Terracciano A, Thorsteinsdottir U, Thurik AR, Timpson NJ, Tiemeier H, Uitterlinden AG, Vollenweider P, Wagner GG, Weir DR, Yang J, Conley DC, Smith GD, Hofman A, Johannesson M, Laibson DI, Medland SE, Meyer MN, Pickrell JK, Esko T, Krueger RF, Beauchamp JP, Koellinger PD, Benjamin DJ, Bartels M, Cesarini D. Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses. Nat Genet. 2016 Jul 27;48(8):970.

416. Guo Y, Warren Andersen S, Shu XO, Michailidou K, Bolla MK, Wang Q, Garcia-Closas M, Milne RL, Schmidt MK, Chang-Claude J, Dunning A, Bojesen SE, Ahsan H, Aittomäki K, Andrulis IL, Anton-Culver H, Arndt V, Beckmann MW, Beeghly-Fadiel A, Benitez J, Bogdanova NV, Bonanni B, Børresen-Dale AL, Brand J, Brauch H, Brenner H, Brüning T, Burwinkel B, Casey G, Chenevix-Trench G, Couch FJ, Cox A, Cross SS, Czene K, Devilee P, Dörk T, Dumont M, Fasching PA, Figueroa J, Flesch-Janys D, Fletcher O, Flyger H, Fostira F, Gammon M, Giles GG, Guénel P, Haiman CA, Hamann U, Hooning MJ, Hopper JL, Jakubowska A, Jasmine F, Jenkins M, John EM, Johnson N, Jones ME, Kabisch M, Kibriya M, Knight JA, Koppert LB, Kosma VM, Kristensen V, Le Marchand L, Lee E, Li J, Lindblom A, Luben R, Lubinski J, Malone KE, Mannermaa A, Margolin S, Marme F, McLean C, Meijers-Heijboer H, Meindl A, Neuhausen SL, Nevanlinna H, Neven P, Olson JE, Perez JI, Perkins B, Peterlongo P, Phillips KA, Pylkäs K, Rudolph A, Santella R, Sawyer EJ, Schmutzler RK, Seynaeve C, Shah M, Shrubsole MJ, Southey MC, Swerdlow AJ, Toland AE, Tomlinson I, Torres D, Truong T, Ursin G, Van Der Luijt RB, Verhoef S, Whittemore AS, Winqvist R, Zhao H, Zhao S, Hall P, Simard J, Kraft P, Pharoah P, Hunter D, Easton DF, Zheng W. Genetically Predicted Body Mass Index and Breast Cancer Risk: Mendelian Randomization Analyses of Data from 145,000 Women of European Descent. PLoS Med. 2016 Aug;13(8):e1002105.

417. Zhang M, Wang Z, Obazee O, Jia J, Childs EJ, Hoskins J, Figlioli G, Mocci E, Collins I, Chung CC, Hautman C, Arslan AA, Beane-Freeman L, Bracci PM, Buring J, Duell EJ, Gallinger S, Giles GG, Goodman GE, Goodman PJ, Kamineni A, Kolonel LN, Kulke MH, Malats N, Olson SH, Sesso HD, Visvanathan K, White E, Zheng W, Abnet CC, Albanes D, Andreotti G, Brais L, Bueno-de-Mesquita HB, Basso D, Berndt SI, Boutron-Ruault MC, Bijlsma MF, Brenner H, Burdette L, Campa D, Caporaso NE, Capurso G, Cavestro GM, Cotterchio M, Costello E, Elena J, Boggi U, Gaziano JM, Gazouli M, Giovannucci EL, Goggins M, Gross M, Haiman CA, Hassan M, Helzlsouer KJ, Hu N, Hunter DJ, Iskierka-Jazdzewska E, Jenab M, Kaaks R, Key TJ, Khaw KT, Klein EA, Kogevinas M, Krogh V, Kupcinskas J, Kurtz RC, Landi MT, Landi S, Le Marchand L, Mambrini A, Mannisto S, Milne RL, Neale RE, Oberg AL, Panico S, Patel AV, Peeters PH, Peters U, Pezzilli R, Porta M, Purdue M, Quiros JR, Riboli E, Rothman N, Scarpa A, Scelo G, Shu XO, Silverman DT, Soucek P, Strobel O, Sund M, Małecka-Panas E, Taylor PR, Tavano F, Travis RC, Thornquist M, Tjønneland A, Tobias GS, Trichopoulos D, Vashist Y, Vodicka P, Wactawski-Wende J, Wentzensen N, Yu H, Yu K, Zeleniuch-

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Jacquotte A, Kooperberg C, Risch HA, Jacobs EJ, Li D, Fuchs C, Hoover R, Hartge P, Chanock SJ, Petersen GM, Stolzenberg-Solomon RS, Wolpin BM, Kraft P, Klein AP, Canzian F, Amundadottir LT. Three new pancreatic cancer susceptibility signals identified on chromosomes 1q32.1, 5p15.33 and 8q24.21. Oncotarget. 2016 Aug 1 [Epub ahead of print].

