107
IRELAND The Report referred to in Article 9 of Directive 2003/ 99/ EC TRENDS AND SOURCES OF ZOONOSES AND ZOONOTIC AGENTS IN HUMANS, FOODSTUFFS, ANIMALS AND FEEDINGSTUFFS including information on foodborne outbreaks, antimicrobial resistance in zoonotic agents and some pathogenic microbiological agents IN 2006

IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

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Page 1: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

IRELAND

The Report referred to in Article 9 of Directive 2003/ 99/ EC

TRENDS AND SOURCES OF ZOONOSES ANDZOONOTIC AGENTS IN HUMANS, FOODSTUFFS, ANIMALS ANDFEEDINGSTUFFS

including information on foodborne outbreaks, antimicrobialresistance in zoonotic agents and some pathogenicmicrobiological agents

IN 2006

Page 2: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

INFORMATION ON THE REPORTING AND MONITORING SYSTEMCountry: IrelandReporting Year: 2006Institutions and laboratories involved in reporting and monitoring:Laboratory name Description ContributionCMCL Central meat Control Laboratory Samples taken at prcessing plants

under EU hygiene Package regulationsand submitted to the CMCL (adepartment of Agriculture and Foodofficial laboratory) for analysis(Salmonella, Listeria monocytogenes,Campylobacter, Trichinella)

CVRL Central Veterinary ResearchLaboratory and Department ofAgriculture and Food approvedlaboratories (DAF approved labs)

Samples taken at processing plants andsubmitted to prviate laboratoriesapproved by DAF for Salmonellatesting. Serotyping performed at theCVRL and data compiled by theCVRL

DAF/ FSAI Department of Agriculture and Food/Food safety Authority of Ireland jointproject

Samples taken under the EnhancedPoultry Monitoring Programme whichcommenced in 2000. Samples weretaken at poultry processing plants andsubmitted to a DAf approved privatelaboratory for analysis (Salmonellaand Campylobacter). Samples of Irishand imported poultry meat areincluded.

DCMNR Department of Communications,Marine and Natural Resoucesapproved laboratories

Samples taken at processing plantsunder Food Hygiene Regulations andsubmitted to DCMNR­approvedlaboratories for analysis (Salmonellaand Listeria spp)

DSL Dairy Science Laboratories Samples taken at processing plantsunder EU Hygiene PackageRegulations and submitted to DAFofficial laboratories for analysis(Salmonella and Listeria spp)

Ireland 2006 Report on trends and sources of zoonoses

Ireland 2006

Page 3: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

OFML Official Food MicrobiologicalLaboratories

Samples taken under EU HygienePackage Regulations includingsamples taken for EU coordinatedprogrammes, samples taken fornational survey programmes andcomplaint samples. The majority ofsamples taken at retail level (cateringand retail premises. A smallpercentage of samples taken fromdistributors/ transporters,manufacturers/ packers and primaryproducers

Ireland 2006 Report on trends and sources of zoonoses

Ireland 2006

Page 4: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

PREFACEThis report is submitted to the European Commission in accordance with Article 9 of Council Directive 2003/ 99/ EC1. The information has also been forwarded to the European Food Safety Authority (EFSA). The report contains information on trends and sources of zoonoses and zoonotic agents in Ireland during theyear 2006. The information covers the occurrence of these diseases and agents in humans, animals, foodstuffsand in some cases also in feedingstuffs. In addition the report includes data on antimicrobial resistance in somezoonotic agents and commensal bacteria as well as information on epidemiological investigations of foodborneoutbreaks. Complementary data on susceptible animal populations in the country is also given. The information given covers both zoonoses that are important for the public health in the whole EuropeanCommunity as well as zoonoses, which are relevant on the basis of the national epidemiological situation. The report describes the monitoring systems in place and the prevention and control strategies applied in thecountry. For some zoonoses this monitoring is based on legal requirements laid down by the CommunityLegislation, while for the other zoonoses national approaches are applied. The report presents the results of the examinations carried out in the reporting year. A national evaluation of theepidemiological situation, with special reference to trends and sources of zoonotic infections, is given.Whenever possible, the relevance of findings in foodstuffs and animals to zoonoses cases in humans isevaluated. The information covered by this report is used in the annual Community Summary Report on zoonoses that ispublished each year by EFSA.

­1 Directive 2003/ 99/ EC of the European Parliament and of the Council of 12 December 2003 on the monitoring ofzoonoses and zoonotic agents, amending Decision 90/ 424/ EEC and repealing Council Directive 92/ 117/ EEC, OJ L 325,17.11.2003, p. 31

Ireland 2006 Report on trends and sources of zoonoses

Ireland 2006

Page 5: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

LIST OF CONTENTS1. ANIMAL POPULATIONS 12. INFORMATION ON SPECIFIC ZOONOSES AND ZOONOTIC AGENTS 32.1. SALMONELLOSIS 42.1.1. General evaluation of the national situation 42.1.2. Salmonellosis in humans 42.1.3. Salmonella in foodstuffs 52.1.4. Salmonella in animals 272.1.5. Salmonella in feedingstuffs 312.1.6. Salmonella serovars and phagetype distribution 342.1.7. Antimicrobial resistance in Salmonella isolates 422.2. CAMPYLOBACTERIOSIS 452.2.1. General evaluation of the national situation 452.2.2. Campylobacteriosis in humans 452.2.3. Campylobacter in foodstuffs 462.2.4. Campylobacter in animals 512.2.5. Antimicrobial resistance in Campylobacter isolates 532.3. LISTERIOSIS 542.3.1. General evaluation of the national situation 542.3.2. Listeriosis in humans 542.3.3. Listeria in foodstuffs 552.3.4. Listeria in animals 652.4. E. COLI INFECTIONS 662.4.1. General evaluation of the national situation 662.4.2. E. Coli Infections in humans 662.4.3. Escherichia coli, pathogenic in foodstuffs 672.4.4. Escherichia coli, pathogenic in animals 702.5. TUBERCULOSIS, MYCOBACTERIAL DISEASES 712.5.1. General evaluation of the national situation 712.5.2. Tuberculosis, Mycobacterial Diseases in humans 712.5.3. Mycobacterium in animals 722.6. BRUCELLOSIS 742.6.1. General evaluation of the national situation 742.6.2. Brucellosis in humans 742.6.3. Brucella in foodstuffs 752.6.4. Brucella in animals 752.7. YERSINIOSIS 802.7.1. General evaluation of the national situation 802.7.2. Yersiniosis in humans 802.7.3. Yersinia in foodstuffs 812.7.4. Yersinia in animals 812.8. TRICHINELLOSIS 822.8.1. General evaluation of the national situation 822.8.2. Trichinellosis in humans 822.8.3. Trichinella in animals 82

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2.9. ECHINOCOCCOSIS 832.9.1. General evaluation of the national situation 832.9.2. Echinococcosis in humans 832.9.3. Echinococcus in animals 842.10. TOXOPLASMOSIS 852.10.1. General evaluation of the national situation 852.10.2. Toxoplasmosis in humans 852.10.3. Toxoplasma in animals 872.11. RABIES 882.11.1. General evaluation of the national situation 882.11.2. Rabies in humans 882.11.3. Lyssavirus (rabies) in animals 892.12. Q­FEVER 902.12.1. General evaluation of the national situation 902.12.2. Coxiella (Q­fever) in animals 90

3. INFORMATION ON SPECIFIC INDICATORS OF ANTIMICROBIALRESISTANCE

91

3.1. ESCHERICHIA COLI, NON­PATHOGENIC 923.1.1. General evaluation of the national situation 923.1.2. Antimicrobial resistance in Escherichia coli, non­pathogenic isolates 93

4. INFORMATION ON SPECIFIC MICROBIOLOGICAL AGENTS 954.1. HISTAMINE 964.1.1. General evaluation of the national situation 964.1.2. Histamine in foodstuffs 964.2. ENTEROBACTER SAKAZAKII 974.2.1. General evaluation of the national situation 974.2.2. Enterobacter sakazakii in foodstuffs 974.3. STAPHYLOCOCCAL ENTEROTOXINS 984.3.1. General evaluation of the national situation 984.3.2. Staphylococcal enterotoxins in foodstuffs 98

5. FOODBORNE OUTBREAKS 99

Ireland 2006 Report on trends and sources of zoonoses

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1. ANIMAL POPULATIONS

The relevance of the findings on zoonoses and zoonotic agents has to be related to the size and nature of theanimal population in the country.

Ireland 2006 Report on trends and sources of zoonoses

Ireland 2006 1

Page 8: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

Table Susceptible animal populations

* Only if different than current reporting yearAnimal species Category of

animalsLivestock numbers(live animals)

Number ofslaughtered animals

Number of holdings Number of herds orflocks

Year* Year* Year* Year*Cattle (bovineanimals)

calves (under 1year)

1530038 2006

in total 6321823 2006 1774054 2006 122392 2006Ducks in total 1 2006 8 2006Gallus gallus(fowl)

broilers 12000000 2006 64560000 2006 250 2006 300 2006

breeding flocks,unspecified ­ intotal

617000 2006 583000 2006 100 2006

laying hens 1988500 2006 1970000 300 2006 460 2006grandparentbreeding flocks formeat productionline

74000 2006 70535 2006 7 2006 16 2006

parent breedingflocks for meatproduction line

617000 2006 583000 2006 100 2006

Goats in total 5594 2006 292Pigs breeding animals 167000 2006 96000 2006 380 2006 380 2006

fattening pigs 1451000 2006 2522000 2006 420 2006 420 2006in total 1620000 2006 2619000 2006 480 2006 480 2006

Sheep in total 3601064 35006Turkeys parent breeding

flocks 30000 2006 28000 2006 11 2006

meat productionflocks

900000 2006 2900000 2006 130 2006

in total 830000 2006 2928000 2006 70 2006 141 2006

Ireland 2006 Report on trends and sources of zoonoses

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Page 9: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

2. INFORMATION ON SPECIFIC ZOONOSES AND ZOONOTICAGENTS

Zoonoses are diseases or infections, which are naturally transmissible directly or indirectly between animals andhumans. Foodstuffs serve often as vehicles of zoonotic infections. Zoonotic agents cover viruses, bacteria,fungi, parasites or other biological entities that are likely to cause zoonoses.

Ireland 2006 Report on trends and sources of zoonoses

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Page 10: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

2.1. SALMONELLOSIS

2.1.1. General evaluation of the national situation

2.1.2. Salmonellosis in humans

A. Salmonellosis in humans

Case definition

Salmonellosis (Salmonella enterica) (EU)Clinical descriptionClinical picture compatible with salmonellosis e.g. diarrhoea, abdominal pain, nausea, and sometimesvomiting. Cases may also be asymptomatic. The organism may cause extraintestinal infections.**Laboratory criteria for diagnosisIsolation of Salmonella sp. (non­typhi, non­paratyphi) from a clinical specimenCase classificationPossible: N/ AProbable: A laboratory confirmed isolate without clinical information or a case with clinicalsymptoms that has an epidemiological link*Confirmed: A clinically compatible case that is laboratory confirmed.** The description in the EU case definition document has been elaborated upon here.

Notification system in place

Notifiable since 1948

Ireland 2006 Report on trends and sources of zoonoses

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Page 11: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

2.1.3. Salmonella in foodstuffsTable Salmonella in poultry meat and products thereof (P

art A

)

­­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella spp.

