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Mayo Foundation: Clinical Perspective on Comparable Data. By Peter L. Elkin, MD Director, Laboratory of Biomedical Informatics Department of Internal Medicine Mayo Clinic. Millions of Documents are Generated by Healthcare Organizations each Year - PowerPoint PPT Presentation
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© Copyright Mayo Foundation for Medical Education and Research 2004
Mayo Foundation: Clinical Perspective on Comparable Data
By Peter L. Elkin, MD
Director, Laboratory of Biomedical Informatics
Department of Internal Medicine
Mayo Clinic
© Copyright Mayo Foundation for Medical Education and Research 2004
Document ManagementThe Tip of the Iceberg
• Millions of Documents are Generated by Healthcare Organizations each Year
• All are lost with respect to retrieval purposes (Except by MR#)– Lost Opportunity to Learn about your practice– Lost Opportunity to Manage your practice
© Copyright Mayo Foundation for Medical Education and Research 2004
Document ManagementThe Tip of the Iceberg
• Other Applications– Linking Images to Patient Records– Linking the Literature to Patient Records– Aggregate Retrievals for Research– Cost Justification by Better Documentation (links
to Clinical Guidelines, Definitions, etc.)– Linking Documents to Web pages Dynamically
• Challenge is that this Linkage must be robust enough to characterize today’s practice of medicine
© Copyright Mayo Foundation for Medical Education and Research 2004
Clear Return on Investment
• Automated Vocabulary Management
• Better Asset Management
• Automated evaluation of records to see if they meet the E&M coding guidelines?
• Expert System to Maximize DRG reimbursement…..
• Decision Support (Patient Safety)
© Copyright Mayo Foundation for Medical Education and Research 2004
Granular Encoding
G u ide lin es E xp ert S yte m sC lin ica l R e m in d e rs
Practice
A g g reg a te R e trie va l P ro toco l E n ro lem e nt
R esearch
C D S S(e .g . D X p la in )
A d h oc T e ach in g F ilesIm ag ing
Education
G ranular Encoding of Patient P roblem s Vocabulary Serve r
© Copyright Mayo Foundation for Medical Education and Research 2004
Mayo Technology
• Concept Based Indexing– SNOMED-CT– ACE– ACD– Vocabulary Server– Comparable Data
© Copyright Mayo Foundation for Medical Education and Research 2004
System ArchitectureEnterprise Java Beans
© Copyright Mayo Foundation for Medical Education and Research 2004
Dell 2650 for File Server (Optional)o 2GBs of Main Memoryo Two (2) - 2.8GHz Processorso 5x73 GB diskso Additional disk expansion available (up to 1.5tb optional)
Sun Fire V210 forDatabase Engineo 2 - GHZ UltraSparc IIIio 4GB Main Memoryo 2- 36GB drives for OS and Sybase Installationo 12 - 73GB drives for DB and online DB backups
SAVS Hardware Architecture
Terminology DB (Static)Document Index DBIndex File Storage
indexed File Server(Optional)
Web/App Server RMIServer
Optional
Optional
Web Client
Dell 2650 for RMI engineo 6GBs of Main Memoryo Two (2) - 2.8GHz Processorso 5x73 GB diskso Additional disk expansion available (up to 1.5tb optional)
RMIServer(Optional)
Dell 2650 Web Servero 4GBs of Main Memoryo Two (2) - 2.8GHz Processorso 3x73 GB disks for OS & applications Optional
Optional
EMR
© Copyright Mayo Foundation for Medical Education and Research 2004
EMRRepository
TerminologyServer
Record EntryProcess
Record RetrievalProcess
Web ServerEnterprise
Java Bean Container
Map Text To Terminology
Handle Query andExplode Matches
Map Text To Terminology and
Store
Query
Query to Processorand Return
Intelligent Queryto Database
Transcribed Record
Record to Processorand Return
Processed Recordto Storage
EMRRepository
TerminologyServer
Record EntryProcess
Record RetrievalProcess
Web ServerEnterprise
Java Bean Container
Map Text To Terminology
Handle Query andExplode Matches
Map Text To Terminology and
Store
Query
Query to Processorand Return
Intelligent Queryto Database
Transcribed Record
Record to Processorand Return
Processed Recordto Storage
© Copyright Mayo Foundation for Medical Education and Research 2004
Terminology in Healthcare:
“The nomenclature is of as much importance in this department of inquiry, as weights and measures in the physical sciences, and should be settled without delay.” William Farr, 1839; Regarding the Cullenian system of 1785First Annual Report of the Registrar-Generalof Births,Deaths, and Marriages in England. London: 1839 p. 99.
