Manual innuPREP PCRpure Kit

Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

  • Upload
    others

  • View
    3

  • Download
    0

Embed Size (px)

Citation preview

Page 1: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

Manual

innuPREP PCRpure Kit

Page 2: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

!" #$%$$%$ &&&&&&&&&&&&&&&%$

!" #$%$$#$ &&&&&&&&&&&&&&&#$

!" #$%$'#$ &&&&&&&&&&&&&'#$

#$%$ '$%%(

'

Page 3: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

)*+,-+,.&&

/++01231&1)2405-&!/,&&&& 6..0-&$%&7&'$%'& %&

Contents

&

1 Safety precautions ......................................................................... 3

2 Storage conditions......................................................................... 3

3 Function testing and technical assistance................................... 3

4 Product use and warranty ............................................................. 3

5 Kit components .............................................................................. 4

6 General Scheme............................................................................. 4

7 Product specifications................................................................... 5

&

8 Protocol: Purification and concentration of PCR products from

PCR reactions up to 50 µl .............................................................. 6

&

9 Troubleshooting ............................................................................. 8

&

&

Page 4: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

)*+,-+,.& &&

&

'& 6..0-&$%&7&'$%'&& /++01231&1)2405-&!/,&

&

Page 5: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

& "89-,:&45-;80,/*+.&&

/++01231&1)2405-&!/,&&&& 6..0-&$%&7&'$%'& <&

1 Safety precautions

=>>&?0-&; 85-& 8+?&8, ,-+,/*+&. @*0>?& A-& -B-5;/.-?&/ +&@ 8+?>/+C&, @-&D8,-5/8>.&8+?&5-8C-+,.&;*+,8/+-?&/+&,@-&E/,F&=>G8:.&G-85&C>*H-.&G@/>-&@8+?>/+C&,@-.-&5-8C-+,.&8+?&8H*/?&8+:&.E/+&;*+,8;,I& 6+&;8.-&*9&;*+,8;,J& 9>0.@&-:-.&*5 &.E/+&G/,@&8&> 85C-&8D*0+,&*9&G8,-5&/DD-?/8,->:F&

&

2 Storage conditions

K@-&/ ++01231&1)2405-&! /,&. @*0>?& A-&. ,*5-?& ?5:J&8, &5 **D&, -D4-58,05-&L %MN&'#&O)PF&6 ,&/.&.,8A>-&9*5&8,&>-8.,&%'&D*+,@.&0+?-5&,@-.-&;*+?/,/*+.F&Q-9*5-&-H-5:&0.-&D8E-&. 05-&, @8,&8 >>&; *D4*+-+,.&@ 8H-&5 **D& ,-D4-58,05-F&6 9&, @-5-&85 -& 8+:&45-;/4/,8,-.&G /,@/+&, @-&45 *H/?-?&. *>0,/*+.&. *>H-&, @-.-&45 -;/4/,8,-.&A: &; 85-90>&G85D/+CF&

&

3 Function testing and technical assistance

K@-&=+8>:,/E&R-+8&=S&C0858+,--.&,@-&;*55-;,&90+;,/*+&*9&,@-&E/,&9*5&844>/;8,/*+.&8.&?-.;5/A-?&/+&,@-&D8+08>F&K@-&;*D4*+-+,.&*9 &-8;@&/++01231&1)2405-&!/,&G-5-&,-.,-?&/+&405/9/;8,/*+&*9&1)2&958CD-+,.&*9&?/99-5-+,&>-+C,@F&

T-& 5-.-5H-&, @-&5 /C@,&, *&; @8+C-&*5 & D*?/9:&*05 &45 *?0;,.& ,*& -+@8+;-&, @-5-&4-59*5D8+;-&8+?&?-./C+F&69&:*0&@8H-&8+:&U0-.,/*+.&*5&45*A>-D.&5-C85?/+C&8+:&8.4-;,.&* 9&, @-&/ ++01231&1 )2405-&! /,&*5 &*, @-5&= +8>:,/E&R -+8& =S&45 *?0;,.J&4>-8.-&?*&+*,&@-./,8,-&,*&;*+,8;,&0.F&V*5&,-;@+/;8>&.044*5,&*5&905,@-5&/+9*5D8,/*+&/+&S-5D8+:&4>-8.-&?/8>&WMX&<(&M%&7&YY&XM&$$F&V*5&*,@-5&;*0+,5/-.&4>-8.-&;*+,8;,&:*05&>*;8>&?/.,5/A0,*5F&