S. Kentucky

S. Paratyphi

S. Brandenburg

S. Infantis

S. Schwarzengrund

S. Enteritidis

S. Typhimurium

Salmonella spp., unspecified

S. Paratyphi B var. Java

S. Agona

S. Blockley

S. Bredeney

S. Cerro

S. Derby

S. Hadar

Meat from broilers (G

allus

gallus)

­­­

fresh

­­ at processing plant ­

Monitoring

­DAF/

FSAI

single

Varies

495

11

3

­ at processing plant ­

Surveillance (1)

­CMCL/

CVRL

single

Varies

5958

609

12

12

11

141

22

3

­ at retail ­ Surveillance

­OFM

Lsingle

25g

80

minced meat

­­­

intended to be eaten cooked ­

­ at processing plant ­

Surveillance

­CMCL

single

25g

10

meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (2)

­CMCL/

CVRL

single

Varies

2136

166

11

12

3

­ at retail ­ Surveillance ­O

FML

single

25g

80

Ireland 2006 Report on trends and sources of zoonoses

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cooked, ready­to­eat

­­ at processing plant ­

Surveillance (3)

­CMCL

single

25g

3536

21

1

­ at retail ­ Surveillance ­O

FML

single

25g

1185

0

carcass

­­­

­ at processing plant ­

Monitoring

­DAF/

FSAI

single

Varies

125

11

­ at processing plant ­

Monitoring (Unspecified)

­DAF/

FSAI

single

Varies

20

Meat from turkey

­­­

fresh

­­ at processing plant ­

Monitoring

­DAF/

FSAI

single

Varies

81

1

­ at processing plant ­

Surveillance (4)

­CMCL/

CVRL

single

Varies

201

94

1

meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (5)

­CMCL/

CVRL

single

Varies

178

41

2

­ at retail ­ Surveillance ­O

FML

single

25g

10

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (6)

­CMCL/

CVRL

single

Varies

731

0

­ at retail ­ Surveillance ­O

FML

single

25g

167

0

Meat from duck

­­ at processing plant ­

Monitoring (Not stated M

eat

from

Duck)

­DAF/

FSAI

single

Varies

136

41

1

fresh

­­­

­ at processing plant ­

Surveillance

­CVRL

single

Not

Stated

108

22

Ireland 2006 Report on trends and sources of zoonoses

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Page 13: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

meat products

­­­

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­CVRL

single

Not

Stated

10

­ at retail ­ Surveillance ­O

FML

single

25g

170

Meat from poultry, unspecified­­

­

­ at processing plant ­

Monitoring (Not stated M

eat

from

Poultry Unspecified)

­DAF/

FSAI

single

Varies

120

meat products

­­­

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

520

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

640

(1) : (C

MCL 3 Tested, 0 Positives) (C

VRL 5955 Tested, 60 Positives)

(2) : (C

MCL 65 Tested, 0 Positives) (C

VRL 2071 Tested, 16 Positives)

(3) : (C

MCL 151 Tested, 0 Positives)(CVRL 3385 Tested, 2 Positives)

(4) : (C

MCL 1 Tested, 0 Positives) (C

VRL 200 Tested, 9 Positives)

(5) : (C

MCL 4 Tested, 0 Positives) (C

VRL 174 Tested, 4 Positives)

(6) : (C

MCL 37 Tested, 0 Positives) (C

VRL 694 Tested, 0 Positives)

Footnote

The sample weight for samples analysed at OFM

Ls and CMCL is usually 25g. N

o sample weight provided for the data subm

itted from

the CVRL. The

sample weight for poultry meat sam

ples taken under the DAF/ FSA

I enhanced poultry monitoring programme varies.

Ireland 2006 Report on trends and sources of zoonoses

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Page 14: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

Table Salmonella in poultry meat and products thereof (P

art B

)

­­

S. Heidelberg

S. Indiana

S. Kibi

S. Kottbus

S. Mbandaka

S. Orion

S. Saintpaul

S. Thompson

S. Virchow

S. Anatum

Meat from broilers (G

allus

gallus)

­­­

fresh

­­ at processing plant ­

Monitoring

­

­ at processing plant ­

Surveillance (1)

­1

12

215

­ at retail ­ Surveillance

­minced meat

­­­

intended to be eaten cooked ­

­ at processing plant ­

Surveillance

­meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (2)

­1

1

­ at retail ­ Surveillance ­

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (3)

­­ at retail ­ Surveillance ­

carcass

­­­

­ at processing plant ­

Monitoring

­

Ireland 2006 Report on trends and sources of zoonoses

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Page 15: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

­ at processing plant ­

Monitoring (Unspecified)

­

Meat from turkey

­­­

fresh

­­ at processing plant ­

Monitoring

­

­ at processing plant ­

Surveillance (4)

­2

11

meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (5)

­1

­ at retail ­ Surveillance ­

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (6)

­­ at retail ­ Surveillance ­

Meat from duck

­­ at processing plant ­

Monitoring (Not stated M

eat

from

Duck)

­

fresh

­­­

­ at processing plant ­

Surveillance

­

meat products

­­­

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­­ at retail ­ Surveillance ­

Meat from poultry, unspecified­­

­

Ireland 2006 Report on trends and sources of zoonoses

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Page 16: IRELAND - European Food Safety Authority · RABIES 88 2.11.1. General evaluation of the national situation 88 2.11.2. Rabies in humans 88 2.11.3. Lyssavirus (rabies) in animals 89

­ at processing plant ­

Monitoring (Not stated M

eat

from

Poultry Unspecified)

­

meat products

­­­

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance

­cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­

(1) : (C

MCL 3 Tested, 0 Positives) (C

VRL 5955 Tested, 60 Positives)

(2) : (C

MCL 65 Tested, 0 Positives) (C

VRL 2071 Tested, 16 Positives)

(3) : (C

MCL 151 Tested, 0 Positives)(CVRL 3385 Tested, 2 Positives)

(4) : (C

MCL 1 Tested, 0 Positives) (C

VRL 200 Tested, 9 Positives)

(5) : (C

MCL 4 Tested, 0 Positives) (C

VRL 174 Tested, 4 Positives)

(6) : (C

MCL 37 Tested, 0 Positives) (C

VRL 694 Tested, 0 Positives)

Footnote

The sample weight for samples analysed at OFM

Ls and CMCL is usually 25g. N

o sample weight provided for the data subm

itted from

the CVRL. The sample

weight for poultry meat sam

ples taken under the DAF/ FSA

I enhanced poultry monitoring programme varies.

Ireland 2006 Report on trends and sources of zoonoses

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Table Salmonella in milk and dairy products

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

S. Brandenburg

S. Bredeney

S. M

bandaka

Cheeses made from cows' milk ­unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 5 0

Cheeses made from goats' milk ­

soft and semi­soft ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 4 0

Dairy products (excludingcheeses)

­ ­ ­

butter ­ ­ ­­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 10 0

­ at retail ­ Surveillance ­ OFML single 25g 3 0

cream ­ ­ ­­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 6 0

­ at retail ­ Surveillance ­ OFML single 25g 83 0

milk powder and whey powder ­

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 87 0

­ at processing plant ­Surveillance

­ CVRL single NotStated

5564 1 1

ice­cream ­­ at processing plant ­Surveillance

­ DSL single 25g 12 0

­ at processing plant ­Surveillance (Batch of 2)

­ DSL batch 25g 1 0

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 56 0

­ at processing plant ­Surveillance (Batch of 3)

­ DSL batch 25g 1 0

Ireland 2006 Report on trends and sources of zoonoses

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­ at retail ­ Surveillance ­ OFML single 25g 464 0

dairy desserts ­ ­ ­­ at processing plant ­Surveillance

­ DSL single 25g 1 0

­ at retail ­ Surveillance ­ OFML single 25g 37 0

dairy products, not specified ­ ­ ­­ at processing plant ­Surveillance (1)

­ DSL/CVRLsingle Varies 6103 3 2 1

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 18 0

­ at retail ­ Surveillance ­ OFML single 25g 29 0

Milk from other animal speciesor unspecified

­ ­ ­

UHT milk ­ ­ ­­ at processing plant ­Surveillance

­ DSL single 25g 10 0

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 1 0

pasteurised ­ ­ ­­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 1 0

­ at processing plant ­Surveillance

­ CVRL single NotStated

224 0

­ at retail ­ Surveillance ­ OFML single 25g 4 0

raw ­ ­ ­­ at processing plant ­Surveillance

­ CVRL single NotStated

17 0

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 5 0

Cheeses, made fromunspecified milk or otheranimal milk

­ ­ ­

hard ­ ­ ­­ at processing plant ­Surveillance

­ DSL single 25g 30 0

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 40 0

­ at retail ­ Surveillance ­ OFML single 25g 1 0

unspecified ­ ­ ­­ at processing plant ­Surveillance

­ DSL single 25g 97 1 1

­ at processing plant ­Surveillance (Batch of 4)

­ DSL batch 25g 1 0

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 73 0

­ at retail ­ Surveillance ­ OFML single 25g 165 0

soft and semi­soft ­ ­ ­

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­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 17 0

­ at retail ­ Surveillance ­ OFML single 25g 13 0

(1) : (DSL 5 Tested, 0 Positives) (CVRL 6098 Tested, 3 Positives)

Footnote

The sample weight for samples analysed at OFMLs and DSL is usually 25g. No sample weight provided for the datasubmitted from the CVRL.

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Table Salmonella in red meat and products thereof (P

art A

)

­­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella spp.

S. Enteritidis

S. Typhimurium

Salmonella spp., unspecified

S. Anatum

S. Brandenburg

S. Bredeney

S. Hadar

S. Havana

S. Kentucky

S. Dublin

S. Kottbus

S. London

S. Manhattan

S. Mbandaka

S. Nottingham

Meat from pig

­­­

fresh

­­ at processing plant ­

Surveillance (1)

­CMCL/

CVRL

single

Varies

2927

5020

82

81

minced meat

­­­

intended to be eaten cooked ­

­ at processing plant ­

Surveillance

­CMCL

single

25g

21

1

meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (2)

­CMCL/

CVRL

single

Varies

3509

4626

11

11

31

­ at retail ­ Surveillance ­O

FML

single

25g

160

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (3)

­CMCL/

CVRL

single

Varies

5544

0

­ at retail ­ Surveillance ­O

FML

single

25g

927

11

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Meat from bovine animals

­­­

fresh

­­ at processing plant ­

Surveillance (4)

­CMCL/

CVRL

single

Varies

21618

3616

11

11

111

minced meat

­­­

intended to be eaten cooked ­

­ at processing plant ­

Surveillance

­CMCL

single

25g

260

­ at retail ­ Surveillance ­O

FML

single

25g

30

meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (5)

­CMCL/

CVRL

single

Varies

11832

237

112

­ at retail ­ Surveillance ­O

FML

single

25g

100

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (6)

­CMCL/

CVRL

single

Varies

1951

22

­ at retail ­ Surveillance ­O

FML

single

25g

481

0

Meat from sh

eep

­­­

fresh

­­ at processing plant ­

Surveillance (7)

­CMCL/

CVRL

single

Varies

1506

22

­ at retail ­ Surveillance

­OFM

Lsingle

25g

20

minced meat

­intended to be eaten

cooked

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

20

­ at retail ­ Surveillance ­O

FML

single

25g

10

meat products

­­­

cooked, ready­to

­eat

­­­

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­ at processing plant ­

Surveillance (8)

­CMCL/

CVRL

single

Varies

500

­ at retail ­ Surveillance ­O

FML

single

25g

560

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance (9)

­CMCL/

CVRL

single

Varies

727

0

offal

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

20

Other products of animal

origin

­­­

­ at processing plant ­

Surveillance (Edible Fat)

­CVRL

single

Not

Stated

525

32

Meat, red meat (meat from

bovines, pigs, goats, sheep,

horses, donkeys, bison and

water buffalos)