418. Liu Y, Bailey JC, Helwa I, Dismuke WM, Cai J, Drewry M, Brilliant MH, Budenz DL, Christen WG, Chasman DI, Fingert JH, Gaasterland D, Gaasterland T, Gordon MO, Igo RP Jr, Kang JH, Kass MA, Kraft P, Lee RK, Lichter P, Moroi SE, Realini A, Richards JE, Ritch R, Schuman JS, Scott WK, Singh K, Sit AJ, Song YE, Vollrath D, Weinreb R, Medeiros F, Wollstein G, Zack DJ, Zhang K, Pericak-Vance MA, Gonzalez P, Stamer WD, Kuchtey J, Kuchtey RW, Allingham RR, Hauser MA, Pasquale LR, Haines JL, Wiggs JL. A Common Variant in MIR182 Is Associated With Primary Open-Angle Glaucoma in the NEIGHBORHOOD Consortium. Invest Ophthalmol Vis Sci. 2016 Aug;57(10):3974-81.

419. Joshi AD, Andersson C, Buch S, Stender S, Noordam R, Weng LC, Weeke PE, Auer PL, Boehm B, Chen C, Choi H, Curhan G, Denny JC, De Vivo I, Eicher JD, Ellinghaus D, Folsom AR, Fuchs C, Gala M, Haessler J, Hofman A, Hu F, Hunter DJ, Janssen HL, Kang JH, Kooperberg C, Kraft P, Kratzer W, Lieb W, Lutsey PL, Darwish Murad S, Nordestgaard BG, Pasquale LR, Reiner AP, Ridker PM, Rimm E, Rose LM, Shaffer CM, Schafmayer C, Tamimi RM, Uitterlinden AG, Völker U, Völzke H, Wakabayashi Y, Wiggs JL, Zhu J, Roden DM, Stricker BH, Tang W, Teumer A, Hampe J, Tybjærg-Hansen A, Chasman DI, Chan AT, Johnson AD. Four Susceptibility Loci for Gallstone Disease Identified in a Meta-analysis of Genome-Wide Association Studies. Gastroenterology. 2016 Aug;151(2):351-363.

420. Du Y, Ter-Minassian M, Brais L, Brooks N, Waldron A, Chan JA, Lin X, Kraft P, Christiani DC, Kulke MH. Genetic associations with neuroendocrine tumor risk: results from a genome-wide association study. Endocr Relat Cancer. 2016 Aug;23(8):587-94.

421. Carreras-Torres R, Haycock PC, Relton CL, Martin RM, Smith GD, Kraft P, Gao C, Tworoger S, Le Marchand L, Wilkens LR, Park SL, Haiman C, Field JK, Davies M, Marcus M, Liu G, Caporaso NE, Christiani DC, Wei Y, Chen C, Doherty JA, Severi G, Goodman GE, Hung RJ, Amos CI, McKay J, Johansson M, Brennan P. The causal relevance of body mass index in different histological types of lung cancer: A Mendelian randomization study. Sci Rep. 2016 Aug 4;6:31121.

422. Slade E, Kraft P. Leveraging Methylome-Environment Interaction to Detect Genetic Determinants of Disease. Hum Hered. 2016 Aug 5;81(1):26-34. [Epub ahead of print]

423. Shah HS, Gao H, Morieri ML, Skupien J, Marvel S, Paré G, Mannino GC, Buranasupkajorn P, Mendonca C, Hastings T, Marcovina SM, Sigal RJ, Gerstein HC, Wagner MJ, Motsinger-Reif AA, Buse JB, Kraft P, Mychaleckyj JC, Doria A. Genetic Predictors of Cardiovascular Mortality During Intensive Glycemic Control in Type 2 Diabetes: Findings From the ACCORD Clinical Trial. Diabetes Care. 2016 Aug 15 [Epub ahead of print].

