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Nuclear Magnetic Resonance Spectroscopy Spectroscopy in Inorganic Chemistry

Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

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Page 1: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Nuclear Magnetic Resonance Spectroscopy

Spectroscopy in Inorganic Chemistry

Page 2: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Spin-Spin Coupling

93/01/20 Ferdowsi University of Mashhad 85

Nuclei experiencing the same chemical environment or

chemical shift are called equivalent. Those nuclei

experiencing different environment or having different

chemical shifts are nonequivalent. Nuclei which are close to

one another exert an influence on each other's effective

magnetic field. This effect shows up in the NMR spectrum

when the nuclei are nonequivalent. If the distance between

non-equivalent nuclei is less than or equal to three bond

lengths, this effect is observable. This effect is called spin-spin

coupling or J coupling.

NMR

Page 3: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 86

aligned with the external field such that the fields called spin

up

opposed to the external field such that the fields are called

spin down

NMR

Page 4: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 87

There are a total of four possible configurations for the two nuclei in a magnetic field.

In NMR, an allowed transition is one where the spin of one nucleus changes from spin up to spin down , or spin down to spin up .

NMR

Page 5: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 88

The NMR spectrum for nuclei A and B reflects the splittings

observed in the energy level diagram. The A absorption line

is split into 2 absorption lines centered on A, and the B

absorption line is split into 2 lines centered on B. The distance

between two split absorption lines is called the J coupling

constant or the spin-spin splitting constant and is a measure

of the magnetic interaction between two nuclei.

NMR

Page 6: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 89

NMR

Page 7: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 90

NMR

The Doublet in 1H NMR

C C

HH

B0

a b

Ha splits into a 1:1 doublet peak

Hb is parallel or anti-parallel to B0

Ha is coupled to Hb

Page 8: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 91

NMR

Page 9: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

The Triplet in 1H NMR

93/01/20 Ferdowsi University of Mashhad 92

NMR

C C

H

H

H

B0

a b

Ha splits into a 1:2:1 triplet peak

Hb can both be parallel, anti-parallel

Ha is coupled to Hb and Hb

b

or one parallel and one anti-parallel

Page 10: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 93

Page 11: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 94

NMR

Ha in 1,1,2-Tribromoethane

Page 12: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 95

NMR

Page 13: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 96

NMR

The Quartet in 1HMR

B0

C

H

C

H

H

H

proton splits into n+1

n = # adjacent H'squartet 1:3:3:1

shieldeddeshielded

Chemical Shift

Page 14: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 97

When there are two different types of nuclei three bonds

away there will be two values of J, one for each pair of nuclei.

By now you get the idea of the number of possible

configurations and the energy level diagram for these

configurations, so we can skip to the spectrum. In the

following example JAB is greater JBC.

NMR

Page 15: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

The N + 1 Rule

93/01/20 Ferdowsi University of Mashhad 98

NMR

Page 16: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Spin-Spin Splitting Distance

93/01/20 Ferdowsi University of Mashhad 99

Equivalent protons do not split each other.

Protons bonded to the same carbon will split each other if

they are nonequivalent.

Protons on adjacent carbons normally will split each other.

Protons separated by four or more bonds will rarely split

each other.

NMR

Page 17: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Magnetization vector

93/01/20 Ferdowsi University of Mashhad 100

NMR

Page 18: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 101

NMR

Page 19: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 102

NMR

+1/2

-1/2

E 400 MHz300 MHz200 MHz100 MHz

23,500 47,000 70,500 104,000

parallel

antiparallel

inc. magnetic field strength, Gauss

B0

Page 20: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Self study

93/01/20 Ferdowsi University of Mashhad 103

J-Coupling When spin A of a nucleus is coupled to a spin B, it can 'sense' the position of that spin in the B0 field. If spin B is with the field, spin A resonates at a frequency different from when spin B is against the field. The population of A spins is therefore split into two. The red magnetisation vector represents one of these sub-populations and runs faster than the rotating frame; the blue one represents the other population and runs more slowly. The frequency difference between the vectors is the J-coupling. In 1/J seconds, each vector turns 180 degrees and they meet at the -Y axis.

