308
MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

Embed Size (px)

Citation preview

Page 1: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL NUTRITION,

GROWTH, MEASUREMENT, AND CONTROL

Page 2: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

RESOURCES ON LINE• http://www.bact.wisc.edu/Microtextbook/i

ndex

• AN ONLINE TEXTBOOK

• http://www.bact.wisc.edu/bact100/KimballLinks.html

• http://science.nhmccd.edu/Biol/microbio.html

• http://science.nhmccd.edu/BioL/animatio.htm

Page 3: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL NUTRITION

Page 4: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL HABITATS

• OCEANS

• ANTARCTIC ICE CAP

• VERTEBRATE AND INVERTEBRATE GUT

• JAMS, JELLIES, PICKLES

• VIRTUALLY EVERYWHERE

Page 5: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL NUTRITION

• ORGANISMS MUST GET FOOD FROM ENVIRONMENT

• WIDE VARIETY OF NUTRITIONAL STRATEGIES

• http://www.mansfield.ohio-state.edu/~sabedon/campbl27.htm#photoheterotroph

Page 6: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NUTRITIONAL TYPES• PHOTOAUTOTROPHS• CHEMOAUTOTROPHS• PHOTOHETEROTROPHS• CHEMOHETEROTROPHS• http://72.14.203.104/search?

q=cache:EkMmMJD4ZtIJ:rcw.raiuniversity.edu/biotechnology/BTechbiotech/microbesandus/lecture-notes/lecture-10.pdf+microbial+nutrition+chemoheterotroph+photoheterotroph+photoautotroph&hl=en&gl=us&ct=clnk&cd=5

• http://www.sinauer.com/perry/Perry_SG_05.pdf

Page 7: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PHOTOAUTOTROPHS

• LIGHT AS ENERGY SOURCE• CARBON DIOXIDE AS CARBON

SOURCE• H2O, H2, OR H2S AS ELECTRON DONOR• http://72.14.203.104/search?

q=cache:sclpkxyy_VMJ:www.homepage.montana.edu/~umbls/mb301/lecquiz2key.pdf+photoautotroph&hl=en&gl=us&ct=clnk&cd=26

Page 8: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OXYGENIC PHOTOSYNTHESIZERS

• OXYGEN GIVEN OFF• GENERATED FROM WATER• PHOTOSYSTEM II PRESENT• CYANOBACTERIA, ALGAE, AND

GREEN PLANTS• http://72.14.203.104/search?

q=cache:3iUlq0IL7tsJ:meetings.copernicus.org/egu2005/download/EGU05-J-11198-1.pdf+oxygenic+photosynthesizer&hl=en&gl=us&ct=clnk&cd=5

Page 9: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ANOXYGENIC PHOTOSYNTHESIZERS

• DO NOT USE WATER• USE H2S, H2 , SULFUR OR SULFIDE• USE BACTERIOCHLOROPHYLLS• http://72.14.203.104/search?

q=cache:3iUlq0IL7tsJ:meetings.copernicus.org/egu2005/download/EGU05-J-11198-1.pdf+anoxygenic+photosynthesizer&hl=en&gl=us&ct=clnk&cd=2

Page 10: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PHOTOHETEROTROPHS

• LIGHT AS ENERGY SOURCE

• NEED ORGANIC COMPOUNDS OR HYDROGEN GAS AS ELECTRON DONOR

• GREEN NONSULFUR BACTERIA

• PURPLE NONSULFUR BACTERIA

• http://www.sinauer.com/perry/MicrobialLife05.pdf

Page 11: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHEMOAUTOTROPHS

• REDUCED INORGANIC MOLECULES ACT AS CARBON AND ENERGY SOURCES

• INORGANIC MOLECULE FINAL ELECTRON ACCEPTOR

• CARBON DIOXIDE ACTS AS CARBON SOURCE

• ENERGY OBTAINED FROM H2, NH3, H2S, ELEMENTAL SULFUR, NO2 and Fe+2.

• http://uweb.cas.usf.edu/~kscott/chemoautotrophy.htmhttp://highered.mcgraw-hill.com/sites/0078664276/student_view0/unit1/chapter4/check_challenge_quiz_3.html

Page 12: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHEMOHETEROTROPHS

• USE PREFORMED CARBON COMPOUNDS AS ENERGY AND CARBON SOURCE

• USUALLY THE SAME ORGANIC COMPOUND

• FUNGI, ANIMALS, PROTOZOA AND MOST BACTERIA

• http://www.bact.wisc.edu/bact100/origins.html

Page 13: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SAPROPHYTE VS PARASITE

• SAPROPHYTE USES DEAD ORGANIC MATTER

• PARASITE USES LIVING HOST

Page 14: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL NUTRITION

• http://www.mansfield.ohio-state.edu/~sabedon//biol2015.htm

• http://www.agen.ufl.edu/~chyn/age4660/lect/lect_02/lect_02.htm

Page 15: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MACRONUTRIENTS

• NEEDED IN LARGE AMOUNTS• CARBON• HYDROGEN• OXYGEN• NITROGEN• PHOSPHORUS• SULFUR• http://www.biologie.uni-hamburg.de/b-online/

library/micro229/terry/229sp00/lectures/nutrition.html

Page 16: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CARBON

• FORMS CARBON SKELETON OF ORGANIC MOLECULES

• CARBON DIOXIDE MOST COMMON SOURCE

Page 17: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OXYGEN

• FOUND IN MOST ORGANIC MOLECULES

• ATMOSPHERIC

• CHEMICALLY BOUND

• OXYGENASES

Page 18: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TOXIC OXYGEN COMPOUNDS

• OXYGEN ITSELF• HYDROGEN PEROXIDE• SUPEROXIDE RADICAL• HYDROXYL RADICAL• http://www.sigmaaldrich.com/

Area_of_Interest/Biochemicals/Enzyme_Explorer/Cell_Signaling_Enzymes/Superoxide_Dismutase.html

Page 19: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENZYMES THAT DETOXIFY FREE RADICALS

• SUPEROXIDE DISMUTASE

• CATALASE• PEROXIDASE

Page 20: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OXYGEN RELATIONSHIPS

• OBLIGATE AEROBES• FACULATIVE ANAEROBES OR

FACULATIVE AEROBES• MICROAEROPHILES• AEROTOLERANT ANAEROBES• OBLIGATE ANAEROBES• http://www.jlindquist.net/generalmicro/

dfthiognf.html

Page 21: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HYDROGEN

• FOUND IN ORGANIC MOLECULES

• CHEMIOSOMOSIS

• REDUCES CARBON DIOXIDE IN CALVIN CYCLE

Page 22: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PHOSPHORUS

• FOUND IN ATP

• PHOSPHOLIPIDS

Page 23: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NITROGEN

• COMPONENT OF NUCLEIC ACIDS

• COMPONENT OF PROTEINS

• COMPONENT OF COENZYMES

Page 24: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SULFUR

• COMPONENT OF ACETYL COA

• COMPONENT OF PROTEINS

• MOST MICROBES USE SULFATE

Page 25: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OTHER ELEMENTS USED BY MICROBES

