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From Gene to ProteinFrom Gene to Protein
Genes code for...Genes code for...
Proteins
RNAs
Remember...Remember...
a protein is made of monomers called amino acids
amino acids bond together to form a polypeptide - the primary structure of a protein
DNA vs RNADNA vs RNA
Gene expression is Gene expression is accomplished through two accomplished through two
basic processes...basic processes...Transcription = DNA to mRNA
Translation = mRNA to a polypeptide
Some of the RNAs Some of the RNAs involved in gene involved in gene
expression...expression...
mRNA (messenger)
tRNA (transfer)
rRNA (ribosomal)
TranscriptionTranscriptionTranscription factors bind to the TATA box on the DNA strand
RNA polymerase pries the two strands of DNA apart
RNA polymerase joins RNA nucleotides together that are complementary to the DNA template
RNA polymerase works only in the 5' to 3' direction - just like DNA polymerase
TranslationTranslation
mRNA transcript is brought to the ribosome
Initiation = the rRNA, mRNA transcript, and tRNA carrying methionine bind together
Elongation = amino acids are added one by one to create the polypeptide
Termination = when a stop codon is reached on the mRNA
tRNA
What two processes ensure that the correct amino acid is added to a growing
polypeptide chain?
There are 64 codons. Three are stop codons, so we can say there are 61 amino acid coding codons. However, there are only 45 tRNA molecules that exist. How is this possible?
The need for The need for molecular molecular
recognition... recognition...
Pairing of the tRNA anticodon and mRNA codon, but wobble allows for some mistakes
Pairing of the tRNA with the amino acid, accomplished by aminoacyl-tRNA synthetases
The Genetic CodeThe Genetic Code
mRNA is read three bases at a time
3 mRNA bases = a codon
The Genetic CodeThe Genetic Code
The Genetic CodeThe Genetic Code
RibosomesRibosomes
Bring mRNA and tRNAs together
3 sites = A, P, and E
P= holds the tRNA that is attached to the growing polypeptide chain
A = holds the tRNA carrying the next amino acid to be added to the chain
E = is where discharged tRNAs leave the ribosome
How can human cells make 75,000- 100,000 different proteins, given that there are about 20,000 human genes?
Transcript ProcessingTranscript Processing
5' Cap and Poly A Tail5' Cap and Poly A Tail
5' Cap and Poly A tail5' Cap and Poly A tail
Facilitate the export on mRNA from the nucleus
Help protect the mRNA from degradation from hydrolysis enzymes in the cytoplasm
Help ribosomes attach to the 5' end of the mRNA prior to translation
RNA SplicingRNA Splicing
The average transcription unit is 27,000 bases long.
The average protein is 400 amino acids long, requiring only 1,200 RNA bases.
This means that most mRNA transcripts are initially too long and contain a lot of non-coding segments.
RNA Splicing RNA Splicing continued...continued...
Non-coding segments (introns) of the mRNA transcript are dispersed among the coding segments (exons)
Introns are removed from the mRNA transcript prior to it leaving the nucleus.
This forms a mRNA transcript with a continuous coding sequence
RNA Splicing RNA Splicing continued...continued...
The signal for RNA splicing is a short nucleotide sequence at each end of an intron
snRNPs (small nuclear ribonucleoproteins) recognize these sequences
SplicesomesSplicesomes
Includes multiple snRNPs and proteins
Cuts out introns and pastes together exons
A Note...A Note...A single gene can code for more than one type of polypeptide
This is because of alternative RNA splicing
Whether mRNA segments are treated as introns or exons depends on the polypeptide product being expressed
For this reason the number of protein products an organism produces can be much greater than its number of genes
Mutations!Mutations!The ultimate source of new genes and, therefore, genetic diversity.
Types of mutations...Types of mutations...
Mutations are caused Mutations are caused by...by...
Physical mutagens (e.g. radiation)
Chemical mutagens (e.g. tobacco)
Chemical mutagens that cause cancer are called carcinogens
Exposure to mutagens increases over an organism's lifetime
So, what is a gene?So, what is a gene?
A discrete unit of inheritance that affects phenotype
A specific segment of a chromosome
A specific nucleotide sequence on a DNA molecule
A DNA sequence that codes for a specific polypeptide product
Let's use...Let's use...
Gene = a region of DNA that can be expressed to produce a final functional product that is either a polypeptide or an RNA molecule
MutationsMutations
Silent mutations do not change what the gene expresses
Frameshift mutations can change what, if anything, the gene expresses
Exit SlipExit Slip
How are transcription and translation similar? How are they different?