2
© Nature Publishing Group 1966 646 NATURE VOl. . 212 NOVEMBER 5. 1966 31·3 per cent iron as free iron oxide:s (dithionite-soluble) after the coarse inorganic and organic particles had been removed by sieving. According to X-ray analysis and measurement of solubility in acidic ammonium oxalate (which gives a fairly good measure of amorphous iron oxides 2 ) no crystalline oxides were present (sample I). This material was aged under conditions extremely favourable for goethite formation-that is, boiling for some hours in strong alkaline solution (normal potassium hydroxide). Under these conditions, artificially prepared ferric hydroxide is readily transformed to well crystallized goethite in a few hours 3 The natural mat erial, however, did not crystallize (sample 3, Table 1}, e ven after pro- longed ageing (72 h). It was decided to treat it several times with 15 per cent hydrogen peroxide in order to destroy the organic matter; while the carbon conte nt was reduced from 10·23 to 1·03 per cent carbon, tho amorphous nature was unchanged (sample 2). After t his materi al had been aged under tho alkaline conditions a lready descFibe d, X-ray analysis showed broadened diffraction lines of goethite (sample 4). In order to confirm this result, amorphous ferric hydroxide, which hart been freshly prepared by pre cipita- tion of ferric nitrat .e with ammonia, was aged in the sa me way, except that on this occasion the hot normal pot as- sium hydroxide extra ct of the natural material was usetl. This clear dark coloured extract contained 1·24 g of carbonjl. When the pre cipitate was treated with pure potassium hydroxid e, go ethite was formed in a few hours and this was accompani ed by a considerable decrease in solubility (sample 7); however, when the potassium hydroxide extract of th e natural mate rial was u sed, no crystalline forms appearE>d and th e solubility remained high (samplP 8). Table 1 Sumple :-<o. Sample Treatment Ditch preeipi- None tate 2 Same as 1 H,O, 3 Same as 1 4 h ageing in N KOH at 100° C 4 Same as 2 4 h ageing in N KOJI at 100° C 5 Same as 2 72 h ageing in N KOII at 100° C 6 Freshly preci- None pitated fer- ric hydroxide Same as 6 4 h ageing in N KOH at 100° C 8 Same as 6 4 h ageing in boiling N KOH extract of No. 1 at 100° C Analytical da ta "Amorphous oxide" (per- X-ray centage of diffraction total) 100·2 Amorphous 96·3 Amorphous 99·0 Amorphous 61·7 Goe thite (weak) 52·3 Goethite ('weak) 100·0 Amorphous 6-1 Goethite (strong) 81·3 Amorphous + goethit e (ver)' weak) These results suggest that organic compounds in th e alkaline extract may have an inhibitory effect on th e crystallization of amorphous ferric hydroxide. Strong ads orption of organic anions by the amorphous ferri c hydroxide may disturb or e ven prevent its rapid cryst .a l- lization. Adsorption of anions such as phosphate, molybdate or which are usually prese nt in soils and se diment s, by ferric hydroxide, may have the same effoct. This has, in fact, b een verified for both phosphates•·• and silicates•; thus it is possible that the se anions played a part in the present experiments. In the presence of organic matt er, both natur al and synthetic goethite, and amorphous ferric hydroxide, ar0 not directly dehydra ted to haematito on heating, but are first dehydrated to magh aemit e'. The involve ment of org anic matt er in these reactions may also explain why t- he sharp exothermi c peak usually observed for artificial amo rphous ferric hydroxide on dry the rmal a nalysis does not occur with amorphous hydr oxides in soils. Further more, the hardening of laterite, which is frequently obse rv ed aft er the vegetative cover has been removed , may also arise from a similar effect bflcause t.he soil organic matter would be de composed on cultivati on. Further experiments arfl being carried out. Institut fiir Bodenkunde, Teehnische Universitat, Berlin. U. SCHWERTMANN 'Schwertma nn, U., Z. Pjlanzenem . lJgq. Bodenkde, 108, 37 ( 1065 ). 