• POTASSIUM

• MAGNESIUM

• IRON

• CALCIUM

Page 26: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

IRON

• COMPONENT OF HEME GROUPS

• FERRIC AND FERROUS FORMS

• CHELATORS INCREASE ABSORPTION

Page 27: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROELEMENTS

• MOLYBEDNUM

• COBALT

• COPPER

• NICKEL

• MANGANESE

Page 28: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OTHER ELEMENTS USED BYA RELATIVE FEW ORGANISMS

• SELENIUM & TUNGSTEN– ARCHAEBACTERIA

• SODIUM AND CHLORIDE IONS– HALOPHILES

Page 29: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ACCESSORY GROWTH FACTORS

• VITAMINS

• FATTY ACIDS

• AMINO ACIDS

• PURINES AND PYRMIDINES

Page 30: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

VITAMINS

• DIFFERENT ORGANISMS HAVE DIFFERENT VITAMIN NEEDS

• NEEDS CAN VARY WITH CONDITIONS

Page 31: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FATTY ACIDS

• SOME BACTERIA AND PROTOZOA NEED FATTY ACIDS

• MYCOPLASMAS NEED CHOLESTEROL OR OTHER STEROLS

Page 32: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

AMINO ACIDS

• NEEDS VARY

• MUST INCORPORATE INTO MEDIA

Page 33: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PURINES AND PYRIMIDINES

• SOME MICROBES ARE UNABLE TO SYNTHESIZE THEIR OWN

• MUST BE INCLUDED IN MEDIAADENINE THYMINE

Page 34: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EUTROPHIC VS OLIGOTROPHIC ENVIRONMENTS

Page 35: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EUTROPHIC ENVIRONMENTS

• ABUNDANCE OF NUTRIENTS

• NO LIMITING FACTORS

• CULTURAL EUTROPHICATION

• http://www.umanitoba.ca/institutes/fisheries/eutro.html

Page 36: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SOURCES OF CULTURAL EUTROPHICATION

• MAN’S ACTIVITY INCREASES NUTRIENTS IN ENVIRONMENT– FARMING– SEWAGE

• INCREASE BIOLOGICAL OXYGEN DEMAND– BOD

Page 37: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OLIGOTROPHIC ENVIRONMENTS

• FEW NUTRIENTS• STREAMS • RIVERS • SOME SOILS

Page 38: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

LABORATORY CULTURE

http://www.bact.wisc.edu/Microtextbook/index.php?

module=Book&func=displayarticle&art_id=26

Page 39: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NUTRIENT UPTAKE

• SPECIFIC• OFTEN MUST MOVE AGAINST

CONCENTRATION GRADIENT• http://users.rcn.com/jkimball.ma.ultranet/Bi

ologyPages/D/Diffusion.html#Facilitated_diffusion

• http://web.mit.edu/esgbio/www/cb/membranes/transport.html

Page 40: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TRANSPORTATION MECHANISMS

• DIFFUSION• OSMOSIS• FACILITATED

DIFFUSION• ACTIVE

TRANSPORT• GROUP

TRANSLOCATION

Page 41: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DIFFUSION

• SMALL NONPOLAR SUBSTANCES

• DOWN CONCENTRATION GRADIENT

• CARBON DIOXIDE• OXYGEN• CARBON DIOXIDE

Page 42: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

• MOLECULES SPREAD FROM AREAS OF HIGH CONCENTRATIION, TO AREAS OF LOW CONCENTRATION

• . MOLECULES EVENTUALLY EVENOUT THROUGHOUT A SPACE - EQUILIBRIUM

• CONCENTRATION GRADIENT - A DIFFERENCE BETWEEN CONCENTRATIONS IN A SPACE

Page 43: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FACILITATED DIFFUSION

• PASSIVE PROCESS

• PERMEASES

• DOES NOT HAPPEN MUCH IN PROKARYOTES

• MORE IMPORTANT IN EUKARYOTES

Page 45: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL
Page 46: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ACTIVE TRANSPORT

• MOVE MATERIALS AGAINST CONCENTRATION GRADIENT

• USES ENERGY TO POWER

• CARRIER MOLECULES

• ANTIPORT

• SYMPORT OR COTRANSPORT

Page 50: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THE PRICE OF ACTIVE TRANSPORT

• ATP OR OTHER PHOSPHATE MOLECULES

• PROTON MOTIVE FORCE

Page 51: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GROUP TRANSLOCATION

• MOLECULES ARE MODIFIED AS THEY CROSS CELL MEMBRANE

• PHOSPHOPHENOLPYRUVATE: SUGAR PHOSPHOTRANSFERASE

• WIDESPREAD IN PROKARYOTES• VARIETY OF FORMS

Page 53: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENDOCYTOSIS VS EXOCYTOSIS

EUKARYOTIC MECHANISM

Page 54: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENDOCYTOSIS

• MOVEMENT OF MATERIALS INTO THE CELL– PHAGOCYTOSIS = ‘CELL EATING’

• BY MACROPHAGES & WBCS• PARTICLE BINDS TO RECEPTOR PROTEIN• WHOLE BACTERIA OR VIRUSES ARE ENGULFED & LATER

DIGESTED

– PINOCYTOSIS = CELL DRINKING• NO RECEPTOR PROTEINS

– RECEPTOR-MEDIATED ENDOCYTOSIS = SELECTIVE INPUT

• MECHANISM BY WHICH HIV VIRUS ENTERS CELLS

Page 55: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

Pinocytosis and Phagocytosis

• Pseudopods extend to form phagosome

• Lysosome joins it

• No pseudopods form• Nonselective drinking of extracellular

fluid

Page 56: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PINOCYTOSIS

Page 57: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PHAGOCYTOSIS

Page 58: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

Receptor-Mediated Endocytosis• Mechanism for uptake of specific

substances -- ligands

• Desired substance binds to receptor protein in clathrin-coated pit region of cell membrane causing membrane to fold inward

• Vesicles become uncoated & combine with endosome

• Receptor proteins separate from ligands and return to surface

• Ligands are digested by lysosomal enzymes or transported across cell -- epithelial cell crossing accomplished

Page 59: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

• http://cellbio.utmb.edu/cellbio/recend.htm#Menu

Page 60: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EXOCYTOSIS

• MOVEMENT OF MATERIALS OUT OF CELL

• ‘CELL VOMITING’• Vesicles form inside cell,

fuse to cell membrane

• Release their contents– digestive enzymes,

hormones, neurotransmitters or waste products

• replace cell membrane lost by endocytosis

Page 61: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

http://bio.winona.msus.edu/berg/ANIMTNS/Secrtion.htm

Page 62: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

IRON UPTAKE

• USED FOR CYTOCHROMES AND ENZYMES

• FERRIC IRON INSOLUBLE

• SIDEROPHORES

Page 64: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CLASSIFICATION OF MEDIA

• PHYSICAL FORM

• CHEMICAL CHARACTERISTICS

• FUNCTIONAL TYPES

Page 65: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

LIQUID MEDIA

• AQUEOUS FORMULATION• DOES NOT GEL OR

SOLIDIFY AT ROOM TEMP• FLOW FREELY• BROTHS• MILKS• NUTRIENT SOLUTIONS

Page 66: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SEMISOLID MEDIA

• SOLID AT ROOM TEMP• GELATINOUS TEXTURE• 0.3% TO 0.5% AGAR• USED TO RESTRICT

MOVEMENT OF MOTILE MICROBES, GROW MICROAEROPHILES OR ANAEROBES

• SIM AGAR• MOTILITY MEDIA

Page 67: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SOLID MEDIA

• PROVIDES FIRM SURFACE

• LIQUEFIABLE OR NONLIQUEFIABLE

• DISTINCT COLONIES FORM

Page 68: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

LIQUEFIABLE SOLID MEDIA

• REVERSIBLE SOLID MEDIA

• THERMOPLASTIC SOLIDIFYING AGENT

• AGAR OR GELATIN

Page 69: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GELATIN WAS FIRST SOLIDIFYING AGENT

