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TENTH EDITION International Student Version T w. GRAHAM SOLOMONS Unive rsity of South Flurida C IG . FRYHLE Pacific Luth eran University JOHN WILEY & SONS, INC.

Pacific Lutheran University - GBV · 17 Carboxylic Acids and Their Derivatives Nucleophil ic Addition-Elimination at the Acyl ... 1.7 Formal Charges and How to Ca/cu/ate ... 3.2 Acid-BaseReactions

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TENTH EDITION

International Student Version

T w. GRAHAM SOLOMONSUnive rsity of South Flurida

C IG . FRYHLEPacific Luth eran University

JOHN WILEY & SONS, INC.

Brief Contents

The Basics Bonding and Mo lecu lar Structure 1

Families of Carbon Compounds Funct ion al Groups, Int ermole cular Forces, and Inf rared (IR)Spectroscopy 53

An Introduction to Organic Reactions and Their Mechanisms Ac ids and Bases 98

l'Jomenclature and Conformations of Alkanes and Cycloalkanes 137

Stereochemistry Chiral Mo lecules 186

lonic Reactions Nucleophilic Substitution and Elimin at ion React ion s of A lky l Halides 230

7 Alkenes and Alkynes I Pro pert ies and Synthesis . Eliminat ion Reacti ons of Alky l Halides 285

Alkenes and Alkynes 11 Add it io n React ions 331

9 Nuclear Magnetic Resonance and Mass Spectrometry Tool s fo r Structure Determ inat ion 385

o Radical Reactions 459

, Alcohols and Ethers Synt hesis and Reacti on s 502

2 Alcohols From Carbonyl Compounds Oxidation-Reduction and O rga nometall ic Co mpounds 548

13 Conjugated Unsaturated Systems 585

14 Aromatic Compounds 632

Reactions of Aromatic Compounds 676

16 Aldehydes and Ketones Nucleophili c Addit ion to the Carbonyl Group 729

17 Carboxylic Acids and Their Derivatives Nucleo phil ic Add it ion-El imi nati on at th e Acyl Carbon 779

18 Reactions at the a Carbon of Carbonyl Compounds Enols and Eno lates 831

19 Condensation and Conjugate Addition Reactions of Carbonyl Compounds Mo re Chemistry of

Enolates 869

20 Amines 911

21 Phenols and Aryl Halides Nucleophi lic Aromatic Subst itut ion 964

Special Topic G Carbon-Carbon Bond-Forming and Other Reactions of Transition MetalOrganometallic Compounds G-1

22 Carbohydrates 1000

23 Lipids 1050

24 Amino Acids and Proteins 1084

25 Nucleic Acids and Protein Synthesis 1131

Answers to Selected Problems A-1

Glossary Gl-1

Photo Credits C-1

Index 1-1

Contents

1 The Basics Bondin g and Mo lecular Structu re 1

1.1 We Are Stardus t 2

1.2 Atomic Structure 2

1.3 The St ruc tura l Theory of Organic Chemistry 5

1.4 Chemical Bonds : The Octet Ru/e 7

1.5 How to Write Le wis Structures 91.6 Exceptions to th e Octet Rule 11

1.7 Formal Charges and How to Ca/cu/ate Them 13

1.8 Re sona nce Theory 15

1.9 Quantum Mechanics and A tomic Structure 20

1.10 Atomic Orbitals and Ele ctron Configuration 21

1.11 MoJecular Orbitals 23

1.12 The Structure of Me thane and Ethane : sp3 Hyb rid ization 2 5

THE CHEMISTRY OF . . . Calcu lated Molecu lar Model s: Electro n Density Surfaces 29

1.13 The Structure of Ethe ne (Ethy lene): sp2 Hyb rid ization 30

1.14 The Structure of Ethyn e (Acetylene): sp Hyb ridization 341.15 A Summary of Im p ortan t Co ncepts that Come from Q uantum Me chanics 36

1.16 Molecular Ge ometry: The Vale nce She ll Ele ctron Pair Re pulsion Mo d el 38

1.17 How to Interpret and Write Str uc tura l Formulas 41

1.1 8 App licatio ns of Basic Princip/ e s 46

Families of Carbon Compounds Functio nal Groups, Intermolecular Forces,

and Infrared (IR) Spectroscopy 53

2.1 Hyd ro carb ons: Re p res ent ativ e A lkanes, A lkenes, Alkyne s, an d A roma tic

Compounds 54

2.2 Polar Co vale nt Bonds 57

THE CHEMISTRY OF . . . Calcu lated Molecular Mod els: Mapsof Elect rostati c Potential 59