'Schwertmann, U., Z. Pjlanzenern. Dgg_ Bodenkde. , 105, 194 (]OM). ' Glemser, 0., Ber. Dtsch. Chem. Ges., 70, 2117 (193i) . • Scheffer, F ., et al., Chem. d. Erde,19, 51 (I 957). ' Krause, A., and Borkowska, A., f. Chern., 94, 460 (1 963). 'Schellmann, W., Chern. d. Erde, 20, 104 (1959). 'Sr. hwert. mann , U., N. Jb . Min. Mh., 174 (19f>9 ). A Microbiological Approach to the Problem of Soil Humic Acid Structures CHEMICAL investigations of soil humic acids have indicated t_he ir possibl e component s, but have not so far thrown any li g ht on the structures involved in this complex group of compounds'. The u sc of biodegrad a tion of humi c ac ids as a m eans of analysing their constitue nt s has a ttract ,ed the att ention of only a few work ors 2 - 4 Most studi c f< coucerned with th e microbial utiliza tion and de gr a dat .ion of humic acids hav e revealed the susceptibility of the ir nitrogenous portion to attack; however, the of these moi eties are defined larg nly by th e fraction. The use of humic a cids as th o sole :>o urc e uf carbon during growth by mi cro-organisms has rece ntly been re port ed 5 Because enzymes arc specific and t.heir r eaction conditions mild, the init ial pi"Oduct s of mi crobi o>.l enzyme cleavage should be more indicative of the con- st ituents and struc tures of humic acids th an i:-,; possible with ch emical degr ada tions, wh ore ar te fa cts can eas ily be produce d. There are, ho wever, some pi tfalls in using a microbi o logical system which must be avoidnd . Tlw by-products of microbi al metabo lism mu:>t not be mi s- ta ken for humic acid derivatives. Unchar a cteri s t.ic por- t. ions of soil humus should not be use d. Organisms whi ch merely trans form withou t degr a dation may provid e littl (' useful information. A number of orga nisms, in se quoneo or together, may be re quired to achiev e a comple t f• bre akdown of humi c acids. Carbon dating techniqu es hav e indicated that th e m ean residence time of the carbon of "mobile" humi c acid s from a Black Chernoze mie (Melf o rt) soil is ab out 800 years, thus indicating that the gre atest prop o rtion of this carb oH has a ve ry low turnover rate• . Cer tain fraction s of th e humic acids, such as the acid hydrolysable portion, how - ove r, we re found to have a much higher turnover ratt' , indicating that micro-orga nisms in tho soil are capable of attacking at least a portion of the humic acids'. Micro -organisms capabl e of utilizing purified "mobil e" humic acids from the Melfort Orthic Black soil as a source of carbon andfor nitrogen were isolate d. Representatives of the genera Penicillium, Aspergillus, Arthrobacter and Pseudomonas were found to grow well with humic acids as a sole source of carbon. A Penicillium isolate was sele cted for furth er investigation . This fungus did not produce any pigment within a pe riod of 8-9 weeks; it did not possess laccase, peroxidas e, tyrosinase, proteinase , amylase or cellulase ; it grew well on Czapcck-Dox sucrose broth and utilized humi c acid s as a sole source of ca rbon . R spiration meas ureme nts indicated th at the fungus utilized an inducible enzyme system, which re quir ed about 5 h for induction. It grow wcll at concentrations of 0·2 per cent humic acids or lowor a nd, once a dapt ed, continued to utilize humi c acid carbon in t.ho pre sence of glu cose. Replacement cultures, s hak en for 7 weeks, used up to 35 per cent of tho humic acirts (Tabl e 1). The extent of attack on the humic acids depended on the mol ecular size of these materi a ls. The frac tions having molecular weights of more than 50,000 wore attacked to a

