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Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson Ecology

Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

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Page 1: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

Innovations in Newt Survey and

Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy

Paul Franklin

Principal Ecologist – Thomson Ecology

Page 2: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 3: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 4: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 5: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 6: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 7: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 8: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

“See, Frank? Keep the light in their eyes and you can bag them without any trouble at all”

Page 9: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 10: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

• eDNA is better than traditional methods for detecting the presence of great crested newts

• eDNA samples are far less time consuming to collect than traditional methods and results are rapid

• eDNA is more cost effective than conventional methods if GCN absent

Page 11: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

The methodology for eDNA sampling must follow the technical advice note: Defra Science and Research Project WC1067

Page 12: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 13: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

For great crested newts technique can be used between April 15th and June 30th (Natural England Guidance 2015)

Page 14: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 15: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson
Page 16: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

Species for which eDNA method has been tested

Great Crested NewtPonds – 91 to 99%

OstrichSoil – 14%

European WeatherfishPonds/Ditches – 75 to 100%

European Pond TerrapinPonds – 60 to 100%

Eurasian OtterRivers/Streams – 27%

Red Swamp CrayfishPonds – 73%

Page 17: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

Using eDNA metabarcoding a list of species can be generated from an eDNA sample

Page 18: Innovations in Newt Survey and Collaboration on Environmental DNA (eDNA) Applications in Ecological Consultancy Paul Franklin Principal Ecologist – Thomson

Future Applications for the use of eDNA in Ecological Consultancy

•Presence / likely absence survey for other protected species e.g. otter, water vole, fish, invertebrates

•Rapid biodiversity assessment of aquatic ecosystems e.g. species lists for fish and invertebrates

•Detection of invasive species e.g. aquatic plants, fish, crayfish

•Water quality monitoring through detection of sensitive invertebrate organisms e.g. stonefly and mayfly

•Rare species population monitoring

•Monitoring the impacts of environmental change