2.3 Polar and Nonpolar Mole cu /e s 60

2.4 Funct ion al Groups 62

2.5 A /kyl Halides or Ha/oalkanes 64

2.6 Alcoho/s 65

2.7 Ethers 67

THE CHEMISTRY OF . . . Ethers as Genera l Anesthetics 67

2.8 Amines 68

2.9 Aldehydes and Ketones 69

2.10 Carb oxyl ic Acids, Esters, and Am ides 70

2.11 Nitriles 72

2.12 Summary of Imp o rtan t Fami lie s of Org anic Compounds 722.13 Physical Properties and Mole cular Struc ture 73

THE CHEMISTRY OF . . . Fluorocarbons and Tefl on 78

2.14 Sum ma ry of A ttrac tive Elec tric Force s 82

THE CHEMISTRY OF . . . O rganic Templ ates Eng ineered to Mi mic Bone Growth 82

2.15 fnfrared Spectroscopy: A n Instrum en tal Method for Detecting Functional

Groups 83

2.16 /nterp reting IR Spectra 87

2. 17 A p p /icatio ns of Basic Princip/es 92

Contents

An Introduction to Organic Reactions and The ir MechanismsAcids and Bases 98

3.1 Reactions and Their Mechanisms 99

3.2 Acid-Base Reactions 101

3.3 Lewis Acids and Bases 102

3.4 Heterolysis of Bonds to Carbon : Carbocation s and Carbanions 104

THE CHEMISTRY OF .. . HOMOs and LUMOs in Reactions 105

3.5 How to Use Curved Arrows in Iflustrating Reactions 106

3.6 The Strength of Bransted-Lowry Acids and Bases: Ka and pKa 109

3.7 How to Predict the Outcome of Acid-Base Reactions 113

3.8 Relationships between Structure and Acidity 115

3.9 Energy Changes 119

3.10 The Relationship between the Equilibrium Constant and the Standard Free -EnergyChange, L'.G o 120

3.11 The Acidity of Carboxylic Acids 121

3.12 The Effect of the Solvent on Acidity 125

3.13 Organic Compounds as Bases 126

3.14 A Mechanism for an Organ ic Reaction 127

3.15 Acids and Bases in Nonaqueous Solutions 128

3.16 Acid-Base Reactions and the Synthesis of Deuterium- and Tritium-Labeled

Compounds 130

3.17 Applications of Basic Principles 131

Nomenclature and Conformations of Alkanes and Cycloalkanes 137

4.1 Introduction to Alkanes and Cycloalkanes 138

THE CHEMISTRY OF . .. Petroleum Refining 139

4.2 Shapes of Alkanes 140

4.3 IUPAC Nomenclature of A lkanes, Alkyl Halides, and Alcoho/s 142

4.4 How to Name Cycloalkanes 149

4.5 Nomenclature of Alkenes and Cycloalkenes 151

4.6 Nomenclature of Alkynes 154

4.7 Physical Properties of Alkanes and Cycloalkanes 154

THE CHEMISTRY OF .. . Pheromones: Communication by Mean s of Chemicals 156

4 .8 Sigma Bonds and Bond Rotation 157

4.9 Conformational Analysis of Butane 160

THE CHEMISTRY OF ... Muscle Action 162

4 .10 The Relative Stabilities of Cycloalkanes: Ring Strain 162

4.1 1 Conformations of Cyclohexane: The Chair and the Boat 163

THE CHEM ISTRY OF . .. Nanoscale Motors and Molecular Switches 166

4.12 Substituted Cyclohexanes: Axial and Eq uatorial Hydrogen Groups 167

4.13 Disubstituted Cycloalkanes: Cis-Trans Isomerism 171

4.14 Bicyclic and Polycyclic Alkanes 175

THE CHEMISTRY OF . . . Elemental Carbon 176

4.15 Chemical Reactions of Alkanes 177

4 .16 Synthesis of Alkanes and Cycloalkanes 177

4 .17 How to Gain Structural Information from Mo/ecular Fo rm ulas and the Index ofHydrogen Deficiency 178

4.19 Applications of Basic Principles 181

PLUS See SPECIALTO prC A: 13C NMR Spectr os copy - A Practi cal Introd uct ion in WileyPWS

Contents

5 Stereochemistry Chira l Moleeu les 186

5.1 Chirafity and Stereoch emistry 186

5 .2 Isomerism: Constitutionallsomers and Stereoisomers 188

5.3 Enantiom e rs and Chiral Molecules 190

5.4 A Single Chirality Center Causes a Moleeule to Be Chiral 191

THE CHEMISTRY OF . . . l.ife 's Molecular Handedness 193

5.5 More about the Biofogical Jmportanc e of Chirality 194

5.6 How to Test for Chirality: Planes of Symmetry 195

5.7 Nam ing Enantiomers: The R,S-System 196

5.8 Properties of Enantiomers: Optical Activity 20 1

5.9 The Origin of Optical Activity 205

5.10 The Synthesis of Chiraf M olecules 207

5 .11 Chiral Drugs 209

THE CHEMISTRY OF . .. Selective Binding of Drug Enant iomers to Left- and

Right-Handed Coiled DNA 21 1

5.12 Molecules with More than One Chirality Center 211

5.13 Fischer Proje ct ion Formufas 215

5 .14 Stereois om erism of Cyclic Compounds 217

5.15 Relating Configurations through Reactions in Whi ch No Bonds to the Ch irality

Center A re Broken 219

5.16 Separation of Enantiomers: Resolution 223

5.17 Compounds with ChiraJity Centers Other than Carbon 224

5.18 ChiraJ Mo Jec uJes th at Do Not Possess a ChiraJity Center 224

6 lonic Reactions Nucleophilic Substitut ion and Elimination React ions of A lkyl

Halides 230

6 .1 Organic Halides 231

6 .2 Nucle ophilic Substitution Reaction s 233

6.3 Nucleophiles 234

6.4 Leaving Groups 237

6. 5 Kine tics of a Nucie ophiJic Substitut ion Reacti on : An SN2 Reaction 237

6.6 A Mechan ism for the SN2 Reaction 238

6.7 Transition State Theory: Free-Energy Diag ram s 240

6 .8 The Stereochemistry of SN2 Reactions 243

6 .9 The Re action of tert-Butyl Chloride with Hydroxide Ion: An SN 1 Reaction 246