NATURE A Microbiological Approach to the Problem of … · measurement of solubility in acidic ammonium oxalate ... amorphous ferric hydroxide on dry thermal analysis does ... A Microbiological

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© Nature Publishing Group1966

646 NATURE VOl. . 212 NOVEMBER 5. 1966

31·3 per cent iron as free iron oxide:s (dithionite-soluble) after the coarse inorganic and organic particles had been removed by sieving. According to X-ray analysis and measurement of solubility in acidic ammonium oxalate (which gives a fairly good measure of amorphous iron oxides2

) no crystalline oxides were present (sample I). This material was aged under conditions extremely favourable for goethite formation-that is, boiling for some hours in strong alkaline solution (normal potassium hydroxide). Under these conditions, artificially prepared ferric hydroxide is r eadily transformed to well crystallized goethite in a few hours3 • The natural material, however, did not crystallize (sample 3, Table 1}, even after pro­longed ageing (72 h). It was decided to treat it several times with 15 per cent hydrogen peroxide in order to destroy the organic matter; while the carbon content was reduced from 10·23 to 1·03 per cent carbon, tho amorphous nature was unchanged (sample 2). After t his materi a l had been aged under tho alkaline conditions a lready descFibed, X-ray analysis showed broadened diffraction lines of goethite (sample 4).

In order to confirm this result, amorphous ferric hydroxide, which hart been freshly prepared by precipita ­tion of ferric nitrat.e with ammonia, was aged in the sa me way, except that on this occasion the hot normal potas­sium hydroxide extract of the natural material was usetl. This clear dark coloured extract contained 1·24 g of carbonjl. When the precipitate was treated with pure potassium hydroxide, goethite was formed in a few hours and this was accompanied by a considerable decrease in solubility (sample 7); however, when the potassium hydroxide extract of the natura l material was used, no crystalline forms appearE>d and the solubility remained high (samplP 8).

Table 1

Sumple :-<o. Sample Treatment

Ditch preeipi- None tate

2 Same as 1 H,O, 3 Same as 1 4 h ageing in N KOH

at 100° C 4 Same as 2 4 h ageing in N KOJI

at 100° C 5 Same as 2 72 h ageing in N KOII

at 100° C 6 Freshly preci- None

pitated fer-ric hydroxide

Same as 6 4 h ageing in N KOH at 100° C

8 Same as 6 4 h ageing in boiling N KOH extract of No. 1 at 100° C

Analytical da ta "Amorphous oxide" (per- X-ra y

cen tage of diffraction total)

100·2 Amorphous

96·3 Amorphous 99·0 Amorphous

61 ·7 Goethite (weak)

52·3 Goethite ('weak)

100·0 Amorphous

6-1 Goethite (strong)

81·3 Amorphous + goethite (ver)' weak)

These results suggest that organic compounds in the alkaline extract may have an inhibitory effect on the crystallization of amorphous ferric hydroxide. Strong adsorption of organic anions by the amorphous ferri c hydroxide may disturb or even prevent its rapid cryst.a l­lization.

Adsorption of anions such as phosphate, molybdate or ~ilicat.e , which are usually present in soils and sediments, by ferric hydroxide, may have the same effoct. This has, in fact, been verified for both phosphates•·• and silicates•; thus it is possible that these anions played a part in the present experiments.

In the presence of organic matter, both natural and synthetic goethite, and amorphous ferric hydroxide, ar0 not directly d ehydra ted to haematito on heating, but are first dehydrated to maghaemite ' . The involvement of organic matter in these reactions may also explain why t-he sharp exothermic peak usually observed for artificial amorphous ferric hydroxide on dry thermal a nalysis does not occur with amorphous hydroxides in soils. Further more, the hardening of laterite, which is frequently observed after the vegetative cover has been removed, may also arise from a similar effect bflcause t.he soil

organic matter would be d ecomposed on cultivation. Further experiments arfl being carried out.

