FAULTY FULL NAME · Mahmoud and Hosni 17 . Genetic variations in a conserved 5 - untranslated region of hepatitis C virus genome isolated from Sohag governate -Egypt. 18 . The 3 rd

1

FACULTY FULL NAME POSITION Associate professor

Personal Data

Nationality |Egyptian

Date of Birth |12/1/1968

Department |Biology

Official UoD Email | [email protected]

Office Phone No. |37278

Language Proficiency

Language Read Write Speak

Arabic Excellent Excellent Excellent

English Excellent Excellent Excellent

French Excellent Good Very good

Academic Qualifications (Beginning with the most recent)

Date Academic Degree Place of Issue Address

1990 BSc Cairo University Egypt

1994 MSc Cairo University-ORSTOM Egypt-France

2001 PhD Cairo University-CIRAD Egypt-France

PhD, Master or Fellowship Research Title: (Academic Honors or Distinctions)

PhD Biological and molecular characteristics of maize yellow stripe virus and its relationship with the leafhopper vector

Master Characterization and serology of the leafhopper-borne maize yellow stripe tenuivirus in Egypt

Fellowship Virus characterization and diagnosis, ORSTOM (Egypt-French project)

Fellowship Molecular characterization and Bioinformatics analysis of MYSV (CIRAD Montpellier, France)

Fellowship Bioinformatics analysis of CTV and its population structure (University of Davis-California, USA)

Professional Record: (Beginning with the most recent)

Job Rank Place and Address of Work Date

Associate professor Imam Abdulrahman Bin Faisal Univ.

Saudi Arabia 3-1-2017

Head of Bioinformatics GEBRI-Sadat Univ. Egypt 2015-2016

2

Dept.

Director manger Alkhwarizmi Center for Bioinformatics, Egypt

Egypt 2013

Associate professor GEBRI-Sadat Univ. Egypt 2012

Assistant professor GEBRI-Sadat Univ. Egypt 2005

Lecturer GEBRI-Sadat Univ. Egypt 2002

Post-Doc fellow UC-Davis USA 2001

Assistant lecturer Plant protection ins. Ministry of agric.

Egypt 1998

PhD fellowship CIRAD-Montpellier France 1995

MSc fellowship French-Egyptian project (ORSTOM)

Egypt 1991

Administrative Positions Held: (Beginning with the most recent)

Administrative Position Office Date

Head of Bioinformatics Dept. GEBRI-Sadat Univ., Egypt 2015

Director manger Alkhwarizmi Center for Bioinformatics, Egypt 2013

Head, community service committee Dept. Biology, College of Science, Imam Abdulrahman Bin Faisal Univ., KSA

2017

Head, administrative system committee GEBRI-Sadat Univ., Egypt 2015-2016

Scientific Achievements

Refereed Scientific Research Papers Accepted for Publication

# Name of Investigator(s) Research Title Journal Acceptance Date

Published Refereed Scientific Researches (In Chronological Order Beginning with the Most Recent)

# Name of Investigator(s) Research Title Publisher and Date of Publication

1 Essam M Janahi; Aboul-Ata E Aboul-Ata; I M El-Kalamawy; Amal Mahmoud; M S El-Ghan-am; Kathleen Hefferon

HBV Genome, HbsAg Isolation and Virotherapy Innovation Using Plant System in the Middle East. HEPATITIS: A GLOBAL HEALTH CONCERN.

1. ISBN: 978-93-87500-05-1 2. 2018

2 3. Elhefnawi, M. M., Hasan, M. E., Mahmoud, A., Khidr, Y. A., El-Absawy, E. A., Hemeida, A. A.