424. Chahal HS, Wu W, Ransohoff KJ, Yang L, Hedlin H, Desai M, Lin Y, Dai HJ, Qureshi AA, Li WQ, Kraft P, Hinds DA, Tang JY, Han J, Sarin KY. Genome-wide association study identifies 14 novel risk alleles associated with basal cell carcinoma. Nat Commun. 2016 Aug 19;7:12510.

425. Yuan C, Qian ZR, Babic A, Morales-Oyarvide V, Rubinson DA, Kraft P, Ng K, Bao Y, Giovannucci EL, Ogino S, Stampfer MJ, Gaziano JM, Sesso HD, Buring JE, Cochrane BB, Chlebowski RT, Snetselaar LG, Manson JE, Fuchs CS, Wolpin BM. Prediagnostic Plasma 25-Hydroxyvitamin D and Pancreatic Cancer Survival. J Clin Oncol. 2016 Aug;34(24):2899-905.

426. Khankari NK, Shu XO, Wen W, Kraft P, Lindström S, Peters U, Schildkraut J, Schumacher F, Bofetta P, Risch A, Bickeböller H, Amos CI, Easton D, Eeles RA, Gruber SB, Haiman CA, Hunter DJ, Chanock SJ, Pierce BL, Zheng W; Colorectal Transdisciplinary Study (CORECT); Discovery, Biology, and Risk of Inherited Variants in Breast Cancer (DRIVE); Elucidating Loci Involved in Prostate Cancer Susceptibility (ELLIPSE); Transdisciplinary Research in Cancer of the Lung (TRICL). Association between Adult Height and Risk of Colorectal, Lung, and Prostate Cancer: Results from Meta-analyses of Prospective Studies and Mendelian Randomization Analyses. PLoS Med. 2016 Sep;13(9):e1002118.

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427. Fehringer G, Kraft P, Pharoah PD, Eeles RA, Chatterjee N, Schumacher FR, Schildkraut JM, Lindström S, Brennan P, Bickeböller H, Houlston RS, Landi MT, Caporaso N, Risch A, Amin Al Olama A, Berndt SI, Giovannucci EL, Grönberg H, Kote-Jarai Z, Ma J, Muir K, Stampfer MJ, Stevens VL, Wiklund F, Willett WC, Goode EL, Permuth JB, Risch HA, Reid BM, Bezieau S, Brenner H, Chan AT, Chang-Claude J, Hudson TJ, Kocarnik JK, Newcomb PA, Schoen RE, Slattery ML, White E, Adank MA, Ahsan H, Aittomäki K, Baglietto L, Blomquist C, Canzian F, Czene K, Dos-Santos-Silva I, Eliassen AH, Figueroa JD, Flesch-Janys D, Fletcher O, Garcia-Closas M, Gaudet MM, Johnson N, Hall P, Hazra A, Hein R, Hofman A, Hopper JL, Irwanto A, Johansson M, Kaaks R, Kibriya MG, Lichtner P, Liu J, Lund E, Makalic E, Meindl A, Müller-Myhsok B, Muranen TA, Nevanlinna H, Peeters PH, Peto J, Prentice RL, Rahman N, Sanchez MJ, Schmidt DF, Schmutzler RK, Southey MC, Tamimi R, Travis RC, Turnbull C, Uitterlinden AG, Wang Z, Whittemore AS, Yang XR, Zheng W, Buchanan DD, Casey G, Conti DV, Edlund CK, Gallinger S, Haile RW, Jenkins M, Le Marchand L, Li L, Lindor NM, Schmit SL, Thibodeau SN, Woods MO, Rafnar T, Gudmundsson J, Stacey SN, Stefansson K, Sulem P, Chen YA, Tyrer JP, Christiani DC, Wei Y, Shen H, Hu Z, Shu XO, Shiraishi K, Takahashi A, Bossé Y, Obeidat M, Nickle D, Timens W, Freedman ML, Li Q, Seminara D, Chanock SJ, Gong J, Peters U, Gruber SB, Amos CI, Sellers TA, Easton DF, Hunter DJ, Haiman CA, Henderson BE, Hung RJ; Ovarian Cancer Association Consortium (OCAC); PRACTICAL Consortium; Hereditary Breast and Ovarian Cancer Research Group Netherlands (HEBON); Colorectal Transdisciplinary (CORECT) Study; African American Breast Cancer Consortium (AABC) and African Ancestry Prostate Cancer Consortium (AAPC). Cross-Cancer Genome-Wide Analysis of Lung, Ovary, Breast, Prostate, and Colorectal Cancer Reveals Novel Pleiotropic Associations. Cancer Res. 2016 Sep;76(17):5103-14.

