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Division of BioTherapeutics Leiden Academic Centre for Drug Research (LACDR) CMC Strategy Forum Europe Noordwijk May 15, 2018 Wim Jiskoot Immunogenicity of protein aggregates: does size matter?

Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

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Page 1: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Division of BioTherapeutics Leiden Academic Centre for Drug Research (LACDR) CMC Strategy

Forum Europe Noordwijk

May 15, 2018

Wim Jiskoot

Immunogenicity of protein aggregates:

does size matter?

Page 2: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Factors influencing protein immunogenicity

Page 3: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Administration of particle-free foreign protein induces immunological tolerance in animals and human patients

For instance:

Dresser, Immunology 5, 378 (1962)

Claman, J Immunol 91, 833-839 (1963)

Biro & Garcia, Immunology 8, 411-419 (1965)

Spiegelberg & Weigle, Int Arch Allergy 31, 559-567 (1967)

Cerottini et al., J Exp Med 130, 1093-1105 (1969)

Golub & Weigle, J Immunol 102, 389-396 (1969)

Weksler et al., J Clin Invest 49, 1589-1595 (1970)

Von Felten & Weigle, Cellular Immunology 18, 31-40 (1975)

Fujiwara et al., Jpn J Microbiol 20, 141-146 (1976)

Since the 1960s!

Decades of studies suggest that aggregates and particles may contribute to immunogenicity

Page 4: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Some of the article section headings:

Page 5: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Aggregate size and immunogenicity – is there a link?

Aggregate size range: 6 orders of magnitude!

Page 6: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Subvisible particle counts and rhIFNβ immunogenicity

0.75

-1 1-2

2-4

4-6

6-8

8-10

10-1

5

15-2

0

20-3

0>3

0

0

2

4

6

8

10

12

14Bulk

Reformulated

Stressed

Size range (µm)

Part

icle

co

un

t /

mg

pro

tein

(x 1

05)

• Virtually particle-free rhIFNβ-1a is non-immunogenic

• Immunogenicity in transgenic immune tolerant mice correlates with subvisible particle counts (rather than total % aggregates)

van Beers et al., Pharm Res 27: 1812-1824 (2010)

0.75

-1 1-2

2-4

4-6

6-8

8-10

10-1

5

15-2

0

20-3

0>3

0

0

2

4

6

8

10

12

14Bulk

Reformulated

Stressed

Size range (µm)

Part

icle

co

un

t /

mg

pro

tein

(x 1

05) Immunogenicity in transgenic mice

% R

esp

on

der

s

MFI analysis

Page 7: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Aggregate size and monoclonal IgG1 immunogenicity

Size

Immunogenicity

Nano and micro?

Bessa et al., Pharm Res 2015

Page 8: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Caveat: Native-like vs Denatured !

Aggregate size and monoclonal IgG immunogenicity

Oligo

Micro Micro

Size Immunogenicity

Fathallah et al., J Pharm Sci 2015

Page 9: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

In vivo?

Aggregate size and monoclonal IgG1 immunogenicity

Size

Immunogenicity

Telikepalli et al., J Pharm Sci 2015

Page 10: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Unpublished study

Impact of size of murine monoclonal antibody

aggregates on their immunogenicity upon

subcutaneous administration in mice

Grzegorz Kijanka, Jared S. Bee, Samuel A. Korman,

Xu Liu, Yuling Wu, Lorin K Roskos,

Mark A. Schenerman, Wim Jiskoot

Page 11: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Experimental set-up

Aggregation Fractionation 1. Centrifugation 2. GPC

Fractionation: stressed monomers, oligomers, nano-sized aggregates, micron-sized aggregates

Characterization: SEC, SDS-PAGE, Western blotting, DLS, NTA, MFI, fluorescence, CD, MS

Immunization protocol: 2 subcutaneous injections/week, 8 weeks, 10 µg protein/injection

Anti-drug antibody detection

Stress protocol: pH 4.6, 65˚C, 30-60 min + stirring (700 rpm, 30 min)