• DRAWBACKS• CAN BE LIQUID AT

ROOM TEMP• MANY MICROBES

DIGEST

Page 70: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BENEFITS OF AGAR-AGAR

• COMPLEX POLYSACCHARIDE

• SOLID AT ROOM TEMPERATURE

• LIQUEFIES AT 100 DEGREES C

• DOES NOT RESOLIDIFY UNTIL IT COOLS TO 42 DEGREES C

• CAN BE INOCULATED AND POURED IN LIQUID FORM

• MOLDABLE AND FLEXIBLE FRAMEWORK FOR MOISTURE AND NUTRIENTS

• NOT EASILY DIGESTED

Page 71: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NONLIQUEFIABLE SOLID MEDIA

• NOT THERMOPLASTIC

• RICE• POTATOE• MEAT• EGG MEDIA• SERUM MEDIA• LESS VERSATILE

Page 72: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHEMICAL CONTENT OF MEDIA

• CHEMICALLY DEFINED OR SYNTHETIC

• NONSYNTHETIC OR EMPIRICAL MEDIA

Page 73: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FUNCTIONAL CATEGORIES

• GENERAL PURPOSE

• ENRICHED

• SELECTIVE

• ENRICHMENT MEDIA

Page 74: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GENERAL PURPOSE MEDIA

• GROW A BROAD SPECTRUM

• USUALLY NONSYNTHETIC

• NUTRIENT BROTH AND AGAR

• TRYPTIC SOY BROTH AND AGAR

• BLOOD AGAR

• BRAIN-HEART INFUSION AGAR

Page 75: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENRICHED MEDIA

• SIMILAR TO GENERAL PURPOSE MEDIA

• ENRICHED WITH BLOOD, SERUM, HEMOGLOBIN, OR GROWTH FACTORS

• BLOOD AGAR

• THAYER MARTIN AGAR

Page 76: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTIVE METHODS

• SELECTIVE ENRICHMENT

• SELECTIVE REPRESSION

Page 77: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTIVE ENRICHMENT

• VARYING TEMPERATURE

• pH

• CHEMICAL ENVIRONMENT

Page 78: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENRICHMENT MEDIA

• EXTREMELY SELECTIVE MEDIA

• FAVORS GROWTH OF PATHOGENS FOUND IN LOW NUMBERS

• SELENITE

• BRILLIANT GREEN

• POTASSIUM TELLURITE

Page 79: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTIVE MEDIA

• HAS AGENT/S THAT INHIBITS GROWTH OF CERTAIN MICROBES

• SELECTS FOR GROWTH OF OTHERS

• IMPORTANT FOR IDENTIFICATION FROM SAMPLES

• MANNITOL SALT AGAR

• MacCONKEY AGAR

• EMB AGAR

Page 80: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTIVE REPRESSION

• STOPS OR SLOWS THE THE GROWTH OF INTERFERING ORGANISMS

• TOXIC CHEMICALS

• TEMPERATURE

Page 81: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DIFFERENTIAL MEDIA

• EXPLOITS PHYSIOLOGICAL & OTHER CHARACTERISTICS TO DISTINGUISH COLONIES

• CONTAIN REAGENTS

• DO NOT NECESSARILY ENRICH OR REPRESS

• BLOOD AGAR

• EMB

Page 82: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DIFFERENTIAL MEDIA

• GROW SEVERAL TYPES OF MICROBES

• WILL HAVE VARYING APPEARANCES DUE TO AGENTS

Page 83: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EXAMPLES OF AGARS

Page 84: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EMB AGAR

Page 85: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MacCONKEY AGAR

Page 86: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MANNITOL SALT AGAR

Page 87: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ISOLATING PURE CULTURE

KOCH AND HIS PROCEDURES

Page 88: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

KOCH’S POSTULATES

• ORGANISM SHOULD ALWAYS BE PRESENT IN ANIMALS WITH DISEASE

• NOT PRESENT IN ANIMALS THAT ARE HEALTHY

• MUST CULTIVATE ORGANISMS IN PURE CULTURE

• WHEN CULTURE INTRODUCED INTO HEALTHY ANIMAL SHOULD CAUSE DISEASE

• MUST BE REISOLATED FROM EXPERIMENTAL ANIMAL

Page 89: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PURE CULTURE TECHNIQUE

• SUCCESS DEPENDS ON HAVING ONLY ONE MICROBE IN CULTURE

• SOLID MEDIA ALLOWS FOR DEVELOPMENT OF SINGLE COLONIES

Page 90: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PETRI PLATES

Page 91: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

STREAK PLATE

• DEVELOPED BY KOCH

• ASEPTIC TECHNIQUE

Page 92: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

POUR PLATE METHOD

• SERIAL DILUTIONS INTO LIQUID AGAR

Page 93: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PRESERVATION OF MICROBES

• SUBCULTURING

• REFRIGERATION

• DESSICATION

• LYOPHILIZATION

Page 94: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENVIRONMENTAL FACTORS AND GROWTH

EFFECTS OF TEMPERATURE

Page 95: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CARDINAL TEMPERATURES

• MINIMUM TEMPERATURE

• MAXIMUM TEMPERATURE

• OPTIMAL TEMPERATURE

Page 96: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MAXIMUM TEMPERATURE

• REFLECTS DENATURING OF PROTEINS AND ENZYMES

Page 97: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MINIMUM TEMPERATURE

• MAYBE DUE TO LOSS OF FLUIDITY IN CELL MEMBRANE

Page 98: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TEMPERATURE

• EFFECTS ALL RELATIONSHIPS IN CELL

• PSYCHROPHILES• MESOPHILES• THERMOPHILES

Page 99: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PSYCHROPHILES• BEST AT 15

DEGREES C OR LOWER

Page 100: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PSYCHROTROPHS

• ARE ALSO MESOTROPHS BEST GROWTH AT 20-30 DEGREES C– CAN GROW SLOWLY

AT LOW TEMPERATURES

– TOLERATE RATHERE THAN BENEFIT FROM THEM

• SPOIL FOOD IN FRIDGE– LISTERIA

MONOCYTOGENES

Page 101: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MESOPHILES

• MOST MICROBES ARE MESOPHILES

• HUMAN PATHOGENS ARE

Page 102: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THERMOPHILES

• HEAT LOVERS• ABOVE 55

DEGREES C• CAN GROW IN

BOILING WATER 100 DEGREE C

Page 103: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HYPERTHERMOPHILES

• GROW AT 90 DEGREES C OR HIGHER

• SOME HAVE MAXIMA ABOVE 100 DEGREES C

• DO NOT GROW WELL BELOW 55

Page 104: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENVIRONMENTAL FACTORS AND GROWTH

ACIDITY AND ALKALINITY

Page 105: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PH AND MICROBIAL GROWTH

