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RHODOPSIN REVELATION Crystal structure at 2.8-A resolution reveals details of transmembrane visual pigment
Ahigh-resolution X-ray structure of rhodopsin reveals some unexpected features in the visual pig
ment and confirms many others that researchers had deduced indirectly. Rhodopsin—the protein in the retina that captures light, triggering a biochemical cascade that the brain interprets as sight—is the first member of the large and important family of G-protein-coupled receptors (GPCRs) to have its crystal structure determined.
The feat of determining rhodopsin's three-dimensional structure was accomplished by a team including Krzysztof Palczewski, professor of chemistry and of ophthalmology and adjunct professor of pharmacology, and Ronald E. Sten-kamp, associate professor of biological structure, both at the University of Washington, Seattle; and Masashi Miya-no of the Structural Biophysics Laboratory, RIKEN Harima Institute in Hyogo, Japan [Science, 289, 739 (2000)].
Like other GPCRs, rhodopsin is a transmembrane protein with seven characteristic a-helices that span the cell membrane. The molecules detect stimuli such as calcium ions, hormones, neurotransmitters, or photons outside of a cell, then relay a signal to the cell's interior, where particular GTP-binding proteins (G-proteins) are activated. The receptors are prime targets for drug therapy.
Membrane proteins are notoriously difficult to coax into crystals good enough for X-ray structure studies. Rhodopsin is especially tough: light causes its crystals to fall apart, even at 4 °C. "The field has been waiting for a crystal structure of rhodopsin for more than 20 years," comments Daniel Oprian, professor of biochemistry at Brandeis University, Waltham, Mass., whose own research focuses on the structure and function of visual pigments.
Palczewski credits postdoc Tetsuji Okada for persevering until he found a successful way to grow high-quality rhodopsin crystals [/. Struct. Biol, 130,73 (2000)]. Okada worked for two years in
Loops at the cytoplasmic (top) and extracellular (bottom) ends connect rhodopsin9s seven transmembrane a-hellces.
the lab's cold room in the dark. "You wouldn't find many people who could stand that," Palczewski tells C&EN.
Okada then took his most perfect crystals to synchrotron beam lines at
Stanford University; the Advanced Photon Source at Argonne National Laboratory; and the Japan Synchrotron Radiation Research Institute, Hyogo. The "bright" X-ray data allowed the researchers to obtain rhodopsin's structure at a resolution of 2.8 A.
The "amazingly simple" arrangement of the three loops and carboxyl end that make up the cytoplasmic surface of rhodopsin is one surprising aspect of the protein's structure, Palczewski says. "The connecting loops are very short They are not sticking out like you'd expect in order to interact with a G-protein."
He points out, however, that the structure reflects rhodopsin's inactive state, as it is in the dark. When light strikes the molecule, its chromophore—11-cis-retinal bound deep within the membrane-spanning helices—isomerizes to the all-trans configuration. And as the protein adjusts to the shifting shape of the chromophore, significant conformational changes likely are transmitted to the cytoplasmic side.
The crystal structure proves correct many hypotheses about rhodopsin that had been previously developed. "Many key findings from extensive interdisciplinary studies—mainly combining site-directed mutagenesis with biophysical approaches—seem to be confirmed," says Thomas P. Sakmar, Howard Hughes Medical Institute associate investigator and head of the Laboratory of Molecular Biology & Biochemistry at Rockefeller University, New York City.
The rhodopsin structure probably will provide a reliable template for most of the other GPCRs, Oprian notes. "I believe that the different receptors represent relatively minor variations on a common evolutionary theme," he says.
Pamela Zurer
NSF Urged To Expand Science Awareness Expanding public awareness of science and engineering is a critical task for the National Science Foundation, concludes a committee of the National Science Board (NSB) that has been studying the issue. The committee's report on science communication by the agency was approved by NSB, the agency's governing body, at its meeting last week in Arlington, Va.
"For the first time, NSF has recognized the need to communicate science and engineering," says M. R. C. Greenwood, chair of the NSB Committee on
Communication & Outreach. Greenwood, a professor of biology, is chancellor of the University of California, Santa Cruz. The effort, she says, will include public relations but also will encompass education and work with advocacy groups for science and engineering.
One such group, Greenwood says, is Research America, Alexandria, Va., whose efforts on behalf of biomedical research have helped to secure dramatic budget increases for the National Institutes of Health. Among other tactics, Research America uses results from
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public polling to influence congressional appropriators.
