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SCT1
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SCT 1Integrative biology of organisms, mechanisms of interactions and
stress responses
units organization
scientists and their competences
Ph.D and their fundings
reception of trainee-researchers
scientifics projects supported by the department
incentive programs
partnership
bibliometrics
Assistant head of Dpt : Thierry CANDRESSE
SCT1
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SCT 1 : units organization in 2002
genomicsplatform
Versailles GrignonRennes
Angers
ColmarDijon
Poitou Charentes Clermont Lyon
Avignon
Antibes
Montpellier
Antilles
Toulouse
scale :
30 INRA and associated scientists
SCT 2
SCT 3
SCT 4
SCT 1
SCT1
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SCT 1 scientists (researchers & ingeniors) in ETP
32 % of
total SPE
SCT 1 :
116,1 ETP
INRA permanent scientists in
2002 : 362 ETP
except scientists outside SPE SCTs and outside SPE departmentETP = full time equivalent
100 scientists
29 % of
SPE total
SCT 1 :
112,1 ETP
INRA permanent scientists in
1998 : 390,3 ETP
70 % of
total SPE
SCT 1 :
50,8 ETP
permanent associated scientists in
1998 : 72,8 ETP
65 % of
total SPE
SCT 1 :
74,0 ETP
permanent associated scientists in
2002 : 113,8 ETP
74
50,8
116,1
112,1
-150 -100 -50 0 50 100
1998
2002
associated scientists (ETP)
INRA scientists (ETP)
SCT1
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SCT 1 stock and flow of scientists and academics
DR PR/PUPH CR MC IR IE total
INRA 1998 32 54 11 18 115
INRA 2002 37 55 12 15 119
others 1998 11 7 18 9 8 53
others 2002 12 12 16 36 1 6 83
-12-9-6-30369
1998 1999 2000 2001 2002
incomes outcomes
flow
-15
-10
-5
0
5
10
15
20
25
1998 1999 2000 2001 2002
incoming outgoing flowstock
in 2002
flow / stock
78 42 36 198 18 %
SCT1
INRA incoming 28
INRA outgoing 24
others incoming 50
other outgoing 18
INRA flow 4
others flow 32
total flow 36
stocks in 1998 and 2002flow from 1998 to 2002
consolidated flow 1998 - 2002 SCT1 INRA and others flow
SCT1 INRA flow
included incoming of new scientists by promotion (AI -> IE)
SCT1
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demographic repartition of INRA SCT 1 scientists
0
5
10
15
20
25
30
<30 30-34 35-39 40-44 45-49 50-54 55-59 >60
ingeniors
researchers
average age 44,4
2002
average age 43,4
0
5
10
15
20
25
30
<30 30-34 35-39 40-44 45-49 50-54 55-59 >60
1998
SCT1
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estimated number of retiring scientists in 2003 - 2007
0
5
10
15
20
25
2003 2004 2005 2006 2007
0
5
10
15
20
25
total
SCT 1
2003 2004 2005 2006 2007 totalstock 2002
outgoing/ stock
SCT 1 0 1 2 2 3 8 119 7 %
total 2 12 12 25 19 70 364 19 %
SCT1
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the competencesof scientists recruited from 1998 to 2000
year unit level thematics competence NAME
1998
Antibes 1064 CR2 determinants of pathogenicity molecular basis of pathogenicity in the oomycete Phytophthora V. COLAS
Colmar 1130 CR2molecular mechanisms involved in the vector-mediated transmission of bioaggressors
molecular interactions between luteovirus and specific receptors in Aphids P. SEDDAS
Montpellier 1063 DR2 rhizobial symbiosis (mutation from EA department)J.C. CLEYET
MAREL
Rennes 1099 CR2molecular mechanisms involved in the vector-mediated transmission of bioaggressors
molecular mechanisms of Aphid transmission and luterovirus evolution E. JACQUOT
1999
Antibes 1064 CR2 plant defence mechanisms identification of genes involved in plants response to nematodes B. FAVERY
Antibes 1064 CR1 plant defence mechanismsIdentification of induced genes in plants response to compatible
oomycetes H. KELLER
Clermont 203 CR2 genomics of bioagressors molecular targets of entomoxic peptides F. GRESSENT
Versailles 256 CR2 genomics of bioagressors Physiology et molecular genetics of phytopathogenic fungi M. VIAUD
