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Interfacing Biology and Engineering at the Micro and Nano Scale
March 8th, 2008Institute of Biological Engineering
2008 Annual Conference
Rashid BashirMicro and Nanotechnology Laboratory
Electrical and Computer Engineering & BioEngineeringUniversity of Illinois, Urbana-Champaign
http://libna.micro.uiuc.edu/
2
AcknowledgementsResearchers:• Prof. Demir Akin• Dr. JeongMi Moon• Piyush Bajaj• Vincent Chan• Brian Dorvell• Oguz Elibol• Yi-Shao Liu• Kidong Park• Bobby Reddy• Shuaib Salamat• Murali Venkatesan• Nick Watkins
Recent Alums• Prof. J. Jang, Prof. S. Iqbal, Prof. S.
W. Lee, Prof. L. Yang,
BioVitesse, Inc. Co-Founder
Faculty Collaborators– Prof. A. Alam (ECE, Purdue)– Prof. D. Bergstrom (Med Chem, Purdue)– Prof. A. Bhunia (Food Science, Purdue)– Prof. S. Claire (IU-SOM)– Prof. P. Guo (Vet Medicine, BME, Univ. of
Cincinnati)– Prof. M. Ladisch (Ag& Bio Engr, Purdue) – Prof. M. Toner (Harvard Med School)– Prof. J. P. Robinson (BMS, BME, Purdue)– Prof. W. Rodriguez (Harvard Med School)
Funding Agencies• National Institute of Health, NIBIB• NASA Institute on Nano-electronics and Computing
(INAC)• US Department of Agriculture (Center for Food
Safety Engineering at Purdue)• NSF NSEC at OSU• NIH Nanomedicine NDC
BBBB
On Size and Scale !Fe
atur
e Si
ze
10nm
100nm
1µm
10µm
1nm
0.1nm
100µm
1mm
10mm
100mm
3Bottoms-UpChemical
CNT, QD,NS, NWs, AAO
35nm Feat.of MOS-T
(in 2008)
Gate Insulator
Top-Down Fabrication
MEMS
Mic
roel
ectro
nic
and
ME
MS
Nano-pores
System on A board
System on a chip
Nan
oele
ctro
nics
an
d N
anos
cale
S
enso
rs
Most Bacteria
Virus
ProteinsHelical Turn of DNA
Bottoms-UpBiological
C-C Bond
Ants
Tissue
Organs
Plant and Animal Cells
Evolution of Technologies
4
Modern BiologyBiotechnology
Personalized DNA Sequencers
Molecular Basis of Disease
Probe, alter, and repair individual cells –
Nanomedicine and systems biology
Personalized Implantable Diagnostics and
Therapeutics
Hybrid Biodevices & Organs
Biochip Cartridge
N+N+
YYYYYYYYYYY
YYYYYYYYYYYYY
YY
YY
YY
YY
YY
YY
YY
Silicon
Microparticles
Y Y
YY YY YY
Y Y
YY YY YY Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Nano-pipettesand probes
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Y Y
YY YY YY
Nano-particles
Secreted proteins
hν1
+-
+-
Viral-basedNano-machines
hν3
hν2
55
Research Projects
Micro/Nano-biosensorsand Lab-on-Chip
Cell Biology and Tissue
Engineering
Nanoscale Therapeutics and
Nanomedicine
• 3-D Tissue Engineering with Stereo-Lithography
• Nanomechanics for Cell Biology
• Petri dish on a chip with electrical detection• Cantilevers for virus and bacterial detection• Detection of CD4+ cells from blood• Nanopores for single DNA molecule characterization• Label free field effect silicon sensors for DNA and proteins
• Bacterial Mediated Delivery of Nanoparticles• Macrophage Stealth Delivery of Nanovectors• Phi-29 Nanomotor for Nanomedicine
www.micro.uiuc.edu/LIBNA
6
Microfluidic-based technology platforms for bacterial detection
R. Bashir, ECE, BME A. Bhunia, Food Science M. Ladisch, BME, ABEJ. P. Robinson, BMS, BME
L. MonocytogenesOn a chip
• Rapid detection of live bacteria has wide applications– Industrial Microbiology (Pharmaceutical facility monitoring,
Food Safety)– Blood transfusion– Human Diagnostics– Global Health
• Rapid time to result limited by: – Amplification, enrichment, culture– 48-72 hours for growth and identification
• Center for Food Safety Engineering at Purdue (www.cfse.purdue.edu) through cooperative agreement with USDA-ARS