4. Prediction and analysis of three dimensional structure of the p7-transactivated protein1 of hepatitis C virus.

5. Infectious Disorders - Drug Targets. 18.2018

3 Mohamed Ezz, Amal Mahmoud, Fawzy A. El-Feky and Alaa A. Hemeida

6. Searching and Analyzing for a Different Lengths of Microsatellite Repeats in the Completed Genome of Phoenix dactylifera Chloroplast, by Using Regular Expression builder –Language

7. International Journal of Science and Research (IJSR). 6 (8):1296-1301.2017.

4 Salem A. El-aarag, Amal In silico identification of potential key BMC Medical Genomics 10:40.

3

Mahmoud, Medhat H. Hashem, Hatem Abd Elkader, Alaa E. Hemeida and Mahmoud ElHefnawi

regulatory factors in smoking-induced lung cancer

2017

المعلىماتيه الحيىيه...افاق واعذه في تشخيص د. امال محمىد 5

االمراض مجلة التقذم العلمي

4/7102

6 Zidan A. M.; Alaa A. Hemeida and Amal Mahmoud

The target to mediate Nitazoxanide's anti-HCV effect. In-silico study

Edition: 1st, Publisher: LAMBERT academic publishing, ISBN: 978-3-659-92424-8 (2016)

7 Nadia S. El-Nahas, Gehan S. Sadek, Amal Mahmoud, Amany A. Rady, Salwa, F. Oshiba and Reham M. Barakat.

Immunological, histopathological and immunohistochemical responses to a new B cell epitope-based vaccine against leishmaniasis in experimental mice.

Journal of American Science 11(7). 2015 .

8 8. Amal Mahmoud and Medhat H. Hashem

Bioinformatics analysis of polymerase and envelope genes of Hepatitis B virus in Egypt.

Egyptian J. Virol. 11 32-37. 2014

9 9. Zidan A. M.; Alaa A. Hemeida; Amal Mahmoud and Medhat H. Hashem

Glycogen synthase kinase 3 β prediction as primary cellular target to mediate the anti-hepatitis C effect of nitazoxanide. Int. Res. J. pharm. 4(11): 37-39.

.Int. Res. J. pharm. 4(11): 37-39. (2013).

10 10. Ibrahim, A. I , Hemida A. A.,

Amal M. Hussain, Bekhit, M.

and Amal , A. Zweil.

11. Comparative Studies On Catharanthus

sp. Cultivars using Chlorophyll Content

and Peroxidase Isozyme.

12. J. product. & Dev.,

13. 18(1):77-84. (2013).

11 14. El-Absawy, E.A; Amal

Mahmoud, A.A. Hemeida and

M. Helmy

Molecular variation of Potato virus Y isolated from Egypt. International J. Virol.

8 (1) 81-89. (2012).

12 15. Zaghloul, A. H., Mahmoud,

Amal, Hassan, H. Y., Hemeida,

A. A., Nayel, M. A. and

Zaghawa, A. A.

16. Establishment of dot-blot hybridization

for diagnosis of bovine ephemeral

fever virus in Egypt.

International J. Virol.

8 (3) 271-278. (2012).

13 17. Amal Mahmoud and Medhat H.

Hashem.

18. Phylogenetic subtyping of hepatitis C

virus 5' UTR isolated in Egypt and the

effect of 2 transitions in subdomain IIId

on the apical loop structure.

19. Life Science J.

20. 9 (1). (2012).

14 21. Mahmoud, A.

22. Comparative sequence analysis and

epitope prediction of the partial

glycoprotein G gene of bovine

ephemeral fever virus isolate from

Egypt.

23. Egyptian J. Virol.

24. 9 (1) 49-58. (2012).

15 25. Khidr, Y. A. Mahmoud, A. El-

Absawy, E. A. Hemeida, A.A.

and Hasan, M. E.

26. Production of Transgenic Cucumber

Plantlets containing Sequences from

Watermelon Mosaic Virus-II fused with

GFP Gene.

27. Journal of genetics and cytolo ,

41(1): 19-35. (2012).

4

16 El-Absawy, E. A ,Khidr, Y. A.

Mahmoud, A., Hasan, M. E. and

Hemeida, A. A.

Somatic Embryogenesis and Plant

Regeneration Induced from Mature

Seeds, Cotyledons and Shoot Tips of

Cucumber. Journal of Productivity and

Development.

28. Journal of Productivity and

Development. J. Produt. & Dev.,

29. 17(2): 193-209. 2012.