© Copyright Mayo Foundation for Medical Education and Research 2004
“In attempting to arrive at the truth, I have applied everywhere
for information, but in scarcely an instance have I been able to obtain
hospital records fit for any purpose of comparison.”
- Florence Nightingale, 1893
© Copyright Mayo Foundation for Medical Education and Research 2004
Electronic Health Record
• Comparable Data– Granularity C/W the Practice
• Outcomes Research• Utilization Review• Managing the Financial Side of the Practice
– Controlled Medical Vocabulary• Maintenance• Coverage• Formal Definitions• Unambiguous (Within a Context)• Non-Redundant
– Ease of Data Acquisition
© Copyright Mayo Foundation for Medical Education and Research 2004
Current Large Vocabulary Efforts
• SNOMED-RT– SNOMED-DICOM Microglossary
• Clinical Terms v3 (Read Codes)
• SNOMED-CT
• UMLS
• NIC, NOC, NANDA
• NDF-RT
© Copyright Mayo Foundation for Medical Education and Research 2004
TOMMY G. THOMPSON, SECRETARY OF HEALTH AND
HUMAN SERVICES July 1, 2003
• I am very excited about the tremendous potential for information systems to improve the quality of health care, and I have been pushing everyone in the Department very hard to move forward as rapidly as possible.
• My first charge ……… is to develop incentives for all parts of the health care community to use SNOMED, the electronic medical records, and other standards as they are adopted. We want to see the integration of health information systems through to its logical conclusion.
• I challenge you to adopt and use interoperable electronic health records.
© Copyright Mayo Foundation for Medical Education and Research 2004
Placing a Stake in the Groundby Don Berwick, MD
Clinicians and Researchers need a comparable mechanism for accessing Medical Record Data.Let’s place that stake in the ground where we think it Really Ought To Be!!!
© Copyright Mayo Foundation for Medical Education and Research 2004
Interoperability
• Data Exchange Between and Among Computers and Computer Systems– Reliable– Complete– Accurate
• Interoperability Standards– HL7– ASTM– ISO
© Copyright Mayo Foundation for Medical Education and Research 2004
Statement:
• In Medicine, we will never be able to create a vocabulary, with all the terms that a clinician will want to record, having been pre-coordinated in the vocabulary.
• E.g. Cellulitis, Left foot, with Osteomyelitis of the 3rd Metatarsal.
© Copyright Mayo Foundation for Medical Education and Research 2004
Answer: Compositionality
• Unambiguous– The Composite Term and its formalism should be
specified in such a way as not to allow two or more interpretations of the term’s meaning.
• Non-Redundant– Normalization of Pre-Coordinated Terms– Normalization of Post-Coordinated Terms
© Copyright Mayo Foundation for Medical Education and Research 2004
Glossary:
• Atomic Concept:
• Example: Colon has a unique concept
identifier in SNOMED-CT and cannot be
represented by combining two or more other
codes from within the terminology.
© Copyright Mayo Foundation for Medical Education and Research 2004
Glossary:
• Pre-coordinated Concept:
• Example: Colon Cancer is non-atomic, however
it has a single unique identifier in SNOMED-CT,
which means to the SNOMED that it represents a
“single” concept.
© Copyright Mayo Foundation for Medical Education and Research 2004
Glossary:
• Post-coordinated Concepts:
• Example: The concept “Status-Post CABG” is
not a unique concept within the SNOMED-CT
Reference Terminology.
© Copyright Mayo Foundation for Medical Education and Research 2004
Glossary:
• Qualifier: A string which when added to a term changes the meaning of the term in a Temporal or Administrative sense. For example, “History of” or “Recurrent”.
• Modifier: A string which when added to a term changes the meaning of the term in a Clinical sense. For example, clinical stage or severity of illness.
• Ontology: An organization of concepts for which one can make a rational argument. Colloquially this term is used to describe a hierarchy constructed for a specific purpose. For example a hierarchy of Qualifiers would be a Qualifier Ontology.