• MOST ORGANIMS HAVE PH RANGE

• MOST FALL WITHIN PH 5 - 9

• ACIDOPHILES• NEUTROPHILES• ALAKALOPHILES

Page 106: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ACIDOPHILES

• LOW PH OPTIMA

• FUNGI TEND TO BE MORE ACID TOLERANT THAN BACTERIA

• OBLIGATE ACIDOPHILIC BACTERIA THIOBACILLUS SULFOLOBUS THERMOPLASMA

Page 107: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

IMPORTANCE OF HYDROGEN IONS TO CELL

MEMBRANE STABILITY• IN NEUTRAL PH CELL MEMBRANE

DISINTEGRATES

• CELL LYSES

Page 108: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ALKALIPHILES

• HIGH PH OPTIMA FOR GROWTH

• SODA LAKES & HIGH CARBONATE SOILS

• SOME ARE ALSO HALOPHILES

Page 109: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NEUTROPHILES

• MAJORITY OF MICROBES

• PH 6 - 8

Page 110: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HOW TO LIVE IN HIGH AND LOW PH ENVIRONMENTS

• INSIDE OF CELL MUST BE AT PH NEAR 7

• MEMBRANE MAY BE IMPERMEABLE TO H+ IONS

• MAY EXCHANGE IONS ACROSS MEMBRANE

• CELL WILL MOVE H+ ACROSS MEMBRANE TO KEEP PH STABLE

Page 111: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MAINTAINING PH IN THE LAB

• BUFFERS

• WORK OVER NARROW PH RANGE

Page 112: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENVIRONMENTAL FACTORS AND GROWTH

WATER AVAILABILTY

Page 113: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OSMOSIS

• HIGH CONCENTRATION TO LOW CONCENTRATION

• ACROSS CELL MEMBRANE

• http://www.colorado.edu/eeb/web_resources/osmosis/

• http://zoology.okstate.edu/zoo_lrc/biol1114/tutorials/Flash/Osmosis_Animation.htm

Page 114: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

POSITIVE WATER BALANCE

• WATER USUALLY DIFFUSES INTO CELLS– CAUSING LYSIS OR TURGOR PRESSURE

Page 115: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NEGATIVE WATER BALANCE

• WATER WILL MOVE OUT OF THE CELL

• CAUSING CRENATION OR PLASMOLYSIS

Page 116: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OSMOTIC EFFECTS IN HIGH SALT ENVIRNOMENTS

• SEA WATER --3% NA CL

Page 117: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HALOPHILES

• MILD HALOPHILES 1-6%

• MODERATE HALOPHILES 6-15%

• EXTREME HALOPHILES 15-30%

• HALOTOLERANT CAN TOLERATE BUT GROW BEST WITHOUT

Page 118: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EFFECTS OF HIGH SUGAR ENVIRONMENTS

• OSMOPHILES

Page 119: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EFFECTS OF LOW WATER (DRY) ENVIRONMENTS

• XEROPHILES

Page 120: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HOW DO MICROBES GROW IN AREAS WITH LOW WATER

• COMPATIBLE SOLUTES

• PROLINE

• BETAINE

• GLYCEROL

Page 121: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENVIRONMENTAL FACTORS AND GROWTH

OXYGEN

Page 122: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TYPES OF MICROBES

• AEROBES

• MICROAEROPHILES

• FACULATIVE ANAEROBES OR AEROBES

• AEROTOLERANT ANAEROBES

• OBLIGATE ANAEROBES

Page 123: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TOXIC FORMS OF OXYGEN

• SINGLET OXYGEN 1O2

• SUPEROXIDE ANION 1O2-

• HYDROGEN PEROXIDE H2O2

• HYDROXYL RADICAL ·OH

• ALL ARE BYPRODUCTS OF RESPIRATION

Page 124: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SINGLET OXYGEN

• NORMAL MOLECULAR OXYGEN

• AT HIGHER ENERGY STATE• EXTREMELY REACTIVE

Page 125: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SUPEROXIDE ANION

• O2-

• HIGHLY REACTIVE• OXIDIZES ANY ORGANIC MOLECULE

Page 126: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PEROXIDES

• CAN DAMAGE CELL COMPONENTS• NOT AS TOXIC AS OTHERS

Page 127: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HYDROXYL RADICAL

• OXIDIZES ORGANIC SUBSTANCES• TRANSIENT• NOT A LOT MADE UNLESS EXPOSED TO IONIZING

RADIATION• SMALL AMOUNTS CAN BE MADE FROM

HYDROGEN PEROXIDE

Page 128: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENZYMES THAT DESTROY TOXIC OXYGEN PRODUCTS

• CATALASE

• PEROXIDASE

• SUPEROXIDE DISMUTASE

Page 129: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ANAEROBIC MICROBES

• FREQUENTLY LACK MEANS TO DETOXIFY OXYGEN BY PRODUCTS

Page 130: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ENVIRONMENTAL FACTORS AND GROWTH

PRESSURE

Page 131: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PRESSURE RELATIONSHIPS

• MOST ORGANISMS LIVE AT 1 ATMOSPHERE PRESSURE

• BAROTLERANT• BAROPHILIC

Page 132: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIALGROWTH

Page 133: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL GROWTH

GROWTH OF POPULATIONS NOT INDIVIDUALS

Page 134: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DOUBLING TIME

• GENERATION TIME

• DEPENDS ON SPECIES

• DEPENDS ON GROWTH CHARACTERISTICS

• TELLS HOW FAST POPULATION IS GROWING

Page 135: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THE WAY WE GROW

• ENLARGE AND DIVIDE WHEN DOUBLED IN SIZE

• BINARY FISSION

• BUDDING

• BINARY FISSION AND MITOSIS

• MITOSIS AND CYTOKINESIS

Page 136: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EUKARYOTIC CELL DIVISION

• GO PHASE

• G1 PHASE

• S PHASE

• G2 PHASE

• M PHASEC PHASE

Page 137: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GO PHASE

• PRIMARY GROWTH PHASE OF CELL

• ENLARGEMENT

Page 138: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

G1 PHASE

• CELL PREPARES FOR DNA REPLICATION

• PRODUCES ENZYMES

• PRODUCES NUCLEOTIDES

Page 139: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

S PHASE

• SYNTHESIS PHASE• REPLICATION OF

GENOME OCCURS

Page 140: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

G2 PHASE

• PRODUCES ORGANELLES FOR M PHASE

• STOCKPILES VITAL CELLULAR PRODUCTS

• CHROMOSOME BEGIN CONDENSING

Page 141: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

M PHASE

• MITOSIS PHASE

• DIVIDES THE NUCLEUS INTO TWO DAUGHTER NUCLEI

• PROPHASE

• METAPHASE

• ANAPHASE

• TELOPHASE

Page 142: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PROPHASE

Page 143: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

METAPHASE

Page 144: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ANAPHASE

Page 145: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TELOPHASE

Page 146: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

C PHASE

• CYTOKINESIS PHASE

• DIVISION OF CYTOPLASM AND ORGANELLES INTO TWO DAUGHTER CELLS

Page 147: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CYTOKINESIS

Page 148: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BACTERIAL CELL DIVISION

