References

References Cited in Part I

Archer, D.B. (1983) The Microbiological Basis of Process Control inMethanogenic Fermentation of Soluble Wastes. Enzyme Microb. Technol. 5,570-577.

Aris, R. (1989) Elementary Chemical Reactor Analysis. Butterworths,Boston.

Atkinson, B. and Mavituna, F. (1991) Biochemical Engineering andBiotechnology Handbook. 2nd. Ed., Stockton Press, New York.

Bailey, J.E. and Ollis, D.F. (1986) Biochemical Engineering Fundamentals.2nd. Ed., McGraw-Hill, N.Y.

Blanch, H.W. and Dunn, I.J. (1973) Modelling and Simulation in BiochemicalEngineering. Adv. Biochem. Eng, 3, 127-165.

Dekkers, R.M. (1983) State Estimation of a Fed-batch Baker's YeastFermentation., in: Modelling and Control of Biotechnological Processes, (Ed.:A.Halme) Pergamon Press, Oxford, 73.

Denac, M., Miguel, A., Dunn, I.J. (1988) Modeling Dynamic Experiments onthe Anaerobic Degradation of Molasses Wastewater. Biotechnol. Bioeng. 31, 1-10.

Dunn, I.J. and Mor, J.R. (1975) Variable Volume Continuous Cultivation.Biotechnol. Bioeng. 17, 1805-1822.

Dunn, I.J., Shioya, S. and Keller, R. (1979) Analysis of Fed BatchFermentation Processes. Annals N.Y. Acad. ScL 326, 127-139.

Biological Reaction Engineering, Second Edition. I. J. Dunn, E. Heinzle, J. Ingham, J. E. PfenosilCopyright © 2003 WILEY-VCH Verlag GmbH & Co. KGaA, WeinheimISBN: 3-527-30759-1

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Franks, R.G.E. (1966) Mathematical Modeling in Chemical Engineering. Wiley,New York.

Franks, R.G.E. (1973) Modeling and Simulation in Chemical Engineering.Wiley, New York.

Fredrickson, A.G., Megee, R.D., Tsuchita, HM. (1970) Mathematical Modelsfor Fermentation Processes. Adv. Appl. Microbiol. 13, 419-465.

Furukawa, K., Heinzle, E., and Dunn, IJ. (1983) Influence of Oxygen on theGrowth of Saccharomyces cerevisiae in Continuous Culture. Biotechnol.Bioeng. 25, 2293-2317.

Gujer, W., Zehnder, A.J.B. (1983) Conversion Processes in AnaerobicDigestion. Water Sci. Technol. 15, 127-167.

Harder, A., Roels, J.A. (1982) Application of Simple Structured Models inBioengineering. Adv. Biochem. Eng./Biotechnol. 21, 56-107.

Hediger, T. and Prenosil, I.E. (1985) Microprocessor Automated SequentialBatch Process, Biotechnol. Progr.l, 216-225.

Heinzle, E. and Lafferty, R.M. (1980) Continuous Mass SpectrometricMeasurement of Dissolved H2, O2, and CO2 during Chemolitho- autotrophicGrowth of Alcaligenes eutrophus strain H 16. Eur. J. Appl. Microbiol.Biotechnol. 11, 8-16.

Heinzle, E., Furukawa, K., Dunn, I.J., and Bourne, J.R. (1983) ExperimentalMethods for On-line Mass Spectrometry in Fermentation Technology.Bio/Technology 1, 14-16.

Heinzle E. and Dunn I. J. (1991) Methods and Instruments in FermentationGas Analysis, in Biotechnology, Vol 4, (Ed.: H.-J.Rehm and R.Reed). VCH,Weinheim, 27-74.

Heinzle, E. and Saner, U. (1991) Methodology for Process Control in Researchand Development, Ed. Pons, M.-N., in Bioprocess Monitoring and Control.,Hanser, Munich. 223-304.