• Canonical Term: A preferred atomic or pre-coordinated term for a particular medical concept.
© Copyright Mayo Foundation for Medical Education and Research 2004
Glossary:
• Content Normalization - When all the Pre-coordinated terms in the Vocabulary are mapped to the combinations of Atomic terms in the same Vocabulary, which can be said to be equivalent in meaning.
© Copyright Mayo Foundation for Medical Education and Research 2004
If We Build It, They Will ComeField of Dreams (Early 90’s)
• Standards– Vocabulary Structure
– Semantic Representation
– Formalism for Content Representation
– Formalism for Composition
– Formalism for Medical Knowledge Representation
– Reliable Set of Views
– Vocabulary Messaging (HL7 CDA and Templates Conformant)
© Copyright Mayo Foundation for Medical Education and Research 2004
Usability Laboratory Experience
• Compositionality is Essential for a robust and clinically useful Document Retrieval Tool
• Modifiers and Qualifiers provided the greatest Utility• The Interface Design is integral to the acceptance of
the Search Engine• Designers must work to minimize Cognitive Overhead
and potential sources of Disorientation.
© Copyright Mayo Foundation for Medical Education and Research 2004
Comparable Data
• SNOMED-CT– Description Logic-Based Terminology– Compositional System– ~340,000 Concepts– ~800,000 Terms– LBI version adds 400,000 Terms– Over 30,000,000 Indices to the SNOMED-CT
Terminology
© Copyright Mayo Foundation for Medical Education and Research 2004
• Acute myocardial infarction of the anterolateral wall• Heart attack, Anterolateral cardiac wall, Acute• AMI, Anterolateral Wall• Acute MI of the Anterolateral Wall
Compositional Systems
• - Myocardial infarction (disorder) [22298006]– - [has Finding Site] . Entire myocardium of
anterolateral region (body structure) [190762001] – - [is Modified By] .
Acute (qualifier value) [53737009]
© Copyright Mayo Foundation for Medical Education and Research 2004
An Evaluation of the Content Coverage of SNOMED-CT for Clinical Problem Lists
ByPeter L. Elkin, MD1, Steven H. Brown, MD2, Casey Husser, MD1, Brent A. Bauer, MD1, Dietlind Wahner-Roedler, MD1, S. Trent Rosenbloom, MD2, Ted Speroff, PhD2
1. Mayo Foundation for Medical Education and Research2. Vanderbilt University
© Copyright Mayo Foundation for Medical Education and Research 2004
Methods
• 4,996 Most Common Unique Mastersheet Index Entries were Mapped to SNOMED-CT
• Two expert reviewers (Consultants) independently graded the mappings (using the automated mappings plus a SNOMED-CT browser)
• Disagreements were adjudicated by a third reviewer
# engine
SNOMED-CT
Misspelling
Match Type
Concept Mapping
Decomposition
16 TPFPTNFN
TPFPTNFN
CID abdominal hernia Hernia of abdominal cavity (disorder) [52515009] [K]
17 TPFPTNFN
TPFPTNFN
CID abdominal mass Abdominal mass (finding) [271860004] [K]
© Copyright Mayo Foundation for Medical Education and Research 2004
Results
SNOMED-CT Results
383 FN
9 FP
36 TN
4568 TP
SmartAccess Vocabulary Server
Results
256 FN
9 FP
419 TN
4312 TP
Results SNOMED-CT SmartAccess Vocabulary Server
SAVS with Synonyms
Sensitivity 92.3% 94.4% 99.7%
Specificity 80.0% 97.9% 97.9%
Positive Likelihood Ratio
4.62 45.0 47.5
Positive Predictive Value
99.8% 99.8% 99.8%
Negative Predictive Value
8.6% 62.1% 97.0%
© Copyright Mayo Foundation for Medical Education and Research 2004
Results
• The sensitivity of SNOMED-CT without the use of composition was only 51.4%. Using the McNemar Chi-Square Test there was a significant difference between the sensitivity of SNOMED-CT with and without using composition (51.4% vs. 92.3%; p<0.001).
© Copyright Mayo Foundation for Medical Education and Research 2004
Conclusions Regarding Medical Knowledge Representation using SNOMED-CT
• SNOMED-CT has good coverage of the terms used commonly in medical problem lists.