StartingSample
Sample PrepConcentration
Detection/ID
Data Analysis/Results
Overall Approach
~ 30 min ~ 1- 3 hr
Electrical Detection of cell Growth
On-ChipConcentration
1000X
~ 15 - 30 min
Automated Off-ChipCell Concentration And
Recovery - 1000X
Sample100 – 250 ml
~ 1- 3 hr
Electronic Biomolecular identification
8
Integrated Chips for Study ofMicroorganisms and Cells
“Lab on a Chip” with microfluidics and micro/nanosensors
Glass cover
In/Out ports Cavities/ Wells
Epoxy adhesive
Pin 700µm
Lab-on-a-chip for Detection of Live BacteriaLiu, Park, Li, Huang, Geng,
Bhunia, Ladisch, Bashir
Nanopore Sensors for DNA DetectionChang, Andreadakis, Kosari, Vasmatzis,
Bashir
Dielectrophoresis Filters an Traps for Biological Entities
Li, Akin, Bhunia, Bashir
Micro-Mechanical Cantilevers for Detection
of SporesDavila, Walter, Aronson,
Bashir
Trapping/Lysing of Bacteria/Viruses In
Microfluidic DevicesPark, Akin, Bashir
Nano-Mechanical Cantilever Sensors for Detection of VirusesGupta, Akin, Broyles,
Ladisch, Bashir
Silicon Nanowires and Nanoplates for DNA and
Protein DetectionElibol, Reddy, Nair,
Bergstrom, Alam, Bsahir
Mech/Elect./Optical
DetectionDNA, protein
Cantilevers,NanoFETs , Nano-pores
Cell Lysing
Nano-probeArray
Micro-scaleImpedance
Spectroscopy
ViabilityDetection
Conc.Sorting
On-chipDielectro -phoresis
Fluidic Ports
SelectiveCapture
Ab-based
Capture
MEMSFilters
Filters
hν
9
Overall Detection Scheme
Biotinylated Antibody (C11E9)
SiO2 surface
~14 nm
Streptavidin
Biotinylated BSA
~10 nm
~4 nm
Streptavidin
Biotinylated BSA
~10 nm
~4 nm
* Size information are obtained from Biochemistry 2nd
edition, R. H. Garrett and C. M. Grisham, 1995.
Gomez, Morisette, Bashir, IEEE/ASME JMEMS, 2005Yang, Li, Akin, Huang, Bhunia, Ladisch, Bashir, Lab Chip, 2006
10
Bacterial Growth & Impedance Microbiology !
Invented in late 1800s (Petri and Koch)Still the most widespread means to
grow and detect the presence of bacteria !
# of
bac
teria
Time
Lag phase
Stationary phase
Gro
wth
pha
seEnergy
Metabolism
SugarsOxygen
Na+ATP
OtherProcesses
CO2
Carbonic Acid
H2O
IonChannels
Lactic AcidAcetic Acid
Cell
K+
Na+ ZOwicki et al., Biosens. Bioelectron. (1992)
1.1
1.2
1.3
1.4
1.5
1.6
1.7
0 2 4 6 8 10 12 14 16 18 20 22 24
Time (h)
Cond
uctiv
ity (m
S/c
m)
a
b
c
f
g
e
d
4.0
4.5
5.0
5.5
6.0
6.5
7.0
7.5
0 2 4 6 8 10 12 14 16 18 20 22 24
Time (h)
pH
g f e d c b
a
(A)
(a) no cell, (b) 2.5 x102, (c) 2.39x103, (d) 2.64x104, (e) 2.66x105, (f) 2.65x106, (g) 2.7x107 CFU/ml.
pH
Yang, L, Banada, P., Bhunia, A. Bashir, R., Biotech Bioengr, 2005
Conductivity
11
Petri Dish-on-a-Chip
PC boardw. heater
Wire-bond(with epoxy)
Micro-fluidicTubes
Micro-fluidicTubes
Edge Connector
MicroscopeObjective
BioChip
Measurementelectrodes
DEP captureelectrodes
Outlet Inlet
Measurementelectrodes
DEP captureelectrodes
Outlet Inlet
R. Gomez, D. Morisette, R. Bashir, IEEE/ASME JMEMS, 2005
12
Bacterial Cell Concentration on-Chip
• DEP-based concentration system collects particles from a large flow stream and diverts them to a smaller stream
Inlet
MainOutletDeviation
Outlet
DEP deviation electrodes
DEP electrodes(w. Abs and
growth detection)Fluid and Particles
(low flow)
Fluid only(large flow, no particles)
Fluid and particles
(large flow)
Fluid only(low flow, no
particles)
R. Gomez, D. Morisette, R. Bashir, IEEE/ASME JMEMS, 2005
102 103 104 105 106103
104
105
106
Mag
nitu
de [ Ω
]
Fits to incubation of L. innocua (~3x107 ml-1) in TA4-B6
Ch. 2. Well WB2. 39C.