BUDDING

BINARY FISSION

Page 149: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BUDDING

• YEAST LIKE PROCESS

• But no mitosis occurs

Page 150: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BINARY FISSION

• CHROMOSOMES DO NOT SHUT DOWN DURING DIVISION

• CELL MEMBRANE REPLACES MITOTIC SPINDLE

• PRODUCES TWO NEARLY EQUAL SIZED CELLS

Page 151: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

http://www.emc.maricopa.edu/faculty/farabee/BIOBK/BioBookDiversity_2.html

Page 152: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PROCESSES INVOLVED

• CELL ELONGATION

• DNA REPLICATION

• CELL DIVISION

Page 153: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CELL ELONGATION

Page 154: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GRAM NEGATIVE BACTERIA

Page 155: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GRAM POSITIVE BACTERIA

Page 156: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DNA REPLICATION

• TIME TABLE CAN VARY

• MAY HAVE MULTIPLE REPLICATION FORKS

• MAY LEAD TO MULTIPLE CHROMOSOMES

Page 157: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CELL DIVISION

• USUALLY BEGINS AS INVAGINATION

• USUALLY AUTOLYSIS TO FORM TWO CELLS

• GET VARIETY OF ARRANGEMENTS

Page 158: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GRAM NEGATIVE BACTERIA

Page 159: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PLANES OF CELL DIVISION

Page 160: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

VIABLE NONCULTURABLE CELLS

• HAVE ACTIVE METABOLISM

• CAN’T BE GROWN ON CONVENTIAL MEDIA

• VIBRIO CHOLERAE, LEGIONELLA PNEUMONIAE

Page 161: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EXPONENTIAL GROWTH

• POPULATION NUMBERS INCREASE BY A FACTOR OF TWO

Page 162: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TYPES OF GROWTH

SYNCHRONOUS VS ASYNCHRONOUS

Page 163: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GROWTH PHASES

• LAG PHASE• LOG PHASE• STATIONARY

PHASE• DEATH PHASE

Page 164: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HOW DO WE KNOW A CELL IS DEAD

• CANNOT CONTINUE CELLULAR REPAIR

• CANNOT REINITIATE GROWTH WHEN INTRODUCED TO NEW MEDIA

Page 165: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

LABORATORY CULTURE METHODS

BATCH VS CONTINUOUS CULTURE

Page 166: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BATCH CULTURE

• USUALLY TYPE OF BACTERIAL GROWTH

• SHOWS NORMAL GROWTH CURVE

Page 167: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CONTINUOUS CULTURE

• CHEMOSTAT

Page 168: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

COLONY GROWTH

• FORMS FROM SINGLE CELL

• DIFFERENT PHASES OF GROWTH IN DIFFERENT PARTS OF COLONY

Page 169: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MEASURING MICROBIAL GROWTH

DIRECT VS INDIRECT

VIABLE VS TOTAL

Page 170: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

INDIRECT MEASUREMENTS

• MEASURE PROPERTIES OF POPULATION

• TURBIDITY

• DRY WEIGHT

• METABOLIC ACTIVITY

Page 171: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DIRECT MEASUREMENTS

• DIRECT MICROSCOPIC COUNT

• ELECTRONIC COUNT

• PLATE COUNT

• MOST PROBABLE NUMBER

Page 172: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

VIABLE COUNT

• COUNTS LIVING CELLS

• PLATE COUNTS

• MOST PROBABLE NUMBER

• METABOLIC ACTIVITY

• FILTRATION

Page 173: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TOTAL COUNT

• TURBIDITY

• DRY WEIGHT

• DIRECT MICROSCOPIC COUNT

• DIRECT ELECTRONIC COUNT

Page 174: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TURBIDITY

• NUMBER IS PROPORTIONAL TO WEIGHT OF A SAMPLE

• SPECTROPHOTOMETER

Page 175: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

USE OF THE SPECTROPHOTOMETER

• ESTIMATES MASS OF DENSE CULTURES

• CHARTS GROWTH COMPARED TO STANDARD GROWTH CURVE

Page 176: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

• ADVANTAGES|

RAPIDITY

REPRODUCIBLE

• DISADAVANTAGES

CAN BE USED ONLY ON DENSE CULTURES

DOES NOT DISTINGUISH BETWEEN LIVING AND DEAD CELLS

CAN NOT BE USED ON CELLS THAT AGGREGATE

NEED STANDARD CURVE

Page 177: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRY WEIGHT

• CENTRIFUGATION OR FILTRATION

• DRYING IN OVEN AT 105 DEGREES C FOR 24 HOURS

Page 178: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

• ADVANTAGES

USED TO MAKE STANDARD CURVE FOR MEASURING CELL MASS

ACCURATE

REPRODUCIBLE

DISADVANTAGES

TIME CONSUMING

TEDIOUS

SAMPLE MUST CONTAIN MORETHAN 10 MILLION CELLS

Page 179: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

METABOLIC ACTIVITY

• RATE OF METABOLITE PRODUCTION

• UTILIZATION OF SUBSTRATE

• REDUCTION OF DYES

Page 180: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ADVANTAGES

CAN BE USED WITH COMPLEX MEDIA SUCH AS MILK OR SOIL

NO INSTRUMENTS REQUIRED

DISADVANTAGES

INDIRECT MEASURMENT

DOES NOT GIVE AN ACCURATE MEASUREMENT

TIME CONSUMING

Page 181: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DIRECT COUNT

• PETROFF HAUSER COUNTING CHAMBER

• COULTER COUNTER

Page 182: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PETROFF HAUSSER COUNTING CHAMBER

Page 183: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

COULTER COUNTER

Page 184: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROSCOPIC VS ELECTRONIC COUNTS

• USED IN DIFFERENT SITUATIONS

Page 185: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROSCOPIC COUNTS

• ADVANTAGES– NO EXPENSIVE

EQUIPMENT

– ONLY WAY TO COUNT IF SAMPLE CONTAINS FOREIGN MATERIALS

• SLOW• TEDIOUS• NOT USEFUL FOR

DILUTE CULTURES

Page 186: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ELECTRONIC COUNT

• ADVANTAGES– RAPID

– ACCURATE IF CELLS ONLY ARE PRESENT

• EXPENSIVE• CAN’T USE IF

FOREIGN PARTICLES ARE PRESENT

Page 187: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PLATE COUNT

• POUR PLATE

• SERIAL DILUTIONS

• COUNT PLATES BETWEEN 3O AND 300 COLONIES

Page 188: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

• ADVANTAGES– EXTREMELY

SENSITIVE

– DOES NOT NEED COMPLICATED EQUIPMENT

• DISADVANTAGES– SAMPLING ERRORS

– TIME CONSUMING

– TEDIOUS

– LARGE NUMBERS MUST BE COUNTED TO REDUCE SAMPLING ERROR

Page 189: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MOST PROBABLE NUMBER

• A SINGLE LIVE CELL CAN GIVE RISE TO A TURBID CULTURE

• SERIAL DILUTIONS• USES STATISTICAL

TABLE

Page 190: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

• ADVANTAGES– ALLOW COUNTS OF

MICROBES THAT ARE DIFFICULT TO GROW ON SOLID MEDIA

– CAN BE USED TO COUNT CELLS IN MIXED LIQUID CULTURE

• DISADVANTAGE– TIME CONSUMING

– TEDIOUS

Page 191: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FILTRATION

• PREPARATION FOR OTHER METHODS

Page 192: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MICROBIAL DEATH

Page 193: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TERMS

• STERILIZATION

• DISINFECTION

• SANITATION

• DECONTAMINATION

• ANTISEPSIS

• MICROBIOSTATIC

• MICROBIOCIDAL

Page 194: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

RATE OF MICROBIAL DEATH

• EXPONENTIAL DEATH

• ASYNCHRONOUS

• CAN BE CALCULATED

Page 195: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DECIMAL REDUCTION TIME