Heinzle, E., Dunn, IJ. and Ryhiner, G. (1992) Modelling and Control forAnaerobic Wastewater Treatment, Adv. Biochem. Eng., Springer Verlag.

Biological Reaction Engineering, Second Edition. I. J. Dunn, E. Heinzle, J. Ingham, J. E. PfenosilCopyright © 2003 WILEY-VCH Verlag GmbH & Co. KGaA, WeinheimISBN: 3-527-30759-1

182 References

Imanaka, T., Aiba, S. (1981) A Perspective on the Application of GeneticEngineering: Stability of Recombinant Plasmid. Ann. N. Y. Acad. Sci. 369, 1-14.

Ingham, J., and Dunn, I.J. (1991) "Bioreactor Off-Gas Analysis", in "Bioreactorsin Biotechnology", Ed. A. Scragg, Ellis-Horwood, Chichester, 195-220.

Keller, R. and Dunn, I.J. (1978), Computer Simulation of the BiomassProduction Rate of Cyclic Fed Batch Continuous Culture, J. Appl. Chem.Biotechnol. 28, 508-514.

Keller, R. and Dunn, I.J. (1978) Fed Batch Microbial Culture: Models, Errors,and Applications. J. Appl. Chem. Biotechnol. 28, 508-514.

Keller, J., Dunn, I. J. and Heinzle, E. (1991). A Fluidized Bed Reactor forAnimal Cell Culture, in preparation, Biotechnol. Bioeng.

Luyben, W.L. (1973) Process Modeling, Simulation, and Control for ChemicalEngineers. McGraw-Hill.

Meister, D., Post, T., Dunn, I.J. and Bourne, J.R. (1979) Design andCharacterization of a Multistage, Mechanically Stirred Column Absorber.Chem. Eng. Sci., 34, 1376.

Moes, J., Griot, M., Keller, J., Heinzle, E., Dunn, I.J., and Bourne, J.R. (1985) AMicrobial Culture with Oxygen-sensitive Product Distribution as a Tool forCharacterizing Bioreactor Oxygen Transport. Biotechnol. Bioeng. 27, 482-489.

Moes, J., Griot, M., Heinzle, E., Dunn, I.J., and Bourne, J.R. (1986) A MicrobialCulture as an Oxygen Sensor for Reactor Mixing Effects. Ann. N. Y. Acad. Sci.469, 482-489.

Mona, R., Dunn, I.J. and Bourne, J.R. (1979) Activated Sludge ProcessDynamics with Continuous TOC and Oxygen Uptake Measurements.Biotechnol. Bioeng. 21, 1561-1577.

Moser, A. (1988) Bioprocess Technology, Springer, N.Y.

Mou, D.G. and Cooney, C.L. (1983) Growth Monitoring and Control throughComputer-aided On-line Mass Balancing in a Fed-batch PenicillinFermentation. Biotechnol. Bioeng. 25, 225-255.

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Prenosil, J., Dunn, I.J., and Heinzle, E. (1987) Biocatalyst Reaction Engineering,in: Biotechnology Vol.7a, (Ed.: HJ.Rehm and R.Reed) VCH, Weinheim, 489-545.

Roels, J.A. (1983) Energetics and Kinetics in Biotechnology. ElsevierBiomedical Press, Amsterdam.

Ruchti, G., Dunn, I.J., Bourne, J.R. and v. Stockar, U. (1985) PracticalGuidelines for Determining Oxygen Transfer Coefficients with the SulfiteOxidation Method. Chem. Eng. J. 30, 29-38.

Russell, T.W.F., Denn, M.M. (1972). Introduction to Chemical EngineeringAnalysis. Wiley, New York.

Ryhiner, G., Dunn, IJ, Heinzle, E, Rohani S., (1992) Adaptive On-line OptimalControl of Bioreactors: Application to Anaerobic Degradation, J. BiotechnoL.22, 89-106.