The NSB report, says David L Schutt, assistant director of legislative and government affairs at the American Chemical Society, reinforces the need for similar advocacy on behalf of the physical sciences and engineering. At a time when Congress has been holding steady or even cutting federal fiinding for the physical sciences and engineering, he says, "we need a Madison Avenue-type approach."
And efforts are under way to create an organization that will do just that, Greenwood Schutt continues. Under the direction of American Association for the Advancement of Science President Mary L Good, concerned members of the mathematics, physical sciences, and engineering communities have marshaled their resources to raise money and support for such an organization.
'The idea is to raise awareness and understanding," Schutt says. "People don't personally believe that science
and engineering have dramatically improved their lives."
Greenwood says there will be changes at NSF as a result of her committee's re
port, which provides a series of overarching recommendations. For example, there will be assessments of the effectiveness of agency resources devoted to public awareness, she says, and there will likely be some internal reorganization aimed at increasing collaborations across NSF directorates.
The use of metrics— public opinion polls, most likely—to assess gains in public under
standing of science and engineering will move the effort beyond public relations.
"We will look at knowledge-base gains among the general public for science and engineering," for example, Greenwood says. "We will look at the importance parents place on science and math education. Those are measurable outcomes."
William Schulz
BASF Takes On Takeda Vitamins BASF has reached an agreement to buy the worldwide bulk vitamin production and distribution assets of Japanese pharmaceutical maker Takeda and to form a 66% BASF-owned vitamins distribution venture in Japan.
The deal combines the $459 million bulk vitamins business of number-two worldwide producer BASF with number-three Takeda's $220 million business. Roche leads the $2.3 billion industry, with just over $1 billion in 1999 vitamin sales.
The transaction will boost BASF's share of the bulk vitamin market from 20 to 30% at a cost somewhat below Osaka-based Takeda's annual vitamin sales, industry sources say. A BASF spokesman would only say that the transaction was part of a company plan to invest $550 million to improve profits and strengthen BASFs competitive stance in the world vitamins business, now growing at 4% a year.
Some industry observers wonder if the BASF-Takeda agreement will raise eyebrows at regulatory agencies. Last year, BASF and Takeda agreed to pay
fines of $225 million and $72 million, respectively, to the U.S. for participating in a worldwide cartel to fix vitamin prices. The conspiracy included others such as Lonza, Merck KgA, and Degussa. Roche paid the biggest fine of all— $500 million. Former cartel members also face a European Union investigation, and many have paid multi-million-dollar settlements to vitamin buyers and face additional suits in civil cases.
However, a BASF spokesman says
BASF gets a boost from Takeda's vitamins
BASF Oil soluble: A, E Water soluble: B-l, B-2, nicotinamide, B-5, B-6, B-12, biotin, C Total 1999 sales: $459 million
Takeda Water soluble: B-l, B-2, B-6, folic acid, C Total 1999 sales: $220 million
Source: Company data
there is no link between the price-fixing scandal and the consolidation BASF would achieve when the expected deal with Takeda takes effect in early 2001, pending regulatory approvals. Both the BASF and Takeda boards of directors have approved the transaction. Christian Dudeck, president of BASFs fine chemicals division, says, "We will leverage the synergies arising from the combination of Takeda's competency in the water-soluble vitamins business and our strengths in the fat-soluble vitamins business" to garner a greater share of the market for BASF.
Hiroshi Uchiyama, president of Takeda's Vitamin & Food Co., says he is "confident" the combined businesses will lead to additional growth for the two parents. The BASF spokesman adds that low prices now characterize the competitive bulk vitamins market in which BASF hopes to grow through worldwide leadership in cost and technology.
While Takeda will hold the minority stake in the joint distribution operation in Japan, it will continue to produce and supply vitamins exclusively to the joint venture from its wholly owned Hikari plant in Yamaguchi, Japan. In addition to taking over Takeda's vitamin distribution businesses in the U.S., Canada, Germany, and Singapore, BASF will also take over the Takeda vitamin plant in Wilmington, N.C., with associated vitamin manufacturing technology and patents.
Marc Reisch
DuPont Settles Charges Related To Sulfuric Acid Release
DuPont has reached a $1.5 million agreement with the Justice Department and the Environmental Protection Agency to settle allegations related to a 1995 sulfiiric acid release at a Kentucky plant
The case is one of the first litigated under a section of the Clean Air Act that says companies have a general duty to maintain a safe facility, identify hazards that could lead to accidental releases, and minimize catastrophic releases. Congress added this provision, Section 112(r), to the Clean Air Act in response to the massive release in 1984 of methyl isocyanate from a Union Carbide plant in Bhopal, India.
The Justice Department says DuPont used cast-iron pipe in a tank used to store
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