6.10 A Me chanism for th e SN1 Re action 247

6.11 Carb ocation s 248

6 .12 The Stereochemistry of SN1 Rea ctions 251

6 .13 Factors Affecting the Rates of SN1 and SN2 Reac tions 254

6 .14 Organic Synthesis: Functi on al Group Transformations Using SN2 Rea ctions 264

THE CHEMISTRY OF ... Bio log ical Methylat ion: A Bio log ical Nucieop hilic Subst it ut ionReact ion 266

6. 15 Elimination Reactions of Alkyl Halid es 268

6 .16 The E2 Reaction 269

6.17 The El Reaction 271

6.1 8 How to De te rm ine whether Substitution or Elimination Js Favored 273

6 .19 Overall Summary 276

7 Alkenes and Alkynes I Prop erties and Synthesis. Eliminat ion React ion s of

Alkyl Halides 285

7. 1 Introd uction 286

7.2 The (E)-(Z) System for Des ignating Alkene Diastereomers 286

7. 3 Relative Stabilit ies of Alkenes 288

Contents

7 .4 Cycloalkenes 290

1.5 Synthesi s of A lken es via Elim inat ion Re actions 291

7.6 Dehyd rohalo g en ation of Alkyl Halid e s 291

7 .7 Acid- Catalyz ed Dehydration of Alcohols 297

7.8 Carbocation Stability and the Occ urrenc e of Molecu/ar Rearrangem ents 303

7.9 The A cid ity of Term inal Alk ynes 307

7 .10 Synthe sis o f Alkyn e s by Elimin ation Reaction s 308

7 .11 Rep lace m ent of the Acetylenic Hydrog en Atom of Terminal Al kyn e s 310

7 .12 A lkylatio n of A lkynide An ions: Some Ge neral Principles of Stru ctu re

and Reactivity Illustrated 312

7.13 Hydro gen at ion of A lkenes 313

THE CHEMISTRY OF . . . Hydroge nation in the Foo d Indust ry 3137 .14 Hydrogenat io n: The Fun ct ion of th e Catalys t 314

7.15 Hydro ge nat ion of A/kyn e s 315

7.16 An Introdu ction to O rganic Synthesis 317

THE CHEMISTRY OF .. . From the Inorganic to the O rganic 321

Alkenes and Alkynes 11 Add it ion React ions 331

8.1 Addition Reactions of Alkene s 332

8.2 Ele ct rop hilic Addition of Hydrog e n Halid e s to A lke nes: Mechanism and

Markovn ikov's Rule 334

8.3 Stereochemistry of the lo nic Addition to an A lkene 339

8.4 Addition of Sulfuric Acid to A /ke nes 340

8.5 Addition of Water to Alken es : A cid- Catalyzed Hyd ration 340

8.6 Alcohol s from A lken e s th rou g h Oxymerc uration-Demercuratio n: Markovnikov

Addition 344

8.7 Alcohols from A lke nes throu gh Hyd rob oration-Oxid ation : A nti- Markovnikov Sy n

Hydratio n 347

8.8 Hydrobo ratio n: Synthesis of A lkylboranes 347

8.9 Oxidation and Hyd rolysis of A/k ybo ran e s 350

8.10 Summary of Alkene Hyd ration Me thod s 353

8.11 Protonolysis of A lkyb ora nes 353

8.12 Elect rop hilic Addition of Brom ine and Ch lorine to A lken es 354

THE CHEMISTRY OF . . . The Sea: A Treasury of Biol ogi cally Active Natural

Products 357

8.13 Stereo specific Re actions 358

8.14 Halohyd rin Formation 359

8.15 Divalent Carbon Compounds: Carbenes 36 1

8.16 Oxida tions of Al ken e s: Syn 1,2-Dihydroxylation 363

THE CHEMISTRY OF . . . Catalyt ic Asym metr ie Dih ydroxylation 3658.17 Ox idative Cleavage of Alken e s 365

