MOLECULAR EVOLUTIONARY GENETIC STUDIES OF ORTHOPTEROID INSECTS: A BIBLIOGRAPHY.

Since my last review of this topic (Chapco 1997), there has been a virtual explosion in the number of population genetics studies and phylogenetic analyses of grasshoppers, katydids and their kin in which molecular markers (e.g. RAPDs, AFLPs, microsatellites, partial mitochondrial and nuclear sequences and, more recently, complete genomic sequences) have been used as traits. To perform an up-to-date review at this time would be a somewhat daunting task. Instead, I am providing a list of references that have appeared since 1997 and which may prove useful to other researchers. The style I’ve chosen more or less follows that set out by the Journal of Orthoptera Research. Some references, strictly speaking, are not molecular in scope but ones in which comparisons with molecular phylogenetic findings are made (e.g. Cigliano and Amédégnato 2010). Others deal with molecular aspects of development (e.g. Dearden and Akam 2000), which, it is expected, will have phylogenetic implications in the future. A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

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Allegrucci G., Trucchi E., Sbordoni V. 2011. Tempo and mode of species diversification in Dolichopoda cave crickets (Orthoptera, Rhaphidophorida). Molecular Phylogenetics and Evolution 60: 108 – 121.

Amédégnato C., Chapco W., Litzenberger G. 2003. Out of South America? Additional

evidence for a southern origin of melanopline grasshoppers. Molecular Phylogenetics and Evolution 29: 115 – 119.

Apple J. L., Grace T., Joern A., St. Amands P., Wisely S. M. 2010. Comparative genome scan detects host-related divergent selection in the grasshopper Hesperotettix viridis. Molecular Ecology 19: 4012 – 4028.

Arnedo M. A., Oromí P., Martin de Abreu S., Ribera C. 2008. Biogeographical and evolutionary patterns in the Macaronesian shield-backed katydid genus Calliphona Krauss, 1892 (Orthoptera: Tettigoniidae) and allies as inferred from phylogenetic analyses of multiple mitochondrial genes. Systematic Entomology 33: 145 – 158.

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Bailey N. W., Gwynne D. T., Ritchie M. G. 2005. Are solitary and gregarious Mormon crickets (Anabrus simplex, Orthoptera, Tettigoniidae) genetically distinct? Heredity 95: 166 – 173.

Bailey N. W., Gwynne D. T., Ritchie M. G. 2007. Dispersal differences predict

population genetic structure in Mormon crickets. Molecular Ecology 16: 2079 – 2089.

Bensasson D., Zhang D.-X., Hewitt G. M. 2000. Frequent assimilation of mitochondrial

DNA by grasshopper nuclear genomes. Molecular Biology and Evolution 17: 406 – 415.

Bensasson D., Petrov D. A., Zhang D. X., Hartl D. L., Hewitt G. M. 2001. Genomic gigantism: DNA loss is slow in mountain grasshoppers. Molecular Biology and Evolution 18: 246 – 253.

Bensasson D., Zhang D.-X., Hartl D. L., Hewitt G. M. 2001. Mitochondrial pseudogenes: Evolution’s misplaced witnesses. Trends in Ecology and Evolution 16: 314 – 321.

Berthier K., Chapuis M.- P., Moosavi S. M., Tohidi-Esfahani D., Sword G. A. 2011.

Nuclear insertions and heteroplasmy of mitochondrial DNA as two sources of intra-individual genomic variation in grasshoppers. Systematic Entomology 36: 285 – 299.

Bridle J. R., Garn A.-K., Monk K. A., Butlin R. K. 2001. Speciation in Chitaura

grasshoppers (Acrididae: Oxyinae) on the island of Sulawesi: Colour patterns, morphology and contact zones. Biological Journal of the Linnean Sociey 72: 373 – 390.

Buckley T. R., Attanayake D., Nylander J. A. A., Bradler S. 2010. The phylogenetic

placement and biogeographical origins of the New Zealand stick insects. (Phasmatodea). Systematic Entomology 35: 207 – 225.

Bugrov A., Novikova O., Mayorov V., Adkison L., Blinov A. 2006. Molecular

phylogeny of Palaearctic genera of Gomphocerinae grasshoppers (Orthoptera: Acrididae). Systematic Entomology 31: 362 – 368.