102 103 104 105 106-60
-50
-40
-30
-20
-10
Frequency [Hz]
Ang
le [D
egre
es]
Meas. (2) 10/16/02. Fit (8) 10/24/02
Time
On-Chip Incubation of L. innocua in LB BrothInitial concentration: ~3x107 cfu/ml
Measured Impedance
Fitted circuit model
Time
On-Chip Incubation of L. Monocytogenes
90%
110%
130%
150%
170%
190%
210%
230%
250%
270%
290%
310%
330%
350%
0 2 4 6 8 10 12 14 16 18 20Time [hours]
Rel
ativ
e Ad
mitt
ance
at 1
00H
z
96%
96%
97%
97%
98%
98%
99%
99%
100%
100%
101%
1 cfu (1) 7/20/0234 cfu (1) 6/25/029 cfu (2) 3/21/02
Approximate number of colony-forming-units (cfu) in a 5.27nl volume:
95%
100%
105%
110%
115%
120%
125%
130%
0 2 4 6 8 10 12 14 16 18 20Time [hours]
Rel
ativ
e C
ondu
ctan
ce
1 cfu9 cfu34 cfu
Approximate number ofcolony-forming-units (cfu)in a 5.27nl volume: Growth
GrowthGrowth
ZwZw ZwZw
Cdi
Rs
Dielectric capacitance
Electrolyteresistance
Electrode-electrolyte interfaces
Electrode-Electrolyte
Interface Model:
Constant-angleimpedance
BjZ nw )(
1ω
=
14
In-process Rapid Detection & Identification of Live CellsBioVitesse, Inc.
• ‘Petri dish on a chip’ to miniaturize impedance microbiology• To quickly and reliably detect and identify live bacteria in 2 to 4 hours, instead of 2 to 10 days• Provides in-process quality control monitoring systems• To the industrial microbiological market (Bio/Pharma and Food Safety)
BioVitesse, Inc. Company Confidential
SiliconBiochip
Chip Cartridge
CCRTM
Cartridge
Automated System
Sample, Media,Sanitizing Fluid
15
Transcription factors:Proteins that control the transcription of specific genes
DNA
mRNA
Proteins
Transcription
Translation
CellDNA
mRNA
Proteins
Transcription
Translation
Cell
DNA – the code of life in all Cells!
http
://w
ww
.chr
omos
ome.
com
/dna
.htm
l
Molecular Biology of the Cell, Alberts, Bray, et al.
16
•α-hemolysin channel, a biological protein based-pore
• Diameter of 2.6 nm.• Translocation of ssDNA using electrophoresis
• Nanoscale coulter counter
Poly-CPoly-A
Nanopores for single DNA molecule characterization
[Service, 2006]
2c/bp x 3e9bp = $60M !
α-hemolysin nanochannel
The model of DNA passing through an α-hemolysin channel.
Kasianowicz et al., 1996, Meller, et. al. 2000.