• Improvements to synonymy and the addition of missing modifiers would lead to the greatest return on investment toward improved coverage of common problem statements.
• Compositional expressions are required to exactly represent a significant portion of common problem statements (p<0.001).
© Copyright Mayo Foundation for Medical Education and Research 2004
Avoid the Compositional Tower of Babel
© Copyright Mayo Foundation for Medical Education and Research 2004
Ambiguous Representation
• “Hepatoma Metastatic to the Lungs”– Malignant neoplastic
disease (disorder) [363346000]
– Entire liver (body structure) [181268008]
– Entire lung (body structure) [181216001]
– Secondary malignant neoplastic disease (disorder) [128462008]
• “Liver Cancer” “Lung” or• “Lung Cancer” “Liver”
© Copyright Mayo Foundation for Medical Education and Research 2004
Inter-Semantic Relationships
• Dx = (defconcept Hepatoma Metastatic to the Lung
• (and disease
• (and (some Assoc-Morphology “Metastatic Neoplasm”)
• (some Assoc-Topography “Lung”))
• (and (some Assoc-Etiology “Malignant Neoplasm”)
• (some Assoc-Topography “Liver”))))
© Copyright Mayo Foundation for Medical Education and Research 2004
Generic Rule
• Dx = (defconcept Dxxxxxx • (and disease
• (and (some Assoc-Morphology x)
• (some Assoc-Topography (at least 1 Topography {or t1, t2 ,t3, … tm (m1)}))
• (and (some Assoc-Etiology y)
• (some Assoc-Topography (at least 0 Topography {or t1, t2, t3, … tn (n1))))))
© Copyright Mayo Foundation for Medical Education and Research 2004
Conceptual Relativity
• Level 1 - Diseases • | Distance 1.0• Level 2 - Cardiovascular Diseases (2000 Siblings)• | Distance = (((256/2000) * (5-2)) * 1.0) = 0.384• Level 3 - Congestive Heart Failure (250 Siblings)• | Distance = (((6/250) * (5-3) * .384) = 0.0399• Level – 4 LV Systolic Dysfunction (5 Siblings)• | Distance = (((1/5) * (5-4) * 0.0399) = 0.008• Level 5 - LV Systolic Dysfunction, Class III HF (1
Sibling)
• Generalization:• ((Sc((ScTT/Sp * (Level/Sp * (LevelTT-Levelp)) * DistLevel –1)-Levelp)) * DistLevel –1)
© Copyright Mayo Foundation for Medical Education and Research 2004
Semantic Distance from Feature Set Recognition
• Myocardial Infarction• HasMorphology Infarct• HasFindingSite Myocarium• And • Heart Attack• HasMorphology Infarct• HasFindingSite Myocarium
Acute Myocardial InfarctionHasMorphology InfarctHasFindingSite MyocariumHasModifier Acute
N N N
Z = ∑i=1 ai(1-Ncsc(m)/Nc) + ∑i=1 bi(1-Ncs(m)/Nc) – ∑i=1 di(1-Ncsc(nm)/Nc) Formula 1: Feature Set Similarity Metric
© Copyright Mayo Foundation for Medical Education and Research 2004
Level One Ontology
Champus_coverage
handicapped_program_cd : CEnon_avail_cert_on_file_ind : BLretirement_dttm : TSstation_id : II
Referral
authorized_visits_qty : REALdesc : EDreason_txt : ED
Healthcare_finances
Message_control
Acts (Services)
Appointments & scheduling
Roles
HEALTH LEVEL 7 REFERENCE INFORMATION MODEL RIM_0100
released January 2001 reflects RIM changes through Harmonization on 11/17/2000
Observation
value : ANYderivation_expr : STmethod_cd : SET<CV>body_site_cd : SET<CD>interpretation_cd : SET<CS>
Medication
form_cd : CDroute_cd : CDdose_qty : PQstrength_qty : PQrate_qty : PQdose_check_qty : PQmethod_cd : SET<CV>body_site_cd : SET<CD>substitution_cd : CV
Procedure
entry_site_cd : SET<CD>method_cd : SET<CV>body_site_cd : SET<CD>