­­­

meat products

­­­

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

10

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

80

Meat from other animal

species or not specified

­­­

­ at processing plant ­

Surveillance (M

eat

unclassified)

­CMCL

single

25g

189

0

fresh

­­­

­ at processing plant ­

Surveillance

­CVRL

single

Not

Stated

2773

215

41

12

1

­ at retail ­ Surveillance

­OFM

Lsingle

25g

20

meat products

­­­

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raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance

­CVRL

single

Not

stated

1269

11

­ at retail ­ Surveillance ­O

FML

single

25g

150

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­CVRL

single

Not

Stated

3541

0

­ at retail ­ Surveillance ­O

FML

single

25g

215

0

minced meat

­­­

intended to be eaten

cooked

­­­

­ at retail ­ Surveillance ­O

FML

single

25g

130

Meat, mixed meat

­­­

meat products

­­­

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­CMCL

single

25g

70

­ at retail ­ Surveillance ­O

FML

single

25g

890

(1) : (C

MCL 19 Tested, 1 Positive) (CVRL 2908 Tested, 49 Positives)

(2) : (C

MCL 145 Tested, 1 Positive) (CVRL 3364 Tested, 45 Positive)

(3) : (C

MCL 171 Tested, 0 Positives) (C

VRL 5373 Tested, 0 Positives)

(4) : (C

MCL 46 Tested, 0 Positives) (C

VRL 21572 Tested, 36 Positives)

(5) : (C

MCL 269 Tested, 12 Positives) (CVRL 11563 Tested, 11 Positives)

(6) : (C

MCL 143 Tested, 0 Positives) (C

VRL 1808 Tested, 2 Positives)

(7) : (C

MCL 19 Tested, 0 Positives) (C

VRL 1487 Tested, 2 Positives)

(8) : (C

MCL 13 Tested, 0 Positives) (C

VRL 37 Tested, 0 Positives)

(9) : (C

MCL 2 Tested, 0 Positives) (C

VRL 725 Tested, 0 Positives)

Footnote

The sample weight for samples analysed at OFM

Ls and CMCL is usually 25g. N

o sample weight provided for the data subm

itted from

the CVRL.

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Table Salmonella in red meat and products thereof (P

art B

)

­­

S. Orion

S. Panama

S. Derby

S. Paratyphi

S. Reading

S. Rissen

S. Senftenberg

S. Bergen

S. Agona

Meat from pig

­­­

fresh

­­ at processing plant ­

Surveillance (1)

­7

4

minced meat

­­­

intended to be eaten cooked ­

­ at processing plant ­

Surveillance

­meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (2)

­10

11

­ at retail ­ Surveillance ­

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (3)

­­ at retail ­ Surveillance ­

Meat from bovine animals

­­­

fresh

­­ at processing plant ­

Surveillance (4)

­1

3

minced meat

­­­

intended to be eaten cooked ­

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­ at processing plant ­

Surveillance

­­ at retail ­ Surveillance ­

meat products

­­­

raw but intended to be eaten

cooked

­

­ at processing plant ­

Surveillance (5)

­2

1

­ at retail ­ Surveillance ­

cooked, ready­to­eat

­­ at processing plant ­

Surveillance (6)

­­ at retail ­ Surveillance ­

Meat from sh

eep

­­­

fresh

­­ at processing plant ­

Surveillance (7)

­

­ at retail ­ Surveillance

­minced meat

­intended to be eaten

cooked

­­­

­ at processing plant ­

Surveillance

­­ at retail ­ Surveillance ­

meat products

­­­

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance (8)

­­ at retail ­ Surveillance ­

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance (9)

­offal

­­­

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­ at processing plant ­

Surveillance

­

Other products of animal

origin

­­­

­ at processing plant ­

Surveillance (Edible Fat)

­1

Meat, red meat (meat from

bovines, pigs, goats, sheep,

horses, donkeys, bison and

water buffalos)

­­­

meat products

­­­

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance

­cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­Meat from other animal

species or not specified

­­­

­ at processing plant ­

Surveillance (M

eat

unclassified)

­

fresh

­­­

­ at processing plant ­

Surveillance

­1

23

1

­ at retail ­ Surveillance

­meat products

­­­

raw but intended to be

eaten cooked

­­­

­ at processing plant ­

Surveillance

­­ at retail ­ Surveillance ­

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­

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­ at retail ­ Surveillance ­

minced meat

­­­

intended to be eaten

cooked

­­­

­ at retail ­ Surveillance ­

Meat, mixed meat

­­­

meat products

­­­

cooked, ready­to

­eat

­­­

­ at processing plant ­

Surveillance

­­ at retail ­ Surveillance ­

(1) : (C

MCL 19 Tested, 1 Positive) (CVRL 2908 Tested, 49 Positives)

(2) : (C

MCL 145 Tested, 1 Positive) (CVRL 3364 Tested, 45 Positive)

(3) : (C

MCL 171 Tested, 0 Positives) (C

VRL 5373 Tested, 0 Positives)

(4) : (C

MCL 46 Tested, 0 Positives) (C

VRL 21572 Tested, 36 Positives)

(5) : (C

MCL 269 Tested, 12 Positives) (CVRL 11563 Tested, 11 Positives)

(6) : (C

MCL 143 Tested, 0 Positives) (C

VRL 1808 Tested, 2 Positives)

(7) : (C

MCL 19 Tested, 0 Positives) (C

VRL 1487 Tested, 2 Positives)

(8) : (C

MCL 13 Tested, 0 Positives) (C

VRL 37 Tested, 0 Positives)

(9) : (C

MCL 2 Tested, 0 Positives) (C

VRL 725 Tested, 0 Positives)

Footnote

The sample weight for samples analysed at OFM

Ls and CMCL is usually 25g. N

o sample weight provided for the data subm

itted from

the CVRL.

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Table Salmonella in other food

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

S. Derby

S. M

bandaka

Eggs ­ ­ ­table eggs ­ ­ ­­ at processing plant ­Surveillance

­ CVRL single NotStated

142 0

­ at retail ­ Surveillance ­ OFML single 25g 6 0

Egg products ­­ at processing plant ­Surveillance (Unspecified)

­ CVRL single NotStated

1042 0

Crustaceans ­unspecified ­ ­ ­­ at processing plant ­Surveillance

­ DCMNR single 25g 5 0

­ at retail ­ Surveillance ­ OFML single 25g 11 0

prawns ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 21 0

lobsters ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Molluscan shellfish ­cooked ­­ at processing plant ­Surveillance

­ DCMNR single 25g 3 0

­ at retail ­ Surveillance ­ OFML single 25g 6 0

raw ­­ at retail ­ Surveillance ­ OFML single 25g 29 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 5 0

Live bivalve molluscs ­mussels ­ ­ ­­ at processing plant ­Surveillance

­ DCMNR single 25g 38 0

oysters ­ ­ ­­ at processing plant ­Surveillance

­ DCMNR single 25g 50 0

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unspecified ­ ­ ­­ at processing plant ­Surveillance

­ DCMNR single 25g 6 0

Sprouted seeds ­ready­to­eat ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

Fruits and vegetables ­ ­ ­­ at processing plant ­Surveillance (Unspecified)

­ CVRL single NotStated

3490 0

products ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 2 0

Juice ­ ­ ­fruit juice ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 21 0

mixed juice ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 1 0

Infant formula ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 144 0

Foodstuffs intended for specialnutritional uses

­ ­ ­

ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 584 0

non­ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 36 0

Fish ­ ­ ­smoked ­ ­ ­­ at processing plant ­Surveillance

­ DCMNR single 25g 13 0

­ at retail ­ Surveillance ­ OFML single 25g 21 0

unspecified ­ ­ ­­ at processing plant ­Surveillance

­ DCMNR single 25g 2 0

­ at retail ­ Surveillance ­ OFML single 25g 44 0

cooked ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 21 0

raw ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 12 0

Fishery products, unspecified ­ ­ ­­ at processing plant ­Surveillance (unspecified)

­ DCMNR single 25g 1 0

cooked ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 26 0

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raw ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 244 0

Other processed food productsand prepared dishes

­ ­ ­

unspecified ­ ­ ­ready­to­eat foods ­ ­ ­­ at processing plant ­Surveillance

­ CVRL single NotStated

5445 1 1

non­ready­to­eat foods ­ ­ ­­ at processing plant ­Surveillance

­ CVRL single NotStated

8564 0

­ at retail ­ Surveillance ­ OFML single 25g 2443 1 1

noodles ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 9 0

pasta ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 115 0

sandwiches ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 648 0

Water ­ ­ ­potable water ­ ­ ­­ at processing plant ­Surveillance

­ CVRL single NotStated

520 0

Mushrooms ­ ­ ­­ at processing plant ­Surveillance

­ CVRL single NotStated

137 0

­ at retail ­ Surveillance ­ OFML single 25g 742 0

Other food ­ ­ ­­ at processing plant ­Surveillance (Unspecified)

­ CVRL single NotStated

3047 1 1

­ at retail ­ Surveillance(Unspecified) (1)

­ OFML single 25g 4 0

Fruits ­ ­ ­pre­cut ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 4 0

products ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 17 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 52 0

Vegetables ­ ­ ­non­precut ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

pre­cut ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 34 0

products ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 33 0

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­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 115 0

Bakery products ­ ­ ­bread ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 17 0

cakes ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 107 0

desserts ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 313 0

pastry ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 76 0

Nuts and nut products ­ ­ ­salted ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 13 0

Soups ­ ­ ­ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 79 0

Spices and herbs ­ ­ ­dried ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 25 0

Sauce and dressings ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 251 0

Cereals and meals ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 179 0

Confectionery products andpastes

­ ­ ­

­ at retail ­ Surveillance ­ OFML single 25g 18 0

Beverages, non­alcoholic ­ ­ ­soft drinks ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 18 0

Chocolate ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Fats and oils (excluding butter) ­ ­ ­

oils ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 7 0

Sweets ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Cocoa and cocoa preparations,coffee and tea

­ ­ ­

­ at retail ­ Surveillance ­ OFML single 25g 9 0

(1) : 3 Additives and 1 Alcohol Tested, 0 Positives

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Footnote

The sample weight for samples analysed at OFMLs and DCMNR is usually 25g. No sample weight provided for the datasubmitted from the CVRL

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2.1.4. Salmonella in animals

Table Salmonella in breeding flocks of Gallus gallus

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

Gallus gallus (fowl) ­ ­ ­parent breeding flocks for eggproduction line

­ NCP flock 10 0 0 0 0

parent breeding flocks formeat production line

­ NCP flock 583 55 0 0 55

parent breeding flocks,unspecified

­ On farmsamplingflock 378 36 0 0 36

Footnote

NCP = National Control Porgramme

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Table Salmonella in other poultry

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

Gallus gallus (fowl) ­ ­ ­laying hens ­during production period ­ NCP flock 340 1 0 1 0

Ducks ­ NCP flock 20 4 0 0 4

Turkeys ­breeding flocks ­ NCP flock 99 0 0 0 0

meat production flocks ­ On farmsamplingflock 76 0 0 0 0

Footnote

NCP = National Control Programme

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Table Salmonella in other birds

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

S. Dublin

Pigeons ­ Diagnostic animal 15 2 0 1 1

Guinea fowl ­ Diagnostic animal 0 0 0 0 0 0

Quails ­ Diagnostic animal 1 0 0 0 0 0

Pheasants ­ Diagnostic animal 12 0 0 0 0 0

Partridges ­ Diagnostic animal 0 0 0 0 0 0

Ostriches ­ Diagnostic animal 0 0 0 0 0 0

Swans ­ ­ ­wild ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 30 1 0 0 1

Peafowl ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ Diagnostic animal 1 0 0 0 0 0

Night herons ­ ­ ­­ Clinical investigations ­ Diagnostic animal 2 0 0 0 0 0

Birds ­ ­ ­wild ­ ­ ­game birds ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 18 0 0 0 0 0

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Table Salmonella in other animals

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

S. Braenderup

S. Derby

S. M

anhatta

n

S. Dublin

Cattle (bovine animals) ­calves (under 1 year) ­ Diagnostic animal 6799 229 0 12 1 0 216

adult cattle over 2 years ­ Diagnostic animal 681 45 0 14 3 1 27

Sheep ­ Diagnostic animal 1044 5 0 0 0 0 0 5

Goats ­ Diagnostic animal 51 1 0 0 0 0 0 1

Pigs ­ Diagnostic animal 310 15 0 5 6 1 3 0 0

Solipeds, domestic ­ Diagnostic animal 111 5 0 5 0 0 0 0

Badgers ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ Diagnostic animal 2 0 0 0 0 0 0 0

Dogs ­ ­ ­pet animals ­ Diagnostic animal 535 1 1

Deer ­ ­ ­wild ­ ­ ­fallow deer ­ Diagnostic animal 12 0 0 0 0 0 0 0

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2.1.5. Salmonella in feedingstuffs

Table Salmonella in feed material of animal origin

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella sp

p.