8.1 8 Electrop hilic Addition of Bromine and Chlorine to A lkyn es 368

8.19 Addition of Hydrog e n Halide s to A lkyn es 369

8.20 Oxida tive Clea vage of Alk ynes 370

8.21 How to Plan a Synthesis: So me Approac hes and Exam pl e s 370

9 Nuclear Magnetic Resonance and Mass Spectrometry Tools for

Structure Determination 385

9. 1 Introdu ction 386

9 .2 Nu clear Magn etic Re sonan ce (N MR) Spec troscopy 386

9.3 How to Interpre t Proton NMR Sp e ctra 392

9.4 Nu clea r Sp in: The O rigin of the Sig nal 395

9.5 Dete cting the Signal: Fourie r Trans form NMR Spectrom eters 397

9.6 Shie /d ing and Deshie ld ing of Proton s 399

Contents

9 .7 The Chemical Shift 400

9 .8 Chemical Shift Equi valent an d Nonequivalent Proto ns 401

9 .9 Signal Splitting: Spin -Spin Coupling 405

9.10 Proton NMR Spectra and Rate Processes 415

9.11 Carb on-7 3 NMR Sp ectroscopy 417

9 .12 Two-Di m ension al (20) NMR Tech nique s 422

THE CHEMISTRY OF . . . Magnetie Resonanee Imaging in Me d ieine 425

9.13 A n Introduction to Mass Spectrometry 426

9.14 Formation of Ions: Elect ron Im p act lonizat ion 427

9.15 Depict ing the Molecu/ar Ion 427

9.16 Fragmentatio n 428

9.17 How to Determine Mole cu/ar Fo rm u/as and MolecuJar Weights Using Mass

Spectrometry 435

9.18 Mass Sp e ctrom ete r Instrument Desig ns 440

9.19 GC/MS Analysis 442

9.20 Mass Sp e ctrom e try of Biom o lec ule s 443

10 Radical Reactions 459

10.1 Introdu ction : How Rad icals Fo rm and Ho w Th ey React 460

10.2 Homolytic Bond Disso ciation Energie s (DW ) 461

10.3 Reaction s of A lkanes with Halog en s 465

10.4 Chlo rination of Metha ne : Me chanism of Re action 467

10.5 Chlorination of Methane: Energ y Changes 470

10.6 Halogenation of Higher Alkanes 477

10 .7 The Geometry of Al kyl Radicals 480

10 .8 Reactions that Generate Tetrahedral Chirality Centers 481

10 .9 Rad ical Ad ditio n to Al ke nes: The A nti-Marko vnik ov Ad dition of Hydrog enBromid e 484

10 .10 Rad ical Polym e rization of Alkenes: Chai n-Gro wth Polyme rs 486

10.11 Other Imp ortan t Radical Reactions 490

THE CHEMISTRY OF ... Calicheamiein 1', 1: A Rad ieal Device for Slicing t he Baekboneof DN A 492

THE CHEMISTRY OF ... Antioxidants 494

THE CHEMISTRY OF .. . Ozone Dep leti on and Ch lorofluo rocarbons (CFCs) 495

PlUDS See SPECIAL TOPIC B: Chain-Growth Polymers in WileyPLUS

11 Alcohols and Ethers Synthesis and Reaetions 502

11.1 Structure and Nom e nclature 503

11 .2 Physical Prop erties of Alcoho/s and Ethers 505

11.3 Imp ortant A lco ho/s and Eth ers 507

THE CHEMISTRY OF . . . Ethanol as a Biofuel 508

11.4 Synthesis of Alcoho/s from A lkenes 509

11 .5 Re action s of A lco ho /s 511

11 .6 A lcoho /s as Acids 513

11.7 Con ve rsion of A lcoho/s into Alkyl Halides 514

11 .8 Al ky l Halid e s from the Re actio n of A lcoho/s with Hydrog e n Halid es 514

11.9 A lkyl Halid e s from the React ion of A lco ho/s with PBr] or SOCI2 517

11 .10 Tosylates, Mesylates, and Triflates: Leaving Group Derivat ives of Alco ho/s 518THE CHEMISTRY OF . . . Al kyl Phosphates 52 1

11.11 Sy nthesis of Ethe rs 522

11.12 Re actions of Ethers 527

11.13 Ep oxid e s 528

THE CHEMISTRY OF . . . The Sharpl ess Asymmetrie Epoxidat ion 529

Content s

11.14 Reactions of Epoxid es 531THE CHEMISTRY OF . . . Epoxide s, Carcinogen s, and Bio logi cal Oxidation 533

11.15 Anti 1,2-Dihydroxy/ation of Alkenes via Epoxid es 535THE CHEMISTRY OF .. . Environmentally Friendly Al kene Oxidation Method s 537

11.16 Crown Ethers 537THE CHEMISTRY OF .. . Transport Anti b ioti cs and Crown Eth ers 539

11.17 Summary of Reaction s of Alkenes, Alcoh ols, and Ethe rs 540

12 Alcohols From Carbonyl Com pounds Oxidat ion-Reduction and

Organom etalli c Compounds 548

12.1 Structure of the Carbonyl Group 549

12.2 Oxidation-Reduction Reaction s in Organ ic Chem istry 55012.3 Alcohols by Reduct ion of Carbonyl Compounds 552

THE CHEMISTRY OF ... Alcohol Dehydrogenase - A BiochemicalHydride Reagent 554

THE CHEMISTRY OF ... Stereosel ecti ve Reductions of Carbo nyl Groups 555

12.4 Oxidation of Alcoh ols 55712.5 Organ ometallic Compounds 561

12.6 Preparation of Organ olithium and Organomagn esium Compounds 56212.7 Reactions of Organ olithium and Organ omagnesium Compounds 56312.8 Alcoho/s from Grignard Reagents 566

12.9 Protecting Groups 575

PLUo See the First Review Problem Set in WileyPLUS

13 Conjugated Unsaturated Systems 585

13.1 Introduct ion 586

13.2 Allylic Substitution and the Allyl Radical 586THE CHEMISTRY O F . . . All ylic Brominat ion 590

13.3 The Stability o f the Allyl Radical 59013.4 The Allyl Cation 59413.5 Resonance The ory Revisited 595

13.6 Alkadienes and Polyunsaturated Hydrocarbon s 599

13.7 1,3-Butadiene: Electron Delocalization 60013.8 The Stability of Conjugated Dienes 60213.9 Ultraviolet-Visible Spectroscopy 604

THE CHEMISTRY OF . . . The Photochem istry of Vision 609

13.10 Electrophific Attack on Conjugated Dienes: 1,4 Addition 61213.11 The Diels-Alder Reaction: A 1,4-Cycloaddition Reaction of Dienes 616

THE CHEMISTRY OF . . . Mole cule s with the Nobel Prize in Their Synth etic Lineage 620

14 Aromatic Compounds 632

14.1 The Discovery of Benzene 63314.2 Nomenclature of Benzene Derivatives 634

14. 3 React ions of Benzene 63714.4 The Kekule Structure for Benzene 63814.5 The Thermodynamic Stability of Benzene 63914.6 Modern Theo ries of the Structure of Benzene 64014.7 Hückel's Rule: The 4n + 2 11" Electron Rufe 64314.8 Other Aromatic Compounds 651