428. Kar SP, Beesley J, Amin Al Olama A, Michailidou K, Tyrer J, Kote-Jarai Z, Lawrenson K, Lindstrom S, Ramus SJ, Thompson DJ; ABCTB Investigators, Kibel AS, Dansonka-Mieszkowska A, Michael A, Dieffenbach AK, Gentry-Maharaj A, Whittemore AS, Wolk A, Monteiro A, Peixoto A, Kierzek A, Cox A, Rudolph A, Gonzalez-Neira A, Wu AH, Lindblom A, Swerdlow A; AOCS Study Group & Australian Cancer Study (Ovarian Cancer); APCB BioResource, Ziogas A, Ekici AB, Burwinkel B, Karlan BY, Nordestgaard BG, Blomqvist C, Phelan C, McLean C, Pearce CL, Vachon C, Cybulski C, Slavov C, Stegmaier C, Maier C, Ambrosone CB, Høgdall CK, Teerlink CC, Kang D, Tessier DC, Schaid DJ, Stram DO, Cramer DW, Neal DE, Eccles D, Flesch-Janys D, Edwards DR, Wokozorczyk D, Levine DA, Yannoukakos D, Sawyer EJ, Bandera EV, Poole EM, Goode EL, Khusnutdinova E, Høgdall E, Song F, Bruinsma F, Heitz F, Modugno F, Hamdy FC, Wiklund F, Giles GG, Olsson H, Wildiers H, Ulmer HU, Pandha H, Risch HA, Darabi H, Salvesen HB, Nevanlinna H, Gronberg H, Brenner H, Brauch H, Anton-Culver H, Song H, Lim HY, McNeish I, Campbell I, Vergote I, Gronwald J, Lubiński J, Stanford JL, Benítez J, Doherty JA, Permuth JB, Chang-Claude J, Donovan JL, Dennis J, Schildkraut JM, Schleutker J, Hopper JL, Kupryjanczyk J, Park JY, Figueroa J, Clements JA, Knight JA, Peto J, Cunningham JM, Pow-Sang J, Batra J, Czene K, Lu KH, Herkommer K, Khaw KT; kConFab Investigators, Matsuo K, Muir K, Offitt K, Chen K, Moysich KB, Aittomäki K, Odunsi K, Kiemeney LA, Massuger LF, Fitzgerald LM, Cook LS, Cannon-Albright L, Hooning MJ, Pike MC, Bolla MK, Luedeke M, Teixeira MR, Goodman MT, Schmidt MK, Riggan M, Aly M, Rossing MA, Beckmann MW, Moisse M, Sanderson M, Southey MC, Jones M, Lush M, Hildebrandt MA, Hou MF, Schoemaker MJ, Garcia-Closas M, Bogdanova N, Rahman N; NBCS Investigators, Le ND, Orr N, Wentzensen N, Pashayan N, Peterlongo P, Guénel P, Brennan P, Paulo P, Webb PM, Broberg P, Fasching PA, Devilee P, Wang Q, Cai Q, Li Q, Kaneva R, Butzow R, Kopperud RK, Schmutzler RK, Stephenson RA, MacInnis RJ, Hoover RN, Winqvist R, Ness R, Milne RL, Travis RC, Benlloch S, Olson SH, McDonnell SK, Tworoger SS, Maia S, Berndt S, Lee SC, Teo SH, Thibodeau SN, Bojesen SE, Gapstur SM, Kjær SK, Pejovic T, Tammela TL; GENICA Network; PRACTICAL consortium, Dörk T, Brüning T, Wahlfors T, Key TJ, Edwards TL, Menon U, Hamann U, Mitev V, Kosma VM, Setiawan VW, Kristensen V, Arndt V, Vogel W, Zheng W, Sieh W, Blot WJ, Kluzniak W, Shu XO, Gao YT, Schumacher F, Freedman ML, Berchuck A, Dunning AM, Simard J, Haiman CA, Spurdle A, Sellers TA, Hunter DJ, Henderson BE, Kraft P, Chanock SJ, Couch FJ, Hall P, Gayther SA, Easton DF,

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Chenevix-Trench G, Eeles R, Pharoah PD, Lambrechts D. Genome-Wide Meta-Analyses of Breast, Ovarian, and Prostate Cancer Association Studies Identify Multiple New Susceptibility Loci Shared by at Least Two Cancer Types. Cancer Discov. 2016 Sep;6(9):1052-67.