Butlin R. K., Walton C., Monk K. A., Bridle J. R. 1998. Biogeography of Sulawesi

grasshoppers, genus Chitaura, using DNA sequence data. pp. 355 – 359 in: Biogeography and Geological Evolution of South East Asia. Hall R. and Holloway J. D. (eds.) Backhuys, Leiden, The Netherlands.

C Cameron S. L., Barker S. C., M. F. 2006. Mitochondrial genomics and the new insect

order Mantophasmatodea. Molecular Phylogenetics and Evolution 38: 274 – 279.

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Carstens B. C., Knowles L. 2007. Shifting distributions and speciation: Species

divergence during rapid climate change. Molecular Ecology 16: 619 – 627. Chapco W. 1997. Molecular evolutionary genetics in orthopteroid insects. pp. 337 – 354

in: The Bionomics of Grasshoppers, Katydids and Their Kin. S. K. Gangwere, M. C. Muralirangan, M. Muralirangan (eds.). CAB International.

Chapco W. 2006. A note on the phylogenetic position of Duartettix montanus within the

subfamily Melanoplinae. Journal of Orthoptera Research 15: 59 – 63. Chapco W., Kuperus W. R., Litzenberger G. 1999. Molecular phylogeny of melanopline

grasshoppers (Orthoptera: Acrididae): The genus Melanoplus. Annals of the Entomological Society of America 92: 617 - 623.

Chapco W., Litzenberger G., Kuperus W. R. 2001. A molecular biogeographic analysis

of the relationship between North American melanopline grasshoppers and their Eurasian and South American relatives. Molecular Phylogenetics and Evolution 18: 460 - 466.

Chapco W., Litzenberger G. 2002. A molecular phylogenetic analysis of the grasshopper

genus Melanoplus Stål (Orthoptera: Acrididae) – an update. Journal of Orthoptera Research 11: 1 – 9.

Chapco W., Litzenberger G. 2002. A molecular phylogenetic study of two relict species

of melanopline grasshoppers. Genome 45: 313 - 318. Chapco W., Litzenberger G. 2004. A DNA investigation into the mysterious

disappearance of the Rocky Mountain grasshopper, mega-pest of the 1800s. Molecular Phylogenetics and Evolution 30: 810 – 814.

Chapco W., Contreras D. 2011. Subfamilies Acridinae, Gomphocerinae and Oedipodinae

are “fuzzy” sets: A proposal for a common African origin. Journal of Orthoptera Research 20: 173 – 190.

Chappell E. M., Trewick S. A., Morgan-Richards M. 2012. Shape and sound reveal

genetic cohesion not speciation in the New Zealand orthopteran, Hemiandrus pallitarsis, despite high mitochondrial DNA divergence. Biological Journal of the Linnean Society 105: 169 – 186.

Chapuis M.-P., Lecoq M., Michalakis Y., Loiseau A., Sword G. A., Piry S. 2008. Do

outbreaks affect genetic population structure? A worldwide survey in Locusta migratoria, a pest plagued by microsatellite null alleles. Molecular Ecology 17: 3640 – 3653.

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Chapuis M.-P., Loiseau A., Michalakis Y., Lecoq M., Franc A., Estoup A. 2009. Outbreaks, gene flow and effective population size in the migratory locust, Locusta migratoria: A regional-scale comparative survey. Molecular Ecology 18: 792 – 800.

Chinn W. G., Gemmell N. J. 2004. Adaptive radiation within New Zealand endemic

species of the cockroach genus Celatoblatta Johns (Blattidae): A response to Plio-Pleiostocene mountain building and climate change. Molecular Ecology 13: 1507 – 1518.

Chintauan-Marquier I. C., Jordan S., Berthier P., Amédégnato C., Pompanon F. 2011. Evolutionary history and taxonomy of a short-horned grasshopper subfamily: The Melanoplinae (Orthoptera: Acrididae). Molecular Phylogenetics and Evolution 58: 22 – 32.

Cigliano M. M., Amédégnato C. 2010. The high-Andean Jivarus Giglio-Tos (Orthoptera:

Acridoidea, Melanoplinae): Systematics, phylogenetic and biogeographic considerations. Systematic Entomology 35: 692 – 721.