THE CHEMISTRY OF . .. Nanot ubes 655

14.9 Hete rocylic Aromati c Compou nds 655

14.10 Aromatic Compounds in Biochemistry 65714.11 Spectroscopy of Aromatic Compounds 660

Contents

THE CHEMISTRY OF . .. Sunscreen s (Catchi ng the Sun's Rays and What

Happens to Them) 664

15 Reactions of Aromatic Compounds 676

15.1 Efectroph ilic Aromatic Substitution Reaction s 67715 .2 A General Mechanism for Electrophilic Aromatic Substitution 67815.3 Halogenation of Benzene 68015.4 Nitration of Benzene 68115.5 Sulfonation of Benzene 68215.6 Friedel-Crafts Alkylation 68415.7 Friedel-Crafts A cyJation 68515.8 Limitations of Friede l-Crafts Reacti ons 68 7

15.9 Synthetic Applications of Friedel-Crafts Acylation s: The Clemmensen

Reduction 69015.10 Substituents Can Affect Both the Reactivity of the Ring and the Orientation

of the Incom ing Group 69 1

15.1 1 How Substituent s Affect Electrophilic Aromatic Substitution : A CIoser Look 69715.12 React ion s of the Side Chain of A lkylbenzene s 706

THE CHEMISTRY OF lodine Incorporation in Thyroxine Biosynthesis 707

THE CHEMISTRY OF Indu strial Styrene Synthe sis 709

15.13 Alkenylbenzenes 71215.14 Synthetic App/ications 71415.15 AJlyJic and Benzylic Halide s in Nucle op hilic Substitution Reactions 71715.16 Reduction of Aromatic Compounds 719

16 Aldehydes and Ketones Nucleophi lic Addition to the Carbonyl Group 729

16.1 Introduction 73016 .2 Nomenclature of Aldehydes and Keton es 73016 .3 Physicaf Properties 732

THE CHEMISTRY OF . .. A ldehydes and Ketones in Perfumes 733

16.4 Synthesis of Aldehydes 73316.5 Synthesis of Ketones 73816.6 Nucl eophilic Addition to the Carbo n-Oxygen Double Bond 74116.7 The Addition of Alcoh ols: Hemiacetals and Acetals 74416.8 The Addition of Primary and Secondary Amines 751

THE CHEMISTRY OF .. . A Very Versatile Vitamin , Pyridoxine (Vitamin B6) 753

16 .9 The Addition of Hydro gen Cyan ide: Cyanohydrins 755

16. 10 The Addition of Ylides: The W itt ig Rea ction 75716.11 Oxydation of Aldehydes 761

16.12 Chemical Analyse s for Aldehydes and Ketones 76116.13 Spectro scopic Properties of Aldehydes and Ketones 76216.14 Summary of Aldehyde and Ketone Addition Reactions 765

17 Carboxylic Acids and Their Derivatives Nucleoph ilic

Addition-Elimination at the Acyl Carbon 779

17 .1 Introduction 780

17.2 Nomenclature and Physical Properties 78017.3 Preparation of Carboxylic Acids 78917 .4 A cyl Substitution: Nucleophi/ic Addition-Elimination at the Acyl Carbon 79217 .5 Acyl Ch/orides 79417.6 Carboxylic A cid Anhydrides 79617.7 Esters 79717.8 Amides 804

Contents

THE CHEMISTRY OF ... Penicillins 81117.9 Derivatives of Carbonic Acid 812

17.10 Decarboxylation of Carboxylic Acids 814

17.11 Chem ical Tests for Acyl Compounds 816

17.12 Polyes ters and Polyamides: Step -Growth Polymers 817

17.13 Summary of the Reactions of Carboxy/ic Ac ids and Their Derivatives 818

Reactions at the a Carbon of Carbonyl Compounds Enols and

Enolates 831

18.1 The Acidity of the Cl' Hyd rog ens of Carbonyl Compounds: Enolate Anions 832

18.2 Keto and Enol Tautomers 833

18.3 Reactions via Enols and Eno /ate s 834

THE CHEMISTRY OF . . . Chloroform in Drinking Water 839

18.4 Lithium Enolate s 841

18.5 Enolates of ß -Dicarbonyl Co mpounds 844

18.6 Synthesis of Methyl Ketones: The A cetoacetic Ester Snythesis 845

18.7 Syn thesi s of Subs tituted A ce tic A cid s: The Malonic Este r Syn th esis 850

18.8 Further Reactions oi Active Hydrogen Compounds 853

18.9 Synthesis of Enamine s: Stark Enam ine React ions 85418.10 Summary of Enolate Chemistry 857

PLUQS See SPECIAL TOPIC C: Step-Growth Polymers in WileyPLUS

19 Condensation and Conjugate Addition Reactions of CarbonylCompounds More Chem istry of Eno lates 869

19.1 Introduction 870

19.2 The Claisen Condensation : The Synthesis of ß-Keto Este rs 870

19.3 ß -Dicarbony/ Compounds by A cy lat ion of Ke ton e Eno/at e s 875

19.4 Aldol React ions: Addition of Enolat e s and Eno /s to Aldehydes

and Ketones 876

THE CHEMISTRY OF . . . A Retro -A ldol Reaction in Glyco lysis-Div iding Assets toDouble the ATP Yield 878

