39
dans.knaw.nl DANS is een instituut van KNAW en NWO Open Science in Practice Making Data FAIR with Open Repositories in the Netherlands and Beyond Cees Hof Ricarda Braukmann OpenMRBenelux 2019

Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

  • Upload
    others

  • View
    2

  • Download
    0

Embed Size (px)

Citation preview

Page 1: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

dans.knaw.nlDANS is een instituut van KNAW en NWO

Open Science in Practice

Making Data FAIR with Open Repositories in the Netherlands and Beyond

Cees HofRicarda Braukmann

OpenMRBenelux 2019

Page 2: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS is about keeping data FAIR

Institute of Dutch Academy and Research

Funding Organisation

(KNAW & NWO) since 2005

First predecessor dates back to

1964 (Steinmetz Foundation),

Historical Data Archive 1989

Mission: promote and

provide permanent

access to digital research resources

Page 3: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS core data services

NARCIS: Gateway to scholarly information In the Netherlands

DANS core data services

DataverseNL for short / intermediate term storage (including RDM during research)

EASY: long-term Electronic Archiving System for self-deposit

Page 4: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Training by DANS

In the context of many H2020 projects…

At the national level…

Page 5: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS is sharing and gaining expertise through projects

Page 6: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

• Open Science has become a policy priority: not only publications need to be openly accessible, but also other research outputs (data, software)

• Research funders and institutes increasingly require researchers to describe how they deal with data in a “Data management Plan” (DMP)

• Principle: open if possible, protected if necessary• Legitimate restrictions to openness:

• to protect privacy• data creator must be able to publish first

• Openness itself is not enough, data must also be:• Findable F• Accessible A• Interoperable I• Reusable R

Open Science Movement

Page 7: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

To find your way through the publications & data forest….

Catalogues like NARCIS are finding tools ….

Page 8: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open science in Europe….

https://www.eosc-portal.eu

EuropeanOpen ScienceCloud

Started in 2015 with the idea of Open Innovation, Open Science and Open to the World.

272 M€ H2020 budget

Page 9: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open science in Europe….

EOSC intends to ‘interlink people, data, services and trainings, publications, projects and organisations across borders and scientific disciplines’

doi:10.2777/112658

Minimum Viable Ecosystem (MVE) of the EOSC:

only if some basic technical, political and human resources conditions are met. From a technical perspective, interoperable services and open data must be guaranteed……

Page 10: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open science promotion DANS & Partners

National OpenAIRE node (NOAD)

National RDA node

Page 11: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open science in The Netherlands…

https://www.openscience.nl/en

2003:Berlin Declaration on Open Access to Knowledge in the Sciences and Humanities

2007:OECD Principles and Guidelines for Access to Research Data from Public Funding

2014:The Hague Declaration on Knowledge discovery in the digital age

Good intentions....NL signed:

2017: National Plan Open Science

Page 12: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open science landscape in The Netherlands…

Funders:• NWO• KNAW• ZonMw

Academic organisations:• VSNU• Vereniging Hogescholen• Promovendi Netwerk Nederland • De Jonge Akademie• Nederlandse Federatie van

Universitair Medische Centra (NFU)

Libraries:• Koninklijke Bibliotheek (KB)• Universiteitsbibliotheken

Service providers:• SURF • Netherlands eScience Center (NLeSc)

Repositories and data centres:• Data Archiving and Networked Services

(DANS)• 4TU.Centre for Research Data

Thematic (data) organisations:• GO FAIR• Dutch Techcentre for Life Sciences (DTL)• Landelijk Coördinatiepunt Research Data

Management (LCRDM)

CORE e-INFRASTRUCTURE

Page 13: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open science is not something new (as are FAIR data…)

Global Biodiversity Information System (GBIF)

+15 years old international network for open biodiversity data

Lessons learned:- Strength of distributed networks with central

portal- Technology versus capacity building (technology

should not be leading)- The dos and don’ts of developing standards- FAIR data avant la lettre- …….

www.gbif.org

Page 14: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS and the Life Sciences

Back-up service for Dryad(metadata visible in EASY)

Recent projects:

Connecting Life Science databases to NARCIS Volksgezondheidenzorg.info

Making DANS repository services more life science compatible / friendly

Implementation FAIR Data Point

Page 15: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS and the Life Sciences

Open Science symposium and workshops (December 2017)

With:• NIOO• UVA• Naturalis• DTL

Page 16: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS and the Life Sciences

Symposium on

Research Objects

at IEEE

symposium

Amsterdam

(October 2018)

With:

• University of

Manchester

• Poznan

Supercomputing

and Networking

Center http://www.researchobject.org/ro2018/ro2018-proceedings/

Page 17: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

DANS and the MR community?

DANS is a DTL & ZonMw Technology Hotel

Possibilities to finance your data storage requirements

Next call medio 2019

Page 18: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open Science in the (MR) Data Life Cycle

CESSDA Data Management Expert Guide: cessda.eu/DMEG- Provides information on Research Data Management - For Social Sciences but also covers general topics- Includes a Data Management Checklist

Page 19: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open Science in the (MR) Data Life Cycle

Page 20: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Open Science in the (MR) Data Life Cycle

MR specific issues- Large files - Different types of data belonging together- Data has formats that (can) require specific software

Page 21: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Plan

Planning your research.

Points of attention:- If you use existing data remember to check the conditions- Budget costs for storing and archiving data

For your Data management Plan (DMP) consider:• The DTL / ELIXIR Data Stewardship Wizard• DMPonline• easyDMP• …..

Page 22: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Organize & Document

How do you document and organize data?

Points of attention:- How do you organize files that belong together?- How do you name your files?- How to describe your data so others understand?- Use existing metadata-standards

- Brain Imaging Data Structure Specification (BIDS)- RDA metadata directory- FAIRsharing search page

Page 23: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Process

How do you process your data?

Points of attention:- What different file types will you use?

- Can they be converted into other (open) formats?- Do they need additional software?

- How do you version your data?

Page 24: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Store

What about storage, backup and security?

Points of attention:- What is your institute policy?- Does your institute have the facilities you need?- Who is allowed to access the data?

Page 25: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Protect

What are ethical and legal considerations?

Points of attention:- Gain informed consent from your participants

- Include data sharing!- Minimize the amount of personal data

- remove facial features- avoid storing names, date of birth, etc.

Page 26: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Archive & Publish

How do you archive and publish your data?

Points of attention:- Check out where your data can be published

- Consider size and format of the data- Is a repository trustworthy?

- What happens to your data?- Where is it stored?

Page 27: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Discover

How can you find data to reuse?

https://openeuroscience.com/data-collaboration-projects/neuroimaging-databases/

Page 28: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

Interaction Time!

Take your smartphone and

Go to www.menti.comUse the code: 34 72 35

Or

Go directly to https://www.menti.com/9ea337c3

Page 29: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 30: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 31: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 32: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 33: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 34: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 35: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 36: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 37: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea
Page 38: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

dans.knaw.nlDANS is een instituut van KNAW en NWO

Page 39: Open Science in Practice · NARCIS: Gateway to scholarly information In the Netherlands DataverseNL for short / intermediate term storage (including ... Started in 2015 with the idea

dans.knaw.nlDANS is een instituut van KNAW en NWO

Thank you for your attention!

[email protected]

[email protected]

@DANSKNAW