17
Nanopore FabricationKey steps
• EBL to write dots• TMAH etch• Pore in SOI• Oxidation• Shrinking in TEM
All Images at 1,000,000X. (NPC-2)
Oxide ~800 Å
Oxide ~800 Å
Poly-Si ~1.6 m
ZEP e-beam resist
~80 nm
~80 - 100 nm
230-240 nm
Si 2024Å
BOX 3777 Å
Si Handle layer
Handle layer etched through from back side
Adding DNA Selectivity to Solid State Nanopores
Nanopores with selectivity towards specific targets
Protein Ion Channels
[Kasianowicz et al., 2006]
19
Selective Nanopores Measurements Overview
S. M. Iqbal, D. Akin, R. Bashir, Nature Nanotechnology, April 2007
Time
I b
20Si SiO2
Courtesy of Seyet, LLC
One-base Mismatch Perfect Complementary
21
Single-Base Mismatch Selectivity
• Channel-Molecular Interaction– MM-DNA vs. PC-DNA
• PC-DNA– Interactions with Binding Sites– Faster and More than MM-DNA
• MM-DNA– Electrostatic Friction – Mechanical Resistance– Inability to open HPL
PCMM
Time
I b
XX
X
1 2( )nJ c cτ
= −
S. M. Iqbal, D. Akin, R. Bashir, Nature Nanotechnology, April 2007
22
Channel Interaction Attractive vs. Repulsive Potential
Key Assumptions• PC/HPL: Attractive Potential • MM/HPL: Repulsive Potential• Magnitudes of Potentials • φ span part of the channel
(a) (b)
(a) Attractive potential (b) Repulsive potential, spanning part of the channel
MM PCMM
PC
eφ φττ
−=
23
• Miniature DNA analyzer – Transduction events at single
molecule, nanoscale– Interface to the macroscale – Array of nanopores – serial or
parallel ?– Site selective functionalization
strategy
• Sequencing by digestion– Smaller molecules – bases !– Digest and detect
Nanopore Channel Sensor Array for Characterization of Single Molecules
24
Piezoelectric Driven
Thermal Noise
Spectra
Cantilever Beam Length = 10 µm
Thickness = 30 nm
f0 = 270 kHz
Mass Change DetectionMass Change Detection
Microcantilever Mass Sensors
Unloaded Resonant Frequency :
Spring constant for a rectangular
shaped cantilever beam:
∗=
mkf
π21
0
3
3
4lwEtk =
⎟⎟⎠
⎞⎜⎜⎝
⎛−=∆ 22
12
114 off
kmπ
• k = spring constant• m = mass of cantilever• f0 = unloaded resonant frequency• f1 = loaded resonant frequency
⎟⎟⎠
⎞⎜⎜⎝
⎛−=∆ 22
12
114 off
kmπ
• k = spring constant• m = mass of cantilever• f0 = unloaded resonant frequency• f1 = loaded resonant frequency
Loaded Resonant frequency :
δm is the added massmm
kfδπ +∗
=21
1
25
Nanomechanical Sensors for Viral Detection
Courtesy of Seyet, LLC
A. Gupta, et al. Proc. Nat. Acad. Sci. 2006
Frequency Shift, ∆f = 60 kHz ⇒ Mass change, ∆m = 9 fg ⇒ This corresponds 1 vaccinia virus.
f0 = 1.27 MHz
f1 = 1.21 MHz
Q ~ 5k = 0.006
N/m
∆f=60kHz
Objectives: To develop technology for the rapid detection of virus particles in fluid and air using Nanomechanical Cantilever Sensors
Living Cantilever Arrays
Microfluidic cell culture array
Selective Functionalization on suspended structure
Cantilever Mass Sensing
a b c d
Measuring the growth-rate of a single cell, under various combination of stimuli.
Cantilever mass sensing µ-fluidic cell culture array
L. P. Lee (UCB)
27
Cell Attachment on Cantilevers• DEP Assisted Capture
Hela cells, captured with DEP. Conductive silicon electrode generate DEP forces to
capture Hela cells.
Vac
PDMS Cover
Silicon SOI Substrate
Silicon CantileverIn SOI layer
oxide
Metalcell
DEP Off DEP On
Living Cantilever Arrays
0 hr 8 hr 18 hr
288um2 8um
Volume: 2349 um3
Density3: 1.055g/cc Estimated mass :
2.48 ng33.95KHz
36.68KHzCalculated
Mass: 2.06 ng
29
Living Cantilever Arrays
Point of Test Biosensors
• Focus on translation: Top-down integrated nano-structures and nano-sensors platforms – POC sensors for biomolecules
• Chip makers and diagnostic industry• System level fabrication and modeling/simulations (from ‘molecules to
systems’) with considerations of integrated systems, fluid and biomolecule transport, packaging and interfaces, etc.