Murine monoclonal IgG1

Page 12: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Aggregate characteristics

mIgG structure in aggregates altered, not fully denatured

CD Trp fluorescence

Bis-ANS fluorescence

Kijanka et al., unpublished data

Page 13: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Aggregate characteristics

Mainly non-covalent, few covalent aggregates

Non-reducing Reducing

Kijanka et al., unpublished data

SDS-PAGE

Page 14: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Aggregate characteristics

Epitopes preserved on aggregates Kijanka et al., unpublished data

Western blotting & dot blotting

Page 15: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Aggregate characteristics

SEC NTA

MFI

~ 15 MDa (100-mers)

Kijanka et al., unpublished data

Page 16: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Immunogenicity

Nano-sized aggregates were the most immunogenic

Kijanka et al., unpublished data

Anti-drug antibodies Antibody isotypes

In positive sera, IgG2a and IgG2b were detected (IgG1 was not measured)

Page 17: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Follow-up study: are dimers immunogenic?

Preparation of dimers by three different stress methods:

• pH – pH 2.5, 1 hour, ambient temperature

• Temperature – 65 ˚C, 10 minutes

• Light stress – cool white light (13.73 klux) and UV (10.68 W/m2), 96 h

Dimers isolated by SEC (High Load Superdex 200 PG)

Page 18: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Characterization of dimers: HP-SEC

Fractions successfully enriched in dimers

Page 19: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Characterization of dimers: far-UV CD

pH

200 220 240-6000

-4000

-2000

0

2000

4000Unstressed

Dimers

Monomers

[nm]

[ ]

MR

E

Temp

200 220 240-6000

-4000

-2000

0

2000

4000Unstressed

Dimers

Monomers

[nm]

[ ]

MR

E

UV

200 220 240-6000

-4000

-2000

0

2000

4000Unstressed

Dimers

Monomers

[nm]

[ ]

MR

E

Secondary structure (almost) unaltered

Page 20: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Characterization of dimers: Trp fluorescence

Fluorescence intensity reduced in UV stressed mAb

pH

320 340 360 380 4000

50000

100000

150000Unstressed

Dimers

Monomers

[nm]

Flu

ore

scen

ce in

ten

sit

y

Temp

320 340 360 380 4000

50000

100000

150000Unstressed

Dimers

Monomers

[nm]

Flu

ore

scen

ce in

ten

sit

y

UV

320 340 360 380 4000

50000

100000

150000Unstressed

Dimers

Monomers

[nm]

Flu

ore

scen

ce in

ten

sit

y

Page 21: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Immunogenicity

ADA day 65

Unst

ress

ed

pH D

imer

pH M

onomer

Temp D

imer

Temp M

onomer

UV D

imer

UV M

onomer

Supernat

ant 3

0

1

2

3

6

8

10

12

S/B

Dimers are not immunogenic in our mouse model

Page 22: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Conclusion: size matters!

• In our mouse model, nano-sized aggregates are more immunogenic than micron-sized aggregates or oligomers

• Dimers are not immunogenic in the same mouse model

• But, there is more than size alone…. other aggregate attributes may be equally (or more) important

For comparison:

• Collective studies from the vaccine delivery literature suggest nanoparticles between 20 nm and a few hundred nm to be the most effective particulate adjuvants

• But, different types of nanoparticles have widely different levels of adjuvant activity

Page 23: Immunogenicity of protein aggregates: does size matter? · Immunogenicity of protein aggregates: does size matter? Factors influencing protein immunogenicity . Administration of particle-free

Andhyk Halim

Andrea Hawe

Daan Crommelin

Daniel Weinbuch

Grzegorz Kijanka

Huub Schellekens

Jared Bee & collegues

John Carpenter

Linda Narhi

Mark Fogg

Matthew Baker

Melody Sauerborn

Miranda Van Beers

Riccardo Torosantucci

Suzanne Hermeling

Ted Randolph Vasco Filipe Vera Brinks