&

4 Product use and warranty

K@-&0.-5&/.&5-.4*+./A>-&,*&H8>/?8,-&,@-&4-59*5D8+;-&*9&,@-&=+8>:,/E&R-+8&=S&E/,.&9*5&8+:&485,/;0>85&0.-J&./+;-&,@-&4-59*5D8+;-&;@858;,-5/.,/;.&*9&*05&E/,.&@8H-&+*,&A--+&H8>/?8,-?&9*5&8+:&.4-;/9/;&844>/;8,/*+F&=+8>:,/E&R-+8&=S&E/,.&D8:&A-&0.-?&/+&; >/+/;8>&?/ 8C+*.,/;&> 8A*58,*5:&. :.,-D.&8 9,-5&, @-&> 8A*58,*5:&@8. & H8>/?8,-?&, @-&;*D4>-,-&?/8C+*.,/;&.:.,-D&8.&5-U0/5-?&A:&)Z6=[&\\&5 -C0>8,/*+.&/+&,@-&]F"F&*5&-U0/H8>-+,.&/+&*,@-5&;*0+,5/-.F&

=>>&45 *?0;,.&. *>?& A:&, @-&= +8>:,/E&R -+8&=S& 85-&. 0A^-;,-?&, *& -B,-+./H-&U 08>/,:&;*+,5*>&45 *;-?05-.&8 +?&85 -&G 8558+,-?&, *& 4-59*5D& 8.&?-. ;5/A-?& G@-+&0. -?&;*55-;,>:F&=+:&45*A>-D.&.@*0>?&A-&5-4*5,-?&/DD-?/8,->:F&

&

!Note

V*5&5-.-85;@&0.-&*+>:I&

Page 6: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

!/,&;*D4*+-+,.&&

&

M& 6..0-&$%&7&'$%'&& /++01231&1)2405-&!/,&

5 Kit components

!Important

",*5-&8>>&;*D4*+-+,.&8,&5**D&,-D4-58,05-F&

& 10 purifications 50 purifications 250 purifications

Binding Buffer %$&D>& #$&D>& '#$&D>&

Elution Buffer '&D>& #&D>& <$&D>&

Spin Filter LC5--+P %$& #$& #&B&#$&

Receiver Tubes %$& #$& #&B&#$&

Elution Tubes %$& #$& #&B&#$&

Manual %& %& %&

&

&

6 General Scheme

&

Addition of Binding Buffer to the PCR reaction mix

Binding of the PCR fragments onto Spin Filter (green)

Elution of the PCR fragments&

&

&

&

Page 7: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

&

&&

&

Short operation manual – innuPREP PCRpure KitPuplication No.: HB_KS-5010_e_120116

1/ 2

&

!&)0,&8,&,@-&.;8,,-5-?&>/+-&8+?&>8D/+8,-&,@-&;85?&9*5&8&D*5-&;*+H-+/-+,&@8+?>/+C&*+&,@-&,8A>-&,*4&!&

innuPREP PCRpure Kit

Protocol: Purification and concentration of PCR products

&

& &

%F& ",85,/+C&D8,-5/8>& "& 1)2&5-8;,/*+&D/B& "& ]4&,*&#$&_>&

'F& Q/+?/+C&*9&1)2&958CD-+,.&

&

&

"& =??&"4/+&V/>,-5&,*&2-;-/H-5&K0A-&

"& =??&#$$&_>&Q/+?/+C&Q099-5&,*&"4/+&V/>,-5&

"& =??&1)2&5-8;,/*+&D/B&,*&"4/+&V/>,-5&

"& `/Ba&04&8+?&?*G+&4/4-,,/+C&

&

=>,-5+8,/H-a&

"& =??&#$$&_>&Q/+?/+C&Q099-5&,*&1)2&5-8;,/*+&D/BJ&b*5,-B&

"& =??&"4/+&V/>,-5&,*&2-;-/H-5&K0A-&

"& =??&D/B-?&.8D4>-&,*&"4/+&V/>,-5&&

"& %$F$$$&B&C&L!%'F$$$&54DPa&'&D/+&&&

<F&& 3>0,/*+&*9&1)2&958CD-+,.&

&&

"& =??&"4/+&V/>,-5&,*&8+&3>0,/*+&K0A-&

"& =??&D/+/D0D&%$&_>&3>0,/*+&Q099-5&L,*&;-+,-5&*9&,@-&"4/+&V/>,-5P&

"& 6+;0A8,/*+a&%&D/+&c&2K&

"& (F$$$&B&C&L!\F$$$&54DPa&%&D/+&

& &&

&&

& & &

&

&

& &

&

&

&

& & & & && &

&&

&

Page 8: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

&

&&

&

Short operation manual – innuPREP PCRpure KitPuplication No.: HB_KS-5010_e_120116

2/ 2

&

& &

&

& &

!&)0,&8,&,@-&.;8,,-5-?&>/+-&8+?&>8D/+8,-&,@-&;85?&9*5&8&D*5-&;*+H-+/-+,&@8+?>/+C&*+&,@-&,8A>-&,*4&!