Abbott/iSTAT(Glucose)
Accuteck(LDH, Theophylline)
Abbott/iSTAT(gases, ions, markers) Pregnancy Tests
Silicon Based BioChips !• Disposable, one-time-use devices• Rapid, sensitive, integrated• Detection and monitoring of disease and
state of healthNanowire
sensor
DNA or RNAMolecules
Source Drain
Gate
Functionalized Nanosensor Array
Nanowiresensor
DNA or RNAMolecules
Source Drain
Gate
Functionalized Nanosensor Array
Functionalized Nanosensor Array
31
Bio-inspiredMaterials
Diagnostics
Therapeutics
Tissue Engineering
Bio-inspired Fabrication
Bio-Electronics
Apply micro-systems and nanotechnology to develop novel devices and systems that have a biomedical impact or are bio-
inspired
BioMEMS and Bionanotechnology
Micro-devices forCell Biology
Biology, Medicine
Micro & Nanotechnology
and Systems
32
3 µm 4 µm 5 µm 6 µm 7 µm 8 µm 9µmLength of cantilever beam ( µm)
Width of cantilever beam = 1 µm
Thickness of cantilever beam = 10 nm
10 µm3 µm 4 µm 5 µm 6 µm 7 µm 8 µm 9µmLength of cantilever beam ( µm)
Width of cantilever beam = 1 µm
Thickness of cantilever beam = 10 nm
10 µm
Minimum Detectable Mass
The frequency measurement is limited by thermo-mechanical noise on the cantilever beam.
Minimum Detectable Frequency, ∆f,min =
Minimum Detectable Mass, ∆m,min =
kB = Boltzmann constantT = Temperature in KelvinB = Bandwidth measurement, (= 2πf0/2Q)
Q can increase by 100X by driving the cantilevers
kQTBkf
AB
π21 0
43
4541k
mQ
TBkA
effB
Virus Mass Range
Q=5
Q=500
Bacteria
DNA bp ~ 10-21 g100kDa Protein ~ 10-19 g
Roukes, et. al.
34
40nm NPs in KB Cancer Cells
• Bead incubation for 1 hour
• Particles are internalized by cells
• External beads rinsed and quenched by trypan blue dye
One cross-sectionthrough a cell
35
200nm Beads in KB Cells
3-D confocalreconstruction
• Bead incubation for 1 hour
• Confocal images – NPs are NOT internalized
• Cross-sectional scans
One cross-sectionthrough one cell
36
Cell Concentration and Recovery
Chen, et al. Biotech Bioengr, 2005Huang, et al. Submitted, 2007
• Proprietary technology for cell concentration and recovery in small volumes – CCRTM kit
• One-time use filter cartridge• Recovery rates ~ 50%
Ladsich, et al. USDA Review, 2004
Massaged Hotdog Experiment
Automated CCRSystem
37
Recovery Results
Huang, Chen, Ladisch, et al. 2007 (submitted)
100 ml sample in PBST
67.0%0.0±0.0%0.2±0.1%4.0±1.1%3267±153162.8±14.7%3852±123
65.5%0.0±0.0%0.5±0.3%2.9±1.6%3233±80862.2±15.5%4052±122
77.7%0.0±0.0%0.4±0.1%4.9±0.9%3767±60372.4±11.6%4652±121
Total recovery (3 collections)
Leakage through
permeate side
Recovery collection 3
(viable cells)
Recovery collection 2
(viable cells)
Total cells in collection 1
Recovery collection 1
(viable cells)
Final pressure drop (psi)
Initial cell conc.
(cells/ml)
Run#
E. coli
68.2%0.0±0.0%6.0±0.6%25.1±2.6%2303±24337.2±3.9%2866±223
75.9%0.0±0.0%2.3±0.7%13.7±2.4%3717±24460.0±3.9%3066±222
70.2%0.0±0.0%0.9±0.4%12.7±2.4%3510±23656.6±3.8%3166±221
Total recovery (3 collections)
Leakage through
permeate side
Recovery collection 3
(viable cells)
Recovery collection 2
(viable cells)
Total cells in collection 1
Recovery collection 1
(viable cells)
Final pressure drop (psi)
Initial cell conc.
(cells/ml)
Run#
Listeria innocua
65.5%0.0±0.0%2.9±0.5%6.4±0.3%6133±181556.2±16.6%40109±243
56.9%0.0±0.0%2.4±0.3%17.3±0.9%4067±90737.3±8.3%40109±242
61.0%0.0±0.0%1.7±0.3%5.6±2.4%5867±20853.7±1.9%40109±241
Total recovery (3 collections)
Leakage through
permeate side
Recovery collection 3
(viable cells)
Recovery collection 2
(viable cells)
Total cells in collection 1
Recovery collection 1
(viable cells)
Final pressure
drop (psi)
Initial cell conc.
(cells/ml)
Run#
65.5%0.0±0.0%2.9±0.5%6.4±0.3%6133±181556.2±16.6%40109±243
56.9%0.0±0.0%2.4±0.3%17.3±0.9%4067±90737.3±8.3%40109±242
61.0%0.0±0.0%1.7±0.3%5.6±2.4%5867±20853.7±1.9%40109±241
Total recovery (3 collections)
Leakage through
permeate side
Recovery collection 3
(viable cells)
Recovery collection 2
(viable cells)
Total cells in collection 1
Recovery collection 1
(viable cells)
Final pressure
drop (psi)
Initial cell conc.