Institut fiir Bodenkunde, Teehnische Universitat, Berlin.

U. SCHWERTMANN

' Schwertma nn, U., Z. Pjlanzenem . lJgq. Bodenkde, 108, 37 ( 1065). 'Schwertmann, U., Z. Pjlanzenern. Dgg_ Bodenkde. , 105, 194 (]OM). ' Glemser, 0., Ber. Dtsch. Chem. Ges., 70, 2117 (193i) . • Scheffer, F ., et al., Chem . d. Erde,19, 51 (I 957). ' Krause, A., and Borkowska, A., -~lh. f . Chern., 94, 460 (1 963). ' Schellmann, W., Chern. d. Erde, 20, 104 (1959). 'Sr.hwert.mann , U., N. Jb. Min. Mh., 174 (19f>9 ).

A Microbiological Approach to the Problem of Soil Humic Acid Structures

CHEMICAL investigations of soil humic acids have indicated t_heir possible components , but ha ve not so far thrown any light on the structures involved in this complex group of compounds'. The usc of biodegradation of humic a cids as a m eans of analysing their constituents has a ttract,ed the attention of only a few workors 2 - 4 • Most studicf< coucerned with the microbial utiliza tion and degradat.ion of humic acids have revealed the susceptibility of their nitrogenous portion to attack; however, the st, ruct.urt'~ of these moieties are defined largnly by the carbonal'cou~ fraction.

The exteu~ive use of humic a cids as tho sole :>o urce uf carbon during growth by micro-organism s has recently been reported 5

• B ecause enzymes arc specific and t.heir reaction conditions mild, the ini t ial pi"Oduct s of microbi o>.l enzyme cleavage should be m ore indicative of t he con­st ituents and structures of humic acids than i:-,; possible with chemical degrada tions, whore artefacts can eas ily be produced. There a re , however, some pi t fa lls in using a microbiological system which must be avoidnd . Tlw by-products of microbia l m eta bolism mu:>t not be mis ­taken for humic acid d erivatives. Uncharacteris t.ic por­t.ions of soil humus should not be used. Organisms which merely transform without degradation may provide littl(' useful information. A number of organisms, in sequoneo or together, may be required to a chieve a complet f• breakdown of humic acid s.

Carbon dating t echniques have indicated that the m ean residence time of the carbon of "mobile" humic acids from a Black Chernozemie (Melfort) soil is about 800 years , thus indicating that the greatest proportion of this carboH has a very low turnover rate•. Cer tain fractions of the humic acids, such as the acid hydrolysable portion, how ­over, were found to have a much higher turnover ratt' , indicating that micro-organisms in tho soil are capable of attacking at least a portion of the humic acids'.

Micro-organisms capable of utilizing purified "mobile" humic acids from the Melfort Orthic Black soil as a source of carbon andfor nitrogen were isolated. Representatives of the genera Penicillium, Aspergillus, Arthrobacter and Pseudomonas were found to grow well with humic acids as a sole source of carbon. A Penicillium isolate was selected for further investigation. This fungus did not produce any pigment within a period of 8-9 weeks; it did not possess laccase , peroxidase, tyrosinase , proteinase , amylase or cellulase ; it gre w well on Czapcck-Dox sucrose broth and utilized humic acids as a sole source of carbon.

R spiration measurements indicated that the fungus utilized an inducible enzyme system, which required about 5 h for induction. I t grow wcll at concentrations of 0·2 per cent humic acids or lowor a nd, once adapted, continued to utilize humic acid carbon in t.ho presence of glucose. Replacement cultures, shaken for 7 weeks, used up to 35 per cent of tho humic acirts (Table 1).