IBP CR2 determinants of pathogenicitymolecular analysis of infection processus in hemibiotrophic
phytopathogen fungus R. LAUGE
Toulouse 441 DR2 rhizobial symbiosismolecular mechanisms of plant-microorganisms symbiotic
interactions in the rhizosphere. F.J. DE BRUIJN
2000
Antibes 1064 DR1 insect genomics and physiologyfonctionnal genomics and physiology of agronomically important
insects R. FEYEREISEN
Montpellier 1133 CR2 Symbiots and pathogens of insects fonctionnal genomics of bacteria pathogenic to insects S. GAUDRIAULT
Montpellier 385 CR2 plant defence mechanisms genomic approach of plant defence mechanisms J.B. MOREL
SCT1
menu outthe competences
of scientists recruited from 2001 - 2002
année unitécorp
sTHEMATIQUE PROFIL NOM
2001
Antibes 1112 IR2 insect genomics and physiologymanagment of a functional genomics platform for the development of lepidopterans genomics F. HILLIOU
GMPV 71 CR2 determinants of pathogenicity virulence of bacteria pathogenic to insects P. NEL
Montpellier 1231 CR1 insect genomics and physiology structure and functioning of the lepidopteran genome E. D'ALENCON
Rennes 1099 DR2molecular mechanisms involved in the vector-mediated transmission of bioaggressors
molecular and evolutive genetics of aphids D. TAGU
Toulouse 441 CR2 plant defence mechanisms molecular genetics of plant defence mechanisms T. KROJ
Toulouse 441 CR1 determinants of pathogenicity genetic analysis of the infection potential of rhizobium C. BRUAND
2002
Antibes 1112 IR2development of resources and approaches for high-throughput biology
bioinformatics for a functionnal genomics platform E. DELEURY
Montpellier 27 CR1molecular mechanisms involved in the vector-mediated transmission of bioaggressors
mechanisms and regulation of vector-mediated transmission of
viruses M. DRUCKER
Toulouse 441 CR2 determinants of pathogenicity functional genomics of bacteria pathogenic to plants N. PEETERS
Toulouse 441 IE2development of resources and approaches for high-throughput biology
bioinformatics for a genomic platform S. CARRERE
Toulouse 441 IR2development of resources and approaches for high-throughput biology
management of an integrated bioinformatic environnment for plants genomics J. GOUZY
temporary recruitment
SCT1
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Ph.Ds and supporting organizations
0
5
10
15
20
25
1994 1995 1996 1997 1998 1999 2000 2001 2002
foreign organisations
universities
agronomical universities
other schools
1994 1995 1996 1997 1998 1999 2000 2001 2002 SCT 1 total SPE total% of SPE
total
foreign organizations 1 2 1 1 5 13 38%
Universities 11 10 16 5 12 16 18 12 19 119 228 52%
agronomical Universities 1 1 5 3 4 3 1 18 55 33%
other engeneering schools 3 1 2 2 1 2 11 13 85%
SCT 1 total 12 13 20 11 17 20 24 14 22 153 309 50%
SPE total 18 26 45 39 33 35 45 29 39 309
% of SPE total 67% 50% 44% 28% 52% 57% 53% 48% 56% 50%
3%
78%
12%
7%
SCT1 Ph.Ds list
SCT1
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PhDs and their registering Universities
Paris areaRennes
Angers
Dijon
Bordeaux
Clermont Lyon
Montpellier
Antilles
Toulouse
foreign organizations
Tours
Marseille
Nancy
Strasbourg
Nice
scale : 20 Ph.Ds
SCT 1other SCT
Organization SCT 1 SPE total % of SPE
total
Univ Toulouse 3 35 38 92%
Univ Bourgogne 22 32 69%
Univ Bordeaux 2 10 19 53%
Univ Montpellier 2 11 18 61%
Univ Paris 6 6 18 33%
INA-PG 6 18 33%
ENSAM 6 17 35%
Univ Nice 3 16 19%
ENSAR 3 16 19%
Univ Rennes 1 3 14 21%
Univ Lyon 1 3 10 30%
Univ Paris 11 5 9 56%
Univ Angers 2 7 29%
INSA Lyon 7 7 100%
Univ Aix-marseille 3 1 5 20%
Univ Tours 2 5 40%
Univ Aix-marseille 2 2 4 50%
Univ Clermont-ferrand 2 4 50%
Univ Paris 13 3 4 75%
other agronomical schools 3 4 75%
other engeneering schools 4 6 67%
other Universities 8 20 40%
foreign organisations 5 13 38%
Grenoble
SCT1