19.5 Crossed A ld o l Condensations 882

19.6 Cycl izations via Aldol Condensations 888

19.7 Additions to Cl',ß-Unsaturated Aldehyd es and Ket ones 889

THE CHEMISTRY OF . .. Calicheamicin 'Yl1 Activation for Cleavage of DNA 894

19.8 The Mannich Re action 894

THE CHEMISTRY OF . . . A Suic ide Enzyme Substrate 89 5

19.9 Summary of Impo rtant Rea ct ions 897

p~QS See SPECIAL TOP IC 0: Thiols, Sulfur Ylides, and Disulfides in WileyPLUS

PLUQS See SPECIAL TOPIC E: Thiol Esters and Lip id Biosynthesis in WileyPLUS

20 Amines 911

20.1 Nomenclature 912

20.2 Phys ical Prop erti es and St ructure of Amines 913

20.3 Basicity of Amines: Amine Safts 915

THE CHEMISTRY OF . .. Biolo gically Important Amines 922

20.4 Preparation of Amines 924

20.5 Reaction s of Am ines 933

20.6 Reactions of Amines with Nitrous Aci d 935THE CHEMISTRY OF . . . N-Nitrosoami nes 936

20.7 Replacement React ions of Are nediazonium Salts 937

20.8 Coupling Reaction s o f Arenediazon ium Safts 941

)

Contents

20 .9 Reactions of Am ines with Su lfony l Ch lorides 943

THE CHEMISTRY OF . • • Che motherapy and Sulfa Drugs 944

20 .10 Synthesis of Sulfa Drug s 947

20.11 Analysis of Amin es 947

20.12 Elim inations Involving A mm onium Compounds 949

20.13 Summary of Preparations and Reactions o f Amines 950

PLUS See SPECIAL TOPIC F: Alkalo ids in Wi/eyPLUS

21 Phenols and Aryl Halides Nucleophi lic Aromatic Sub stitution 964

21.1 Structu re and Nom e nclature of Phenols 965

21.2 Naturally Occurring Phe nols 966

21 .3 Physical Properties of Phenols 966

21.4 Synthesis of Pheno ls 967

21.5 Reactions o f Phe nols as Acids 969

21.6 Other Reacti ons of the O-H Group of Phe no ls 972

21.7 C1eavage o f Alkyl Aryl Ethers 973

21 .8 Reactions of the Ben zen e Ring of Phen ols 973

THE CHEMISTRY OF ... Polyketide An ticancer Antibiotic Bio syn thesis 975

21.9 The Claise n Rearrang ement 977

21.10 Quino nes 978

THE CHEMISTRY OF .. . The Bombard ier Beet le's Noxio us Spray 979

21.11 Aryl Halides and Nu cleophilic Aromatic Subs titution 980

THE CHEMISTRY OF • • • Bacterial Dehalogenation of a PCB Deri vative 983

21.12 Spectrosco p ic A nalysis of Phen ols and A ryl Halides 988

THE CHEMISTRY OF . • • Aryl Halid es: Their Uses and Environ mental Concerns 989

PLUoS See the Second Review Problem Set in Wi/eyPLUS

SPECIAL TOPIC G: Carbon-Carbon Bond-Forming and Other Reactions of Transition

Metal Organometallic Compounds G-1--..PLUS See SPECIAL TOPIC H: Electrocyclic and Cycloaddition Reactions in Wi/eyPLUS

22 Carbohydrates 1000

22 .1 Introduction 1001

22.2 Monosaccharide s 1004

22.3 Mutarotat ion 1009

22.4 Glycoside Formation 1010

22.5 Other Reactions of Mon osaccharides 1013

22 .6 Oxida tion Reactions of Monosaccharide s 1016

22 .7 Reduction of Monosaccharide s: Aldito/s 1022

22 .8 Reaction s of Mon osaccharide s with Phenylhydrazine: Osazones 1022

22 .9 Synthesis and Degra dation of Mon osaccharides 1023

22 .10 The D Family of Aldoses 1025

22.11 Fischer's Proo f of the Con fig uration of D-(+ )-G/ucose 1027

22.12 Disaccharides 1029

THE CHEMISTRY OF ••• A rtifi cial Sweetener5 (How Sweet It 15) 1032

22.13 Polysaccharide s 1033

22 .14 Othe r Biolog ically Important Sugars 1037

22.15 Suga rs That Contain Nitroge n 1038

22 .16 G/yco lip ids and G/ycoproteins of the Cell Surface: Cell Recognition and theImmune System 1040

22 .17 Carbohydrate Antibiotics 1042

22 .18 Summary of Reactions of Carbohyd rates 1042

Contents

23 Lipids 1050

23.1 Int roduction 105123.2 Fatty Acids and Triacylglyce rols 1052

THE CHEMISTRY OF .. . O lestra and Other Fat Substitutes 1055

THE CHEMISTRY OF . . . Self-Assembled Mon olaye rs- Li pid s in Materials Science andBioengineering 1060

23.3 Terpenes and Te rp enoids 1061

23.4 Steroids 106423.5 Prostaglandins 1073

23.6 Phosph olip ids and Cell Membrane s 1074

THE CHEMISTRY OF . . . STEALTH® Liposomes fo r Drug Delivery 107723.7 Waxes 1078

24 Amino Acids and Proteins 1084

24.1 Introduct ion 1085

24.2 Amino A cids 1086

24.3 Syn thesis of er -A m ino A cids 1092

24.4 Polype ptid e s and Prote ins 109424.5 Prima ry Structure of Polypeptide s and Prot e ins 109724.6 Exam ples of Polypeptide and Protein Prim ary Struc ture 1101