&

Order No.:& \M#d!"d#$%$$%$& %$&5-8;,/*+.& &

& \M#d!"d#$%$$#$& #$&5-8;,/*+.& &

& \M#d!"d#$%$'#$& '#$&5-8;,/*+.&

& & & &

K@/.&?*;0D-+,8,/*+&?-.;5/A-.&,@-&.,8,-&8,&,@-&,/D-&*9&40A>/.@/+CF&6,&+--?.&+*,&+-;-..85/>:&8C5--&G/,@&90,05-&H-5./*+.F&"0A^-;,&,*&;@8+C-I&

Expression and further use permitted with indication of source. © 2012 Analytik Jena AG, AJ Innuscreen GmbH

Manufacturer:=R&6++0.;5--+&SDAe&&

&2*A-5,d2f..>-d",58g-&%$&%<%'#&Q-5>/+&

Distribution/Publisher:=+8>:,/E&R-+8&=S&

&!*+58?dh0.-d",58g-&%&$YYM#&R-+87&S-5D8+:&

&

1@*+-&V8B&

WMX&L$P&<(&M%&7&YYdXM&$$&WMX&L$P&<(&M%&7&YYdY(&YY&Y(&

GGGFA/*F8+8>:,/Ed^-+8F;*D&>/9-.;/-+;-c8+8>:,/Ed^-+8F;*D&

&

&

Page 9: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

& 15*?0;,&.4-;/9/;8,/*+.&&

/++01231&1)2405-&!/,&&&& 6..0-&$%&7&'$%'& #&

7 Product specifications

&

1. Starting material:&

1)2&5-8;,/*+&D/B,05-.&L04&,*&#$&_>P&

&

2. Time for isolation:

!& <&D/+0,-.&

!& Q8.-?&*+&8&+-G&,G*d.,-4&45*;-?05-&

&

3. Fragment length:&

"& ($&A4&N&<$&EA4&

&

4. Binding capcity:&

i&'$&_C&

&

5. Rate of recovery:

!& ($&N&X#&j&&

!& k-4-+?/+C&*+&,@-&>-+C,@&*9&,@-&1)2&958CD-+,.&

&

Page 10: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

15*,*;*>a&105/9/;8,/*+&8+?&;*+;-+,58,/*+&*9&1)2&45*?0;,.&95*D&1)2&5-8;,/*+.&04&,*&#$&_>&&

&

(& 6..0-&$%&7&'$%'&& /++01231&1)2405-&!/,&

8 Protocol: Purification and concentration of PCR products from PCR reactions up to 50 µl

!Important

Q-9*5-&. ,85,/+C&G /,@&, @-&405 /9/;8,/*+&45 *;-?05-&4> 8;-& 8&" 4/+&V />,-5&LC5--+P&/+,*&8&'F$&D>&2-;-/H-5&K0A-F&

&

1. Binding of the PCR fragments

!& =??&500 µl Binding Buffer&,*&,@-&"4/+&V/>,-5F&

!& =??&04&,*&50 µl&*9&:*05&PCR reaction mixture&,*&,@-&"4/+&V/>,-5&LC5--+P&G@/;@&/.&8>5-8?:&45-d9/>>-?&G/,@&,@-&Q/+?/+C&Q099-5F&

!& `/B&Q/+?/+C&Q099-5&8+?&1)2&5-8;,/*+&D/B,05-&A:&4/4-,,/+C&,@5--&,/D-.&04&8+?&?*G+F&Don’t destroy the filter membrane!&

Alternatively

!& Mix 500 µl Binding Buffer&with up to 50 µl& *9&, @-& PCR sample& H-5:&G->>&A :&4/ 4-,,/+C&* 5&H*5,-B/+C&*0,./?-& ,@-&"4/+&V/>,-5&/+&8&.-4858,-&5-8;,/*+&,0A-F&