17 30. Hemeida, A. A.; M. Osman;

Mohamed El-Shahat; Medhat

H. Hashem; Amal Mahmoud

and Hosni Dahi

31. Genetic variations in a conserved 5'-

Untranslated region of hepatitis C virus

isolated from Egypt.

32. International J. Virol,

33. 7(3) 91-99. 2011.

18 34. Ammar E.-D., Aboul-Ata A.

E.and Mahmoud, A.

35. Maize virus diseases, “in Virus Diseases

affecting crops in the Arab world”.

36. Beirut, Lebanon,

37. 970 pp. 2009.

19 38. El-Araby, W., S., Ibrahim, I., A.,

Hemeida, A., A., Mahmoud,

Amal, Soliman, A. M. El-Attar,

A. K., and Mazyad, H. M.

39. Biological, serological and molecular

diagnosis of three major potato viruses

in Egypt. International journal of virology 5 (2): 77-88. 2009.

20 Ibrahim A. I, Hemeida A. A, Nower, A. A., Amal Mahmoud, Salwa N. Zein and Asmaa abdelmordy.

Antiserum production and molecular detection of Potato virus X and Potato virus Y.

Egyptian J. Virol., 6:273-285(2009).

21 40. Ammar E.-D., Khlifa E. A.,

Mahmoud A., Abol-Ela S. E. and

Peterschmitt M.

Evidence for multiplication of the leafhopper-borne maize yellow stripe virus in its vector using ELISA and dot-blot hybridization.

Arch Virol 152: 489-494(2007).

22 41. Mahmoud A., Royer M.,

Granier M., Ammar E.-D. and

Peterschmitt M.

High genetic identity between RNA 3 segment of an Old World isolate and a New World isolate of Maize stripe virus.

Arch Virol 152: 1583-1586. (2007).

23 42. Mahmoud A., Royer M.,

Granier M., Ammar E.-D.,

Thouvenel J.-C. and

Peterschmitt M.

Evidence for a segmented genome and partial nucleotide sequences of Maize yellow stripe virus, a proposed new tenuivirus.

. Arch Virol 152: 1757-1762(2007).

24 43. Mahmoud A.

Ph.D. (Biological and molecular characteristics of maize yellow stripe virus and its relationship with the leafhopper vector)..

Ph.D. thesis, Cairo University, pp154(2001).

25 44. Mahmoud A. H., Thouvenel J.

C., Abol Ela S. E., Sewify G. H.

and Ammar E. D.

Detection of maize yellow stripe tenui-like virus by ELISA and dot-blot tests in host plants and leafhopper vector in Egypt.

Phytopath. medit. 35, 19-23(1996).

26 45. Thouvenel J. C., Abol Ela S. E.,

Sewify G. H., El-Hariry M.,

Mahmoud A. H. and Ammar E.

D.

Characterization and serology of the leafhopper-borne maize yellow stripe tenuivirus in Egypt.

Bull. Fac. Agric., Cairo Univ. 47, 179-190. (1996).

27 46. Amal Mahmoud Hussein et Diagnostic du virus des rayures jaunes Nouvelles scientifiques. PP 78(1995).

5

Laurent Bigarre. du mais en Egypte.

28 Mahmoud, A. M. Sc. (Characterization and serology of the leafhopper-borne maize yellow stripe tenuivirus in Egypt).

M.Sc. thesis, Cairo University, pp75 (1994).

Scientific Research Papers Presented to Refereed Specialized Scientific Conferences

# Name of Investigator(s) Research Title Conference and Publication Date

1 1. Mahmoud M. El Hefnawi, Mohamed E. Hasan, Amal Mahmoud, Yehia A. Khidr, El-Sayed A. El-Absawy and Alaa A. Hemeida

2. 3-D structure prediction and analysis of the p7-transactivated protein1 of hepatitis C virus.

The 6th

international conference of the Egyptian society of virology " Viral risks and environmental changes, the role of national & international organization". Hurghada, Egypt on 29November-2 December, 2016.