The extent of attack on the humic acids depended on the molecular size of these materia ls. The fractions having molecular weights of more than 50,000 wore attacked to a

© Nature Publishing Group1966

NO. 5062 NoVEMBER 5. 1 966 NATURE 647

Table 1. UTILIZATION OF HUMIC ACIDS BY ISOLATE Humic

acid added (mg)

THE Penicillium Humic acid recovered Amount

used (per cent)

after 7 weeks (mg)

Control Humate as carbon source at 0·020

per cent Humate as nitrogen source at 0·020

per cent Humate as a source of both carbon

and nitrogen at 0·020 per cent

60·0 60·0

60·0

60·0

60·0 40·8 32·0·

42·0 30·0

39·0 35·0

<:c~tsgurfz~?i~~~lation and incubation for a similar period resulted in 6 per

!?I'Oa~<lr extent than those below 50,000 ('Sephadex' gel fractwnatio~8 ). Blemental analyses of tho surviving humat~s IndiCated tha_t they were richer in nitrogon than tho _origmal. . FunctiOnal group analyses indicated a considera:ble mcrease in the hydroxyl content, during degradation, with a smaller increase in the phenolic hydroxyl and tho carboxyl groups available for titration. . Paper . and gas chromatography used to study tho mtcrmed1ates pr'?duced by fungal cleavage, under con­ditiOns of rcs~rwted aeration, indicated that salicyl alcohol and salicylaldehyde were formed. Salicyl alcohol (also known as saligenin) is the aglycone of salicin- a ~lycosido found in plants belonging to the family of :Salwaceae and a few others•. Willow and poplar, which arc bot~ members of the Salicacoae, formed an important portwn of the flora covering this soil boforo the land was cleared for cultivation around 1900 (ref. 10).

It is interesting that one of the first known isolations of intermediates forme~ during the microbial cleavage of humiC amds should y10ld two compounds which could not have been obtained by means of normal chemical degrada­tiOn techniques. This implicates a plant glycoside in the synthesis of humic materials. Salicyl alcohol may also be pr·oducod by tho reduction of salicylic acid, through salicylaldehyde, by several fungi which inhabit soil". Sa,licylaldehyde has been implicated in the degradation of poly~~m_nat,ic compounds such as naphthalene". The Pemctlhum used in this investigation, however, did not reduce sa,licylic acid in either aerated cultures or low oxygen tension cultures, and this was so whether or not sucrose was present; moreover, it did not appear to utilize naphthalone.

Salicyl alcohol is known to undergo condensation to produce resin-like substances, and has a great affinity for amino compounds; it could therefore be involved in soil humus formation.

Department of Soil Science, University of Saskatchewan, Saskatoon.

s. P. MATHUR

E. A. PAUL

1 Dubach, P., and Mehta, N.C., Soils and Fert., 26, 293 (1963). 'Burges, A., and Latter, P., Nature,l86, 404 (1960). ' Hurst, H. M., Plant Phenolics Group Symp., Liverpool. Enzyme Chemistry

of Phenolic Compounds, edit. by Pridham, J. B., 121 (1963). • .fohnston, H. H., Proc. A mer. Soil Sci. Soc.,25, 32 (1961). 'Latter, P., and Burges, A., Seventh Intern. Gong. Soil Sci. Madison 2 643

(1961). • • 'Paul, E. A., Campbell, C. A., R.P-nnie, D. A., and McCallum, K. .r., Eighth

Intern. Gong, Soil Sci., Bucharest, 2 (1964). 'Campbell, C. A., thesis, University of Sask. (1965). 'Mehta, N. C., Dubach, P., and Deuel, H. !il., Pfi. Erniihr. Dung. 102 128

(1963). • •

• Paris. R., in Chemical Plant Taxonomy, edit. by Swain, T., 343 (Academic Pres.-, New York, 1963),

"Soil Survey Report No. 7, Dept. Soils, University of Sask. (1928). "Davies, J. I., &nd Evans, W. C., liiochem. J., 85, 21 (1962).

