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Novel Lipid Nanoparticle Technology for Effective Non-Viral Engineering of Primary Human T Cells Towards T Cell Therapy Applications Andrew Brown*, Rebecca De Souza, Nikita Jain, Tara Fernandez, Andrea Bernardo, Raymond Sabaten, Samuel Clarke and Anitha Thomas Contact us at: Precision NanoSystems Inc, Vancouver, BC, Canada [email protected] Introduction Currently approved cell therapies employ viral gene transfer which has significant manufacturing challenges and safety concerns Non-viral gene delivery methods, such as electroporation, also suffer from issues of scalable manufacturing, and can result in significant cellular toxicity PNI’s novel lipid nanoparticle (LNP) technology enables nucleic acid LNPs to be rapidly manufactured at any scale and provides high performance in sensitive and difficult to transfect cells Objectives Demonstrate the manufacturing and performance advantages of PNI’s LNP reagent for messenger RNA (mRNA) delivery to human primary T cells Showcase the therapeutic utility of PNI’s LNP reagent through expression of a chimeric antigen receptor (CAR) construct in human primary T cells Methods Gene Delivery via Lipid Nanoparticles www.precisionnanosystems.com [email protected] @PrecisionNano Results Conclusions mRNA LNPs were reproducibly manufactured in less than 5 minutes using the NanoAssemblr Spark mRNA delivery to T cells using PNI’s LNP reagent resulted in protein expression in up to 90% of cells with minimal impact on toxicity and normal proliferation Robust performance was observed across a wide range of cell processing and culture conditions Delivery and expression of a mRNA CAR construct demonstrates the utility PNI’s novel LNP technology for enabling the development of next generation immunotherapies 1. Robust Transfection While Preserving Viability in Primary Human T Cells Further Details Human T cells were isolated using pan T-cell markers and treated with LNPs containing CleanCap eGFP mRNA (Trilink). After 48 hours, T cells were stained with viability stain, FVS 570 (BD), and analyzed by flow cytometry. Cells were gated for only live cells and GFP fluorescence was quantified (A). Histograms are representative replicates from duplicate samples. Live cells were quantified and expressed as a percentage of the population (B). A. Titratable transgene expression for 14 days following mRNA LNP delivery. 48 H 96 H 7 days 14 Days 0 20 40 60 80 100 Viability (% Live Cells) B. Greater than 90% viability was observed for all treatment conditions. LNPs encapsulate nucleic acids and delivers them into the cytoplasm of cells using natural endocytic pathways The features of PNI’s novel LNP technology include: High transfection efficiencies Minimal impact on cell physiology and viability Nucleic acids are protected from degradation to maintain potency Simple 1-step administration to cells amenable to culture workflows Scalable Manufacturing using NxGen Microfluidic Technology Fast, simple and scalable LNP manufacturing using the NanoAssemblr® platform LNPs are rapidly optimized for new cell types, payloads and culture conditions using the NanoAssemblr Spark in vitro screening workflow 5. Transfection is Amenable to Various T Cell Activation Methods High expression of GFP observed in T cells activated with either CD3/CD28 (Duo Activated) or CD3/CD28/CD2 (Triple Activated) reagents. Further Details Human T cells were isolated using pan T-cell markers and activated using human CD3/CD28 or CD3/CD28/CD2 activator reagents (Stemcell). T cells treated with mRNA LNPs were stained with a viability stain, FVS 570 (BD) and analyzed by flow cytometry. Cells were gated for only live T cells and GFP fluorescence was quantified. Histograms are representative replicates from duplicate samples. 6. Similar Performance in Both Fresh and Cryopreserved T Cells High expression of GFP+ cells observed in both fresh and previously-frozen cells. Further Details Human pan T cells were isolated from whole blood and were either treated directly with mRNA LNPs or cryopreserved (Cryostor, Stemcell) and then subsequently treated. Flow cytometry analysis was performed by staining cells with a viability stain, FVS 570 (BD). Cells were gated for only live T cells and GFP fluorescence was quantified. 7. Therapeutic Utility Demonstrated by Delivery of a CD19 CAR Construct to Primary Human T Cells A. T cells treated with mRNA LNP carrying CD19 CAR mRNA indicate successful delivery and expression of the CAR construct. B. Viability was unaffected by CAR delivery with mRNA LNPs, an important consideration for a high yield of engineered T cells. Further Details CD19 CAR plasmid was purchased from Creative Biolabs and transcribed into mRNA by Trilink. Human T cells were isolated using pan T-cell markers and treated with mRNA LNPs. Flow cytometry analysis was performed by staining T cells with FVS 570 (BD) for viability, and CD19 CAR was detected using CD19 CAR detection biotin reagent (Miltenyi). Cells were gated for only live cells and fluorescence of anti-biotin-PE was quantified (A). Live cells were quantified and expressed as a percentage of the population (B). 24 48 0 20 40 60 80 %CAR+ Live Pan T Cells 24 H 48 H 0 100 200 300 400 CAR MFI /company/precision-nanosystems-inc 4. Equivalent Transgene Expression in Both Positive and Negative T Cell Selection Protocols Similar GFP expression in T cell populations isolated by either positive or negative immunomagnetic selection from the same single donor. Further Details Human T cells were isolated using either immunomagnetic positive (CD3+) or negative selection kits (Stemcell) and treated with LNPs containing CleanCap eGFP mRNA (Trilink). After 48 hours, T cells were stained with viability stain, FVS 570 (BD),and analyzed by flow cytometry. Cells were gated for only live cells and GFP fluorescence was quantified. Histograms are representative replicates from duplicate samples. Live cells were quantified and expressed as a percentage of the population. 3. T Cell Proliferation Is Not Affected Following Transfection A. High GFP Expression Levels Maintained after 96h B. Proliferation Analysis Shows Cell Division Is The Same Between Treated and Untreated Controls Further Details Human T cells were treated with proliferation dye followed by mRNA LNPs, and viability dye and analyzed by flow cytometry. Proliferation analysis was conducted using the proliferation module in FlowJo software. Data points represent the average of two replicates, and error bars represent standard deviation. 2. Versatile Transgene Expression in Multiple T Cell Subpopulations mRNA LNPs Perform Consistently Across All T Cell Subtypes Further Details Human T cells were isolated using pan T-cell markers or CD4 or CD8, then treated with LNPs containing CleanCap eGFP mRNA (Trilink). After 48 hours, T cells were stained with a viability stain, FVS 570 (BD) and analyzed by flow cytometry. Populations were gated for live T cells only or CD4+ or CD8+ and GFP fluorescence was quantified. Histograms are representative replicates from duplicate samples. eGFP mRNA LNP