Clemente M., Remis M. I., Vilardi J. C. 2000. Mitochondrial DNA variation in the South

American grasshopper Dichroplus elongatus (Orthoptera: Acrididae). Annals of the American Society of Entomology 93: 653 – 662.

Clemente M., Remis M. I., Vilardi J. C. 2002. Ribosomal DNA variation in the

grasshopper, Dichroplus elongatus. Genome 45: 1125 – 1233. Colombo P., Cigliano M. M., Sequeira A. S., Lange C. E., Vilardi J. C., Confalonieri V.

A. 2005. Phylogenetic relationships in Dichroplus Stål (Orthoptera: Acrididae: Melanoplinae) inferred from molecular and morphological data: Testing karyotype diversification. Cladistics 21: 375 – 389.

Confalonieri V. A., Sequeira A. S., Todaro L, Vilardi J. C. 1998. Mitochondrial DNA and

phylogeography of the grasshopper Trimerotropis pallidipennis in relation to clinal distribution of chromosome polymorphisms. Heredity 81: 444 – 452.

Confalonieri V. A., Scataglini M. A., Remis M. I.. 2002. Sequence differentiation among

inversion rearrangement are revealed by random amplified polymorphic DNA markers in the grasshopper Trimerotropis pallidipennis (Orthoptera: Acridinae: Oedipodinae). Annals of the Entomological Society of America 95: 201 – 207.

Contreras D., Chapco W. 2006. Molecular phylogenetic evidence for multiple dispersal events in gomphocerines grasshoppers. Journal of Orthoptera Research 15: 91 – 98.

Crone E. J, Zera A. J., Anand A., Oakeshott J. G, Sutherland T. D, Russell R. J, Harshman L. G., Hoffmann F. G, Claudianos C. 2007. Jhe in Gryllus assimilis:

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cloning, sequence-activity associations and phylogeny. Insect Biochemistry and Molecular Biology 37: 1359 – 1365.

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Da Silva J. B. T., Tigano M. S., Magalhães B. P., Cordiero C. M. T. 2002. Polymorphism of the grasshopper Rhammatocerus schistocercoides populations revealed by RAPD. Pesquisa Agropecuária Brasileira 37: 1669 – 1673.

Damgaard J., Klass K.-D., Picker M. D., Buder G. 2008. Phylogeny of the Heelwalkers

(Insecta: Mantophasmatodea) based on mtDNA sequences, with evidence for additional taxa in South Africa. Molecular Phylogenetics and Evolution 47: 443 – 462.

Danley P. D., Mullen S. P., Liu F., Nene V., Quackenbush J., Shaw K. L. 2007. A cricket Gene Index: A genomic resource for studying neurobiology, speciation, and molecular evolution. BMC Genomics 8: 109.

Dawson D. A., Bretman A. J., Tregenza T. 2003. Microsatellite loci for the field cricket, Gryllus bimaculatus and their cross-utility in other species of Orthoptera. Molecular Ecology Notes 3: 191 – 195.

Dearden P., Akam M. 2000. A role for Fringe in segment morphogenesis but not segment

formation in the grasshopper, Schistocerca gregaria. Development Genes and Evolution 210: 329 – 336.

Ding F. M., Shi H. W., Huang Y. 2007. Complete mitochondrial genome and secondary

structures of lrRNA and srRNA of Atractomorpha sinensis (Orthoptera, Pyrgomorphidae). Zoological Research 28: 580 – 588.

Djernæs M., Klass K.-D., Picker M. D., Damgaard J. 2011. Phylogeny of cockroaches

(Insecta, Dictyoptera, Blattodea), with placement of aberrant taxa and exploration of out-group sampling. Systematic Entomology 37: 65 – 83.

Dopman E. B., Sword G. A., Hillis D. M. 2002. The importance of the ontogenetic niche in resource-associated divergence: Evidence from a generalist grasshopper. Evolution 56: 731 – 740.

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Edelman W. C., Lightfoot D. C., Miller K. B. 2010. The phylogenetic placement of the rare North American band-winged grasshopper Shotwellia isleta Gurney, 1940 (Orthoptera: Acrididae: Oedipodinae). Insect Systematics and Evolution 41: 303 – 316.

Erler S., Ferenz H.-J., Moritz R. F. A., Kaatz H.-H. 2010. Analysis of the mitochondrial genome of Schistocerca gregaria gregaria (Orthoptera: Acrididae). Biological Journal of the Linnaean Society 99: 296 – 305.