THE CHEMISTRY OF . . . Sickle -Ce ll Anemia 110324.7 Polypep tide and Protein Synthes is 110424.8 Secondary, Tertiary, and Quate rnary Structure of Pro te ins 111024.9 Introduc tion to Enzymes 111524.10 Lyso zyme: Mode of A ction of an Enzyme 1116

THE CHEMISTRY OF ... Carbon ic Anhydrase: Shutt ling the Protons 111924.11 Serine Proteases 1120

24.12 Hemoglobin: A Conjuga te d Protein 1122THE CHEMISTRY OF . . . Some Catalytic Antibodi es 1123

24.13 Purificat ion and Analysis of Polypeptid es and Pro teins 112524.14 Proteom ics 1126

25 Nucleic Acids and Protein Synthesis 1131

25.1 Introduc tion 1132

25 .2 Nu cle otides and Nu cle o sid es 1133

25. 3 Laboratory Syn th es is of Nucleosides and Nu cle otide s 1137

25.4 De oxyrib onucleic Acid: DNA 113925.5 RNA and Protein Syn th esi s 114625 .6 Deter mini ng the Base Se quence of DNA: Th e Cha in-Termi nating

(Dideox ynucleotid e) Meth od 115525.7 Lab orato ry Synthesis of Of igonu cle otid es 1157