(cells/ml)
Run#
Streptococcus faecalis
Targeted Nano-therapeutics
Objective:To develop novel means to deliver nano-therapeutics to cancer cells and tumors
• Current drugs are ineffective at penetrating to the tumors due to inadequate vascularization at these tumor sites.
• Nanoparticles have the similar challenge of reaching tumor sites if adequate vascularization does not exist.
• Penetrate multiple barriers
• Need active transport to the cells and tumors
Cancer cells
38
Ferrari, 2005
39
Bacteria as a carrier !
Bacterial Mediated Delivery of Nano-particles in Cells
Objective: To develop biologically-inspired intelligent devices for intracellular monitoring and therapeutic intervention of signal transduction networks
D. Akin, J.P. Robinson, S. Muhammad, A. Bhunia, R. Bashir
• Current drugs are ineffective at penetrating through the solid tumors due to inadequate vascularization at these tumor sites.
• Nanoparticles have the similar challenge of reaching tumor sites if adequate vascularization does not exist since they are carried by blood flow.
• Intracellular bacteria may provide means to penetrate and deliver therapeutic compounds to solid tumors that are otherwise inaccessible to drugs delivered by oral and parenteral routes.
• Bacteria can be engineered to have affinity for certain tumors.• Bacteria can be engineered to express proteins on their surface for therapeutic or
diagnostic intervention
40
Biotinylated-anti-Listeria
monoclonal IgG
bacteria
Biotinylated and rhodamine red
conjugated plasmid DNA encoding GFP
Streptavidin40-nm texas red or
FITC conjugated and streptavidin-coated
nanoparticle
200-nm-FITC conjugated and streptavidin-coated
nanoparticle
I. Bacteria enters the cells via induced
phagocytosis
II. Bacterial toxin causes endosomal compartments to
disintegrate
III. Therapeutic cargo separates from the bacteria and is delivered to the
nucleus
Nucleus
Microbots loaded with nano-particlescarrying therapeutic peptides, antibodies, small molecule drugs, nucleic acid therapeutics
bacteria
bacteria
bacteria
Functionalization Strategy
D. Akin, J. Sturgis, K. Reghab, K. Burkholder, S. Muhammad, A. Bhunia, J. Robinson, R. Bashir, Nature Nanotechnology, 2007
41
Nanoparticles on Bacteria
0
50
100
150
200
250
300
0 0.2 0.4 0.6
Distance (microns)
Gre
y Va
lue
RG
G
R
c d e
hgf
i j
42
Bacterial Mediated Delivery of NP
(d)(a)
1
10
100
1000
0.5hr 1hr 1.5hr 3hr
Incubation Time
Mea
n FL
(FIT
C) Mean FL (200nm)
Cells alone(a)
1
10
100
1000
0.5hr 1hr 1.5hr 3hr
Incubation Time
Mea
n FL
(FIT
C) Mean FL (200nm)
Cells alone
(e)
05
10152025303540
NP mBot
Part
icle
s/ce
ll
05
10152025303540(e)
05
10152025303540
NP mBot
Part
icle
s/ce
ll
05
10152025303540
(c)
(b)
43
Expression of GFP in KB CellsExpression in-vitro in cells Expression in-vitro in mice
D. Akin, J. Sturgis, K. Reghab, K. Burkholder, S. Muhammad, A. Bhunia, J. Robinson, R. Bashir, Nature Nanotechnology, 2007
A. Gupta, D. Akin, R. Bashir, Applied Physics Letters, 2004.A. Gupta, et al. Proc. Nat. Acad. Sci. 2006
Detection of Virus Particles
f0 = 1.27 MHzf1 = 1.21 MHz
Q ~ 5k = 0.006 N/m
∆f=60kHz
• Ultimate Sensitivity ~ 6.3 Hz/ag (in air)• Min. Detectable Mass (Q = 5, ∆f = 40kHz) ~ 6.3fg• Min. Detectable Mass (Q = 500, ∆f = 400Hz) ~ 50ag• Work on going to integrated concentration elements
Work featured in Popular Science, EE Times, Work featured in Popular Science, EE Times, Nature News, and CNBC TV ShowNature News, and CNBC TV Show