• D VALUE

• TIME IT TAKES TO KILL 90 PERCENT OF POPULATION

Page 196: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FACTORS THAT AFFECT D VALUE

• TEMPERATURE

• TYPE OF MICROBE

• PHASE OF GROWTH

• PRESENCE OF OTHER SUBSTANCES

Page 197: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PROBABILITY OF STERIZATION

• 90 PERCENT OF POPULATION DIES

• EVENTUALLY WE HAVE THE PROBABILITY OF NO MICROBES IN THE POPULATION

Page 198: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DESIGNING A STERILIZATION PROGRAM

• D VALUE OF TREATMENT

• NUMBER OF CELLS PRESENT

• DEGREE OF CERTAINTY OF STERILITY DESIRED

Page 199: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THERMAL DEATH POINT

• TDP

• LOWEST TEMPERATURE NEEDED TO KILL ALL MICROBES IN A LIQUID SUSPENSION IN 10 MINUTES

Page 200: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THERMAL DEATH TIME

• TDT

• MINIMAL TIME TO KILL ALL MICROBES IN A LIQUID SUSPENSION AT A GIVEN TEMPERATURE

Page 201: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PHYSICAL CONTROLS OF MICROBIAL GROWTH

• HEAT

• COLD

• RADIATION

• FILTRATION

• DRYING

• OSMOTIC STRENGTH

Page 202: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HEAT

• INEXPENSIVE

• EFFECTIVE

• DRY HEAT

• MOIST HEAT

Page 203: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

AUTOCLAVE

• USES STEAM TO STERILZIE

• MAINTAINS PRESSURE AT 103 kPa (15 PSI)

• KILLS ALL BACTERIA, VIRUSES, FUNGI AND ENDOSPORES– EXCEPT STRAIN 121 AND PRIONS– DOES NOT DESTROY ENDOTOXINS

Page 204: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PASTEURIZATION

• DISINFECTION PROCESS

• MILK, WINES, BEERS……

Page 205: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

COLD

• BY ITSELF DOES NOT KILL

• COLD SHOCK ONLY EXCEPTION

• MICROBIOSTATIC

Page 206: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FREEZING

• DOES KILL MOST BACTERIA

• DOES KILL EUKARYOTES

Page 207: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

RADIATION

• ELECTROMAGNETIC RADIATION

• ULTRAVIOLET RADIATION

• IONIZING RADIATION

Page 208: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

UV RADIATION

• WAVELENGTH OF 10 TO 400 nm

• 265 nm UV LIGHT MOST LETHAL

• GERMICIDAL LIGHTS

• 253.7 nm LIGHT

Page 209: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

IONIZING RADIATION

• X-RAYS• GAMMA RAYS• CAUSE CHAIN OF

IONIZATIONS• KILL CELLS

Page 210: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FILTRATION

• MICROBES EXCEPT VIRUSES REMOVED

• NOT STERIZATION

• USED FOR HEAT

• LABILE MEDIA

Page 211: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRYING

• EVAPORATION

• SUBLIMATION

Page 212: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EVAPORATION

• REMOVAL OF WATER

• USED FOR FOOD

• SELDOM USED IN

• MICRO LAB

Page 213: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

LYOPHILIZATION

• SUBLIMATION• DIRECT

CONVERSION FORM SOLID STATE TO GASEOUS STATE

• VACUUM

Page 214: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OSMOTIC STRENGTH

• USED TO PRESERVE FOOD

• SUGAR• SALT

Page 215: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHEMICAL CONTROL OF MICROBES

Page 216: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TERMS

• CHEMOTHERAPEUTIC AGENTS

• GERMICIDES

• GERMISTATS

• DISINFECTANTS

• ANTISEPTICS

Page 217: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTING A GERMICIDE

• HIGH ACTIVITY GERMICIDE

• INTERMEDIATE ACTIVITY GERMICIDE

• LOW ACTIVITY GERMICIDE

Page 218: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTING A GERMICIDE

• HIGH ACTIVITY GERMICIDE

• INTERMEDIATE ACTIVITY GERMICIDE

• LOW ACTIVITY GERMICIDE

Page 219: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TESTING GERMICIDES

• SERIAL DILUTIONS

• PHENOL COEFFICIENT

• PAPER DISC METHOD

• USE DILUTION TEST

Page 220: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TYPES OF GERMICIDES

• PHENOLS , PHENOLICS & BISPHENOLS

• BIGUANIDES

• ALCOHOLS

• HALOGENS AND PEROXYGENS

• HEAVY METALS

• SURFACTANTS

• ALKYLATING AGENTS

Page 221: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PHENOLS, PHENOLICS & BISPHENOLS

• PHENOL– CARBOLIC ACID

• PHENYLPHENOL• HEXACHLOROPHENE• INACTIVATE VITAL CELLULAR

PROTEINS• PHENOLICS DISRUPT CELL

MEMBRANES

Page 222: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BIGUANIDES

• CHLORHEXIDINE

Page 223: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ALCOHOLS

• DISRUPT LIPIDS IN CELL MEMBRANES

• DISRUPT PROTEINS• ETHANOL• ISOPROPANOL

Page 224: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HALOGENS

• OXIDIZING AGENTS• INACTIVATE ENZYMES• ATTACK SULFHYDRYL

GROUPS• IODINE• CHLORINE

Page 225: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PEROXYGENS

OZONE, HYDROGEN PEROXIDE AND PERACETIC ACID

Page 226: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

OZONE

• HIGHLY REACTIVE• SUPPLEMENTS

CHLORINE IN WATER TREATMENT

Page 227: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HYDROGEN PEROXIDE

• OXIDIZING AGENT• WORKS LIKE

HALOGENS• 3% AS ANTISEPTIC

OR DISINFECTANT

Page 228: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PERACETIC ACID

• EFFECTIVE AGAINST SPORES AND VIRUSES

• FOOD AND MEDICAL INSTRUMENT USES

Page 229: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HEAVY METALS

• MERCURY

• SILVER

• MERCURIC CHLORIDE

• MERTHIOLATE AND MERCUROCHROME

• COLLOIDAL SILVER AND SILVER SALTS

Page 230: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SURFACTANTS

• HYROPHILIC AND HYDROPHOBIC PORTIONS

• FORM EMULSIONS

• QUATERNARY AMMONIUM SALTS

• ANIONIC SURFACTANTS

Page 231: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ALKYLATING AGENTS

• FORMALDEHYDE--FORMALIN

• ETHYLENE OXIDE

• GLUTARALDEHYDE

• ATTACH SHORT CARBON CHAINS INTO ENZYMES

• INACTIVATES THEM AND CELL DIES

Page 232: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FORMALDEHYDE

Page 233: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GLUTARALDEHYDE

Page 234: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ETHYLENE OXIDE

Page 235: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

Microbial Characteristics and Microbial Control

Page 236: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHEMOTHERAPEUTIC AGENTS

