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G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

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Page 1: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

G_CaL vs. k_naca

Eli CohenJosue Cordones

Sviatoslav KendallCMACS Workshop 2013

Page 2: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Knaca: Sodium/Calcium Exchanger

• Expels one Calcium ion (Ca2+) from the cell by pulling in three Sodium ions (Na+)

• Net effect: inside of the cell becomes more positive with each turn

• Restores calcium concentration after action potential

Page 3: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Gcal: Maximal Calcium Conductance

• Directly proportional to L-type Calcium current (Ical)

• [insert equation]

• Affects slow, inward current that serves to sustain action potential

Page 4: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013
Page 5: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Predictions:

• High Gcal values should give long action potentials

• Low Knaca values should also give long action potentials

• Longest action potentials should be seen with high Gcal and low Knaca

Page 6: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Methods:

Page 7: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Methods…

Page 8: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Results

• Spiral seemed to always migrate leftward• No apparent trend in either the paths or the

spirals. In all cases if undisturbed the spiral would eventually migrate off the screen.

• No apparent difference between Day 1 and Day 2

Page 9: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Day 1 Paths

Page 10: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Day 2 Spirals

Page 11: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Comparison of Close-upsDay 1 Day 2

Page 12: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Action Potential at the Extremes

(0.2, 1.8)

(0.2, 0.2)

(1.8, 1.8)

(1.8, 0.2)

Page 13: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Insights

• Changing parameters may have affected the path of the spiral tip.

• Maybe not…could be that it’s not the values of the parameters that affects the path, rather the position of spiral when changing values serves as initial conditions for the new set of parameters.

• But…if that’s true, that means the new set of parameters does have some effect on the spiral, but we couldn’t find a trend.

Page 14: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Undisturbed at (1.0, 1.0)

Page 15: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Action Potential at the Extremes

(0.2, 1.8)

(0.2, 0.2)

(1.8, 1.8)

(1.8, 0.2)

Page 16: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Future…

Page 17: G_CaL vs. k_naca Eli Cohen Josue Cordones Sviatoslav Kendall CMACS Workshop 2013

Acknowledgements (check spelling)

• Flavio Fenton, • Robert Gilmour,• Bard Ermentrout, • Nancy Griffeth for putting it all together • Aaron Wolinetz for logistical/moral support

(food/jokes)• Chuck, Rachel & Daniel for being there• Peter for his programming prowess