Generating Knowledge Networks from Phenotypic Descriptions Background Identification Keys are artifacts created by biologists to identify observed specimen Problems: •Free-text •Need of previous knowledge •Reuse of Entities •Relation between taxon and keys Results Proposed Approach Overview Goal Fagner Leal Pantoja [email protected] Julio Cesar dos Reis [email protected] André Santanchè [email protected] Institute of Computing – UNICAMP, Campinas, SP, Brazil Financial Support:Work partially financed 2 by CNPq (134205/2015-4), FAPESP (2014/14890-0), FAPESP/Cepid in Computational Engineering and Sciences (2013/08293-7), the Microsoft Research FAPESP Virtual Institute (NavScales project), CNPq (MuZOO Project), FAPESP-PRONEX (eScience project), INCT in Web Science, and individual grants from CNPq. Patrícia Cavoto [email protected] Gold-Standard Based Assessment Phenotypes Distinguishing Taxa Taxa Sharing Phenotypes To identify and to explicit the phenotype elements locked in the Identification Keys.

Institute of Computing – UNICAMP, Campinas, SP, Brazilescience-2016.idies.jhu.edu/wp-content/uploads/... · Financial Support:Work partially financed 2 by CNPq (134205/2015-4),

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Page 1: Institute of Computing – UNICAMP, Campinas, SP, Brazilescience-2016.idies.jhu.edu/wp-content/uploads/... · Financial Support:Work partially financed 2 by CNPq (134205/2015-4),

Generating Knowledge Networks fromPhenotypic Descriptions

Background

Identification Keys are artifacts created by biologists to identify observed specimen

Problems:•Free-text•Need of previous knowledge•Reuse of Entities•Relation between taxon and keys

Results

Proposed Approach Overview

Goal

Fagner Leal [email protected]

Julio Cesar dos [email protected]

André Santanchè[email protected]

Institute of Computing – UNICAMP, Campinas, SP, BrazilFinancial Support:Work partially financed 2 by CNPq (134205/2015-4), FAPESP (2014/14890-0), FAPESP/Cepid in Computational Engineering and Sciences (2013/08293-7), the

Microsoft Research FAPESP Virtual Institute (NavScales project), CNPq (MuZOO Project), FAPESP-PRONEX (eScience project), INCT in Web Science,and individual grants from CNPq.

Patrícia [email protected]

Gold-Standard Based Assessment

Phenotypes Distinguishing Taxa Taxa Sharing Phenotypes

To identify and to explicit the phenotype elements locked in the Identification Keys.

mailto:[email protected]