ISMB 2012 - Call for Proceedings

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  • 8/2/2019 ISMB 2012 - Call for Proceedings

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    Call for Proceedings - ISMB 2012

    Proceedings Chair: Bonnie Berger, Massachusetts Institute of

    Technology, Cambridge, United States**Call for Proceedings Submission Site** Closes January 13, 2012

    ISMB 2012 will bring together Bioinformaticians and

    Computational Biologists working in a wide range of disciplines,

    including molecular biology, biology, medicine, computer science,

    mathematics and statistics. Papers that demonstrate both the

    development of new computational techniques AND their

    application to Molecular and Systems Biology, with significant

    outcomes to biomedical, agricultural, and environmental

    questions are especially encouraged.

    Proceedings Submission DeadlineMonday, October 17, 2011 Call for Proceedings Opens

    Friday, January 13, 2012 Proceedings Submission Deadline

    Monday, March 16, 2012 Proceedings Conditional Acceptance Notification

    Monday, March 30, 2012 Revised Proceedings Submission Deadline

    Monday, April 13, 2012 Proceedings (Final Version) Accepted Submission

    We are soliciting high-quality research papers in any aspect of computational biology, including the following areas:

    Area Area ChairApplied Bioinformatics Anna Tramontano, Marie France Sagot

    Bioimaging & Data Visualization Robert Murphy, Sean O'Donohue

    Databases & Ontologies Alex Bateman,Suzanna Lewis

    Disease Models & Epidemiology Simon Kasif, Isaac Kohane

    Evolution & Comparative Genomics Teresa Przytycka, Dannie Durand

    Gene Regulation & Transcriptomics David Gifford, Donna Slonim

    Mass Spectrometry & Proteomics Knut Reinert, Nuno Bandiera

    Population Genomics Russell Schwartz, Eran Halperin

    Protein Interactions & Molecular Networks Mona Singh, Carl Kingsford

    Protein Structure & Function Lenore Cowen, Nir Ben-Tal

    Sequence Analysis Serafim Batzoglou, Cenk Sahinalp

    Text Mining Hagit Shatkay, Alfonso Valencia

    Relevant computational techniques include, but are not limited to: machine learning; data mining; text analysis; pattern recognition;

    knowledge representation; databases; data modeling; combinatorics; stochastic modeling; string and graph algorithms; linguistic

    methods; robotics; constraint satisfaction; data visualization; parallel computation; data integration; modelling and simulation.

    http://www.easychair.org/conferences/?conf=ismb2012http://www.easychair.org/conferences/?conf=ismb2012http://www.easychair.org/conferences/?conf=ismb2012
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    Submission Guidelines

    Papers will be assigned to an Area and three reviews

    sought. Papers may be moved between areas as appropriate -

    this is often necessary for load balance and fit between areas

    during the review process. Accepted papers will be published as

    conference proceedings in an open access, online-only, section

    of a regular issue of the Bioinformatics journal with an electronic

    version distributed to conference delegates. The proceedings will

    be available online approximately one month prior to the

    conference opening.

    Publication of the proceedings as an online part of the

    Bioinformatics journal will result in fully citable articles, indexed

    by Medline and ISI. See the conference proceedings

    forISMB/ECCB 2011 for an example of online-only publication

    by Oxford University Press.

    ISMB 2012 will accept a maximum of 32 Proceedings Track papers and authors of

    accepted papers will be given a 20-minute time slot (plus 5

    minutes for questions) in the conference schedule to provide an

    oral summary of their work.

    Papers can be submitted in either a template-free format or in

    the format following the template for author submission to the OUP

    journal bioinformatics. If the OUP template is used the paper

    length must not exceed nine pages. If the template-free format is

    used the length of the paper must not exceed 12 pages (single

    space, 12 point font), including abstract, figures, tables, and

    bibliography. In either case, the paper must contain an abstract

    whose length does not exceed 250 words.

    After acceptance papers will have to be formatted according to

    the layout style required by the OUP bioinformatics journal and

    will be limited to 9 pages. Formatting requirements can be found

    at:http://www.oxfordjournals.org/bioinformatics/for_authors/subm

    ission_online.html

    If absolutely necessary, submissions can be accompanied by

    supplementary material, similar to submissions to scientific

    journals. The supplementary material should be collected in a

    separate file that is appropriately marked and uploaded as an

    attachment on the paper submission page in EasyChair.

    However, we advise against adding supplementary material, in

    general. Supplementary material will be published on the

    proceedings site alongside the online version of the conference

    paper. We do not support supplementary material presented at

    any other than the publisher's site. Additionally, OUP does not

    edit or typeset supplementary data - it is uploaded online exactly

    as it is received, so authors must ensure its accuracy before

    submitting.

    Papers should be submitted in their final form since the

    evaluation procedure does not allow for additional rounds of

    refinement / modification in response to referee criticisms. Poor

    quality submissions or insufficiently prepared papers are very

    often rejected. Paper presenters must register and pay to attend

    and present at the conference.

    PAPERS NOT CONFORMING TO THESE GUIDELINES WILL

    BE RETURNED WITHOUT REVIEW.

    Papers submitted for review should represent original, previously

    unpublished work. At the time the paper is submitted to ISMB

    2012, and for the entire review period, the paper should not be

    under review by any other conference or scientific journal.

    Papers will be accepted electronically, in PDF format only, at

    thesubmission siteuntil Friday, January 13, 2012. (You have

    until 11.59 p.m. in the time zone of your choice. This means that

    the submission server will be closed at noon, 11:59 am GMT

    (UTC+0), January 14, 2012).

    Notification of conditional acceptance will be provided by e-mail

    no later than Friday, March 16, 2012. Final, corrected versions

    of accepted papers, which must conform to the formatting

    guidelines available when the paper is accepted, are due no later

    than March 30, 2012. Details of the submission process and

    format of accepted papers will be provided at the time of paper

    acceptance.

    Papers not accepted may be resubmitted as a "regular

    conference poster" until Friday, March 16, 2011 or as a "late

    conference poster" until Friday, April 20, 2012. Poster

    information is availablehere.

    For questions concerning the scientific content of submissions,

    please [email protected].

    http://bioinformatics.oxfordjournals.org/content/27/13.tochttp://bioinformatics.oxfordjournals.org/content/27/13.tochttp://bioinformatics.oxfordjournals.org/content/27/13.tochttp://www.oxfordjournals.org/bioinformatics/for_authors/submission_online.htmlhttp://www.oxfordjournals.org/bioinformatics/for_authors/submission_online.htmlhttp://www.oxfordjournals.org/bioinformatics/for_authors/submission_online.htmlhttp://www.oxfordjournals.org/bioinformatics/for_authors/submission_online.htmlhttps://www.easychair.org/account/signin.cgi?conf=ismb2012https://www.easychair.org/account/signin.cgi?conf=ismb2012https://www.easychair.org/account/signin.cgi?conf=ismb2012http://www.iscb.org/ismbeccb2011-submission-details/call-for-postershttp://www.iscb.org/ismbeccb2011-submission-details/call-for-postershttp://www.iscb.org/ismbeccb2011-submission-details/call-for-postersmailto:[email protected]:[email protected]:[email protected]:[email protected]://www.iscb.org/ismbeccb2011-submission-details/call-for-postershttps://www.easychair.org/account/signin.cgi?conf=ismb2012http://www.oxfordjournals.org/bioinformatics/for_authors/submission_online.htmlhttp://www.oxfordjournals.org/bioinformatics/for_authors/submission_online.htmlhttp://bioinformatics.oxfordjournals.org/content/27/13.toc