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Fenn J. D., Cameron S. L., Whiting M. F. 2007. The complete mitochondrial genome sequence of the Mormon cricket (Anabrus simplex: Tettigoniidae: Orthoptera) and an analysis of control region variability. Insect Molecular Biology 16: 239 – 252.

Fenn J. D., Song H., Cameron S. L., Whiting M. F. 2008. A preliminary mitochondrial genome phylogeny of Orthoptera (Insecta) and approaches to maximizing phylogenetic signal found within mitochondrial genome data. Molecular Phylogenetics and Evolution 49: 59 – 68.

Ferreira M., Ferguson J. W. 2010. Do Mediterranean crickets Gryllus bimaculatus De Geer (Orthoptera: Gryllidae) come from the Mediterranean? Largescale phylogeography and regional gene flow. Bulletin of Entomological Research 100: 49 – 58.

Filipenko M. L., Timofeeva O. A., Gusachenko A. M.,. Sergeev M. G, Vysotskaia L. V. 2000. Reconstruction of phylogeny of locusts from the family Acrididae (Orthoptera) based on analysis of nucleotide sequences of 16S ribosome RNA gene in mitochondria. Genetika 36: 1355 – 1361.

Flook P. K., Rowell C. H. F. 1997. The phylogeny of the Caelifera (Insecta, Orthoptera) as deduced from mtrRNA gene sequences. Molecular Phylogenetics and Evolution 8: 89 – 103.

Flook P. K., Rowell C. H. F. 1997. The effectiveness of mitochondrial rRNA gene

sequences for the reconstruction of the phylogeny of an insect order (Orthoptera). Molecular Phylogenetics and Evolution 8: 177 – 192.

Flook P. K., Rowell C. H. F. 1998. Inferences about orthopteroid phylogeny and

molecular evolution from small subunit nuclear ribosomal DNA sequences. Insect Molecular Biology 7: 163 – 178.

Flook P. K., Klee S., Rowell C. H. F. 1999. Combined molecular phylogenetic analysis

of the Orthoptera (Arthropoda, Insecta) and implications for their higher systematics. Systematic Biology 48: 233 – 253.

Flook P. K., Klee S., Rowell C. H. F. 2000. Molecular phylogenetic analysis of the

Pneumoroidea (Orthoptera: Caelifera): Molecular data resolve morphological character conflicts in the basal Acridomorpha. Molecular Phylogenetics and Evolution 15: 345 – 354.

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Fries M., Chapco W., Contreras D. 2007. A molecular phylogenetic analysis of the Oedipodinae and their intercontinental relationships. Journal of Orthoptera Research 16: 115 – 125.

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Gaunt M. W., Miles M. A. 2002. An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks. Molecular Biology and Evolution 19: 748 – 761.

Grace T., Joern A., Apple J. L., Brown S. J., Wisely S. M. 2009. Highly polymorphic microsatellites in the North American snakeweed grasshopper, Hesperotettix viridis. Journal of Orthoptera Research 18: 19 – 21.

Guliaeva O. N., Vysotskaya L. V., Sergeev M. G. 2005. Taxonomic and phylogenetic relationships of the Holarctic grasshoppers (Orthoptera: Acrididae): A new view on old problems. Euroasian Entomological Journal 4: 87 – 94.

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Hemp C., Voje K. L., Heller K.-G., Hemp A. 2009. Biogeography, phylogeny and

acoustics of the flightless bush-crickets of the East African genus Monticolaria Sjöstedt, 1909, with the description of a new species (Orthoptera: Phaneropterinae). Zoological Journal of the Linnean Society 156: 494–506.

Hemp C., Kehl S., Heller K.-G., Kehl S., Warchalowska-Śliwa E., Wägele J. W., Hemp

A. 2011. The Phlesirtes complex (Orthoptera, Tettigoniidae, Conocephalinae, Conocephalini) reviewed: Integrating morphological, molecular, chromosomal and bioacoustic data. Systematic Entomology 35: 554 – 580.