429. Townsend MK, Aschard H, De Vivo I, Michels KB, Kraft P. Genomics, Telomere Length, Epigenetics, and Metabolomics in the Nurses' Health Studies. Am J Public Health. 2016 Sep;106(9):1663-8.

430. Southey MC, Goldgar DE, Winqvist R, Pylkäs K, Couch F, Tischkowitz M, Foulkes WD, Dennis J, Michailidou K, van Rensburg EJ, Heikkinen T, Nevanlinna H, Hopper JL, Dörk T, Claes KB, Reis-Filho J, Teo ZL, Radice P, Catucci I, Peterlongo P, Tsimiklis H, Odefrey FA, Dowty JG, Schmidt MK, Broeks A, Hogervorst FB, Verhoef S, Carpenter J, Clarke C, Scott RJ, Fasching PA, Haeberle L, Ekici AB, Beckmann MW, Peto J, Dos-Santos-Silva I, Fletcher O, Johnson N, Bolla MK, Sawyer EJ, Tomlinson I, Kerin MJ, Miller N, Marme F, Burwinkel B, Yang R, Guénel P, Truong T, Menegaux F, Sanchez M, Bojesen S, Nielsen SF, Flyger H, Benitez J, Zamora MP, Perez JI, Menéndez P, Anton-Culver H, Neuhausen S, Ziogas A, Clarke CA, Brenner H, Arndt V, Stegmaier C, Brauch H, Brüning T, Ko YD, Muranen TA, Aittomäki K, Blomqvist C, Bogdanova NV, Antonenkova NN, Lindblom A, Margolin S, Mannermaa A, Kataja V, Kosma VM, Hartikainen JM, Spurdle AB, Investigators K; Australian Ovarian Cancer Study Group, Wauters E, Smeets D, Beuselinck B, Floris G, Chang-Claude J, Rudolph A, Seibold P, Flesch-Janys D, Olson JE, Vachon C, Pankratz VS, McLean C, Haiman CA, Henderson BE, Schumacher F, Le Marchand L, Kristensen V, Alnæs GG, Zheng W, Hunter DJ, Lindstrom S, Hankinson SE, Kraft P, Andrulis I, Knight JA, Glendon G, Mulligan AM, Jukkola-Vuorinen A, Grip M, Kauppila S, Devilee P, Tollenaar RA, Seynaeve C, Hollestelle A, Garcia-Closas M, Figueroa J, Chanock SJ, Lissowska J, Czene K, Darabi H, Eriksson M, Eccles DM, Rafiq S, Tapper WJ, Gerty SM, Hooning MJ, Martens JW, Collée JM, Tilanus-Linthorst M, Hall P, Li J, Brand JS, Humphreys K, Cox A, Reed MW, Luccarini C, Baynes C, Dunning AM, Hamann U, Torres D, Ulmer HU, Rüdiger T, Jakubowska A, Lubinski J, Jaworska K, Durda K, Slager S, Toland AE, Ambrosone CB, Yannoukakos D, Swerdlow A, Ashworth A, Orr N, Jones M, González-Neira A, Pita G, Alonso MR, Álvarez N, Herrero D, Tessier DC, Vincent D, Bacot F, Simard J, Dumont M, Soucy P, Eeles R, Muir K, Wiklund F, Gronberg H, Schleutker J, Nordestgaard BG, Weischer M, Travis RC, Neal D, Donovan JL, Hamdy FC, Khaw KT, Stanford JL, Blot WJ, Thibodeau S, Schaid DJ, Kelley JL, Maier C, Kibel AS, Cybulski C, Cannon-Albright L, Butterbach K, Park J, Kaneva R, Batra J, Teixeira MR, Kote-Jarai Z, Olama AA, Benlloch S, Renner SP, Hartmann A, Hein A, Ruebner M, Lambrechts D, Van Nieuwenhuysen E, Vergote I, Lambretchs S, Doherty JA, Rossing MA, Nickels S, Eilber U, Wang-Gohrke S, Odunsi K, Sucheston-Campbell LE, Friel G, Lurie G, Killeen JL, Wilkens LR, Goodman MT, Runnebaum I, Hillemanns PA, Pelttari LM, Butzow R, Modugno F, Edwards RP, Ness RB, Moysich KB, du Bois A, Heitz F, Harter P, Kommoss S, Karlan BY, Walsh C, Lester J, Jensen A, Kjaer SK, Høgdall E, Peissel B, Bonanni B, Bernard L, Goode EL, Fridley BL, Vierkant RA, Cunningham JM, Larson MC, Fogarty ZC, Kalli KR, Liang D, Lu KH, Hildebrandt MA, Wu X, Levine DA, Dao F, Bisogna M, Berchuck A, Iversen ES, Marks JR, Akushevich L, Cramer DW, Schildkraut J, Terry KL, Poole EM, Stampfer M, Tworoger SS, Bandera EV, Orlow I, Olson SH, Bjorge L, Salvesen HB, van Altena AM, Aben KK, Kiemeney LA, Massuger LF, Pejovic T, Bean Y, Brooks-Wilson A, Kelemen LE, Cook LS, Le ND, Górski B, Gronwald J, Menkiszak J, Høgdall CK, Lundvall L, Nedergaard L, Engelholm SA, Dicks E, Tyrer J, Campbell I, McNeish I, Paul J, Siddiqui N, Glasspool R, Whittemore AS, Rothstein JH, McGuire V, Sieh W, Cai H, Shu XO, Teten RT, Sutphen R, McLaughlin JR, Narod SA, Phelan CM, Monteiro AN, Fenstermacher D, Lin HY, Permuth JB, Sellers TA, Chen YA, Tsai YY, Chen Z, Gentry-Maharaj A, Gayther SA, Ramus SJ, Menon U, Wu AH, Pearce CL, Van Den Berg D, Pike MC, Dansonka-Mieszkowska A, Plisiecka-Halasa J, Moes-Sosnowska J, Kupryjanczyk J, Pharoah PD, Song H, Winship I, Chenevix-Trench G, Giles GG, Tavtigian SV, Easton DF, Milne RL. PALB2, CHEK2 and ATM rare variants and cancer risk: data from COGS. J Med Genet. 2016 Sep 5 [Epub ahead of print].