Page 237: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

INTERNET RESOURCES

• http://gsbs.utmb.edu/microbook/ch011.htm

Page 238: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ANTIMICROBIAL CHEMOTHERAPY

THE USE OF CHEMICALS TO CONTROL OR PREVENT

INFECTION

Page 239: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHEMOTHERAPY

THE USE OF CHEMICALS TO TREAT, RELIEVE OR PREVENT

DISEASE

Page 240: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SOURCES OF ANTIBACTERIAL AGENTS

• http://helios.bto.ed.ac.uk/bto/microbes/penicill.htm

• BACTERIA– STREPTOMYCES– BACILLUS

• FUNGI– PENICILLIUM– CEPHALOSPORIUM

Page 241: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SCOPE OF ANTIMICROBIAL ACTION

• NARROW SPECTRUM

• BROAD SPECTRUM

Page 242: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

INTERACTIONS BETWEEN HOST, MICROBE, AND DRUG• DRUG ADMINISTRATION

• DRUG ABSORPTION AND DISTRIBUTION

• DESTRUCTION OR INHIBITION OF MICROBE

• DRUG INACTIVATION BY HOST

Page 243: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUG ADMINISTRATION

• PER OS

• INTRAMUSCULAR INJECTION

• INTRAVENOUSLY

• TOPICAL

• INJECTION INTO BODY CAVITY OR SUBCUTANEOUSLY

Page 244: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

INTERACTIONS BETWEEN HOST, MICROBE, AND DRUG• DRUG ADMINISTRATION

• DRUG ABSORPTION AND DISTRIBUTION

• DESTRUCTION OR INHIBITION OF MICROBE

• DRUG INACTIVATION BY HOST

Page 245: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUG ELIMINATION

• SOME DRUGS METABOLIZED IN LIVER

• MOST ELIMINATED BY KIDNEYS

• PROBENECID SLOWS RATE OF EXCRETION BY KIDNEYS

• SOME DRUGS EXCRETED BY LIVER IN BILE AND IN FECES

Page 246: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MECHANISMS OF DRUG ACTION

INTERACTION BETWEEN DRUG AND MICROBE

Page 247: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SELECTIVE TOXICITY

• INHIBIT OR KILL MICROBES

• HAVE LITTLE IF ANY EFFECT ON HOST TISSUES

Page 248: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MECHANISMS OF DRUG ACTION

• INHIBIT CELL WALL SYNTHESIS

• INHIBIT NUCLEIC ACID SYNTHESIS

• INTERFERE WITH PROTEIN SYNTHESIS

• INTERFERE WITH THE FUNCTION OF THE CELL MEMBRANE

• ANTIMETABOLITE

• INACTIVATE ENZYMES

Page 249: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ANTIMICROBIAL DRUGS THAT AFFECT THE BACTERIAL CELL

WALL

• PEPTIDOGLYCAN TARGET

• CELL WILL LYSE WITHOUT IT

• PENICILLINS

• CEPHALOSPORINS

• VANCOMYCIN

• BACITRACIN

Page 250: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

PENICILLIN

Page 251: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CEPHALOSPORIN

Page 252: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

VANCOMYCIN

Page 253: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

BACITRACIN

Page 254: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ISONIAZID

            

Page 255: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ETHAMBUTOL

              

              

Page 256: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUGS THAT DISRUPT THE CELL MEMBRANE

• DIE FROM METABOLIC INSUFFICIENCY

• LYSIS

• POLYMIXINS

• POLYENES

• IMIDAZOLES

• ACTS ON LIPIDS IN MEMBRANES

• NOT AS GOOD SELECTIVE TOXICITY

Page 257: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

POLYMIXINS

Page 258: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NYSTATIN

Page 259: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

AMPHOTERCIN B

Page 260: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

IMIDAZOLES

. .

Page 261: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUGS THAT INHIBIT PROTEIN SYNTHESIS

• AFFECT 70s RIBOSOME

• 30s SUBUNIT----ie. AMINOGLYCOSIDES

TETRACYCLINE

• 50s SUBUNIT----ie. CHLORAMPHENICOL

ERYTHROMYCIN

• BACTERICIDAL--AMINOGLYCOSIDES

• BACTERIOSTATIC--ALL OTHER GROUPS

Page 262: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

STREPTOMYCIN

Page 263: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ERYTHROMYCIN

Page 264: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TETRACYCLINES

Page 265: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHLORAMPHENICOL

Page 266: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUGS THAT INHIBIT NUCLEIC ACID SYNTHESIS

• LONG METABOLIC PATHWAY

• TOPOISOMERASES--QUINOLONES

• POLYMERASES—RIFAMPIN

• FLUCYTOSINE

Page 267: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

RIFAMIPIN

Page 268: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

QUNINOLONES

                           

 

                             

  

Page 269: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FLUCYTOSINE

Page 270: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUGS THAT ARE ANTIMETABOLITES

• ANTIMETABOLITES• INHIBITION OF

FOLIC ACID SYNTHESIS

• SULFONAMIDES• FLUCYTOSINE

Page 271: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

ANTIVIRAL DRUGS

• ACYCLOVIR

• AMANTIDINE

Page 272: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUGS THAT INACTIVATE ENZYMES

• PENICILLIN & CEPHALOSPORINS

• VANCOMYCIN

Page 273: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EXAMPLES OF SIDEFFECTS

• TOXICITY

• HYPERSENSITIVITIES

• DISRUPTION OF NORMAL FLORA

Page 274: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TOXICITY

SOME DRUGS HAVE TOXIC EFFECTS ON PATIENTS

Page 275: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HYPERSENSITIVITIES

• SOME ALLERGENS

• SOME HAPTENS

• MILD TO SERVERE SKIN RASHES

• ANAPHYLACTIC SHOCK

Page 276: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DISRUPTION OF NORMAL FLORA

• ESPECIALLY BROAD SPECTRUM

• SKIN, DIGESTIVE, UPPER RESPIRATORY, UROGENITAL TRACT

• CANDIDA

• SUPERINFECTION

• LACTINEX IS GIVEN TO COUNTERACT

Page 277: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUG RESISTANCE

• ADAPTIVE RESPONSE OF MICROORGANIMS

• RESULT OF DRUG THERAPY, GENETIC VARIABILITY AND NATURAL SELECTION

Page 278: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

REASONS FOR SUPERINFECTIONS

• OFTEN PATIENTS ARE DEBILITATED AND HAVE LESS RESISTANCE

• THE CARE ENVIRONMENT OFTEN HAS DRUG RESISTANT ORGANISMS PRESENT

Page 279: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DRUG RESISTANCE• GENETIC MECHANISMS• NONGENETIC MECHANISMS• http://images.google.com/imgres?imgurl=http://

microvet.arizona.edu/Courses/MIC438/decker/AntibioticRes/20-T02_Activity.jpg&imgrefurl=http://microvet.arizona.edu/Courses/MIC438/decker/AntibioticRes/AntibioticResistance.html&h=361&w=800&sz=55&tbnid=GLwmlTgTlJqRoM:&tbnh=64&tbnw=142&hl=en&start=7&prev=/images%3Fq%3Dspectrum%2Bof%2Bantibiotic%2Baction%26svnum%3D10%26hl%3Den%26lr%3D%26sa%3DG