S. Enteritidis

S. Typhimurium

Salmonella sp

p., unspecified

Feed material of marineanimal origin

­ ­ ­

fish meal ­ single 25g 2 0

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Table Salmonella in other feed matter

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella sp

p.

S. Typhimurium

S. Enteritidis

Salmonella sp

p., unspecified

S. Senftenberg

Feed material of cereal grainorigin

­ ­ ­

barley derived ­ single 25g 11 0

wheat derived ­ single 25g 13 0

maize ­ single 25g 4 0

derived ­ 25g 20 0

other cereal grain derived ­ single 25g 3 0

Feed material of oil seed orfruit origin

­ ­ ­

groundnut derived ­ 0

rape seed derived ­ single 25g 14 0

palm kernel derived ­ single 25g 12 0

soya (bean) derived ­ single 25g 32 1 1

cotton seed derived ­ single 25g 2 0

sunflower seed derived ­ single 25g 9 0

Other feed material ­ ­ ­tubers, roots and similarproducts

­ single 25g 4 0

other seeds and fruits ­ single 25g 3 0

forages and roughages ­ single 25g 1 0

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Table Salmonella in compound feedingstuffs

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Salmonella sp

p.

S. Typhimurium

S. Enteritidis

Salmonella sp

p., unspecified

S. Kentucky

Compound feedingstuffs forcattle

­ ­ ­

final product ­ single 25g 79 0

Compound feedingstuffs forpigs

­ ­ ­

final product ­ single 25g 15 0

Compound feedingstuffs forpoultry (non specified)

­ ­ ­

final product ­ single 25g 6 0

Compound feedingstuffs forpoultry ­ laying hens

­ ­ ­

final product ­ single 25g 15 0

Compund feedingstuffs forpoultry ­ broilers

­ ­ ­

final product ­ single 25g 10 1 1

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2.1.6. Salmonella serovars and phagetype distribution

The methods of collecting, isolating and testing of the Salmonella isolates are described in the chapters aboverespectively for each animal species, foodstuffs and humans. The serotype and phagetype distributions can beused to investigate the sources of the Salmonella infections in humans. Findings of same serovars andphagetypes in human cases and in foodstuffs or animals may indicate that the food category or animal species inquestion serves as a source of human infections. However as information is not available from all potentialsources of infections, conclusions have to be drawn with caution.

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Table Salmonella serovars in animals

Serovars

Other animals ­ Clinical investigations

Cattle (bovine animals)

Pigs

Gallus gallus (fowl)

Other poultry

Sources of isolates (*)

MC

MC

MC

MC

MC

Num

ber of isolates in the laboratory

N=

268

105

Num

ber of isolates serotyped

N=

013

0264

010

15

00

­ Num

ber of isolates per type

S. Alachua

01

00

00

00

S. Braenderup

00

00

01

00

S. Derby

00

00

03

00

S. Dublin

06

0243

00

01

S. Kedougou

00

00

01

00

S. Kentucky

00

00

00

02

S. M

anhattan

01

S. Typhimurium

06

020

05

12

Footnote

(*) M

: Monitoring, C : Clinical

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Table Salmonella serovars in food

Serovars

Meat from other animal species or not specified

Meat from turkey

Other food

Meat from bovine animals

Meat from pig

Meat from broilers (Gallus gallus)

Other poultry

Other products of animal origin

Meat from duck

Meat from sheep

Sources of isolates (*)

MC

MC

MC

MC

MC

MC

MC

MC

MC

MC

Num

ber of isolates in the laboratory

N=

2214

861

9884

38

2

Num

ber of isolates serotyped

N=

180

70

60

580

890

790

00

30

80

20

­ Num

ber of isolates per type

S. Agona

117

S. Anatum

11

1

S. Bergen

1

S. Blockley

1

S. Brandenburg

11

4

S. Bredeney

12

14

22

S. Cerro

2

S. Derby

11

317

31

S. Dublin

23

S. Enteritidis

1

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S. Hadar

31

3

S. Havana

1

S. Heidelberg

11

S. Indiana

1

S. Infantis

21

S. Kentucky

816

S. Kibi

2

S. Kottbus

11

2

S. London

23

S. M

anhattan

2

S. M

bandaka

12

16

S. Nottingham

1

S. Orion

12

S. Panam

a 1

S. Reading

5

S. Rissen

3

S. Saintpaul

1

S. Schwarzengrund

1

S. Senftenberg

1

S. Typhimurium

623

474

22

S. Paratyphi B var. Java

2

S. Paratyphi

23

Footnote

(*) M

: Monitoring, C : Clinical

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Table Salmonella Enteritidis p

hagetypes in animals

Phagetype

Cattle (bovine animals)

Pigs

Gallus gallus (fowl)

Other poultry

Other animals

Sources of isolates (*)

MC

MC

MC

MC

MC

Num

ber of isolates in the laboratory

N=

00

00

00

00

Num

ber of isolates phagetyped

N=

00

00

00

00

00

Footnote

(*) M

: Monitoring, C : Clinical

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Table Salmonella Enteritidis p

hagetypes in food

Phagetype

Meat from bovine animals

Meat from pig

Meat from broilers (Gallus gallus)

Other poultry

Other products of animal origin

Sources of isolates (*)

MC

MC

MC

MC

MC

Num

ber of isolates in the laboratory

N=

1

Num

ber of isolates phagetyped

N=

00

00

00

00

00

Footnote

(*) M

: Monitoring, C : Clinical

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Table Salmonella Typhimurium phagetypes in animals

Phagetype

Cattle (bovine animals)

Pigs

Gallus gallus (fowl)

Other poultry

Other animals ­ Clinical investigations

Sources of isolates (*)

MC

MC

MC

MC

MC

Num

ber of isolates in the laboratory

N=

205

5

Num

ber of isolates phagetyped

N=

015

08

01

00

04

­ Num

ber of isolates per type

DT 104

61

03

DT 104b

21

00

DT 193

02

11

DT 85

60

00

U 288

14

DT 2

Footnote

(*) M

: Monitoring, C : Clinical

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Table Salmonella Typhimurium phagetypes in food

Phagetype

Meat from bovine animals

Meat from pig

Meat from broilers (Gallus gallus)

Other poultry

Other products of animal origin

Meat from duck

Meat from other animal species or not specified

Sources of isolates (*)

MC

MC

MC

MC

MC

MC

MC

Num

ber of isolates in the laboratory

N=

2347

42

26

Num

ber of isolates phagetyped

N=

00

00

00

00

20

20

10

­ Num

ber of isolates per type

DT 104

2

DT 104b

21

Footnote

(*) M

: Monitoring, C : Clinical

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2.1.7. Antimicrobial resistance in Salmonella isolates

Antimicrobial resistance is the ability of certain microorganisms to survive or grow in the presence of a givenconcentration of antimicrobial agent that usually would kill or inhibit the microorganism species in question.Antimicrobial resistant Salmonella strains may be transferred from animals or foodstuffs to humans.

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Table Antimicrobial susceptibility testing of S.Typhimurium in animals

n = Number of resistant isolates

S. TyphimuriumCattle (bovineanimals)

Pigs Gallus gallus (fowl) Turkeys Other animals ­Clinicalinvestigations

Isolates out of a monitoringprogramme Number of isolatesavailable in the laboratory

17 4 1

­Antimicrobials: N n N n N n N n N nTetracyclines

Tetracyclin 16 3 4 4 1 1Amphenicols

Florfenicol 14 10 1 0 1 1Cephalosporins

Cefalexin 2 1 0 0Fluoroquinolones

Enrofloxacin 17 0 4 0 1 1Aminoglycosides

Streptomycin 2 1 1 1Neomycin 15 2 3 3

Trimethoprim + sulfonamidesTrimethoprim +Sulfonamide

17 3 4 4 1 1

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Table Antimicrobial susceptibility testing of Salmonella in animals

n = Number of resistant isolates

Salmonella spp.Cattle (bovineanimals)

Pigs Gallus gallus(fowl)

Turkeys Other animals ­Clinicalinvestigations

Other poultry ­Clinicalinvestigations

Isolates out of a monitoringprogramme Number of isolatesavailable in the laboratory

268 15 0 13 3

­Antimicrobials: N n N n N n N n N n N nTetracyclines

Tetracyclin 220 20 15 12 0 0 13 3 2 1Amphenicols

Florfenicol 218 25 15 2 0 0 13 2 3 0Cephalosporins

Cefalexin 41 4 6 0 3 2 3 0Fluoroquinolones

Enrofloxacin 221 2 15 0 13 0 3 0Aminoglycosides

Streptomycin 41 10 7 7 3 3 3 0Neomycin 169 8 9 4 8 1 3 0

Trimethoprim + sulfonamidesTrimethoprim +Sulfonamide

223 12 15 10 13 1 3 0

Resistant to 1 antimicrobial 26 3 1

Resistant to 2antimicrobials

23 2

Resistant to 3antimicrobials

7 3 2

Resistant to 4antimicrobials

1 2 1

Resistant to >4antimicrobials

2 4 1

Footnote

Under Sulfonamides, the data relates to Trimethoprim+Sulfonamide

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2.2. CAMPYLOBACTERIOSIS

2.2.1. General evaluation of the national situation

2.2.2. Campylobacteriosis in humans

A. Thermophilic Campylobacter in humans

Case definition

Campylobacter infection (Campylobacter sp.) (EU)Clinical descriptionClinical picture compatible with campylobacter infection, i.e. an illness with diarrhoea and/ orvomiting of variable severity which may be accompanied by abdominal cramps and fever**Laboratory criteria for diagnosisIsolation of Campylobacter sp. from any clinical specimenCase classificationPossible: N/ AProbable: A clinically compatible case with an epidemiological link*Confirmed: A clinically compatible case (symptomatic or asymptomatic) that is laboratory confirmed** The description in the EU case definition document has been elaborated upon here

Notification system in place

Notifiable since 2004

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2.2.3. Campylobacter in foodstuffs

Table Campylobacter in poultry meat

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for thermophilic Cam

pylobacter sp

p.