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Novel Lipid Nanoparticle Technology for Effective Non-Viral Engineering of Primary Human T Cells Towards T Cell Therapy ApplicationsAndrew Brown*, Rebecca De Souza, Nikita Jain, Tara Fernandez, Andrea Bernardo, Raymond Sabaten, Samuel Clarke and Anitha Thomas Contact us at:

Precision NanoSystems Inc, Vancouver, BC, [email protected]

Introduction▪ Currently approved cell therapies employ viral gene transfer

which has significant manufacturing challenges and safety concerns

▪ Non-viral gene delivery methods, such as electroporation, also suffer from issues of scalable manufacturing, and can result in significant cellular toxicity

▪ PNI’s novel lipid nanoparticle (LNP) technology enables nucleic acid LNPs to be rapidly manufactured at any scale and provides high performance in sensitive and difficult to transfect cells

Objectives▪ Demonstrate the manufacturing and performance advantages of

PNI’s LNP reagent for messenger RNA (mRNA) delivery to humanprimary T cells

▪ Showcase the therapeutic utility of PNI’s LNP reagent throughexpression of a chimeric antigen receptor (CAR) construct inhuman primary T cells

MethodsGene Delivery via Lipid Nanoparticles

www.precisionnanosystems.com [email protected] @PrecisionNano

Results

Conclusions▪ mRNA LNPs were reproducibly manufactured in less than 5

minutes using the NanoAssemblr Spark

▪ mRNA delivery to T cells using PNI’s LNP reagent resulted inprotein expression in up to 90% of cells with minimal impacton toxicity and normal proliferation

▪ Robust performance was observed across a wide range of cellprocessing and culture conditions

▪ Delivery and expression of a mRNA CAR constructdemonstrates the utility PNI’s novel LNP technology forenabling the development of next generationimmunotherapies

1. Robust Transfection While Preserving Viability in Primary Human T Cells

Further DetailsHuman T cells were isolated using pan T-cell markers and treated with LNPs containing CleanCap eGFP mRNA (Trilink). After 48 hours, T cells were stained with viability stain, FVS 570 (BD), and analyzed by flow cytometry. Cells were gated for only live cells and GFP fluorescence was quantified (A). Histograms are representative replicates from duplicate samples. Live cells were quantified and expressed as a percentage of the population (B).

