GO Annotation from different sources

EXAMPLES: public databases (eg. NCBI, UniProtKB) genome browsers (eg. Ensembl) array vendors (eg. Affymetrix)

CONSIDERATIONS: What is the original source? When was it last updated? Are evidence codes displayed?

Secondary Sources of GO annotation

C. Obtaining GO annotations from Secondary Sources

AIM: Look at how different public resources and tools display GO.

GO annotation obtained for chick GAPDH (P00356) from different sources:

QuickGO (primary source) UniProtKB database NCBI Entrez Gene page Ensembl browser Affymetrix chick array g:profiler gene expression analysis tool

QuickGO

1.

2.

Comparison of Chicken GAPDH GO annotation obtained from different sources.

GO evidence codes not reported.