Ryhiner, G., Heinzle, E, Dunn, IJ. (1991) Modelling of Anaerobic Degradationand Its Application to Control Design: Case Whey, in: Dechema BiotechnologyConferences Vol.3, (Ed.: Behrens, D. and Driesel, A.J.), 469-474.

Saner, U., Bonvin, D., Heinzle, E. (1990) Application of Factor Analysis forElaboration of Stoichiometry and its On-line Application in Complex MediumFermentation of B. subtilis, in: Dechema Biotechnology Conferences Vol.3,(Ed.: Behrens, D. and Driesel, A.J.), 775-778.

Satterfield, C.N. and Sherwood, T.K. (1963) The Role of Diffusion in Catalysis.Addison-Wesley, N.Y.

Shioya, S., Dang, N.D.P. and Dunn, IJ. (1978). Bubble Column FermenterModeling: A Comparison for Pressure Effects. Chem. Eng. Sci., 33, 1025 -1030.

Tanaka, H. and Dunn, IJ. (1982). Kinetics of Biofilm Nitrification. BiotechnoLBioeng., 24, 669 - 689.

Tanaka, H., Uzman, S., Dunn, IJ. (1981). Kinetics of Nitrification Using aFluidized Sand Bed Bioreactor with Attached Growth. BiotechnoL Bioeng., 23,1683 - 1702.

Ziegler, H., Meister, D., Dunn, IJ., Blanch, H.W., Russell, T.W.F. (1977). TheTubular Loop Fermenter: Oxygen Transfer, Growth Kinetics and Design.BiotechnoL Bioeng. 19, 507.

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Recommended Textbooks and References for Further Reading

Biochemical Engineering

Aiba, S., Humphrey, A.E. and Millis, N.F. (1973) Biochemical Engineering.Academic Press, N.Y.

Atkinson, B. and Mavituna, F. (1991) Biochemical Engineering andBiotechnology Handbook., 2nd. Ed., Stockton Press, New York.

Bailey, I.E. and Ollis, D.F. (1986) Biochemical Engineering Fundamentals.2nd. Ed., McGraw-Hill, N.Y.

Blanch, H.W., Clark, D.S. (1996) Biochemical Engineering; Marcel Dekker,N.Y.

Bu'lock, J. and Kristiansen Eds (1987) Basic Biotechnology Acad. Press,London 1987.

Doran, P. M. (1995) Bioprocess Engineering Principles; Academic PressLimited: London.

Glick, B.R., Pasternak, J.J. (1995) Molekulare Biotechnolgie; Spektrum,Heidelberg.

Grady, C. P. L. and Lim H. C. (1980) Biological Wastewater Treatment, MarcelDekker.

Hastings, A. (1997) Population biology. Concepts and models; Springer, N.Y.

Heinrich, R., Schuster, S. (1996) The Regulation of Cellular Systems; Chapman& Hall, New York.

Klefenz, H. (2002) Industrial Pharmaceutical Biotechnology; Wiley-VCH.

Ladisch, M.R. (2001) Bioseparations Engineering: Principles, Practice andEconomics. Wiley, New York.

Lee, J. M. (1992) Biochemical Engineering. Prentice Hall.

Moo-Young, M., Ed. (1985) Comprehensive Biotechnology, Vols. 1-4Pergamon Press, Oxford.

References 185

Moser, A. (1988) Bioprocess Technology.Springer, N.Y.

Nielsen, J., Villadsen, J. (1994) Bioreaction Engineering Principles. PlenumPress.

Pirt, S. John (1975) Microbe and Cell Cultivation. Blackwell Scientific Publ.,Oxford.

Rehm H.J. and Reed R. Eds (1988) Fundamentals of Biochemical Engineering,in Biotechnology, Vol. 2, VCH, Weinheim,

Roels, J.A. (1983) Energetics and Kinetics in Biotechnology. ElsevierBiomedical Press, Amsterdam.