• http://images.google.com/imgres?imgurl=http://www.wiley.com/college/pratt/0471393878/student/activities/bacterial_drug_resistance/resistance_transfer_web.jpg&imgrefurl=http://www.wiley.com/college/pratt/0471393878/student/activities/bacterial_drug_resistance/&h=285&w=400&sz=27&tbnid=mH0fjM9zuN7zXM:&tbnh=85&tbnw=120&hl=en&start=9&prev=/images%3Fq%3DDRUG%2BRESISTANCE%26svnum%3D10%26hl%3Den%26lr%3D%26sa%3DG

Page 280: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NONGENETIC MECHANISMS

• EVASION

• L FORMS

Page 281: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GENETIC MECHANISMS

Page 282: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DEVELOPMENT OF DRUG RESISTANCE

• MUTATIONS

• TRANSFORMATION

• TRANSDUCTION

• CONJUGATION

• RESISTANCE FACTORS

• http://www.methylgene.com/images/gestion/BetaLactamase.swf

Page 283: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MUTATIONS

Page 284: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CONJUGATION

Page 285: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

TRANSFORMATION

Page 286: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

GENERALIZED TRANSDUCTION

Page 287: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SPECIALIZED TRANSDUCTION

Page 288: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SPECIFIC MECHANISMS• SYNTHESIS OF ENZYMES THAT INACTIVATE

DRUG• DECREASE IN CELL MEMBRANE

PERMEABILITY AND UPTAKE• CHANGE IN NUMBER OF AFFINITY OF

RECEPTOR SITES• MODIFICATION OF METABOLIC PATHWAYS• DORMANCY• L FORMS

Page 289: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MECHANISMS OF DRUG INACTIVATION—ENZYMES

• ENZYMES THAT ALTER DRUG STRUCTURE

• BETA-LACTAMASES

• PENICILLINASE

• CEPAHLOSPORINASE

• STAPHYLOCOCCUS AUREUS AND NESSERIA GONORRHOEAE

• SOME GRAM NEGATIVE BACTERIA

Page 290: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

MECHANISMS OF DRUG INACTIVATION--ADDITION OF

FUNCTIONAL GROUPS• AMINOGLYCOSIDES

• CHLORAMPHENICOL

• PREVENTION OF ATTACHMENT TO BACTERIAL RIBOSOME

Page 291: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DECREASED PERMEABILITY OF CELL TO DRUG

• GRAM NEGATIVE OUTER MEMBRANE

• PUMP THE DRUG BACK OUT OF CELL

Page 292: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHANGE DRUG RECEPTORS

• ALTER NATURE OF DRUG’S TARGET

• ALTER PROTEINS --RIFAMPIN AND STREPTOMYCIN

• ALTER 50s RIBOSOME--CLINDAMYCIN, LINCOMYCIN, ERYTHROMYCIN

• CHANGE BINDING SITE IN CELL WALL-PENICILLIN & METHAICILLIN

• DECREASE SYNTHESIS OF ERGOSTEROL IN FUNGAL CELL WALL--AMPHOTERCIN B

Page 293: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CHANGE METABOLIC PATHWAYS

• DEVELOP ALTERNATE PATHWAY OR ENZYME

• SULFONAMIDE AND TRIMETHROPIM RESISTANCE

• SHUT DOWM PATHWAY

• FLUCYTOSINE

Page 294: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THE ROLE OF NATURAL SELECTION IN DRUG RESISTANCE

• OCCURS IN WHOLE POPULATION

• VARIATION IN POPULATION

• RESISTANT STRAINS MAY BE IN LOW NUMBERS

• IN PRESENCE OF ANTIBACTERIAL AGENT NON RESISTANT DIE

• RESISTANT FORMS INCREASE DUE TO REPRODUCTION

• http://www.geocities.com/Heartland/7547/antibios.html

Page 295: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FIRST, SECOND AND THIRD LINE DRUGS

Page 296: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

FIRST, SECOND AND THIRD GENERATION DRUGS

• DRUGS THAT ARE DERIVATIVES OF ONE ANOTHER

• MAY BE USED AS LINE DRUGS

Page 297: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

CROSS RESISTANCE

• RESISTANCE TO TWO OR MORE DRUGS

• BETA-LACTAMASE

Page 298: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NOSCOMIAL DRUG RESISTANT INFECTIONS

• SULFONAMIDES FIRST ANTIBACTERIAL AGENT

• FIRST TO HAVE RESISTANT SPECIES DEVELOP

• PENICILLIN NEXT ADVANCE

• AT FIRST 95+% OF ALL STAPH. AUREUS WERE SUSCEPTIBLE

• NOW 95+% OF ALL STAPH. AUREUS ARE RESISTANT

Page 299: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

EXAMPLES OF RESISTANT SPECIES

• STAPHYLOCOCCI

• GONOCOCCI

• SALMONELLA

• NEISSERIA

• PSEUDOMONAS

Page 300: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

NOSOCOMIAL INFECTIONS

• SICK PEOPLE FREQUENT HOSPITALS

• TEND TO BE MORE SEVERELY ILL

• HAVE LOWERED RESISTANCE TO DISEASE

• HOSPITALS USE LOTS OF ANTIBACTERIAL AGENTS

Page 301: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

HOW TO REDUCE ANTIBACTERIAL AGENTS THAT ARE RESISTANT NOSOCOMIAL

INFECTIONS• WASH YOUR HANDS

• LIMIT THE USE OF ANTIBACTERIAL AGENTS

• USE SENSITIVITY TESTS

• USE ANTIBACTERIAL AGENTS UNTIL ORGANISM IS COMPLETELY ERADICATED

• USE DRUG COMBINATIONS

Page 302: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DETERMINING MICROBIAL SENSITIVIES TO ANTIMICROBIAL

AGENTS• DISK DIFFUSION METHOD

• DILUTION METHOD

• SERUM KILLING POWER

• AUTOMATED METHODS

• http://www.lancet.co.za/assets/pdf/news/Antimicrobial_Susceptibility_Tests.pdf

Page 303: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DISK DIFFUSION METHOD

• KIRBY BAUER METHOD

• ZONES OF INHIBITION

• 24-48 HOURS• SENSITIVE• MODERATELY

SENSITIVE• RESISTANT

Page 304: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

DILUTION METHOD• STANDARDIZED

SHALLOW WELLS• SPECIMEN INTRODUCED

INTO BROTH AND DRUG• 16-20 HOURS• MINIMUM INHIBITORY

CONCENTRATION• MINIMUM

BACTERIOCIDAL CONCENTRATION

Page 305: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

SERUM KILLING POWER

• PATIENT’S SERUM• BACTERIAL

SUSPENSION• LOOK FOR

TURBIDITY

Page 306: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

INCREASING DRUG EFFECTIVENESS

Page 307: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THE IDEAL CEHMOTHERAPEUTIC AGENT

• SOLUBLE IN BODY FLUIDS

• SELECTIVE TOXICITY

• NOT EASILY ALTERED TO TOXICITY

• NONALLERGENIC

• STABILITY--ABILITY TO MAINTAIN CONSTANT THERAPEUTIC CONCENTRATION

Page 308: MICROBIAL NUTRITION, GROWTH, MEASUREMENT, AND CONTROL

THE IDEAL CHEMOTHERAPEUTIC AGENT

• FEW ORGANISMS ARE RESISTANT

• LONG SHELF LIFE

• REASONABLE COST