C. coli

C. lari

C. jejuni

C. upsaliensis

thermophilic Cam

pylobacter sp

p., unspecified

Meat from broilers (Gallusgallus)

­

fresh ­­ at retail ­ Surveillance ­ OFML single 25g 6 5 4 1

­ at processing plant ­Monitoring

­ DAF/FSAIsingle Varies 43 4 4

meat products ­ ­ ­raw but intended to be eatencooked

­

­ at processing plant ­Surveillance

­ CMCL single 25g 14 8 8

­ at retail ­ Surveillance ­ OFML single 25g 4 2 2

cooked, ready­to­eat ­­ at processing plant ­Surveillance

­ CMCL single 25g 8 0

­ at retail ­ Surveillance ­ OFML single 25g 464 0

carcass ­ ­ ­­ at processing plant ­Monitoring

­ DAF/FSAIsingle Varies 107 64 64

­ at processing plant ­Monitoring (Unspecified)

­ DAF/FSAIsingle Varies 2 0

Meat from turkey ­fresh ­­ at processing plant ­Monitoring

­ DAF/FSAIsingle Varies 1 0

meat products ­ ­ ­raw but intended to be eatencooked

­

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­ at retail ­ Surveillance ­ OFML single 25g 1 0

cooked, ready­to­eat ­­ at processing plant ­Surveillance

­ CMCL single 25g 4 0

­ at retail ­ Surveillance ­ OFML single 25g 57 0

Meat from duck ­meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 8 0

­ at processing plant ­Monitoring (Unspecified)

­ DAF/FSAIsingle Varies 10 8 8

Meat from poultry, unspecified ­ ­ ­

meat products ­ ­ ­raw but intended to beeaten cooked

­ ­ ­­ at processing plant ­Surveillance

­ CMCL single 25g 13 4 4

cooked, ready­to­eat ­ ­ ­­ at processing plant ­Surveillance

­ CMCL single 25g 8 0

­ at processing plant ­Monitoring (Unspecified)

­ DAF/FSAIsingle Varies 12 12 12

Footnote

The sample weight for samples analysed at OFMLs and CMCL is usually 25g. The sample weight for poultry meatsamples taken under the DAF/ FSAI enhanced poultry monitoring surveillance programme varies.

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Table Campylobacter in other food

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for thermophilic Cam

pylobacter sp

p.

C. jejuni

C. coli

C. upsaliensis

C. lari

thermophilic Cam

pylobacter sp

p., unspecified

Meat from pig ­meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at processing plant ­Surveillance

­ CMCL single 25g 1 0

­ at retail ­ Surveillance ­ OFML single 25g 215 0

raw but intended to beeaten cooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 10 0

Meat from bovine animals ­minced meat ­ ­ ­intended to be eatencooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

meat products ­ ­ ­raw but intended to beeaten cooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 8 0

cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 89 0

Meat from sheep ­fresh ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 12 0

Meat from other animalspecies or not specified

­

meat products ­ ­ ­raw but intended to beeaten cooked

­ ­ ­

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­ at retail ­ Surveillance ­ OFML single 25g 12 0

cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 60 0

minced meat ­ ­ ­intended to be eatencooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 12 0

Meat, mixed meat ­ ­ ­meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 23 0

Cheeses, made fromunspecified milk or otheranimal milk

­ ­ ­

soft and semi­soft ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 7 0

Dairy products (excludingcheeses)

­ ­ ­

butter ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

dairy desserts ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

ice­cream ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

Fish ­ ­ ­cooked ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

raw ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Crustaceans ­ ­ ­prawns ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

Fishery products, unspecified ­ ­ ­cooked ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 9 0

Molluscan shellfish ­ ­ ­raw ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Vegetables ­ ­ ­products ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

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­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 6 0

Soups ­ ­ ­ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 7 0

Bakery products ­ ­ ­cakes ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 4 0

desserts ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

pastry ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Other processed food productsand prepared dishes

­ ­ ­

noodles ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

pasta ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 7 0

sandwiches ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 95 0

unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 61 0

Sauce and dressings ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 30 0

Cereals and meals ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 12 0

Foodstuffs intended for specialnutritional uses

­ ­ ­

non­ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Confectionery products andpastes

­ ­ ­

­ at retail ­ Surveillance ­ OFML single 25g 2 0

Beverages, non­alcoholic ­ ­ ­soft drinks ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

Infant formula ­ ­ ­­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 1 0

Footnote

The sample weight for samples analysed at OFMLs and CMCL is usually 25g.

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2.2.4. Campylobacter in animals

Table Campylobacter in animals

­ ­

Source of information

Sampling unit

Units tested

Total units positive for thermophilic Cam

pylobacter sp

p.

C. jejuni

C. coli

C. lari

C. upsaliensis

thermophilic Cam

pylobacter sp

p., unspecified

C. fetus

Cattle (bovine animals) ­ ­ ­dairy cows ­ animal 0 0 0 0 0 0 0

calves (under 1 year) ­ animal 3756 236 236 0 0 0 0

unspecified ­ ­ ­­ Clinical investigations ­ animal 2048 2 1 1

Sheep ­ animal 611 6 6

Goats ­ animal 36 0

Pigs ­ animal 216 2 2

Solipeds, domestic ­ animal 18 0

Gallus gallus (fowl) ­ ­ ­broilers ­ ­ ­­ at farm ­ animal 192 0

Turkeys ­ animal 37 0

Ducks ­ animal 8 0

Geese ­ animal 10 0

Dogs ­ animal 447 1 1

Cats ­ animal 28 0

Swans ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ animal 20 0

Birds ­ ­ ­wild ­ ­ ­game birds ­ ­ ­­ Clinical investigations ­ animal 25 0

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Footnote

Cattle: Unspecified category is "Foetus"

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2.2.5. Antimicrobial resistance in Campylobacter isolates

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2.3. LISTERIOSIS

2.3.1. General evaluation of the national situation

2.3.2. Listeriosis in humans

A. Listeriosis in humans

Case definition

Listeriosis (Listeria monocytogenes) (EU)Clinical descriptionInfection caused by L. monocytogenes, which may produce any of several clinical syndromes,including stillbirth, listeriosis of the newborn, meningitis, bacteraemia or localised infections.Laboratory criteria for diagnosisIsolation of L. monocytogenes from a normally sterile site (e.g. blood or cerebrospinal fluid or, lesscommonly, joint, pleural or pericardial fluid)Case classificationPossible: N/ AProbable: N/ AConfirmed: A clinically compatible case that is laboratory confirmed

Notification system in place

Notifiable since 2004

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2.3.3. Listeria in foodstuffs

Table Listeria monocytogenes in milk and dairy products

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for L.monocytogenes

Listeria monocytogenes presence in x g

> detection lim

it but =

< 100 cfu/ g

L. m

onocytogenes > 100 cfu/ g

Cheeses made from goats' milk ­ ­

­

unspecified ­ ­

­

­ at retail ­ Surveillance (3) ­ OFML single 25g 2 0

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 2 0 0

Dairy products (excludingcheeses)

­ ­

­

butter (1) ­ OFML ­­­ 25g 2 0 0

­ at processing plant ­Surveillance

­ DSL single 25g 20 3 3

­ at processing plant ­Surveillance (Batch of 5 at1g)

­ DSL batch 1g 1 0

­ at processing plant ­Surveillance (Batch of 5 at25g)

­ DSL batch 25g 51 0

­ at retail ­ Surveillance (6) ­ OFML single 25g 1 0

­ at retail ­ Surveillance((Emumeration only))

­ OFML single 25g 2 0 0

cream ­­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 25 0

­ at retail ­ Surveillance (7) ­ OFML single 25g 18 0

­ at retail ­ Surveillance((Emumeration only))

­ OFML single 25g 26 0 0

dairy desserts ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 7 0

­ at processing plant ­Surveillance (Batch of 5 )

­ DSL batch 25g 10 0

­ at retail ­ Surveillance (8) ­ OFML single 25g 5 2 2 2

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­ at retail ­ Surveillance((Detection andEnumeration, where done))(12)

­ OFML single 25g 5 2 2

­ at retail ­ Surveillance((Enumeration only))

­ OFML single 25g 16 0 0

ice­cream ­ ­

­

­ at processing plant ­Surveillance (Single at 1g)

­ DSL single 1g 2 0

­ at processing plant ­Surveillance (Single at 25g)

­ DSL single 25g 19 1 1

­ at processing plant ­Surveillance (Batch of 3)

­ DSL batch 1g 1 0

­ at processing plant ­Surveillance (Batch of 5 at1g)

­ DSL batch 1g 7 0

­ at processing plant ­Surveillance (Batch of 5 at25g)

­ DSL batch 25g 52 0

­ at retail ­ Surveillance (9) ­ OFML single 25g 90 6 6 1 1

­ at retail ­ Surveillance(Detection andEnumeration, where done.)(13)

­ ­­­

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 71 0 0

milk powder and wheypowder

­ ­

­

­ at processing plant ­Surveillance (Single at 1g)

­ DSL single 1g 7 0

­ at processing plant ­Surveillance (Single at 25g)

­ DSL single 25g 10 0

­ at processing plant ­Surveillance (Batch of 5 at1g)

­ DSL batch 1g 43 0

­ at processing plant ­Surveillance (Batch of 5 at25g)

­ DSL batch 25g 50 0

dairy products, not specified ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 1g 5 0

­ at processing plant ­Surveillance (Batch of 5 at1g)

­ DSL batch 1g 5 0

­ at processing plant ­Surveillance (Batch of 5 at25g)

­ DSL batch 25g 42 0

­ at retail ­ Surveillance (10) ­ OFML single 25g 6 0

­ at retail ­ Surveillance(Emumeration only)

­ OFML single 25g 3 0 0

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Milk from other animal speciesor unspecified

­ ­­

pasteurised ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 11 0

­ at processing plant ­Surveillance (Batch of 5 )

­ DSL batch 25g 21 0

UHT milk ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 10 0

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 3 0

raw ­ ­

­

­ at retail ­ Surveillance (2) ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Emuneration only)

­ OFML single 25g 3 0 0

Cheeses, made fromunspecified milk or otheranimal milk

­ ­

­

soft and semi­soft ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 33 0

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 40 0

­ at retail ­ Surveillance (4) ­ OFML single 25g 7 0

­ at retail ­ Surveillance((Enumeration only))

­ OFML single 25g 5 0 0

hard ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 31 0

­ at processing plant ­Surveillance (Batch of 5 at1g)

­ DSL batch 1g 25 0

­ at processing plant ­Surveillance (Batch of 5 at25g)

­ DSL batch 25g 9 0

unspecified ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 360 70 70

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 179 0

­ at retail ­ Surveillance (5) ­ OFML single 25g 6 3 3 0 0

­ at retail ­ Surveillance((Detection and Enumeration))(11)

­ OFML single 25g 6 3 3 0 0

­ at retail ­ Surveillance((Enumeration only))

­ OFML single 25g 111 0 0

(1) : Error!(2) : Detection and Enumerative (where given) Results(3) : Detection and Enumerative (where given) Results(4) : Detection and Enumerative (where given) Results

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(5) : Detection and Enumerative (where given) Results(6) : Detection and Enumerative (where given) Results(7) : Detection and Enumerative (where given) Results(8) : Detection and Enumerative (where given) Results(9) : Detection and Enumerative (where given) Results(10) : Detection and Enumerative (where given) Results(11) : already entered: error(12) : Already entered: error(13) : Already entered:Error

Footnote

The sample weight for samples analysed at OFMLs is usually 25g. The sample weight for samples analysed at DSL iseither 1g or 25g.