Hemp C., Kehl S., Heller K.-G., Wägele J. W., Hemp A. 2012. Ecological adaptations of

grassland-inhabiting flightless Orthoptera: Fulvoscirtes and Acanthoscirtes, two new genera of African Karniellina (Orthoptera, Tettigoniidae, Conocephalinae, Conocephalini). Systematic Entomology 37: 387 – 407.

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Hochkirch A., Görzig Y. 2009. Colonization and speciation on volcanic islands:

phylogeography of the flightless grasshopper genus Arminda (Orthoptera, Acrididae) on the Canary Islands. Systematic Entomology 34: 188 – 197.

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Huang Y., Orti G., Sutherlin M., Duhachek A., Zera A. 2000. Phylogenetic relationships of North American field crickets inferred from mitochondrial DNA data. Molecular Phylogenetics and Evolution 17: 48 – 57.

Huo G., Jiang G., Sun Z., Liu D., Zhang Y., Lu L. 2007. Phylogenetic reconstruction of

the family Acrypteridae (Orthoptera: Acridoidea) based on mitochondrial cytochrome b gene. Journal of Genetics and Genomics 34: 294 – 306.

Husemann M., Guzman N. V., Danley P. D., Cigliano M. M., Confalonieri V. A. 2012.

Biogeography of Trimerotropis pallidipennis (Acrididae: Oedipodinae): Deep divergence across the Americas. Journal of Biogeography 40: 261 – 273.

Husemann M., Namkung S., Habel J. C., Danley P. D., Hochkirch A. 2012. Phylogenetic

analyses of band-winged grasshoppers (Orthoptera, Acrididae, Oedipodinae) reveal convergence of wing morphology. Zoologica Scripta 41: 515 – 526.

Ibrahim K. M., Sourrouille P., Hewitt G. M. 2000. Are recession populations of the desert

locust (Schistocerca gregaria) remnants of past swarms? Molecular Ecology 9: 783 – 791.

I Inward D., Beccaloni G., Eggleton P. 2007. Death of an order: A comprehensive

molecular phylogenetic study confirms that termites are eusocial cockroaches. Biology Letters 3: 331 – 335.

J Jaiswara R., Balakrishnan R., Robillard T., Rao K., Cruaud C., Desutter-Grandcolas L.

2012. Testing concordance in species boundaries using acoustic, morphological, and molecular data in the field cricket genus Itaropsis (Orthoptera: Grylloidea, Gryllidae: Gryllinae). Zoological Journal of the Linnean Society 164: 285 – 303.

Jiang F., Yang M., Guo W., Wang X., Kang L. 2012. Large-scale transcriptome analysis of retroelements in the migratory locust, Locusta migratoria. PLoS One 7: e40532.

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Kawakami T., Butlin R. K., Adams M., Saint K. M., Paull D. J., Cooper S. J. B. 2007. Differential gene flow of mitochondrial and nuclear DNA markers among chromosome races of Australian morabine grasshoppers (Vandiemenella viatica species group). Molecular Ecology 16: 5044 – 5056.

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Kawakami T., Butlin R. K., Adams M., Paull D. J., Cooper S. J. B. 2009. Genetic analysis of a chromosomal hybrid zone in the Australian morabine grasshoppers (Vandiemenella viatica species group). Evolution 63: 139 – 152.

Kawakami T., Butlin R. K., Adams M., Paull D. J., Cooper S. J. B. 2009. Re-examination

of a proposed case of stasipatric speciation: Phylogeography of the Australian morabine grasshoppers (Vandiemenella viatica species group). Molecular Ecology 18: 3429 – 3442.

Kaya S., Boztepe Z., Çiplak B. 2012. Phylogeography of Troglophilus (Orthoptera:

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Kim I., Cha S. Y., Kim M. A, Lee Y. S., Lee K. S., Choi Y. S, Hwang J. S., Jin B. R., Han Y. S. 2007. Polymorphism and genomic structure of the A+T-rich region of mitochondrial DNA in the oriental mole cricket, Gryllotalpa orientalis (Orthoptera: Gryllotalpidae). Biochemical Genetics 45: 589 – 610.