Schiigerl, K., Bellgardt, H. (Eds.) (2000) Bioreaction Engineering. Springer,Berlin, Heidelberg.

Schiigerl, K. (1987) Bioreaction Engineering. Wiley, New York.

Schiigerl, K. (1994) Solvent Extraction in Biotechnology : Recovery ofPrimary and Secondary Metabolites. Springer, Berlin.

Shuler, M. L., Kargi, F. (2002) Bioprocess Engineering. Basic Concepts;Prentice-Hall.

Spier, R.E., Griffiths, J.B. (1985) Animal Cell Biotechnology. Vol. 1-3,Academic Press.

Wang, D.I.C., Cooney, Ch.L., Demain, A.L., Dunnill, P., Humphrey, A.E., Lilly,M.D. (1979) Fermentation and Enzyme Technology. Wiley, New York.

Wingard, L.B., Jr., Katschalski-Katzir and L. Goldstein Eds (1976-1983)Applied Biochemistry and Bioengineering, Vols. 1-4 Acad. Press, London.

Bioreactor Design and Modelling

Asenjo, J.A., Merchuk, J.C. (1995) Bioreactor system design; Marcel Dekker,N.Y.

Hannon, B., Ruth, B. (1997) Modeling Dynamic Biological Systems; Springer-Verlag, New York.

186 References

Scragg, A.H. (1991). Bioreactors in Biotechnology. Ellis Horwood.

Sinclair, C.G., Kristiansen, B., Bu'Lock, J.D. (1987) Fermentation Kinetics andModelling. Open University Press, Milton Keynes.

Schugerl, K. (1987) Bioreaction Engineering.Vol.1, John Wiley, Chichester.

Subramanian, G. (1998) Bioseparation and Bioprocessing. A HandbookVolume II: Processing, Quality and Characterization, Economics, Safety andHygiene, Wiley-VCH, Weinheim.

van't Riet, K., Tramper, J. (1991) Basic Bioreactor Design. M. Dekker, NewYork.

Vieth, W.R. (1994) Bioprocess Engineering, J. Wiley & Sons, N.Y.

Webb, C., Black, G.M., and Atkinson, B. (1986) Process Engineering Aspects ofImmobilized Cell Systems.Pergamon Press Ltd., Oxford.

Enzyme Engineering and Kinetics

Bisswanger, H. (2002) Enzyme Kinetics. Principles and Methods; Wiley-VCH.

Buchholz, K., Kasche, V. (1996) Biokatalysatoren und Enzymtechnologie,VCH.Weinheim.

Cornish-Bowden, A. (1979) Fundamentals of enzyme kinetics, Butterworth,London.

Drauz, K., Waldmann, H. (1995) Enzyme Catalysis in Organic Synthesis.Volume I. VCH Weinheim.

Drauz, K., Waldmann, H. (1995) Enzyme Catalysis in Organic Synthesis.Volume II. VCH, Weinheim.

Fessner, W.-D. (1999) Biocatalysis - From Discovery to Application, Springer,Berlin.

Godfrey, T., West, S. (1996) Industrial enzymology, Macmillan Press, London.

Hayashi, K.and Sakamoto, N. (1986) Dynamic Analysis of Enzyme Systems,Japan Sci. Soc. Press, Tokyo, Springer Verlag, Berlin.

References 187

Kennedy J. F., Ed. (1987) Enzyme Technology, in Biotechnology Vol. 7a,VCH, Weinheim,

Liese, A., Seelbach, K., Wandrey, C. (2000) Industrial Biocatalysis, Wiley-VCH.

Scheper, T. (1997) Advances in Biochemical Engineering Biotechnology. NewEnzymes for Organic Synthesis, Springer.

Segel, I.H. (1975) Enzyme Kinetics: Behavior and Analysis of RapidEquilibrium and Steady-state Enzyme Systems. Wiley, New York.