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431. Teumer A, Qi Q, Nethander M, Aschard H, Bandinelli S, Beekman M, Berndt SI, Bidlingmaier M, Broer L; CHARGE Longevity Working Group, Cappola A, Ceda GP, Chanock S, Chen MH, Chen TC, Chen YD, Chung J, Del Greco Miglianico F, Eriksson J, Ferrucci L, Friedrich N, Gnewuch C, Goodarzi MO, Grarup N, Guo T, Hammer E, Hayes RB, Hicks AA, Hofman A, Houwing-Duistermaat JJ, Hu F, Hunter DJ, Husemoen LL, Isaacs A, Jacobs KB, Janssen JA, Jansson JO, Jehmlich N, Johnson S, Juul A, Karlsson M, Kilpelainen TO, Kovacs P, Kraft P, Li C, Linneberg A, Liu Y, Loos RJ; Body Composition Genetics Consortium, Lorentzon M, Lu Y, Maggio M, Magi R, Meigs J, Mellström D, Nauck M, Newman AB, Pollak MN, Pramstaller PP, Prokopenko I, Psaty BM, Reincke M, Rimm EB, Rotter JI, Saint Pierre A, Schurmann C, Seshadri S, Sjögren K, Slagboom PE, Strickler HD, Stumvoll M, Suh Y, Sun Q, Zhang C, Svensson J, Tanaka T, Tare A, Tönjes A, Uh HW, van Duijn CM, van Heemst D, Vandenput L, Vasan RS, Völker U, Willems SM, Ohlsson C, Wallaschofski H, Kaplan RC. Genomewide meta-analysis identifies loci associated with IGF-I and IGFBP-3 levels with impact on age-related traits. Aging Cell. 2016 Oct;15(5):811-24.

Reviews, Chapters, and Editorials

1. Gauderman W and Kraft P. Family-based case-control studies In: Elston R, Olson J and Palmer L eds. Biostatistical Genetics and Genetic Epidemiology, New York: John Wiley and Sons 2002.

2. Kraft, P. and M. de Andrade, Group 6: Pleiotropy and multivariate analysis. Genet Epidemiol, 2003. 25 Suppl 1: p. S50-6.

3. Kraft, P. and S. Horvath, The genetics of gene expression and gene mapping. Trends Biotechnol, 2003. 21(9): p. 377-8.

4. Kraft, P. and D. Hunter, Integrating epidemiology and genetic association: the challenge of gene-environment interaction. Philos Trans R Soc Lond B Biol Sci, 2005. 360(1460): p. 1609-16.

5. Laird N, Kraft P, Lange C and van Steen K. Testing for association in genetic studies In: Silverman E, Shapiro S, Lomas D and Weiss S eds. Respiratory Genetics, London: Arnold Publishers 2005.