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SCT 1 SPE total % of SPE total
INRA co-funded fellowships 32 62 52%
ASC et AERC 2 7 29%
ministerial or engineering schools fellowships 65 99 66%
engineer fellowships 5 5 100%
fellowship for foreign students 25 51 49%
employees 2 6 33%
industrial fellowships 4 15 27%
sponsorized by partnership 18 64 28%
total 153 309 50%
0
20
40
60
80
100
INRA co-funded
fellowships
ASC et AERC ministerial orengineering
schoolsfellowships
engineerfellowships
fellowship forforeign
students
employees industrialfellowships
sponsorized by
partenership
0
20
40
60
80
100
total SPE SCT 1
SCT1
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Ph.D fellowship supporting partners
0%
33%
19%7%
7%
24%
10% public researchinstitution
local administration
industry
agriculturaldevelopment
technical institutes
inbternational
european community
SCT1SPE total
% of SPE total
public research institution 9 0%
local administration 20 44 45%
industry 11 33 33%
agricultural development 4 12 33%
technical institutes 4 13 31%
international 14 29 48%
european community 6 13 46%
total 59 153 39%
SCT 1 fellowships partners
0
10
20
30
40
50
public researchinstitution
local administration industry agriculturaldevelopment
technical institutes international european community
0
10
20
30
40
50
SPE total SCT 1
SCT1
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areaINRA SPE supporting
other supports
SCT 1 total
% of SCT 1
SPE total % of SPE total
Africa 19 19 1% 61 31%
North Amarica 13 13 1% 78 17%
South America 26 54 80 6% 96 83%
Asia oceania 81 61 142 10% 267 53%
Europe (except France) 184 261 445 31% 498 89%
France 469 469 33% 587 80%
Mediterranean countries 123 57 180 13% 311 58%
PECO/NEI 49 32 81 6% 105 77%
SCT 1 total 475 953 1 428 2 001 71%
% of total 33 % 67 %
Europe (France included) 184 730 914 64% 1085 84%
0
100
200
300
400
500
600
Africa north America southAmerique
Asia oceania Europe(exceptFrance)
France Mediterraneancountries
Russian area
0
100
200
300
400
500
600
all SCT SCT 1 INRA SCT 1 others
months number
SCT1
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scientific projects supported by SPE
SCT 1
SPE total
% of SPE total
supported projects 66 137 48 %
non supported projects
104 245 42 %
SPE total 170 382 45 %
0
100
200
300
400
500
600
700
800
900
1998 1999 2000 2001 2002
K€
0
100
200
300
400
500
600
700
800
900
SPE total SCT1
projects selection projects funding (K€)
beginning year
1998 1999 2000 2001 2002 total
SCT1 577 511 431 521 137 2 177
SPE total 852 1 371 748 868 221 4 060
% of SPE total 68% 37% 58% 60% 62% 54%
SCT1 projects list
SCT1
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SCT 1 supported transversal projects
begining yearteam
projectsunit projects
inter departement
projects
inter organization
projectstotal
1998 8 5 1 14
1999 19 2 1 22
2000 4 2 5 1 12
2001 1 1 2 13 17
2002 1 1
Total 32 10 8 16 66
0
5
10
15
20
25
30
35
team department INRA outer
2002
2001
2000
1999
1998
projects number
SCT1
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funding of incentive programs (K€)
SCT 1SPE
Total % of SPE
total
1998 57 263 22%
1999 64 268 24%
2000 5 141 3%
2001 512 735 70%
2002 611 800 76%
Total 1 249 2 207 57%
name of the programfunding
K€
non alimentary valorisation of agricultural products 61
GDR Arabidopsis 22
Genomes and functions 26
Fundamental microbiology 64
Rhizobium meliloti 9
INRA CIRAD collaboration 26
Genetic resources organization (BRG) 53
structuring action "Quality of tomato 43
Medicago truncatula 153
Plant species sequencing projects 274
Other sequencing projects 459
Mycotoxins of cereals and forage plant 27
Biological resources center (CRB) 19
AGROPOLIS 12
SCT 1 total 1 2490
100
200
300
400
500
600
700
800
900
1998 1999 2000 2001 2002
K€
0
100
200
300
400
500
600
700
800
900
total SPE SCT1
SCT1
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financial resources from research contracts (K€)