Metabolic Engineering

Lee, Papoutsakis (1999) Metabolic Engineering, Marcel Dekker: New York,Basel.

Stephanopoulos, G. N., Aristidou, A. A., Nielsen, J. (1998) MetabolicEngineering. Principles and Methodologies, Academic Press: USA.

Chemical Reaction Engineering

Aris, R. (1989) Elementary Chemical Reactor Analysis. Butterworth Publ.,Stoneham.

Fogler, H. S. (1992) Elements of Chemical Reaction Engineering, Prentice-Hall.

Hagen, J. (1993) Chemische Reaktionstechnik, VCH: Weinheim.

Ingham, J., Dunn, I.J., Heinzle, E., Prenosil, I.E. (2000) Chemical EngineeringDynamics: An Introduction to Modelling and Computer Simulation, VCHVerlagsgesellschaft mbH: Weinheim, Germany,.

Levenspiel, O. (1999) Chemical Reaction Engineering. John Wiley & Sons,New York.

Massart, D. L., Vandeginste, B. G. M., Buydens, L. M. C., de Jong, S., Lewi, P.J., Smeyers-Verbeke, J. (1997) Handbook of Chemometrics and Qualimetrics:Part A, Elsevier: Amsterdam.

188 References

Richardson, J. F., Peacock, D. G. (1994) Coulson & Richardson's ChemicalEngineering. Volume 3: Chemical & Biochemical Reactors & Process Control,Pergamon, Trowbridge.

Satterfield, C.N. and Sherwood, T.K. (1963) The Role of Diffusion in Catalysis,Addison-Wesley, New York.

Modelling and Simulation

Basmadjian, D. (1999) The Art of Modeling in Science and Engineering,Chapman & Hall/CRC: Boca Raton.

Deaton, M. L., Winebrake, J. J. (1999) Dynamic Modelling of EnvironmentalSystems, Springer: New York.

Dodson, C. T. J., Gonzalez, E. A. (1995) Experiments in Mathematics usingMaple, Springer-Verlag: Berlin,

Franks, R.G.E. (1966) Mathematical Modeling in Chemical Engineering. Wiley,New York.

Franks, R.G.E. (1972) Modeling and Simulation in Chemical Engineering.Wiley, New York.

Russell, T.W.F., Denn, M.M. (1972). Introduction to Chemical EngineeringAnalysis. Wiley, New York.

Ruth, M., Hannon, B. (1997) Modeling Dynamic Economic Systems, SpringerVerlag, New York.

Dynamics and Control

Astrom, K.J. and Wittenmark, B. (1989). Adaptive Control. Addison-Wesley,Reading.

Coughanowr D. R. and Koppel L. B. (1965) Process System Analysis andControl. McGraw-Hill, New York.

References 189

Fish, N. M., Fox, R.L, and Thornhill, N.F. (1989) Computer applications infermentation technology: Modelling and control of biotechnological processes.Elsevier, London.

Halme, A. (1983) Modelling and Control of Biotechnical Processes. PergamonPress, Oxford.

Johnson, A. (1986) Modelling and Control of Biotechnological Processes.Pergamon Press, Oxford.

Luyben W. L. (1973) Process Modeling, Simulation, and Control for ChemicalEngineers, McGraw Hill, New York.

Pons, M.-N., Ed.(1991) Bioprocess Monitoring and Control. Hanser, Munich.

Snape, J. B., Dunn, I. J., Ingham, J., Prenosil, J. E. (1995) Dynamics ofEnvironmentel Bioprocesses, VCH Verlagsgesellschaft mbH, Weinheim,.

Stephanopoulos, G. (1984) Chemical Process Control: An Introduction toTheory and Practice, Prentice Hall.

Weber. W. J., Jr., DiGiano, F. A. (1996) Process Dynamics in EnvironmentalSystems, Wiley.