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The human gut is home to trillions of commensal microorganisms, and we are beginning to understand how these microorganisms interact with, and influence, the host immune system. New research published in Immunity and Cell now reveals that a specific commensal species, seg- mented filamentous bacterium (SFB), has a crucial role in the maturation of the T cell response in the gut. The commensal microbiota is known to have a key role in immune system maturation and T cell homeo- stasis in the gut, but a role for a spe- cific member of the microbiota had not been identified. Previous studies have shown that SFB, a species of non- culturable, Gram-positive bacteria that is closely related to Clostridium spp., stimulates the production of secretory IgA and the recruitment of intraepithelial lymphocytes to the gut. The effects of SFB colonization on the immune response in the mouse gut were studied by both Gaboriau- Routhiau et al. and Ivanov et al. Using gnotobiotic mouse models, transcriptomics and cytokine production analysis, Gaboriau-Routhiau et al. found that intestinal colonization of mice with the complete mouse faecal microbiota stimulated a broad range of T cell responses, including T helper 1 (T H 1), T H 17 and regulatory T cell responses. Analysis of gnotobiotic mouse faecal samples by fluorescence in situ hybridization revealed that a restricted number of microbial spe- cies induced these T cell responses and that, specifically, SFB was one such species. Finally, the authors showed that SFB adheres to the luminal surface of Peyer’s patches and stimulates the Peyer’s patch T cell response, which reinforces previous work showing that T cell responses to gut micro- organisms are initiated in Peyer’s patches. In contrast to this broad effect on T cells, the results of the microarray analysis carried out by Ivanov et al. showed that SFB specifically induces the accumulation of T H 17 cells in the small intestine. Colonization of germ- free mice with SFB induced T H 17 cell differentiation, which involved the induction of the acute-phase protein serum amyloid A. Furthermore, colonization with SFB correlated with increased expression of genes that are associated with inflammation and antimicrobial defence (such as genes encoding antimicrobial peptides). Finally, SFB colonization protected the host from the intestinal pathogen Citrobacter rodentium. Although these results differ, both studies identify SFB as a commensal species with a key role in the maturation of the adaptive mucosal immune response in the gut. Further work is needed to establish the exact mechanisms involved. Interestingly, a third recent paper published in Nature Immunology suggests that enteric α-defensins are impor- tant for the growth of SFB in the gut and for regulating intestinal microbial ecology. Katrina Ray ORIGINAL RESEARCH PAPERS Gaboriau- Routhiau, V. et al. The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses. Immunity 31, 677–689 (2009) | Ivanov, I. I. et al. Induction of intestinal Th17 cells by segmented filamentous bacteria. Cell 139, 485–498 (2009) | Salzman, N. H. et al. Enteric defensins are essential regulators of intestinal microbial ecology. Nature Immunol. 22 Oct 2009 (doi:10.1038/ni.1825) MUCOSAL IMMUNOLOGY Homing in on the friendliest of bacteria RESEARCH HIGHLIGHTS NATURE REVIEWS | IMMUNOLOGY VOLUME 9 | DECEMBER 2009 © 2009 Macmillan Publishers Limited. All rights reserved

Mucosal immunology: Homing in on the friendliest of bacteria

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The human gut is home to trillions of commensal microorganisms, and we are beginning to understand how these microorganisms interact with, and influence, the host immune system. New research published in Immunity and Cell now reveals that a specific commensal species, seg­mented filamentous bacterium (SFB), has a crucial role in the maturation of the T cell response in the gut.

The commensal microbiota is known to have a key role in immune system maturation and T cell homeo­stasis in the gut, but a role for a spe­cific member of the microbiota had not been identified. Previous studies have shown that SFB, a species of non­culturable, Gram­positive bacteria that is closely related to Clostridium spp., stimulates the production of secretory IgA and the recruitment of intraepithelial lymphocytes to the gut. The effects of SFB colonization on the immune response in the mouse gut were studied by both Gaboriau­Routhiau et al. and Ivanov et al.

Using gnotobiotic mouse models, trans criptomics and cytokine production analysis, Gaboriau­Routhiau

et al. found that intestinal colonization of mice with the

complete mouse faecal microbiota stimulated a broad range of T cell responses, including T helper 1 (TH1), TH17 and regulatory T cell responses. Analysis of gnotobiotic mouse faecal samples by fluorescence in situ hybridization revealed that a restricted number of microbial spe­cies induced these T cell responses and that, specifically, SFB was one such species. Finally, the authors showed that SFB adheres to the luminal surface of Peyer’s patches and stimulates the Peyer’s patch T cell response, which reinforces previous work showing that T cell responses to gut micro­organisms are initiated in Peyer’s patches.

In contrast to this broad effect on T cells, the results of the microarray analysis carried out by Ivanov et al. showed that SFB specifically induces the accumulation of TH17 cells in the small intestine. Colonization of germ­free mice with SFB induced TH17 cell differentiation, which involved the induction of the acute­phase protein serum amyloid A. Furthermore, colonization with SFB correlated with

increased expression of genes that are associated with inflammation and antimicrobial defence (such as genes encoding antimicrobial peptides). Finally, SFB colonization protected the host from the intestinal pathogen Citrobacter rodentium.

Although these results differ, both studies identify SFB as a commensal

species with a key role in the maturation of the adaptive mucosal immune

response in the gut. Further work is needed to establish

the exact mechanisms involved. Interestingly, a third recent paper published in Nature Immunology suggests that enteric α­defensins are impor­tant for the growth of SFB

in the gut and for regulating intestinal microbial ecology.

Katrina Ray

ORIGINAL RESEARCH PAPERS Gaboriau-Routhiau, V. et al. The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses. Immunity 31, 677–689 (2009) | Ivanov, I. I. et al. Induction of intestinal Th17 cells by segmented filamentous bacteria. Cell 139, 485–498 (2009) | Salzman, N. H. et al. Enteric defensins are essential regulators of intestinal microbial ecology. Nature Immunol. 22 Oct 2009 (doi:10.1038/ni.1825)

M u C O S A L I M M u N O LO Gy

Homing in on the friendliest of bacteria

R e s e a R c h h i g h l i g h t s

NATURe RevIewS | Immunology volUme 9 | deCemBeR 2009

© 2009 Macmillan Publishers Limited. All rights reserved