Supply
qty : PQ
Diet
energy_qty : PQcarbohydrate_qty : PQ
Consent
Enitites
Document_service
completion_cd : CVset_id : IIstorage_cd : CVversion_nbr : INTcopy_dttm : TSorigination_dttm : TS
Billboard produced by:Rochester Outdoor Advertising
Healthcare_provider
specialty_cd : CV
Containercapacty_qty : PQheight_qty : PQdiameter_qty : PQbarrier_delta_qty : PQbottom_delta_qty : PQseparator_type_cd : CDcap_type_cd : CD
Access
gauge_qty : PQentry_site_cd : CDbody_site_cd : CD
Devicemanufacturer_model_nm : STlast_calibration_dttm : TSsoftware_nm : STlocal_remote_control_state_cd : CEalert_level_cd : CE
Notary_public
notary_county_cd : CEnotary_state_cd : CE
Employee_Employer
addr : SET<AD>hazard_exposure_txt : EDjob_class_cd : CVjob_title_nm : STtelecom : SET<TEL>protective_equipment_txt : EDsalary_qty : MOsalary_type_cd : CVstatus_cd : CSjob_cd : CE
Specimen
body_site_cd : CE
Living_subjectbirth_dttm : TSdeceased_dttm : TSdeceased_ind : BLadministrative_gender_cd : CEorgan_donor_ind : BLmultiple_birth_ind : BL
Materialform_cd : CVdanger_cd : CEeffective_tmr : IVL<TS>handling_cd : CE
Practitioner_provider
position_cd : CVprimary_care_ind : BL
Practitioner_Certifier
board_certification_type_cd : CVcertification_dttm : TSrecertification_dttm : TSresidency_field_cd : CE
Military_person
military_branch_of_service_cd : CVmilitary_rank_nm : STmilitary_status_cd : CV
Placegps_txt : STposition_txtaddr : ADdirections_txt
Manufactured_materialexpiration_dttm : TSlot_nbr : ST
Health_chart
Health_chart_deficiency
assessment_dttm : TSdesc : EDlevel_cd : CVtype_cd : CV
1
0..*
has_an_assessment_of
1
is_assessed_against
0..*
Inpatient_encounter
length_of_stay_qty : PQ
Non_Person_living_subjecttaxonomic_classification_cd : CEbreed_cd : CEstrain_txt : EDeuthanasia_ind : BLproduction_class_cd : CEgender_status_cd : CE
Diagnostic_related_group_definition
base_rate_qty : MOcapital_reimbursement_qty : MOcost_weight_qty : MOmajor_diagnostic_category_cd : CEoperating_reimbursement_qty : MOreimbursement_qty : MOstandard_day_qty : PQstandard_total_charge_qty : MOtrim_high_day_qty : PQtrim_low_day_qty : PQ
Encounter_drg
approval_ind : BLconfidential_ind : BLcost_outlier_qty : MOdesc : EDgrouper_review_cd : CEgrouper_version_id : IIoutlier_days_nbr : REALoutlier_reimbursement_qty : MOoutlier_type_cd : CV
1
0..*
defines 1
is_defined_by0..*
Billing_information_item
condition_cd : CEoccurrence_cd : CEoccurrence_dttm : TSoccurrence_span_cd : CEoccurrence_span_from_dttm : TSoccurrence_span_thru_dttm : TSquantity_nbr : REALquantity_type_cd : CVvalue_amtvalue_cd : CE
Patient_Provider
Organizationorg_nm : SET<ON>standard_industry_class_cd : CEaddr : SET<AD>
Financial_transaction
extended_qty : MOfee_schedule_cd : CEinsurance_qty : MOposting_dttm : TSqty : MOtransaction_batch_id : IIunit_qty : MOunit_cost_qty : MO
Clinical_document_headeravailability_status_cd : CVchange_reason_cd : CVcompletion_status_cd : CVconfidentiality_status_cd : CVcontent_presentation_cd : CVdocument_creation_dttm : TSfile_nm : STlast_edit_dttm : TSreporting_priority_cd : CEresults_report_dttm : TSstorage_status_cd : CVtranscription_dttm : TSdocument_change_cd : CVversion_nbr : INTversion_dttm : TS
Clinical_document
Patient_billing_account
