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rh Lecture 7 Slides

Great new Krebs cycle (Citric Acid cycle) movie…

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Great new Krebs cycle (Citric Acid cycle) movie…. http:// www.youtube.com/watch?v =A1DjTM1qnPM. fig 16-13. Krebs cycle features and functions …. fig 16-13. O. CH 3 -C. O -. O. O. CH 3 -C. CH 3 -C. it’s all about acetate…. acetate. acetyl group. acetyl coenzyme A or acetyl-CoA. - PowerPoint PPT Presentation

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Page 1: Great new Krebs cycle (Citric Acid cycle) movie…

rh

Lecture 7 Slides

Page 2: Great new Krebs cycle (Citric Acid cycle) movie…

Great new Krebs cycle (Citric Acid cycle) movie…

fig 16-13

http://www.youtube.com/watch?v=A1DjTM1qnPM

Page 3: Great new Krebs cycle (Citric Acid cycle) movie…

Krebs cyclefeatures andfunctions…

fig 16-13

Page 4: Great new Krebs cycle (Citric Acid cycle) movie…

CH3-CO

O-

CH3-CO

acetate

acetyl group

S-CoA

AcCoA

acetyl coenzyme Aor

acetyl-CoA

CH3-CO

it’s all about acetate…

rh

Page 5: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-1

all roads lead to acetyl-CoA…

Page 6: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-1

electrons from acetyl groups

Page 7: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-1

energy from electrons

Page 8: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-3

This is HS-CoA, or CoA-SH, CoA, or coenzyme A

Page 9: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-3

This is HS-CoA, or CoA-SH, CoA, or coenzyme A

CoA-SH, or HS-CoA, or CoA

Page 10: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-2

where the acetyl groups come from

pyruvate dehydrogenase: PDH

Page 11: Great new Krebs cycle (Citric Acid cycle) movie…

fig 14-13

Thiamine pyrophosphate (TPP): an activated carbon

Page 12: Great new Krebs cycle (Citric Acid cycle) movie…

fig 14-13

TPP as a carbanionnucleophile in pyruvate metabolism

Page 13: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-4

The “business end” of PDH

Lipoic acid cofactor of PDH E2

Page 14: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-5

The PDH complex approx. 4.5 x 106 MW

Page 15: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-5

The PDH complex

Page 16: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-6 (old)

The PDH catalyticcycle

oxidation of pyruvate

Page 17: Great new Krebs cycle (Citric Acid cycle) movie…

Several reactions, one basic location

fig16-6

Page 18: Great new Krebs cycle (Citric Acid cycle) movie…

Please read and LEARN

“The Name Game”

Page 19: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-7

The:Krebs cyclecitric acid cycleTCA cycle

Page 20: Great new Krebs cycle (Citric Acid cycle) movie…

fig 16-8

Citrate synthase and its substrates…

Page 21: Great new Krebs cycle (Citric Acid cycle) movie…

pg 622

Getting fresh carbons into the act

why it’s called the citric acid cycle

Page 22: Great new Krebs cycle (Citric Acid cycle) movie…

pg 622

making citrate asymmetric

remember this for later…

Page 23: Great new Krebs cycle (Citric Acid cycle) movie…

fig16-10

an iron-sulfer cluster in aconitase

Page 24: Great new Krebs cycle (Citric Acid cycle) movie…

pg 624 (less fancy picture)

electrons!

NADH is the main carrier ofKrebs cycle-derived electrons

Page 25: Great new Krebs cycle (Citric Acid cycle) movie…

pg 625

more electrons!

note CoA-SH has re-entered the picture

Page 26: Great new Krebs cycle (Citric Acid cycle) movie…

pg 626

direct production of a high energy phosphate

but not ATP…instead it’s GTP

Page 27: Great new Krebs cycle (Citric Acid cycle) movie…

pg 626

direct production of a high energy phosphate

but not ATP…instead it’s GTP

Page 28: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

electrons to FAD instead of NAD+

Page 29: Great new Krebs cycle (Citric Acid cycle) movie…

rh

The business end of FAD or FMN

isoalloxazinering

Page 30: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

electrons to FAD instead of NAD+

Page 31: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

a sensible inhibitor of succinate dehydrogenase

INHIBITOR

Page 32: Great new Krebs cycle (Citric Acid cycle) movie…

old pg 612

Hydration of fumarate

Page 33: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

Hydration of fumarate

Page 34: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

high specificity exemplified by substrates and productsof fumarase

substrate

product

not asubstrate

Page 35: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

high specificity exemplified by substrates and productsof fumarase

not aproduct

substrate

product

Page 36: Great new Krebs cycle (Citric Acid cycle) movie…

pg 628

the final electron removal

Page 37: Great new Krebs cycle (Citric Acid cycle) movie…

Krebs cyclefeatures andfunctions…

fig 16-13