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Knowles L. L. 2000. Tests of Pleistocene speciation in montane grasshoppers (genus

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Knowles L. L. 2001. Did the Pleistocene glaciations promote divergence? Tests of

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Knowles L. L., Lanier H. C., Klimov P. B., He Q. 2012. Full modeling versus

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Li B., Liu Z., Zheng Z.-M. 2011. Phylogeny and classification of the Catantopidae at the

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Li T., Zhang M., Qu Y., Ren Z., Zhang J., Guo Y., Heong K. L., Villareal B., Zhong Y., Ma E. 2011. Population genetic structure and phylogeographical pattern of rice grasshopper, Oxya hyla intricata, across Southeast Asia. Genetica 139: 511 – 524.

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Litzenberger G., Chapco W. 2001. A molecular phylogeographic perspective on a fifty-year-old taxonomic issue in grasshopper systematics. Heredity 86: 54 – 59.

Litzenberger G., Chapco W. 2001. Molecular phylogeny of selected Eurasian podismine grasshoppers (Orthoptera: Acrididae). Annals of the Entomological Society of America 94: 505 – 511.

Litzenberger G., Chapco W. 2003. The North American Melanoplinae (Orthoptera: Acrididae): A molecular phylogenetic study of their origins and taxonomic relationships. Annals of the American Society of Entomology 96: 491 – 497.

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Lovejoy N. R., Mullen S. P., Sword G. A., Chapman R. F., Harrison R. G. 2006. Ancient trans-Atlantic flight explains locust biogeography: Molecular phylogenetics of Schistocerca. Proceedings of the Royal Society B 273: 767 – 774.

Lu H.-H., Huang Y. 2006. Phylogenetic relationship of 16 Oedipodidae species (Insecta : Orthoptera) based on the 16S rRNA gene sequences. Insect Science 13: 103 – 108.

Lui D., Dong Z., Zhang D., Gu Y., Guo P., Han R., Hang G. 2008. Molecular phylogeny of the higher category of Acrididae (Orthoptera: Acridoidea). Zoological Research 29: 585 – 591.

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Ma L., Huang Y. 2006. Molecular phylogeny of some subfamilies of Catantopidae (Orthoptera: Caelifera: Acridoidea) in China based on partial sequence of mitochondrial CO II gene. Acta Entomologica Sinica 49: 982 – 990.

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Ma C., Liu C., Yang P., Kang L. 2009. The complete mitochondrial genomes of two band-winged grasshoppers, Gastrimargus marmoratus and Oedaleus asiaticus. Genomics 10: 156 – 173.

Ma C., Yang P., Jiang F., Chapuis M.-P., Shali Y., Sword G. A., Kang L. 2012.

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Maekawa K., Lo N., Rose H. A., Matsumoto T. 2003. The evolution of soil-burrowing cockroaches (Blattaria: Blaberidae) from wood-burrowing ancestors following an invasion of the latter from Asia into Australia. Proceedings of the Royal Society of London B 270: 1301 – 1307.

Maroja L. S., Andrés J., A., Harrison R. G. 2009. Genealogical discordance and patterns of introgression and selection across a cricket hybrid zone. Evolution 63: 2999 – 3015.

Marshall J. L., Huestis D. L., Garcia C., Hiromasa Y., Wheeler S., Noh S., Tomich J. M., Howard D. J. 2011. Comparative proteomics uncovers the signature of natural selection acting on the ejaculate proteomes of two cricket species isolated by postmating, prezygotic phenotypes. Molecular Biology and Evolution 28: 423 – 435.

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Martinsen L., Venanzetti F., Johnsen A., Sbordoni V., Bachmann L. 2009. Molecular evolution of the pDo500 satellite DNA family in Dolichopoda cave crickets (Rhaphidophoridae). BMC Evolutionary Biology 9: 301.

Martinsen L., Johnsen A., Venanzetti F., Bachmann L. 2010. Phylogenetic footprinting of non-coding RNA: Hammerhead ribozyme sequences in a satellite DNA family of Dolichopoda cave crickets (Orthoptera, Rhaphidophoridae). BMC Evolutionary Biology 10: 3.

Matt S., Flook P. K., Rowell C. H. F. 2008. A partial molecular phylogeny of the Emastacoidea s. lat. (Orthoptera: Caelifera). Journal of Orthoptera Research 17: 43 – 55.

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Morgan-Richards M. 2002. Fission or fusion? Mitochondrial DNA phylogenetics of the chromosome races of Hemideina crassidens (Orthoptera: Anostostomatidae). Cytogenetic and Genome Research 96: 217 – 222.

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