6. Kraft P and Lange C. Statistical Methods in Genetic Epidemiology by Duncan C. Thomas. JASA 2005. 7. Kraft, P and Spiegelman, D. Statistical Issues in Epidemiological Studies of Gene-Environment

Interaction, in: Christiani, D. and Fraser, P. (eds), Gene-Environment Interactions: Role in the Modulation of Pulmonary and Autoimmune Disease Risks, The Biomedical & Life Sciences Collection, Henry Stewart Talks Ltd, London 2007 (online at http://www.hstalks.com/?t=BL0111285-Kraft)

8. Swartz, M.D., D.C. Thomas, E.W. Daw, K. Albers, J.C. Charlesworth, T.C. Dyer, B.L. Fridley, M. Govil, P. Kraft, S. Kwon, M.W. Logue, C. Oh, R. Pique-Regi, L. Saba, F.R. Schumacher, and H.W. Uh, Model selection and Bayesian methods in statistical genetics: summary of group 11 contributions to Genetic Analysis Workshop 15. Genet Epidemiol, 2007. 31 Suppl 1: p. S96-102.

9. Bickeboller, H., K.A. Goddard, R.P. Igo, Jr., P. Kraft, J.P. Lozano, N. Pankratz, Y. Balavarca, C. Bardel, P. Charoen, P. Croiseau, C.Y. Guo, J. Joo, K. Kohler, A. Madsen, D. Malzahn, G. Monsees, M. Sohns, and Z. Ye, Issues in association mapping with high-density SNP data and diverse family structures. Genet Epidemiol, 2007. 31 Suppl 1: p. S22-33.

10. Hunter, D.J. and P. Kraft, Drinking from the fire hose--statistical issues in genomewide association studies. N Engl J Med, 2007. 357(5): p. 436-9.

11. Kraft, P. and D.G. Cox, Study designs for genome-wide association studies. Adv Genet, 2008. 60: p. 465-504.

12. Kraft P. Cox DG. 2008. Optimal Design for Genome-Wide Association Studies. in: Rao DC, Gu CC, editors. Genetic Dissection of Complex Traits. 2nd ed. Boston: Academic Press. p. 465-504

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13. Kraft P, Chen J. 2008. Haplotype Association Analysis. in: Rebbeck TR, Ambrosone CB, Shields PG, editors. Molecular Epidemiology: Applications in Cancer and Other Human Diseases. New York: Informa Healthcare USA, Inc. p. 205-24

14. Kraft, P., Curses--winner's and otherwise--in genetic epidemiology. Epidemiology, 2008. 19(5): p. 649-51; discussion 657-8.

15. Kraft, P. and D.J. Hunter, Genetic risk prediction--are we there yet? N Engl J Med, 2009. 360(17): p. 1701-3.

16. Kraft, P. and S. Raychaudhuri, Complex diseases, complex genes: keeping pathways on the right track. Epidemiology, 2009. 20(4): p. 508-11.

17. Kraft P, Hunter D. The challenge of assessing complex gene-gene and gene-environment interactions. In: Khoury MJ, Bedrosian SR, Gwinn M, Higgins J, Ioannidis J, Little J, editors. Human Genome Epidemiology, 2nd Edition: Building the evidence for using genetic information to improve health and prevent disease. New York: Oxford University Press, 2009.

18. Kraft, P., E. Zeggini, and J.P. Ioannidis, Replication in genome-wide association studies. Stat Sci, 2009. 24(4): p. 561-573.

19. Kraft, P. and C.A. Haiman, GWAS identifies a common breast cancer risk allele among BRCA1 carriers. Nat Genet, 2010. 42(10): p. 819-20.

20. Bennett, S.N., N. Caporaso, A.L. Fitzpatrick, A. Agrawal, K. Barnes, H.A. Boyd, M.C. Cornelis, N.N. Hansel, G. Heiss, J.A. Heit, J.H. Kang, S.J. Kittner, P. Kraft, W. Lowe, M.L. Marazita, K.R. Monroe, L.R. Pasquale, E.M. Ramos, R.M. van Dam, J. Udren, and K. Williams, Phenotype harmonization and cross-study collaboration in GWAS consortia: the GENEVA experience. Genet Epidemiol, 2011. 35(3): p. 159-73.