adjustment_cd : CVcertification_required_ind : BLcurrent_unpaid_balance_qty : MOexpected_insurance_plan_qty : REALexpected_payment_source_cd : CVnotice_of_admission_dttm : TSnotice_of_admission_ind : BLpatient_financial_class_cd : CVprice_schedule_id : IIreport_of_eligibility_dttm : TSretention_ind : BLsignature_on_file_dttm : TSspecial_program_cd : CVstoploss_limit_ind : BLsuspend_charges_ind : BLtotal_adjustment_qty : MOtotal_charge_qty : MOtotal_payment_qty : MOseparate_bill_ind : BLbad_debt_recovery_qty : MObad_debt_transfer_qty : MO
Guarantor_contract
billing_hold_ind : BLbilling_media_cd : CEcharge_adjustment_cd : CEcontract_duration_cd : CEcontract_type_cd : CEeffective_tmr : IVL<TS>interest_rate_nbr : REALperiodic_payment_qty : MOpriority_ranking_cd : CV
Insurance_certification
certification_duration_qty : PQeffective_tmr : IVL<TS>id : IIinsurance_verification_dttm : TSmodification_dttm : TSnon_concur_cd : CEnon_concur_effective_dttm : TSpenalty_qty : MOreport_of_eligibility_dttm : TSreport_of_eligibility_ind : BL
10..*has_coverage_affirmed_by 1
affirms_insurance_coverage_for
0..*
Individual_healthcare_practitioner
fellowship_field_cd : CEgraduate_school_nm : ONgraduation_dttm : TSboard_certified_ind : BL
Role-role relationships
Healthcare_benefit_coverage_item
service_category_cd : CVservice_cd : CEservice_modifier_cd : CEauthorization_ind : BLnetwork_ind : BLassertion_cd : CEcovered_parties_cd : CEqty : REALquantity_qualifier_cd : CEtime_period_qualifier_cd : CErange_low_qty : PQrange_high_qty : PQrange_units_cd : CVeligibility_cd : CEpolicy_source_cd : CEeligibility_source_cd : CEcopay_limit_ind : BL
Healthcare_benefit_product_policy
assignment_of_benefits_ind : BLbenefit_product_desc : EDbenefit_product_nm : STbenefit_product_type_cd : CEbenefits_coordination_ind : BLcob_priority_nbr : REALcombine_baby_bill_ind : BLgroup_benefit_ind : BLmail_claim_party_cd : CErelease_information_cd : CEstatus_cd : CScoverage_type_cd : CEagreement_type_cd : CEpolicy_category_cd : CEaccess_protocol_desc : ED
Financial_act
effective_tmr : IVL<TS>reason_cd : CEstatus_dttm
Unmapped_financial_classes(from RIM_Healthcare_finances)
Language_ability
mode_cd : CVproficiency_level_cd : CV
Persondisability_cd : CEethnic_group_cd : CErace_cd : CEambulatory_status_cd : CVbirth_order_nbr : INTeducation_level_cd : CVliving_arrangement_cd : CVmarital_status_cd : CVreligious_affiliation_cd : CVstudent_cd : CVcredit_rating_cd : CVaddr : SET<AD>special_accommodation_cd : SET<CV>
Person_Language
0..*
1
specifies_ability_in 0..*
is_specified_by1
1
0..*
communicates_in
1
is_communicated_by
0..*
Working_list
ownership_level_cd
Public_health_case
detection_method_cdtransmission_mode_cddisease_imported_cd
Outbreak
tmr
Act_relationship
type_cd : CSinversion_ind : BLsequence_nbr : INTpriority_nbr : INTpause_qty : PQcheckpoint_cd : CSsplit_cd : CSjoin_cd : CSnegation_ind : BLconjunction_cd : CS
Act_context
level_cd
Act
id : SET<II>mood_cd : CStype_cd : CCtxt : EDstatus_cd : CSactivity_time : GTScritical_time : GTSconfidentiality_cd : SET<CV>max_repeat_nmr : IVL<INT>interruptible_ind : BLpriority_cd : SET<CV>orderable_ind : BLavailability_dttm : TS
0..*1
has_target
0..*
is_target_for
1
0..*1
has_source
0..*
is_source_for
1
1..*
0..*
originates_in_context_of1..*
provides_context_for0..*
Role_relationship