A. Titratable transgene expression for 14 days following mRNA LNP delivery.

48 H 96 H 7 days 14 Days

0

20

40

60

80

100

Via

bili

ty (

% L

ive C

ells

)

Untreated

62.5 ng / 500 K Cells

125 ng / 500 K Cells

250 ng / 500 K Cells

500 ng / 500 K Cells

B. Greater than 90% viability was observed for all treatment conditions.

▪ LNPs encapsulate nucleic acids and delivers them into the cytoplasm of cells using natural endocytic pathways

▪ The features of PNI’s novel LNP technology include:

▪ High transfection efficiencies

▪ Minimal impact on cell physiology and viability

▪ Nucleic acids are protected from degradation to maintain potency

▪ Simple 1-step administration to cells amenable to culture workflows

Scalable Manufacturing using NxGen Microfluidic Technology

• Fast, simple and scalable LNP manufacturing using the NanoAssemblr® platform

• LNPs are rapidly optimized for new cell types, payloads and culture conditions using the NanoAssemblr Spark in vitro screening workflow

5. Transfection is Amenable to Various T Cell Activation Methods High expression of GFP observed in T cells activated with either CD3/CD28 (Duo Activated) or CD3/CD28/CD2 (Triple Activated) reagents.

Further DetailsHuman T cells were isolated using pan T-cell markers and activated using human CD3/CD28 or CD3/CD28/CD2 activator reagents (Stemcell). T cells treated with mRNA LNPs were stained with a viability stain, FVS 570 (BD) and analyzed by flow cytometry. Cells were gated for only live T cells and GFP fluorescence was quantified. Histograms are representative replicates from duplicate samples.

6. Similar Performance in Both Fresh and Cryopreserved T Cells

High expression of GFP+ cells observed in both fresh and previously-frozen cells.

Further DetailsHuman pan T cells were isolated from whole blood and were either treated directly with mRNA LNPs or cryopreserved (Cryostor, Stemcell) and then subsequently treated. Flow cytometry analysis was performed by staining cells with a viability stain, FVS 570 (BD). Cells were gated for only live T cells and GFP fluorescence was quantified.

7. Therapeutic Utility Demonstrated by Delivery of a CD19 CAR Construct to Primary Human T Cells

A. T cells treated with mRNA LNP carrying CD19 CAR mRNA indicate successful delivery and expression of the CAR construct.

B. Viability was unaffected by CAR delivery with mRNA LNPs, an important consideration for a high yield of engineered T cells.

Further DetailsCD19 CAR plasmid was purchased from Creative Biolabs and transcribed into mRNA by Trilink. Human T cells were isolated using pan T-cell markers and treated with mRNA LNPs. Flow cytometry analysis was performed by staining T cells with FVS 570 (BD) for viability, and CD19 CAR was detected using CD19 CAR detection biotin reagent (Miltenyi). Cells were gated for only live cells and fluorescence of anti-biotin-PE was quantified (A). Live cells were quantified and expressed as a percentage of the population (B).

24 48

0

20

40

60

80

%CAR

+ L

ive P

an T

Cells

24 H 48 H

0

100

200

300

400

CAR M

FI

24 48

0

20

40

60

80

%CAR

+ L

ive P

an T

Cells

24 H 48 H

0

100

200

300

400

CAR M

FI

/company/precision-nanosystems-inc

4. Equivalent Transgene Expression in Both Positive and Negative T Cell Selection ProtocolsSimilar GFP expression in T cell populations isolated by either positive or negative immunomagnetic selection from the same single donor.

Further DetailsHuman T cells were isolated using either immunomagnetic positive (CD3+) or negative selection kits (Stemcell) and treated with LNPs containing CleanCap eGFP mRNA (Trilink). After 48 hours, T cells were stained with viability stain, FVS 570 (BD),and analyzed by flow cytometry. Cells were gated for only live cells and GFP fluorescence was quantified. Histograms are representative replicates from duplicate samples. Live cells were quantified and expressed as a percentage of the population.

3. T Cell Proliferation Is Not Affected Following Transfection

A. High GFP Expression Levels Maintained after 96h

B. Proliferation Analysis Shows Cell Division Is The Same Between Treated and Untreated Controls

Further DetailsHuman T cells were treated with proliferation dye followed by mRNA LNPs, and viability dye and analyzed by flow cytometry. Proliferation analysis was conducted using the proliferation module in FlowJo software. Data points represent the average of two replicates, and error bars represent standard deviation.

2. Versatile Transgene Expression in Multiple T Cell SubpopulationsmRNA LNPs Perform Consistently Across All T Cell Subtypes

Further DetailsHuman T cells were isolated using pan T-cell markers or CD4 or CD8, then treated with LNPs containing CleanCap eGFP mRNA (Trilink). After 48 hours, T cells were stained with a viability stain, FVS 570 (BD) and analyzed by flow cytometry. Populations were gated for live T cells only or CD4+ or CD8+ and GFP fluorescence was quantified. Histograms are representative replicates from duplicate samples.

eGFP mRNA LNP