1998 1999 2000 2001 2002 totalaverage /
ETP
SCT1 860 949 1 671 1 804 2 134 7 418 64,8
SCT total 2 985 3 399 3 909 4 670 4 743 19 706 56,11
% of SCT total 29% 28% 43% 39% 45% 38%
0,0
0,5
1,0
1,5
2,0
2,5
3,0
3,5
4,0
4,5
5,0
5,5
1998 1999 2000 2001 2002
M €
0
0,5
1
1,5
2
2,5
3
3,5
4
4,5
5
5,5
SPE total SCT1 except equipments and provisions of serviceETP : Full Time Equivalent
SCT1
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funding of research contracts and their origins (K€)
34%
32%
18%
4%
12%
international &europe
ministries andpublic researchinstitutionlocaladministration
agriculturalsector
industry
international
& europe
ministries and public research
institution
local administration
agricultural sector
industry
public funding
private funding
total
SCT1 2 507 2 379 1 356 282 891 6 242 1 173 7 415
SCT total 6 656 5 344 2 876 2 998 1 834 14 876 4 83219
708
% of SCT total 38% 45% 47% 9% 49% 42% 24% 38%
0
1
1
2
2
3
3
4
4
5
5
6
6
7
inte
rna
tio
na
l &e
uro
pe
min
istr
ies
an
dp
ub
licre
se
arc
hin
sti
tuti
on
loc
al
ad
min
istr
ati
on
ag
ric
ult
ura
ls
ec
tor
ind
us
try
M €
0
1
1
2
2
3
3
4
4
5
5
6
6
7
SPE total SCT116% of SCT 1 research contracts resources arise from the private sector
84% of SCT 1 research contracts resources arise from the public sector
SCT1
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SCT 1 publications : general data
SCT 1SPE total
% of SPE total
A rank journal number 208 430 48 %
publications in A rank journal 659 1 850 36 %
scientists (INRA and non INRA SPE 2002) ETP 190,1 454,4 42 %
ratio publications /scientists ETP/year 0,69 0,82
B rank journal number 16 150 11 %
publications in B rank journal 29 621 5 %
A + B journals 224 580 39 %
publications in A + B journals 688 2 471 28 %
scientists (INRA and non INRA SPE 2002) ETP 190,1 454,4 42 %
ratio publications /scientists ETP/year 0,72 1,090
500
1 000
1 500
2 000
A journal B journal
0
500
1000
1500
2000
SPE total SCT1
number of publications
A-rank journals are peer reviewed scientific journaB-rank journals are non reviewed plus vulgarisation journals
SCT1
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SCT 1 « A-rank » publications and their « Impact Factor » (IF)
Impact Factor
SCT 1SPE total
% of SPE total
> 5 124 150 83 %
3 à 5 160 273 59 %
2 à 3 90 323 29 %
1 à 2 162 506 27%
< à 1 109 557 32 %
NC 14 41 34 %
total 659 1 850 0
100
200
300
400
500
600
> 5 3 à 5 2 à 3 1 à 2 < à 1 NC
0
100
200
300
400
500
600
SPE total SCT 1
number of publications
among a list of 29 journals with IF ≥ 1, where 50% of SPE publications are found :
SCT 1total SPE
% of SPE total
journals number 26 29 90 %
number of publications in these journals 259 707 37 %
SCT1
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type «A » multi SCT publications
1 2 3 4
1 65
932 36 11
multi SCT publications involving SCT 1 73
SCT 1 publications 659
SCT 1 publications total 732
% multi SCT / total SCT publications 10 %
occurrences of multi SCT publications
co-publications of different SCT authors
SCT of author
1 2 3 4 totalSCT total
publicationsco-publications
%
SCT 1 publications 38 23 11 72 659 11%
co-publications with SCT 1 % 53 % 32 % 15 % 100 %
all SCT co-publications total 85 69 67 60 281 1 850 15%
SCT1
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type « A » publications authors
SCT 1 total SPE
A rank publications 659 1850
authors range number 1 to 28 1 to 28
all authors average number 5,1 4,9
one author (SPE) publications 17 59
intra SPE publications(all authors belonging SPE)
103 237
intra SPE publications % 16% 13%
SPE authors average number 2,27 2
average ratio SPE authors / all authors 45% 41%
SCT1
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the end
SCT 1Integrative biology of organisms, mechanisms of interactions
and stress responses
Assistant head of Dpt : Thierry CANDRESSE