25 .8 The Polym erase Chain Rea ction 1158

25.9 Sequenc ing of the Hum an Gen ome: A n Instruction Bo ok for the Mole cule sof Life 1162

Answers to Sele cted Problems Ä-1

Glossary GL-1

Photo Credits C-1

Index 1·1

xviii Contents

Chapt er 3

Reaction of Water with Hydrogen Chloride: The Use of

Curved Arrows 107

Reaction of tert-Butyl Alcohol with Concentrated Aqueous

HCI 127

Chapter 6

Mechanism for the SN2 Reaction 239

The Stereochemistry of an SN2 Reaction 245

Mechanism for the SNl Reaction 248

The Stereochem istry of an SN1 Reaction 252

Mechanism for the E2 Reaction 270

Mechanism for the El Reaction 272

Chapter 7

E2 Elimination Where There Are Two Axial ßHydrogens 296

E2 Elimination Where the Only Axial ß Hydrogen Is from a

Less Stable Conformer 296

Acid-Catalyzed Dehydration of Secondary or Tertiary

Alcohols: An El Reaction 301

Dehydration of a Primary A lcohol : An E2 Reaction 302

Formation of a Rearranged Alkene during Dehydration of a

Primary Alcohol 306

Dehydroha logenation of vic-Dibromides to Form

Alkynes 309

The Dissolving Metal Reduction of an Alkyne 316

Chapter 8

Addition of a Hydrogen Halide to an Alkene 335

Addition of HBr to 2-Methylpropene 337

lonic Addition to an Alkene 339

Acid-Catalyzed Hydration of an Alkene 341

Oxymercuration 345

Hydroboration 349

Oxidation of Trialkylboranes 351

Addition of Bromine to an Alkene 356

Addition of Bromine to cis- and trans-2-Butene 359

Halohydrin Formation from an Alkene 360

Ozonolysis of an Alkene 368

Chapter 10

Hydrogen Atom Abstraction 461

Radical Addition to a 1T Bond 461

Radical Chlorination of Methane 468

Radical Halogenation of Ethane 477

The Stereochemistry of Chlorination at C2 of

Pentane 481

The Stereochemistry of Chlorination at C3 of

(5)-2-Chloropentane 482

Anti-Markovnikov Addition 485

Radical Polymerization of Ethene 487

Chapter 11

Conversion of an Alcohol into a Mesylate (an Alkyl

Methanesulfonate) 520

Intermolecular Dehydration of Alcohols to Form an

Ether 522

The Williamson Ether Synthesis 523

Ether Cleavage by Strong Acids 527

Alkene Epoxidation 529

Acid-Catalyzed Ring Opening of an Epoxide 531

Base-Catalyzed Ring Opening of an Epoxide 531

Chapter 12

Reduction of Aldehydes and Ketones by Hydride

Transfer 554

Chromate Oxidations: Formation of the Chromate

Ester 559

The Grignard Reaction 566

Chapt er 15

Electrophilic Aromatic Bromination 680

Nitration of Benzene 682

Sulfonation of Benzene 683

Friedel-Crafts Alkylation 684

Friedel-Crafts Acylation 687

Benzylic Halogenation 710

Birch Reduction 720

Chapter 16

Reduction of an Acyl Chloride to an Aldehyde 736

Reduction of an Ester to an Aldehyde 737

Reduction of a Nitrile to an Aldehyde 737

Addition of a Strong Nucleophile to an Aldehyde or

Ketone 742

Acid-Catalyzed Nucleophilic Addition to an Aldehyde or

Ketone 742

Hemiacetal Formation 744

Acid-Catalyzed Hemiacetal Formation 745

Base-Catalyzed Hemiacetal Formation 746

Hydrate Formation 746

Acid-Catalyzed Acetal Formation 748

Imine Formation 751

Enamine Formation 754

Cyanohydrin Formation 755

The Wittig Reaction 758

Chapter 17

Acyl Substitution by Nucleophilic Addition-

Elimination 792

Synthesis of Acyl Chlorides Using Thionyl Chloride 795

Acid-Catalyzed Esterification 798

Base-Promoted Hydrolysis of an Ester 801

DCC-Promoted Amide Synthesis 807

Acidi c Hydroly sis of an Amide 808

Basic Hydrolysis of an Amide 808

Acidi c Hydroly sis of a Nitrile 810

Basic Hydrol ysis of a Nitrile 810

Chapter 18

Base-Catalyzed Enoli zati on 835

Acid-Catalyzed Eno lization 835

Base-Promoted Halogenation o f Aldehydes and

Keto nes 837Acid- Catalyzed Halogenat ion of Ald ehyd es and

Keto nes 837

The Haloform React ion 839The Mal oni c Ester Synthesis of Subst ituted Acet ic

Acids 850

Chapter 19

The Claisen Con den sat ion 871

The Dieckmann Cond ensati on 873

The Al dol Addition 877

Dehyd rati on of the A ldol Ad dition Prod uct 879

The Acid- Cat alyzed Aldol React ion 880

A Directed A ldo l Synt hesis Using a Lithi um Enola te 886The Aldol Cycl ization 889

Contents

The Con jugate Additi on of HCN 891

The Conjugate Addition of an Amine 892

The Michae l Addi ti on 892

The Mann ich Reacti on 895

Chapter 20

Al kylati on of NH J 925Red uct ive Amin ati on 928

The Hofmann Rearrang em ent 931

Diazotization 936

Chapter 21

The Kolbe Reacti on 975

The SNAr Mechanism 982The Benzyne Elim inati on-Additi on Mechanism 985

Chapter 22

Form at ion of a Gl ycoside 1011

Hyd roly sis of a Glycoside 1012

Phenylo sazone Formati on 1023

Chapter 24

Formati on of an a- Amino nitr ile during the St recke r

Synthesis 1093

xix

THE CHEMISTRY OF ... SaXES

Chapter 1

Calculated Molecular M od els: Electron Density

Surfaces 29

Chapter 2

Calculated Mole cular Mo del s: Maps of Electrostat icPoten tia l 59

Ethers as General Anestheti cs 67

Fluorocarbon s and Teflon 78

Organic Tem pla tes Eng ineered to Mi mic Bone Growth 82

Chapter 3

HOMOs and LUMOs in Reacti on s 105

Chapter 4

Pet role um Refining 139

Pherom on es: Comm unicati on by Means of Chemica ls 156

Muscle Action 162Nanoscale Motors and Mole cular Switches 166

Elemen tal Carbon 176

Chapter 5

Life's Molecular Hand edness 193

Select ive Bind ing of Drug Enant iomers to Left - and Righ t­

Handed Co iled DNA 211

Chapter 6

Biologi cal M et hylati on: A Biologi cal Nucleop hili c

Subst itution Reaction 266

Chapter 7

Hydroge nat ion in the Food Industry 31 3From the lnorgan ic to the O rganic 321

Chapter 8

The Sea: A Treasury of Biol ogi cal ly Activ e Natural

Produ cts 357

Cata lytic Asymmetric Dihyd roxylat ion 365

Chapter 9

Magn eti c Reson ance Imaging in Med icine 425

Chapter 10

Calicheamicin 1'11: A Radica l Device for Slicing th e

Backb one of DNA 492

Ant iox ida nts 494Ozone Depl etion and Chlo rof luorocarbons (CFCs) 495

Chapter 11

Ethanol as a Biofuel 508

Alk yl Phosph ates 521

xx Contents

The Sharpless Asymmetr ie Epoxidat ion 529

Epoxides, Carcinogens , and Biol og ieal

Ox idation 533

Environmentally Friend ly A lkene OxidationMethods 537

Transport Antib iot ies and Crown Ethers 539

Chapter 12

Aleohol Dehydroge nase-A Bioehemieal Hydride

Reag ent 554

Stereo selective Red uct ions of Carbonyl Groups 555

Chapter 13

Allylic Bromination 590

The Photochemistry of Vision 609

Molecules with the Nobel Prize in Their Synthet ic

Lineage 620

Chapter 14

Nanotubes 655

Sunscreens (Catehing the Sun's Rays and What Happens toThem) 664

Chapter 15

lod ine Incorporation in Thyroxine Biosynthesis 707Industr ial Styrene Synthesis 709

Chapter 16

Aldehydes and Ketones in Perfumes 733

A Very Versat ile Vitamin, Pyridoxine (Vitamin B6) 753

Chapter 17

Penicillins 81 1

Chapter 18

Chloroform in Drinking Water 839

Chapter 19

A Retro-A ldol Reaetion in Glyeolysis-Divid ing Assets toDoub le the ATP Yield 878

Cal icheam icin y,' Act ivat ion for Cleavage of DNA 894A Suicide Enzyme Substrate 895

Chapter 20

Biologi cally Important Amines 922N-Nit rosamines 936

Chemotherapy and Sulfa Drugs 944

Chapter 21

Poly ket id e Anti eaneer Antibi oti e Biosynthesis 975

The Bombardi er Beetle's No xious Spray 979

Baeterial Dehalogenati on of a PCB Derivati ve 983

Aryl Halides: Thei r Uses and Environme ntal Co ncerns 989

Chapter 22

Artificial Sweeteners (How Sweet It Is) 1032

Chapter 23

Oles tra and Other Fat Substitutes 1055

Self-Assembled Monolayers-Lipids in Materials Science

and Bioeng ineering 1060

STEALTH® Liposomes for Drug Delivery 1077

Chapter 24

Sickle-Cell Anemia 1103

Carbonic An hydra se: Shuttling the Protons 1119

Some Cata lyt ic Ant ibodies 1123