type_cd : CCeffective_tmr : IVL<TS>id : SET<II>status_cd : CSresponsibility_cd : SET<CE>position_nbr : LIST<INT>qty : PQcertificate_txt : ED 0..*
0..1
is_part_of
0..*
has_parts
0..1
Participation
type_cd : CStmr : IVL<TS>note_text : EDsignature_cd : CVfunction_cd : CDawareness_cd : CVsignature_txt : EDencounter_accommodation_cd : CVstatus_cd : CS
0..*
1for
0..*
has 1
Role
type_cd : cceffective_tmr : IVL<TS>addr : SET<AD>telecom : SET<TEL>
0..*
1
has_as_target
0..*
is_target_for11
0..*
is_source_of
1
has_as_source
0..*
0..*0..1
has_as_participant
0..*
participates_in
0..1Entity_name
effective_tmr : IVL<TS>nm : ENpurpose_cd : CV
Entityid : SET<II>type_cd : CCdeterminer_cd : CSimportance_status_txt : EDqtytelecom : SET<TEL>descstatus_cd : CS
10..*
plays_a_role
1is_played_by
0..*
0..* 1
is_for
0..*
has
1
Message_interaction
1..*shall_receive1..*1..1sends1..1
0..1
is_communicated_as
0..1
Transportation
Preauthorization
authorized_encounters_qty : REALauthorized_period_begin_tmr : IVL<TS>id : IIissued_dttm : TSrequested_dttm : TSrestriction_desc : EDstatus_cd : CSstatus_change_dttm : TS
Patient_encounter
discharge_disposition_cd : CVacuity_level_cd : CVbirth_encounter_ind : BLstatus_reason_cd : CVclassification_cd : CVencounter_classification_cd : CVpractice_setting_cd : CVvaluables_desc : EDpre_admit_test_ind : BLsource_cd : CVspecial_courtesies_cd : CVvaluables_location_desc : EDeffective_tmr
0..*
1is_utilized_during
0..*utilizes
1
1
0..1
is_authorized_by
1
authorizes
0..1
Healthcare_facilitylicensed_bed_nbr : REALmobile_ind : BL
Encounter_facility_association
effective_tmr : IVL<TS>status_cd : CStransfer_reason_cd : CV
0..*
1
is_used_by
0..*
uses
11
0..*
is_site_for1
is_sited_at
0..*
Schedule
status_cd : CSslot_size_increment_qty
Resource_slot
status_cd : CStime_slot : GTS
1
0..*
manages1
is_managed_by
0..*
Entity
RoleParticipation
ActRelationship
RoleRelationship
Act
Entity
RoleParticipation
ActRelationship
RoleRelationship
Act
© Copyright Mayo Foundation for Medical Education and Research 2004
Level Two OntologyEHR architecture (Level 2 Ontology: Healthcare Specific)
Core Classes
Patient Clinical State
1 1..*
11..*Episode of Care
1 1..*1 0..*
Documents
Clinical Reminders
1..*
0..*
1 1..*
Reports
1 1..*
Quality Assurance
0..*
0..*Abstraction
*
*
1 1..*
Surveillance
0..*
1
EncounterNon-Encounter Event
Diagnosis
1
0..*
Symptoms
1
0..*
Medications
0..*
1
ProcedureOrderResult
0..*
0..*
1
0..* 1
0..*
Privileged Clinician10..*
0..*
1..*
**
* *
10..*
1
0..*
Prescription
1*
*
1
*
*
*
*
*
*
1
0..*
1..*
0..*
*
1
1..*
0..*
1
0..*
0..*
0..*
1
0..*
1..*
1..*
Best Practice Rules
*
1
1
*
Temporal Model
*
*
-Authenticate-Authorization-Confidentiality-Integrity-Non-reputability
Security management Information Base
Authentication1 1Privileges
1 *
Audit Log
*
*
*
1
-Identity
Clinician
1
1
-Allergic-Non-allergic
Adverse Reactions
* *
1
*
1
*
* 1
1 1
Genomics/Proteomics*
1 11
*
1
1
0..*
Security Policies
*
1
* 1
© Copyright Mayo Foundation for Medical Education and Research 2004
Level Three Ontology
• Fully Encoded Health Record• Consistent with the Level One and Two
Ontologies for Health• Compositional Expressions are assigned
Automagically• No Human effort is needed so that the practice of
Medicine does not have to be shaped around information systems but instead the Information Systems can unobtrusively improve Patient Care.
• Example…………..