NMR

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NMR Experiment

93/01/20 Ferdowsi University of Mashhad 104

NMR

Page 22: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Magnet

93/01/20 Ferdowsi University of Mashhad 105

NMR

Page 23: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 106

NMR

Page 24: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Field Lock

93/01/20 Ferdowsi University of Mashhad 107

NMR

Page 25: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Shim Coils

93/01/20 Ferdowsi University of Mashhad 109

The purpose of shim coils on a spectrometer is to correct

minor spatial inhomogeneities in the Bo magnetic field

NMR

Page 26: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Sample Probe

93/01/20 Ferdowsi University of Mashhad 110

NMR

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93/01/20 Ferdowsi University of Mashhad 111

NMR

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93/01/20 Ferdowsi University of Mashhad 112

NMR

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93/01/20 Ferdowsi University of Mashhad 113

NMR

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93/01/20 Ferdowsi University of Mashhad 114

NMR

Solid State Sample Rotors

NMR Sample Tubes with Caps

Page 31: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

RF Coils

93/01/20 Ferdowsi University of Mashhad 115

NMR

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Gradient Coils

93/01/20 Ferdowsi University of Mashhad 116

NMR

Page 33: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Quadrature Detector

93/01/20 Ferdowsi University of Mashhad 117

The quadrature detector is a device which separates out the

Mx' and My' signals from the signal from the RF coil.

NMR

Page 34: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Digital Filtering

93/01/20 Ferdowsi University of Mashhad 118

NMR

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93/01/20 Ferdowsi University of Mashhad 119

NMR

Safety Precautions:

Very Very

Strong Magnetic Field! 5G 10G

Page 36: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

FOURIER TRANSFORMS

93/01/20 Ferdowsi University of Mashhad 121

NMR

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93/01/20 Ferdowsi University of Mashhad 122

A magnetization vector, starting at +x, is rotating about the

Z axis in a clockwise direction. The plot of Mx as a function

of time is a cosine wave.

NMR

Page 38: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 123

Fourier transforming this gives peaks at both + and - because

the FT can not distinguish between a + and a - rotation of the

vector from the data supplied

NMR

positive

Page 39: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 124

Fourier transforming this gives peaks at + and - because the

FT can not distinguish between a positive vector rotating at

+ and a negative vector rotating at - from the data supplied.

NMR

negative

Page 40: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 125

The solution is to input both the Mx and My into the FT. The

FT is designed to handle two orthogonal input functions

called the real and imaginary components.

NMR

Page 41: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 126

Detecting just the Mx or My component for input into the FT is called linear detection. This was the detection scheme on many older NMR spectrometers and some magnetic resonance imagers. It required the computer to discard half of the frequency domain data

NMR

Page 42: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 127

Detection of both Mx and My is called quadrature detection

and is the method of detection on modern spectrometers and

imagers. It is the method of choice since now the FT can

distinguish between + and -, and all of the frequency domain

data be used.

NMR

Page 43: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 128

An FT is defined by the integral Think of f(ω)as the overlap of f(t) with a wave of frequency .

This is easy to picture by looking at the real part of f(ω) only . Consider the function of time, f( t ) = cos( 4t ) + cos( 9t (

NMR

Page 44: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

ω=1

93/01/20 Ferdowsi University of Mashhad 129

NMR

Page 45: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

2=ω

93/01/20 Ferdowsi University of Mashhad 130

NMR

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93/01/20 Ferdowsi University of Mashhad 131

NMR

3=ω

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93/01/20 Ferdowsi University of Mashhad 132

NMR

4=ω

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93/01/20 Ferdowsi University of Mashhad 133