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Table Listeria monocytogenes in other foods

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for L.monocytogenes

Listeria monocytogenes presence in x g

> detection lim

it but =

< 100 cfu/ g

L. m

onocytogenes > 100 cfu/ g

Meat from broilers (Gallusgallus)

­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­­ at processing plant ­Surveillance

­ CMCL single 25g 65 0

­ at retail ­ Surveillance(1)

­ OFML single 25g 104 38 38 0 1

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 545 0 0

raw but intended to beeaten cooked

­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 3 2 2 0

minced meat ­ ­

­

intended to be eatencooked

­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 1 0

Meat from pig ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­­ at processing plant ­Surveillance

­ CMCL single 25g 119 0

­ at retail ­ Surveillance(3)

­ OFML single 25g 97 33 33 1 2

­ at retail ­ Surveillance(enumeration method) (9)

­ OFML single 25g 500 2 499 1

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 3 0

raw but intended to beeaten cooked

­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 11 0

­ at retail ­ Surveillance ­ OFML single 25g 3 0

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 2 0 0

minced meat ­ ­

­

intended to be eatencooked

­ ­

­

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­ at processing plant ­Surveillance

­ CMCL single 25g 1 0

Meat from bovine animals ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­­ at processing plant ­Surveillance

­ CMCL single 25g 18 0

­ at retail ­ Surveillance(4)

­ OFML single 25g 44 7 7 1

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 208 0 0

minced meat ­ ­

­

intended to be eatencooked

­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 2 0

Fish ­ ­

­

smoked ­­ at processing plant ­Surveillance

­ DCMNR single 25g 19 0

­ at retail ­ Surveillance ­ OFML single 25g 7 3 3

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 10 0 0

unspecified ­ ­

­

­ at processing plant ­Surveillance

­ DCMNR single 25g 6 0

­ at retail ­ Surveillance ­ OFML single 25g 2 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 28 0 0

cooked ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 3 1 1

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 6 0 0

raw ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 3 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 3 0 0

Crustaceans ­ ­

­

unspecified ­ ­

­

­ at processing plant ­Surveillance

­ DCMNR single 25g 6 0

Molluscan shellfish ­ ­

­

cooked ­­ at processing plant ­Surveillance

­ DCMNR single 25g 1 0

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 3 0 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 2 2 2 0

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Foodstuffs intended for specialnutritional uses

­

non­ready­to­eat ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 2 0 0

Meat from turkey ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 34 0

­ at retail ­ Surveillance(2)

­ OFML single 25g 12 4 4 0

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 82 0 0

Meat from poultry, unspecified ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 45 0

Meat from sheep ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 1 0

­ at retail ­ Surveillance ­ OFML single 25g 6 0

­ at retail ­ Surveillance(Enumeration only)

­ OFML single 25g 26 0 0

Meat from other animalspecies or not specified

­ ­

­

meat products ­ ­

­

­ at processing plant ­Surveillance (not specified)

­ CMCL single 25g 48 0

cooked, ready­to­eat ­ ­

­

­ at retail ­ Surveillance(5)

­ OFML single 25g 23 6 6 1

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 86 0 0

minced meat ­ ­

­

intended to be eatencooked

­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

Meat, mixed meat ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­ ­

­

­ at processing plant ­Surveillance

­ CMCL single 25g 4 0

­ at retail ­ Surveillance ­ OFML single 25g 10 3 3 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 45 0 0

Fishery products, unspecified ­ ­

­

ready­to­eat ­ ­

­

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­ at processing plant ­Surveillance

­ DCMNR single 25g 2 0

­ at retail ­ Surveillance ­ OFML single 25g 9 4 4 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 129 0 0

­ at processing plant ­Surveillance (unspecified)

­ DCMNR single 25g 1 0

cooked ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 9 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 1 0 0

Meat from duck ­ ­

­

meat products ­ ­

­

cooked, ready­to­eat ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Emumeration only)

­ OFML single 25g 9 0 0

Bakery products ­ ­

­

bread ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 4 0 0

cakes ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 14 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 35 0 0

desserts ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 16 1 1 1

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 122 0 0

pastry ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 19 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 22 0 0

Fruits ­ ­

­

products ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 1 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 6 0 0

pre­cut ­ ­

­

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 4 0 0

Vegetables ­ ­

­

pre­cut ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 23 0 0

products ­ ­

­

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­ at retail ­ Surveillance ­ OFML single 25g 4 2 2 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 20 0 0

­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 2 2 2

non­precut ­ ­

­

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 1 0

Soups ­ ­

­

ready­to­eat ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 4 1 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 54 0 0

Other processed food productsand prepared dishes

­ ­

­

unspecified ­ ­

­

­ at retail ­ Surveillance (6) ­ OFML single 25g 190 61 61 2 1

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 1194 0 0

noodles ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 4 0 0

pasta ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 9 3 3 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 64 0 0

sandwiches ­ ­

­

­ at retail ­ Surveillance (7) ­ OFML single 25g 70 23 23 4 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 115 0 0

Sauce and dressings ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 21 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 151 0 0

Cereals and meals ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 19 4 4 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 82 0 0

Mushrooms ­ ­

­

­ at retail ­ Surveillance (8) ­ OFML single 25g 172 9 9 1

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 284 0 0

Confectionery products andpastes

­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(Enumeration Only)

­ OFML single 25g 7 0 0

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(1) : Result 1: 11 Detected in 25g no quantitative test. Result 2: (</ =100) 25 Detected in 25g and below the detection limit of <20cfu/ g. Result 3: (>100)1 Detected in 25g and above the detection limit of <20cfu/ g.(2) : Result 1: Detected in 25g no quantitative test. Result 2: (</ =100) 3 Detected in 25g and below the detection limit of <20cfu/ g(3) : Result 1: 8 Detected in 25g no quantitative test. Result 2: (</ =100) 19 Detected in 25g and below the detection limit of <20cfu/ g.Result 3: (</ =100) 1 Detected in 25g and above the detection limit of <20cfu/ g.Result 4: (>100) 2 Detected in 25g and above the detection limit of <20cfu/ g.(4) : Result 1: (</ =100) 6 Detected in 25g and above the detection limit of <20cfu/ g.Result 2: (</ =100) 1 Detected in 25g and above the detection limit of <20cfu/ g.(5) : Result 1: (</ =100) 1 Detected in 25g and above the detection limit of <20cfu/ g.Result 2: (</ =100) 3 Detected in 25g and below the detection limit of <20cfu/ g.Result 3: 1 Detected in 25g and no quantitative test.(6) : Result 1: 12 Detected in 25g no quantitative test.Result 2: (</ =100) 42 Detected in 25g and below the detection limit of <20cfu/ g.Result 3: (</ =100) 2 Detected in 25g and above the detection limit of <20cfu/ g.Result 4: (>100) 1 Detected in 25g and above the detection limit <20cfu/ g.(7) : Result 1: Detected in 25g no quantitative test.Result 2: (</ =100) 15 Detected in 25g and bel;ow the detection limit of <20cfu/ g.Result 3: (</ =100) 5 Detected in 25g and above the detection limit of <20cfu/ g.(8) : Result 1: 4 Detected in 25g no quantitative test.Result 2: (</ =100) 3 Detected in 25g and below the detection limit of <20cfu/ g.Result 3: (</ =100) 1 Detected in 25g and above the detection limit of <10cfu/ g.(9) : A positive for quantitative tests was considered to have occured where the result was above the limit of detection of <20cfu/ g. 2 quantitativepositives here with no corresponding qualitative test.Result 1: (</ =100) 498 below the limit of detection of <20cfu/ g. Result 2: (</ =100) 1 above the limit of detection of <20cfu/ g.Result 3: (>100) 1 above the limit of detection of <20cfu/ g.

Footnote

The sample weight for samples analysed at OFMLs, CMCL and DCMNR is usually 25g.

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2.3.4. Listeria in animals

Table Listeria in animals

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Listeria spp.

L. m

onocytogenes

Listeria spp., unspecified

L. ivanovii

Cattle (bovine animals) ­ animal

dairy cows ­ animal 498 0 0 0

calves (under 1 year) ­ ­ ­for slaughter ­ ­ ­­ Clinical investigations ­ animal 6135 7 4 0

unspecified ­ ­ ­­ Clinical investigations (1) ­ animal 2148 36 29 7

Sheep ­ animal 1094 1 1

Goats ­ animal

Pigs ­ animal 312 0

Gallus gallus (fowl) ­ animal 397 0

(1) : In this case the animal species is cattle "foetus"

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2.4. E. COLI INFECTIONS

2.4.1. General evaluation of the national situation

2.4.2. E. Coli Infections in humans

A. Verotoxigenic Escherichia coli infections in humans

Case definition

Enterohaemorrhagic Escherichia coli (E. coli of serogroup known to be toxin producing) (EU)Clinical descriptionClinical picture compatible with enterohaemorrhagic E. coli infection, e.g. diarrhoea (often bloody)and abdominal cramps. Illness may be complicated by haemolytic uraemic syndrome (HUS) orthrombotic thrombocytopenic purpura (TTP). Cases may also be asymptomatic**.Laboratory criteria for diagnosisOne of the following:• Isolation of E. coli belonging to a sero­group known to cause enterohaemorrhagic disease• Serological confirmation in patients with HUS or TTP• For probable cases: detection of genes coding for Stx1/ Stx2 productionCase classificationPossible: N/ AProbable: A laboratory confirmed isolate without clinical information or a case with clinicalsymptoms that has an epidemiological link*Confirmed: A clinically compatible case that is laboratory confirmed** The description in the EU case definition document has been elaborated upon here.

Notification system in place

Notifiable since 2004

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2.4.3. Escherichia coli, pathogenic in foodstuffs

Table VT E. coli in food

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Escherichia coli, pathogenic

E.coli, pathogenic, unspecified

Verotoxigenic E. coli (VTEC)

Verotoxigenic E. coli (VTEC) ­ VTEC O157

Verotoxigenic E. coli (VTEC) ­ VTEC, unspecified

Meat from broilers (Gallusgallus)

­

fresh ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

meat products ­ ­ ­raw but intended to beeaten cooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 13 0

Meat from pig ­fresh ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

minced meat ­ ­ ­intended to be eatencooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 55 0

raw but intended to beeaten cooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 10 0

Meat from bovine animals ­fresh ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

minced meat ­ ­ ­intended to be eatencooked

­ ­ ­

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­ at retail ­ Surveillance ­ OFML single 25g 7 0

meat products ­ ­ ­raw but intended to beeaten cooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 13 0

cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 15 0

Meat from sheep ­fresh ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

Vegetables ­­ at retail ­ Surveillance(Unspecified)

­ OFML single 25g 3 0

Fruits ­products ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

­ at retail ­ Surveillance(unspecified)

­ OFML single 25g 1 0

Meat, mixed meat ­ ­ ­meat products ­ ­ ­cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Meat from other animalspecies or not specified

­ ­ ­

fresh ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 4 0

meat products ­ ­ ­raw but intended to beeaten cooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 13 0

cooked, ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 28 0

minced meat ­ ­ ­intended to be eatencooked

­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 20 0

Milk from other animal speciesor unspecified

­ ­ ­

raw ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Cheeses made from cows' milk ­ ­ ­unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

Cheeses made from goats' milk ­ ­ ­

hard ­ ­ ­

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­ at retail ­ Surveillance ­ OFML single 25g 1 0

Cheeses, made fromunspecified milk or otheranimal milk

­ ­ ­

unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 3 0

Dairy products (excludingcheeses)

­ ­ ­

dairy products, not specified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Fishery products, unspecified ­ ­ ­cooked ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Other processed food productsand prepared dishes

­ ­ ­

unspecified ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 13 0

sandwiches ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 5 0

Bakery products ­ ­ ­cakes ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 2 0

Cereals and meals ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 4 0

Confectionery products andpastes

­ ­ ­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

Sauce and dressings ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 8 0

Soups ­ ­ ­ready­to­eat ­ ­ ­­ at retail ­ Surveillance ­ OFML single 25g 1 0

Footnote

The sample weight for samples analysed at OFMLs is usually 25g.The analytical method used to test samples for VTEC was ISO 16654:2001. This method was able to detect VTECserotype O157 only.