21. Janssens, A.C., J.P. Ioannidis, S. Bedrosian, P. Boffetta, S.M. Dolan, N. Dowling, I. Fortier, A.N. Freedman, J.M. Grimshaw, J. Gulcher, M. Gwinn, M.A. Hlatky, H. Janes, P. Kraft, S. Melillo, C.J. O'Donnell, M.J. Pencina, D. Ransohoff, S.D. Schully, D. Seminara, D.M. Winn, C.F. Wright, C.M. van Duijn, J. Little, and M.J. Khoury, Strengthening the reporting of genetic risk prediction studies (GRIPS): explanation and elaboration. Eur J Epidemiol, 2011. 26(4): p. 313-37. also published in: J Clin Epidemiol, 2011. 64(8): p. e1-e22. Eur J Hum Genet, 2011. 19(5): p. 18 p preceding 494. Eur J Clin Invest, 2011. 41(9): p. 1010-35.

22. Hamilton, C.M., L.C. Strader, J.G. Pratt, D. Maiese, T. Hendershot, R.K. Kwok, J.A. Hammond, W. Huggins, D. Jackman, H. Pan, D.S. Nettles, T.H. Beaty, L.A. Farrer, P. Kraft, M.L. Marazita, J.M. Ordovas, C.N. Pato, M.R. Spitz, D. Wagener, M. Williams, H.A. Junkins, W.R. Harlan, E.M. Ramos, and J. Haines, The PhenX Toolkit: get the most from your measures. Am J Epidemiol, 2011. 174(3): p. 253-60.

23. Bookman, E.B., K. McAllister, E. Gillanders, K. Wanke, D. Balshaw, J. Rutter, J. Reedy, D. Shaughnessy, T. Agurs-Collins, D. Paltoo, A. Atienza, L. Bierut, P. Kraft, M.D. Fallin, F. Perera, E. Turkheimer, J. Boardman, M.L. Marazita, S.M. Rappaport, E. Boerwinkle, S.J. Suomi, N.E. Caporaso, I. Hertz-Picciotto, K.C. Jacobson, W.L. Lowe, L.R. Goldman, P. Duggal, M.R. Gunnar, T.A. Manolio, E.D. Green, D.H. Olster, and L.S. Birnbaum, Gene-environment interplay in common complex diseases: forging an integrative model-recommendations from an NIH workshop. Genet Epidemiol, 2011.

24. Hamilton, C.M., L.C. Strader, J.G. Pratt, D. Maiese, T. Hendershot, R.K. Kwok, J.A. Hammond, W. Huggins, D. Jackman, H. Pan, D.S. Nettles, T.H. Beaty, L.A. Farrer, P. Kraft, M.L. Marazita, J.M.

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Ordovas, C.N. Pato, M.R. Spitz, D. Wagener, M. Williams, H.A. Junkins, W.R. Harlan, E.M. Ramos, and J. Haines, Hamilton et al. Respond to "Consolidating Data Harmonization". Am J Epidemiol, 2011.

25. Kraft, P., Population stratification bias: more widespread than previously thought. Epidemiology, 2011. 22(3): p. 408-9.

26. Lindstrom, S. and P. Kraft, Commentary: averaged or stratified measures of risk profile discrimination: horses for courses. Epidemiology, 2011. 22(6): p. 813-4.

27. Mechanic LE, HS Chen, CI Amos, N. Chatterjee, NJ Cox, RL Divi, R. Fan, EL Harris, K. Jacobs, P. Kraft, SM Leal, K. McAllister, JH Moore, DN Paltoo, MA Province, EM Ramos, MD Ritchie, K. Roeder, DJ Schaid, M. Stephens, DC Thomas, CR Weinberg, JS Witte, S. Zhang, S. Zöllner, EJ Feuer, and EM Gillanders, Next generation analytic tools for large scale genetic epidemiology studies of complex diseases. Genet Epidemiol, 2012. 36(1):22-35.

28. Aschard, H., S. Lutz, B. Maus, EJ Duell, TE Fingerlin, N. Chatterjee, P. Kraft, and K. Van Steen, Challenges and opportunities in genome-wide environmental interaction (GWEI) studies. Hum Genet, 2012. 131(10):1591-1613.

29. Zaitlen, N. and P. Kraft, Heritability in the genome-wide association era. Hum Genet, 2012. 131(10):1655-1664.

30. Janssens, AC and P. Kraft, Research conducted using data obtained through online communities: ethical implications of methodological limitations. PLoS Med, 2012. 9(10):e1001328.

31. Kraft P, Aschard H. Finding the missing gene-environment interactions. Eur J Epidemiol, 2015. 30(5):353-355.