10
Anti-strep binding Anti-strep binding GFP Expression GFP Expression MOCK Epi-GV-strep Figure S1. out in Epithin/ PRSS14 VP16 GAL4 149 55 1 44 Strep tag Epi-GV-strep A B

Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

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Page 1: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

Anti-strep binding Anti-strep binding

GF

P E

xpre

ssio

n

GF

P E

xpre

ssio

n

MOCK Epi-GV-strep

Figure S1.

out

in

Epithin/PRSS14

VP16GAL4

149

55

144

Strep tag

Epi-GV-strep

A B

Page 2: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

A

BOriginal Image

Mean Fluorescence> Threshold

Mean Fluorescence< Threshold

Binary Image(EICD positive region)

C

D

0

5

10

15

20

25

30

35

40

Epi-2

PMA - + - + - +

Epi-1ControlsiRNA

********

****

Nor

mal

ized

EIC

D n

ucle

ar

Loca

lizat

ion

(x1

05,

A.U

.)

Control siRNA

- PMA

Epi-1 siRNA

- PMA

Epi-2 siRNA

- PMA

Original Image Binary Image(EICD positive region)

Figure S2.

Page 3: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

90120

54

90120

media

whole cell lysate

PMA

siRNA

- + - + - +

control Epi-1

IB: anti-N

IB: GAPDH

IB: Histone H3

EICDnuclear

cytosolic

35

24

15

942

24

15

35

24

15

9

42

24

15

IB: mAb5

IB: anti-tubulin

IB: mAb5

15

9

90120

PMA - + + -- + +

controlsiRNA Epi-1 Epi-2

IP: CS Anti-N

IB: mAb5(Epi-S)

24

15

9

35

5442

Epi-2

IB: anti-N

IB: anti-GAPDH

IB: anti-Histone H3*

Figure S3.

IB: anti-N

EICD

NTF

NTF

NTF

EICD

*

A

B

(overexposure)

Page 4: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

90

15

9

24

15

9

120

IB: anti-N

IB: mAb5

- - 5 10 20 5

DAPT

NTF

10 20

(Z-LL)2ketone

IP: CS Anti-N

EICD

Figure S4.

(overexposure)

Page 5: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

15

24

9

90120

15

9

15

42

PMA - + - + - +

nuclear

IB: anti-N

IB: anti-GAPDH

IB: anti-Histone H3

IB: mAb5(Epi-S)

- + - + - +

cytosolic

427 SP2bKD-10 SP2bKD-16427 SP2bKD-10 SP2bKD-16

A

B

Figure S5.

*

NTF

EICD

427

****

Nor

mal

ized

EIC

D n

ucle

ar

Loca

lizat

ion

(x10

3,

A.U

.)

SP2bKD-100

1

2

3

4

5

6

7

(overexposure)

EICD

Page 6: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

Figure S6.

0

0.5

1

1.5

0

0.5

1

1.5

427 SP2bKD-10

Rec

over

ed a

rea

(fol

d ch

ange

)

EICD - - +

*

*

C

A

0

0.5

1

1.5

2

Epi-2

PMA

Rec

over

ed a

rea

(fol

d ch

ange

)

- + - + - +

Epi-1ControlsiRNA

*

**

****

***

B

PMA

Epi-2

- + - + - +

Epi-1ControlsiRNA

0

0.5

1

1.5

**

***

******

***

# of

inva

sive

cel

ls(f

old

chan

ge)

D

*****

*

# of

inva

sive

cel

ls(f

old

chan

ge)

427 SP2bKD-10

EICD - - +

Page 7: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

Figure S7.

A

B

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

#2

#1

#3

#5

IB: anti-GFP

IB: anti-tubulin55

25 25

55

25

25

55

55

25

25

55

25

55

25

55

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

55

#4

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20

55 55

2525

25

55

GFP-positive nodules from #4 mouse

- EICD 2 15 17 7

4T1KD cell

12 19

IB: anti-GFP

IB: anti-tubulin

IB: anti-GFP

IB: anti-tubulin

IB: anti-GFP

IB: anti-tubulin

IB: anti-GFP

IB: anti-tubulin

IB: anti-GFP

IB: anti-tubulin

Page 8: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

0 1 2 3 4 5 6 7 8 9

Leukocyte migration

Response to lipopolysaccharide

Cell chemotaxis

Positive regulation of cell migration

Positive regulation of cellular component movement

Inflammatory response

Positive regulation of response to external stimulus

Positive regulation of MAPK cascade

Morphogenesis of a branching structure

Angiogenesis

-log(p-value)

Top cellular process

Figure S8.

Page 9: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

Figure S9.

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24

A Reference Acrp30 Amphiregulin Angiopoietin1 Angiopoietin2Angiopoietin-

like3TNFSF13B C1qR1 CCL2 CCL3 CCL5 Reference

B CCL6 CCL11 CCL12 CCL17 CCL19 CCL20 CCL21 CCL22 CD14 TNFRSF5

C CD160 ChemerinChitinase 3-

like1Coagulation

Factor IIIC5a

CompementFactor D

C-Reactive Protein

CX3CL1 CXCL1 CXCL2

D CXCL9 CXCL10 CXCL11 CXCL13 CXCL16 Cystatin C DKK1 DPPIV EGF Endoglin Endostatin Fetuin A

E FGF acidic FGF21 Flt-3 Ligand Gas6 CSF3 GDF15 CSF2 HGF ICAM1 IFN-γ IGFBP1 IGFBP2

F IGFBP3 IGFBP5 IGFBP6 IL-1α IL-1β IL-1ra IL-2 IL-3 IL-4 IL-5 IL-6 IL-7

G IL-10 IL-11 IL-12 p40 IL-13 IL-15 IL-17A IL-22 IL-23 IL-27 p28 IL-28A/B IL-33 LDLR

H Leptin LIF Lipocalin2 LIX CSF1 MMP2 MMP3 MMP9 Myeloperoxidase Osteopontin TNFRSR11B PD-ECGF

I PDGF-BB Pentraxin2 Pentraxin3 Periostin Pref-1 ProliferinProprotein

Convertase9RAGE RBP4 Reg3G Resistin

J Reference E-Selectin P-Selectin Serpin E1 Serpin F1 Thrombopoietin TIM-1 TNFα VCAM-1 VEGF-A WISP1 Neg Control

Page 10: Figure S1. AB MOCK Epi-GV-strep10.1186... · 90 120 54 90 120 media whole cell lysate PMA siRNA-+-+-+ control Epi-1 IB: anti-N IB: GAPDH IB: Histone H3 EICD nuclear cytosolic 35 24

24

15

9

90120

N T N T N T

Patient

N T

#1 #2 #3 #4

IB: IM1014(hEpi-S)

IB: anti-hN

hEICD

hNTF

Figure S10.