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2.4.4. Escherichia coli, pathogenic in animals

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2.5. TUBERCULOSIS, MYCOBACTERIAL DISEASES

2.5.1. General evaluation of the national situation

2.5.2. Tuberculosis, Mycobacterial Diseases in humans

A. Tuberculosis due to Mycobacterium bovis in humans

Case definition

Tuberculosis (Mycobacterium tuberculosis complex) (EU)Clinical criteria• A clinician’s judgement that clinical and/ or radiological signs and/ or symptoms are compatiblewith tuberculosisand• A clinician’s decision to treat the patient with a full course of anti­tuberculosis therapy.Laboratory criteria for diagnosisOne of the following:• Isolation of M. tuberculosis complex (except M. bovis BCG) from any clinical specimen by culture,• Evidence of acid­fast bacilli (AFB) at microscopic examination of spontaneous or induced sputumCase classificationClassification according to laboratory criteria:Other than definite: A case that meets the clinical criteria above but does not meet the laboratorycriteria of a definite case.Definite: A case with isolation of M. tuberculosis complex (except M. bovis BCG) from any clinicalspecimen. In countries where culture is not routinely available, a case with sputum smearexaminations positive for AFB is also considered to be a definite case.Classification according to the site of disease:Pulmonary tuberculosisTuberculosis of the lung parenchyma or the tracheo­bronchial treeExtrapulmonary tuberculosisTuberculosis affecting any site other than pulmonary as defined aboveClassification according to previous anti­tuberculosis treatment:Never treatedA case who never received a treatment for active tuberculosis in the past or who receivedantituberculosis drugs for less than one month.Previously treatedA case who was diagnosed with active tuberculosis in the past and received anti­tuberculosis drugs(excluding preventive therapy) for at least one month.Case Definitions Version 1.0 Date: 01.01.2004 73

Notification system in place

Tuberculosis notifiable in Ireland since 1948

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2.5.3. Mycobacterium in animals

Table Tuberculosis in other animals

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Mycobacterium

spp.

M. bovis

M. tuberculosis

Mycobacterium

spp., unspecified

Sheep ­ Laboratory animal 4 0 0

Goats ­ Diagnostic animal 4 1 1 0 0

Pigs ­ Diagnostic animal 1 0 0 0 0

Badgers ­ Diagnostic animal 49 28 26 2

Deer ­­ at game handlingestablishment ­ Monitoring

­ Laboratory animal 46 15 15

wild ­ ­ ­fallow deer ­ ­ ­­ Monitoring ­ samplingby industry ­ convenientsampling

­ Diagnostic batch 25 4 4 0

Cats ­ ­ ­pet animals ­ ­ ­­ Clinical investigations ­suspect sampling

­ Daignostic animal 2 1 1 0 0

Dogs ­ ­ ­pet animals ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 1 0 0 0 0

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Table Bovine tuberculosis in countries and regions that do not receive Com

munity co­fin

ancing for

eradication programmes

Region

Total num

ber of

existin

g bovine

Officially free

herds

Infected herds

Routin

e tuberculin

testing

Num

ber of tuberculin

tests carried out

before the

introduction

Num

ber of animals

with

suspicious

lesions of tuberculosis

Num

ber of animals

detected positive in

bacteriological

exam

ination

Herds

Animals

Num

ber of

herds

%

Num

ber of

herds

%

Interval

between

routine

tuberculin

tests (*)

Num

ber of

animals

tested

into the herds (Annex

A(I)(2

)(c) third

indent (1) of

Directive 64/ 432/

EEC)

exam

ined and

subm

itted to

histopathological and

bacteriological

exam

inations

IREL

AND

122392

6260133

118288

96.647

3720

3.039

6260131

4680

3173

Total

122392

6260133

118288

96.647

3720

3.039

6260131

0 4680

3173

Footnote

Footnote 2: (b) tests o

nce a year

(*) L

egend:

In colum

n "Interval between routine tuberculin tests" use the following numeric codes: (0) no routine tests; (1) tests once a year; (2) tests each two years; (3) tests

each three years concerning 24 month­old animals; (4) tests each 4 years; (5) others (please give details).

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2.6. BRUCELLOSIS

2.6.1. General evaluation of the national situation

2.6.2. Brucellosis in humans

A. Brucellosis in humans

Case definition

Brucellosis (Brucella sp.) (EU)Clinical descriptionClinical picture compatible with brucellosis i.e. acute or insidious onset of fever, night sweats, unduefatigue, anorexia, weight loss, headache, or arthralgia.Laboratory criteria for diagnosisOne of the following:• Demonstration of a specific antibody response (four fold or greater rise)*• Demonstration by immunofluorescence of Brucella sp. in a clinical specimen• Isolation of Brucella sp. from a clinical specimenFor probable caseA single high titreCase classificationPossible: N/ AProbable: A clinically compatible case with an epidemiological link,* or a case with an isolated hightitreConfirmed: A clinically compatible case that is laboratory confirmed

Notification system in place

Notifiable since 1948

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2.6.3. Brucella in foodstuffs

2.6.4. Brucella in animals

Table Brucellosis in other animals

­ ­Source of information

Sampling unit

Units tested

Total units positive for Brucella sp

p.

B. m

elitensis

B. abortus

B. suis

Brucella sp

p., unspecified

Pigs ­ Industry animal 4 0 0 0 0

Cattle (bovine animals) ­ ­ ­dairy cows and heifers ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 1970 0 0 0 0 0

Sheep ­ ­ ­animals over 1 year ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 24 0 0 0 0 0

Solipeds, domestic ­ ­ ­horses ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 13 0 0 0 0 0

Badgers ­ ­ ­wild ­ ­ ­­ Clinical investigations ­suspect sampling

­ Diagnostic animal 2 0 0 0 0 0

Foxes ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ Diagnostic animal 1 0 0 0 0 0

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Table Bovine brucellosis ­ data on herds ­ Com

munity co­fin

anced eradication programmes

Region

Total num

berTotal num

ber

of

Num

ber of

herds

Num

ber of

positive

Num

ber of

new

Num

ber of

herds

% positive

herds

Indicators

of herds

herds u

nder

the

programme

checked

herds

positive herds

depopulated

depopulated

% herd

coverage

% positive

herds ­ period

herd prevalence

% new

positive

herds ­ herd

incidence

IREL

AND

122392

122392

118925

132

132

3 2.273

97.167

0.111

0.111

Total

122392

122392

118925

132

132

3 2.273

97.167

0.111

0.111

Total ­ 1

123322

123322

119963

144

144

27

18.75

97.276

0.12

0.12

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Table Bovine brucellosis ­ data on animals ­ Com

munity co­fin

anced eradication programmes

Region

Total num

ber

of animals

Num

ber of

animals to be

Num

ber of

animals

Num

ber of

animals

Num

ber of

positive

Slaughtering

Indicators

tested under

the programme

tested

tested

individually

animals

Num

ber of

animals w

ithpositive result

slaughtered or

culled

Total num

ber of

animals

slaughtered

% coverage at

animal level

% positive

animals ­ animal

prevalence

IREL

AND

6260133

3500000

3500000

3500000

212

212

388

100

0.006

Total

6260133

3500000

3500000

3500000

212

212

388

100

0.006

Total ­ 1

6407456

3516590

3516590

3516590

228

228

2347

100

0.006

Footnote

Note: M

ost of these 212 are false positive/ cross reactions

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Table Bovine brucellosis ­ data on status of herds at the end of the period ­ C

ommunity co­fin

anced

eradication programmes

Region

Status of herds and animals u

nder the programme

Total num

ber of

herds and

Unknown

Not free or not officially free

Free or officially

free su

spended

Free

Officially free

animals u

nder the

programme

Last check positive Last check negative

Herds

Animals

Herds

Animals

Herds

Animals

Herds

Animals

Herds

Animals

Herds

Animals

Herds

Animals

IREL

AND

122392

3500000

0 0

18

1900

7 750

0 0

0 0

122498

6257483

Total

122392

3500000

0 0

18

1900

7 750

0 0

0 0

122498

6257483

Total ­ 1

123322

6407456

0 0

43

3302

6 520

0 0

0 0

123327

6403834

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Ovine or Caprine Brucellosis in countries and regions that do not receive Com

munity co­fin

ancing for

eradication programme

Region

Total num

ber of

existin

g ovine /

caprine

Officially free herds

Infected herds

Surveillance

Investigations of suspect cases

Herds

Animals

Num

ber of herds

%

Num

ber of herds

%

Num

ber of herds

tested

Num

ber of animals

tested

Num

ber of infected

herds

Num

ber of animals

tested with

serological

blood tests

Num

ber of animals

positive serologically

Num

ber of animals

exam

ined microbio

logically

Num

ber of animals

positive microbio

logically

Num

ber of su

spended

herds

IREL

AND

43000

4500000

43000

100

0 0

1400

25446

0 0

0 0

0 0

Total

43000

4500000

43000

100

0 0

1400

25446

0 0

0 0

0 0

Footnote

Ireland is recognised as O

fficially Free of B melitensis and carries o

ut an annual su

rvey to confirm this freedom

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2.7. YERSINIOSIS

2.7.1. General evaluation of the national situation

2.7.2. Yersiniosis in humans

A. Yersinosis in humans

Case definition

Yersiniosis (Yersinia enterocolitica, Yersinia pseudotuberculosis) (EU) Clinical description An illness of variable severity characterised by diarrhoea, fever, nausea, cramps and tenesmus. Laboratory criteria for diagnosis Isolation of Y. enterocolitica or pseudotuberculosis from a clinical specimen Case classification Possible: N/ A Probable: A clinically compatible case with an epidemiological link Confirmed: A case that is laboratory confirmed

Notification system in place

Notifiable since 2004

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2.7.3. Yersinia in foodstuffs

2.7.4. Yersinia in animals

Table Yersinia in animals

­ ­Source of information

Sampling unit

Units tested

Total units positive for Yersinia spp.

Y. enterocolitica

Yersinia spp., unspecified

Y. enterocolitica ­ O:9

Y. enterocolitica ­ O:3

Y. enterocolitica ­ unspecified

Cattle (bovine animals) ­ Diagnostic animal 7069 4 4 0 0 0 4

Sheep ­ animal 1044 0 0 0 0 0 0

Goats ­ animal 51 0 0 0 0 0 0

Pigs ­ animal 310 0 0 0 0 0 0

Solipeds, domestic ­ animal 1111 0 0 0 0 0 0

Poultry, unspecified ­ animal 397 0 0 0 0 0

Dogs ­ animal 535 0 0 0 0 0 0

Cats ­ animal 30 0 0 0 0 0 0

Swans ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ animal 43 1 1 0 0 0 1

Deer ­ ­ ­wild ­ ­ ­fallow deer ­ ­ ­­ Clinical investigations ­ animal 12 0 0 0 0 0 0

Rabbits ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ animal 30 0 0 0 0 0 0

Mice ­ ­ ­wild ­ ­ ­­ Clinical investigations ­ animal 1 0 0 0 0 0 0

Fish ­ ­ ­wild ­ animal 3 0 0 0 0 0 0

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2.8. TRICHINELLOSIS

2.8.1. General evaluation of the national situation

2.8.2. Trichinellosis in humans

2.8.3. Trichinella in animals

Table Trichinella in animals

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Trichinella sp

p.