Age of the Youngest Hydrated Halloysite of Kyushu

Aomine and Miyauchi have concluded that the hydrated halloysite of a buried soil at Choyo in tho Aso district of Kyushu was derived from volcanic ash that fell between 8,000 and 9,000 years ago'. The reasoning by which they itrdved at this conclusion is open to question, and both

Table 1. (AFTER AomNE AND MlYAUCHI)

Organic In elay fraction

Location Horizon Depth Hydrated

carbon Allophane halloysite (em) (per cent) (per cent) (per cent)

Choyo 1 0-30 8·2 67 0 2 30-80 2·4 75 u 3 80-90 1·2 73 0 4 90-140 1·7 68 u 5 140-190 11·0 37 33

Kanoya 1 0-30 5·6 70 0 2 30-70 12·1 72 u 3 70-130 1·8 80 u 4 130-175 7·1 74 0 5 175-225 2·5 75 0 6 225- 275 4·0 so 35

the ash and the halloysite could be much older than 9,000 years.

They_ stated: "A buried surface soil containing hydrated ha:IIoysite would offer a suitable sample for dating the• rmneral by means of radiocarbon measurements, if the soil contams enough organic carbon and has been isolated f:rom biotic activity since tho soil was covered with ash .... So tho age of volcanic ash in a previous surface layor can bP estimated by_ the content of cai·bon-14 in the organic matter, provided that the period of time of carbon aecumulation is negligibly short as compared with the ash-age."

They then gave details of a profile at Choyo ( 32° 53' N., 131 o 0'. E.) in which the upper four layers contained predo~mantly allophane in the clay fnwtion but no hitlloysite, and the fifth contained about equal amounts of a!Jophanc and hydrated halloysite (Table I). This fifth larer was ri?h !n organic matter and to arrive at the agc• of the_ ash of th1s layer they took the radiocarbon age of it,; orgamc carbon (8,650 ± 200 yr): "This value undoubtedly roprosents an average of organic carbon accumulated in the layer while it was on the surface". To this value they added an estimate of 330 yr ("or less") for the 11 per cent of carbon to accumulate, and concluded that "the hydrated halloys1te of the fifth layer was dorivod from tho ash that fell between 8,000 and 9,000 years ago .... "

yYhilc this is a P<:>Ssible interpretation, tho following objectiOns can be raised: ( l) It implies that the ash of tho fifth layer is only a few hundred years older than that of the fourth layer. It is improbable that a difference of a few hundred years in eight or nino thousand years would be suffiCient to produce the sharp contrast in tho clay mineralogy of the two layers. (2) In another profile, at Kanoya (31 ° 24' N., 130° 52' E.), Aomine and Miyauchi found_ ~hat tho organic ma~ter of the uppermost layer contammg hydrated halloysite, the sixth layer (Table 1 ), was beyond radiocarbon measurement, "that is, older than 30,000 years". In none of the layers above this buried soil however, is there any halloysitc, although one or more of them is probably much older than 9,000 yr. (3) The age of the orgaaic matter of a surface soil layer can be much young"r than the time taken for the soil to form.

When soils form on newly deposited parent materials there is an initial period during which organic carbon rapidly accumulates, but there comes a time when a state of dynamic equilibrium is reached after which net accumulation ceases, or becomes very much slower, perhaps accompanying changPs in the constitution of the clay minerals or changes in inttrnal drainage. The level of this equilibrium differs according to climate and in somo cases according to parent material, and usually this oquilibr_ium will be reached in a few hundred yoars. Thereafter, although the concentrations of organic matter stay fairly constant, thoro is a continual breakdown of much of tho existing organic matter and build-up of fresh organic matter2

•3

• Some very stable humus compounds are formed that do not enter into this process, but so far as I am aware their proportion has never been very groat. Tamm collected humus from the B horizons of throo podzol profiles on morames at Garponborg, Hartejarnsheden and HaboskPgen in Sweden, at sites that had bec'n forestod for as much as 9,000 yr, and, in commenting on the radio-