!& =9,-5&,@/.& ,58+.9-5& ,@-&D/B-?&.8D4>-&;*D4>-,->:&*+,*&8&" 4/+&V/>,-5F&

&

!& )-+,5/90C-&9 *5&'&D /+0,-.&8 ,&% $F$$$&B&C&L!%'F$$$&5 4DPF&k /.;85?&,@-&2-;-/H-5&K0A-F&

Note:&=H*/?&8+:&;*+,8;,&*9&,@-&"4/+&V/>,-5&G/,@&,@-&9>*G&,@5*0C@F&&

2. Elution of the PCR fragments

!& 1>8;-&,@-&"4/+&V/>,-5&/+,*&8&3>0,/*+&K0A-F&

!& 1/4-,,-&at least&10 µl Elution Buffer&L*5&??e'$P&?/5-;,>:&*+,*&,@-&;-+,-5&*9&,@-&"4/+&V/>,-5F&

!& 6+;0A8,-&9*5&%&D/+0,-&8,&5**D&,-D4-58,05-F&

!& )-+,5/90C-& 9*5& %&D/+0,-& 8,& (F$$$&B&C& L!\F$$$&54DPF& K@-&3>0,/*+&K0A-&+*G&;*+,8/+.&,@-&405/9/-?&1)2&958CD-+,.F&

&

&

&

&

&&

Page 11: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

& 15*,*;*>a&105/9/;8,/*+&8+?&;*+;-+,58,/*+&*9&1)2&45*?0;,.&95*D&1)2&5-8;,/*+.&04&,*&#$&_>&&

/++01231&1)2405-&!/,&&&& 6..0-&$%&7&'$%'& Y&

!Important notes

%F&K*&/+;5-8.-&,@-& 9/+8>&kl=&: /->?&G-&5-;*DD-+?&8+& -B,-+?-?&/+d;0A8,/*+&,/D-&G/,@&3>0,/*+&Q099-5&L04&,*&#&D/+0,-.PJ&G@/;@&G/>>&>-8?&,*&8&.>/C@,>:&@/C@-5&9/+8>&:/->?F&

'F&V*5&; *+;-+,58,/*+&* 9& 1)2&9 58CD-+,.&/ ,&/ .&4*. ./A>-&, *&4-5 9*5D&, @-&->0,/*+&G/,@&8&>*G-5&H*>0D-&*9&3>0,/*+&Q099-5&,@8+&,@-&H*>0D-&*9&,@-&.,85,/+C&1)2&D/B,05-F&K@-&D/+/D0D&H*>0D-&/.&%$&_>F&

<F&69&,@-&H*>0D-&*9&,@-&1)2&5-8;,/*+&D/B&/.&@/C@-5&,@8+&#$&_>J&.4>/,&,@-&1)2&D /B& 8+?&8? ?&, *& -8;@&485 ,&#$ $& _>&Q /+?/+C&Q 099-5F&Z *8?&A* ,@&D/B-.&*+-&8 9,-5&8 +*,@-5&L .0;;-../H->:P&*+&, @-&" 4/+&V />,-5F&) -+,5/d90C-&, @-& 9/5.,&485,& 9*5& %&D /+0,-&8+?&?/ .;85?& ,@-& 9/>,58,-F&)-+,5/90C-&,@-&. -;*+?&485,&* 9&, @-&D /B&9 *5&'&D /+0,-.F& V*>>*G&+*G&, @-&-> 0,/*+&.,-4&8.&?-.;5/A-?&8A*H-F&

Page 12: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

K5*0A>-.@**,/+C&&

&

\& 6..0-&$%&7&'$%'&& /++01231&1)2405-&!/,&

9 Troubleshooting

&

Problem / probable cause Comments and suggestions

Low recovery& &

"& 1**5&->0,/*+&*9&kl= =??&,@-&3>0,/*+&Q099-5&?/5-;,>:&*+,*&,@-&;-+,-5&*9&,@-&"4/+&V/>,-5&L-H-+&/9&8&.D8>>&->0,/*+&H*>d0D-&/.&0.-?PF&

=44>:&,@-&;*55-;,&;-+,5/90C8,/*+&.,-4.F&

"& 15*A>-D.&G/,@&D/+-58>&*/>& K8E-&8&@/C@-5&H*>0D-&*9&Q/+?/+C&Q099-5F

Page 13: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

&

&

engl.&$%7%'&– Analytik Jena AG, Jena

Page 14: Manual KS-5010 innuPREP PCRpure Kit e 120116 WEB 1

Analytik Jena AG

Life Science

Konrad-Zuse-Strasse 1

07745 Jena / Germany

Phone +49 (0) 36 41 77 - 94 00

Fax +49 (0) 36 41 77 - 76 77 76

[email protected]

www.bio.analytik-jena.com