T. spiralis

Trichinella sp

p., unspecified

Pigs ­fattening pigs ­ ­ ­raised under controlledhousing conditions inintegrated productionsystem

­ official samples single 3743 0

Solipeds, domestic ­horses ­ official samples single 63 0

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2.9. ECHINOCOCCOSIS

2.9.1. General evaluation of the national situation

2.9.2. Echinococcosis in humans

A. Echinococcus spp. in humans

Case definition

Echinococcosis (Echinococcus sp.) (EU)Clinical descriptionClinical picture compatible with echinococcosis, which may produce any of several clinicalsyndromes, varying with cyst size and location.Laboratory criteria for diagnosisOne of the following:• Histopathology• A combination of imaging techniques and serological tests (e.g. indirect haemagglutination,immunodiffusion, immunoblot assay)Case classificationPossible: N/ AProbable: N/ AConfirmed: A clinically compatible case that is laboratory confirmed

Notification system in place

Notifiable since 2004

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2.9.3. Echinococcus in animals

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2.10. TOXOPLASMOSIS

2.10.1. General evaluation of the national situation

2.10.2. Toxoplasmosis in humans

A. Toxoplasmosis in humans

Case definition

Toxoplasmosis (Toxoplasma gondii) (EU) Clinical description A protozoan disease which presents with an acute illness with one or more of the following:lymphadenopathy, encephalitis, chorioretinitis, dysfunction of the central nervous system. Congenitalinfections may also occur with hydrocephalus, microcephalus, intracerebral calcification, convulsions,cerebral retardation. Laboratory criteria for diagnosis One of the following: • Demonstration of a specific toxoplasma antibody response • Demonstration of the agent in body tissues or fluids or isolation in animals or cell culture • Detection of toxoplasma nucleic acid Case classification Possible: N/ A Probable: N/ A Confirmed: A clinically compatible case that is laboratory confirmed Toxoplasmosis (congenital) Clinical description Congenital infection with T. gondii can result in a wide spectrum of clinical manifestations fromasymptomatic or subclinical infection, aseptic meningitis in infancy, to severe multisysteminvolvement with hydrocephalus or microcephaly, chorioretinitis, thrombocytopenic purpura andhepatosplenomegaly. Children with congenital infection, even those with subclinical disease, are also at risk of later reactivation ofchorioretinitis particularly toward the end of the first and into the second decade of life. Laboratory criteria for diagnosis One of the following: • Histologic diagnosis of tachyzoites in infant tissues or body fluids • Isolation of the parasite from an infant, usually from tissue obtained postmortem or on biopsy. (Thisrequires animal or tissue culture inoculation and is not readily available). • Detection of T. gondii by PCR testing of infant blood, CSF or tissue Serologic testing. The serologic diagnosis of congenital toxoplasmosis is confounded both by the passive transfer ofmaternal IgG antibody and the fact that tests for toxoplasma specific IgM antibody can be negative inup to 50% of congenitally infected infants. • Detection of toxoplasma specific IgM antibodies in cord blood or in the infant’s blood is evidence ofspecific antibody synthesis by the infected infant in utero. • Detection of toxoplasma specific IgA antibodies is also highly suggestive of infant infection. Infant levels of toxoplasma specific IgG will normally equal or exceed those of the mother (due to

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active transfer of IgG by the placenta). However IgG levels that are fourfold those of the mother arehighly suggestive of infant infection and demonstration of rising IgG levels in sequential infant sera isconclusive evidence of congenital infection. Case classification Possible: Clinical symptoms compatible with congenital toxoplasmosis Probable: Clinical symptoms suggestive of congenital toxoplasmosis with evidence of recent maternal infection (Maternal toxoplasma IgM positive Confirmed: One of the following: • Detection of T. gondii by PCR testing in the infant • Presence of toxoplasma specific IgM • Rising toxoplasma specific IgG in sequential infant sera

Notification system in place

Notifiable since 2004

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2.10.3. Toxoplasma in animals

Table Toxoplasma in animals

­ ­

Source of information

Sampling unit

Units tested

Total units positive for Toxoplasm

a gondii

Cattle (bovine animals) ­ Diagnostic animal 37 0

Sheep ­ animal 371 66

Goats ­ animal 11 0

Pigs ­ animal 0 0

Solipeds, domestic ­ animal 5 0

Dogs ­ animal 5 0

Cats ­ animal 1 0

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2.11. RABIES

2.11.1. General evaluation of the national situation

2.11.2. Rabies in humans

A. Rabies in humans

Case definition

Rabies (Rabies virus) (EU)Clinical descriptionRabies is an acute encephalomyelitis that almost always progresses to coma or death within 10 daysafter the first symptom.Laboratory criteria for diagnosisOne of the following:• Detection by direct fluorescent antibody of viral antigens in a clinical specimen (preferably the brainor the nerves surrounding hair follicles in the nape of the neck)• Isolation (in cell culture or in a laboratory animal) of rabies virus from saliva, cerebrospinal fluid(CSF), or central nervous system tissue• Identification of a rabies­neutralising antibody titre (complete neutralisation) in the serum or CSF ofan unvaccinated person• Detection of rabies nucleic acid in clinical specimenCase classificationPossible: A clinically compatible case without laboratory confirmationProbable: N/ AConfirmed: A clinically compatible case that is laboratory confirmed

Notification system in place

Notifiable since 1976

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2.11.3. Lyssavirus (rabies) in animals

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2.12. Q­FEVER

2.12.1. General evaluation of the national situation

2.12.2. Coxiella (Q­fever) in animals

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3. INFORMATION ON SPECIFIC INDICATORS OF ANTIMICROBIALRESISTANCE

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3.1. ESCHERICHIA COLI, NON­PATHOGENIC

3.1.1. General evaluation of the national situation

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3.1.2. Antimicrobial resistance in Escherichia coli, non­pathogenic isolates

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Table Antimicrobial susceptibility testing of E. coli in animals

n = Number of resistant isolates

E. coliCattle (bovineanimals)

Pigs Gallus gallus (fowl) Turkeys Other animals ­Clinicalinvestigations

Isolates out of a monitoringprogramme

no no no no no

Number of isolatesavailable in the laboratory

3322 63 33 4 351

­Antimicrobials: N n N n N n N n N nTetracyclines

Tetracyclin 3302 2621 63 58 33 27 4 3 350 199Amphenicols

Chloramphenicol 430 363 2 0 5 3Florfenicol 2798 1209 61 12 32 3 4 0 344 47

CephalosporinsCefalexin 536 208 13 7 16 7 3 1 92 34

FluoroquinolonesEnrofloxacin 2873 982 60 16 33 2 4 0 345 39

AminoglycosidesStreptomycin 107 81 11 10 16 8 3 2 87 50Neomycin 3106 2108 48 31 15 6 1 0 257 112Apramycin 2769 682 50 21 17 1 1 0 258 23Framycetin 3117 444 52 4 16 2 1 0 256 15

PenicillinsAmoxicillin / Clavulanicacid

3310 1111 63 17 29 8 4 1 350 72

Penicillin 540 512 13 13 16 15 3 3 92 85Cloxacillin 432 401 6 6

Trimethoprim + sulfonamidesTrimethoprim +Sulfonamide

2876 2014 61 52 33 17 4 3 345 137

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4. INFORMATION ON SPECIFIC MICROBIOLOGICAL AGENTS

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4.1. HISTAMINE

4.1.1. General evaluation of the national situation

4.1.2. Histamine in foodstuffs

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4.2. ENTEROBACTER SAKAZAKII

4.2.1. General evaluation of the national situation

4.2.2. Enterobacter sakazakii in foodstuffs

Table Enterobacter sakazakii in food

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Enterobacter sakazakii

Infant formula ­ ­

­

­ at retail ­ Surveillance(unspecified)

­ OFML single 25g 139 0

Foodstuffs intended for specialnutritional uses

­ ­

­

non­ready­to­eat ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 13 0

ready­to­eat ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 580 0

Milk, goats' ­ ­

­

­ at retail ­ Surveillance(unspecified)

­ OFML single 25g 1 0

Bakery products ­ ­

­

desserts ­ ­

­

­ at retail ­ Surveillance ­ OFML single 25g 1 0

Dairy products (excludingcheeses)

­ ­

­

milk powder and wheypowder

­ ­

­

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 10g 6 0

Footnote

The sample weight for samples analysed at OFMLs is usually 25g. The sample weight for samples analysed at DSL is10g.

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4.3. STAPHYLOCOCCAL ENTEROTOXINS

4.3.1. General evaluation of the national situation

4.3.2. Staphylococcal enterotoxins in foodstuffs

Table Staphylococcal enterotoxins in food

­ ­

Source of information

Sampling unit

Sample weight

Units tested

Total units positive for Staphylococcal enterotoxins

Cheeses, made fromunspecified milk or otheranimal milk

­ ­

­

unspecified ­ ­

­

­ at processing plant ­Surveillance

­ DSL single 25g 8 4

­ at processing plant ­Surveillance (Batch of 5)

­ DSL batch 25g 17 0

Footnote

The sample weight for samples analysed at OFMLs and DSL is usually 25g.

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5. FOODBORNE OUTBREAKS

Foodborne outbreaks are incidences of two or more human cases of the same disease or infection where thecases are linked or are probably linked to the same food source. Situation, in which the observed human casesexceed the expected number of cases and where a same food source is suspected, is also indicative of afoodborne outbreak.

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Table Foodborne outbreaks in hum

ans

Causative agent

General

outbreak

Household

outbreak

Total Num

ber of

persons

Food im

plicated

Type of

evidence for

implication

of the food

Place where

food was

consum

ed

Contributing

factors

ill (in total)

died

in hospital

Food (sub)category

Suspected as a source

Confirmed as a source

1 2

3 4

5 6

7 8

9 10

Cam

pylobacter

x2

01

not specified

Private

household

Cam

pylobacter

x3

02

not specified

Private

household

Cam

pylobacter ­ C. jejuni

x2

00

not specified

Private

household

Cam

pylobacter ­ Cam

pylobacter sp

p., unspecified

x2

00

not specified

Private

household

Cryptosporidium

x28

00

not specified

Tour group

Escherichia coli, pathogenic ­ V

erotoxigenic E. coli

(VTE

C)

x1

00

not specified

Private

household

Escherichia coli, pathogenic ­ V

erotoxigenic E. coli

(VTE

C)

x1

01

not specified

Private

household

Escherichia coli, pathogenic ­ V

erotoxigenic E. coli

(VTE

C)

x2

02

not specified

Private

household

Escherichia coli, pathogenic ­ V

erotoxigenic E. coli

(VTE

C)

x4

01

not specified

Private

household

Food borne viruses ­ calicivirus (including norovirus)

x9

00

not specified

Group on

training course

Food borne viruses ­ calicivirus (including norovirus)

x18

00

not specified

Residential

institution

Food borne viruses ­ calicivirus (including norovirus)

x60

00

Unknown

Hotel

Salmonella

x2

00

not specified

Private

household

Salmonella

x2

00

not specified

Private

household

Salmonella

x2

01

not specified

Abroad

Salmonella

x5

00

not specified

Abroad

Salmonella

x2

00

not specified

Abroad

Salmonella ­ S. Enteritidis

x4

00

not specified

Abroad

Salmonella ­ S. Enteritidis

x3

01

Chicken curry

xCircum

stantial

Abroad

Salmonella ­ S. Typhimurium

x2

00

not specified

Abroad

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Salmonella ­ S. group D

x3

01

not specified

Abroad

Unknown

x4

00

not specified

Hotel

Unknown

x4

00

not specified

Hotel

Unknown

x5

00

not specified

Private

household

Unknown

x6

00

not specified

Hotel

Unknown

x12

00

not specified

Creche

Unknown

x20

00

not specified

Restaurant

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