NMR

5=ω

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93/01/20 Ferdowsi University of Mashhad 134

NMR

6=ω

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93/01/20 Ferdowsi University of Mashhad 135

NMR

7=ω

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93/01/20 Ferdowsi University of Mashhad 136

NMR

8=ω

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93/01/20 Ferdowsi University of Mashhad 137

NMR

9=ω

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93/01/20 Ferdowsi University of Mashhad 138

NMR

10=ω

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f(ω)

93/01/20 Ferdowsi University of Mashhad 139

NMR

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93/01/20 Ferdowsi University of Mashhad 140

The inverse Fourier transform (IFT) is best depicted as an

summation of the time domain spectra of frequencies in f(ω)

NMR

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Phase Correction

93/01/20 Ferdowsi University of Mashhad 141

The actual FT will make use of an input consisting of a REAL and an

IMAGINARY part. You can think of Mx as the REAL input, and My as the

IMAGINARY input. The resultant output of the FT will therefore have a REAL

and an IMAGINARY component, too.

NMR

Page 57: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

93/01/20 Ferdowsi University of Mashhad 142

In an ideal NMR experiment all frequency components contained in the

recorded FID have no phase shift. In practice, during a real NMR experiment a

phase correction must be applied to either the time or frequency domain

spectra to obtain an absorption spectrum as the real output of the FT.

NMR

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93/01/20 Ferdowsi University of Mashhad 143

If the above mentioned FID is recorded such that there is a 45o phase shift in the

real and imaginary FIDs,

the coordinate transformation matrix can be used with = - 45o. The corrected

FIDs look like a cosine function in the real and a sine in the imaginary.

NMR

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93/01/20 Ferdowsi University of Mashhad 144

finally

NMR

Page 60: Nuclear Magnetic Resonance Spectroscopyr.takjoo.profcms.um.ac.ir/imagesm/1006/stories/Spectroscopy/Secti… · Nuclear Magnetic Resonance Spectroscopy . Spectroscopy in Inorganic

Fourier Pairs

93/01/20 Ferdowsi University of Mashhad 145

A Fourier pair is two functions, the frequency domain form

and the corresponding time domain form. The amplitude of

the Fourier pairs has been neglected since it is not relevant in

NMR.

NMR

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93/01/20 Ferdowsi University of Mashhad 146

Constant value at all time

NMR

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NMR

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93/01/20 Ferdowsi University of Mashhad 148

NMR

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NMR

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93/01/20 Ferdowsi University of Mashhad 150

NMR

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93/01/20 Ferdowsi University of Mashhad 151

NMR

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The Two-Dimensional FT

93/01/20 Ferdowsi University of Mashhad 152

The two-dimensional Fourier transform (2-DFT) is an FT

performed on a two dimensional array of data

NMR

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NMR

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NMR

Isotope

Nat.

Abundanc

e %

Magnetogyri

c ratio ()

107 rad T-1 s-1

Relative

NMR

frequenc

y (MHz)

Rel.

Receptivi

ty

117Sn

7.6

-9.578

35.6

3.5 * 10-3

119Sn

8.6

-10.021

37.3

4.5 * 10-3

125Te

7.0

-8.498

31.5

2.2 * 10-3

129Xe

26.4

-7.441

27.8

5.7 * 10-3

169Tm

100.0

-2.21

8.3

5.7 * 10-4

171Yb

14.3

4.712

17.6

7.8 * 10-4

183W

14.4

1.120

4.2

1.1 * 10-5

187Os

1.6

0.616

2.3

2.0 * 10-7

195Pt

33.8

5.768

21.4

3.4 * 10-3

199Hg

16.8

4.8154

17.9

9.8 * 10-4

203Tl

29.5

15.436

57.1

5.7 * 10-2

205Tl

70.5

15.589

57.6

1.4 * 10-1

207Pb

22.6

5.540

20.9

2.0 * 10-3

SPIN 1/2

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NMR