2 3. Mohamed Ezz, Amal Mahmoud, Fawzy El-Tohamy and Alaa A. Hemeida

4. Detection and Comparative Analysis of the Tandem Repeats Motifs in the Completed Genomes of Human Coronavirus (Hku1) By Using Regular Expression Finder Tool.

The 6th

international conference of the Egyptian society of virology " Viral risks and environmental changes, the role of national & international organization". Hurghada, Egypt on 29November-2 December, 2016.

3 5. Amal Mahmoud, Reham

M. Barakat,

Nadia S. El-

Nahas, Gehan S. Sadek,

Amany A. Rady and

Salwa F. Oshiba.

6. Evaluation of Immune Response

Against Leishmaniasis in Vaccinated

Experimental Mice by Different

Antigenic Epitopes.

7.

1st

international conference of Genetic Engineering and Biotechnology Research Institute” Integrative science and biotechnology”. Sharm El-Sheikh, Egypt on 26-29 April, 2016.

4 8. Amal Mahmoud and

Medhat H. Hashem.

9.

10. Bioinformatics analysis of the S Gene of Hepatitis B Virus in Egypt.

The 5th

international conference of the Egyptian society of virology "Viruses and their potential hazard to human, animal and plant, the role of national & international organization". Hurghada, Egypt on 9-12 December, 2014.

5 11. Amal Mahmoud, Maria

Tsompana, Hany Sheta,

Elizabeth Grafton-

Cardwell, MaryLou

Polek, J. Gumpf, D, and

Diane E. Ullman.

12. Aphid Transmission of Citrus tristeza virus Reduces Nucleotide Diversity and Results in Genotype Alteration and Fixation of New Amino Acid Substitutions in the Leader Proteinase Domain L2.

The 4th

International Conference of Virology "Towards strategy fo controlling viral pathogens". Sharm El-Sheikh, Egypt on 14-16 November, 2012, pp. 67.

6 13. El-Absawy, E. A., Amal

Mahmoud, Hemeida, A.

A., and Helmy, M.

14.

15. Molecular variation of Potato virus Y isolated from Egypt.

The 3rd

international conference of the Egyptian society of virology "Current challenge of viral diseases". Cairo University, Egypt on 24-25 November, 2010.

7 16. Hemeida, A. A.; M.

Osman; Mohamed El-

Shahat; Medhat H.

Hashem; Amal

Mahmoud and Hosni

17. Genetic variations in a conserved 5-

untranslated region of hepatitis C virus

genome isolated from Sohag

governate-Egypt.

18.

The 3rd


6

Dahi.

8 19. Zaghloul,

A. H., Amal

Mahmoud, Hassan, H. Y.,

Hemeida, A. A.,

Zaghawa,

A. A. and

Nayel, M.

20. Establishment of Dot-Blot Hybridization For Diagnosis of Bovine Ephemeral Fever Virus In Egypt.

The 3rd


9 21. Ibrahim, A. I., Mazyad, H.

M., Hemeida, A. A., Amal,

Mahmoud, Soliman, A.

M., El-Attar, A. K. and El-

Araby, W. S.

Comparative study for the detection of three major potato viruses using several molecular and serological methods

. “New Life Sciences: From Promises to Practice” Bio Vision Alexandria 12-16 April 2008, poster presenter's pp. 2.2008.

10 22. Ibrahim, A. I., Mazyad, H. M., Hemeida, A. A., Amal, Mahmoud, Soliman, A. M.; El-Attar, A. K. and El-Araby, W. S.

23. Biological studies, serological and molecular diagnosis of three major potato viruses in Egypt.

The Second International Conference of Virology "Emerging and Exotic Viral Infection, Challenging Threats of Human, Animal and Plant Health" 5-6 April, 2008, pp24. 2008

11 24. Ammar E.D., Mahmoud

A., Khlifa E., Granier M.,

Peterschmitt M.

25. Evidence for multiplication of the

leafhopper-borne maize yellow stripe

tenui-like virus in its vector and

suggestion of a new genus for

tenuiviruses [Abstract].

26.

Advances in plant virology : A three day International conference at CIRAD, Montpellier, France on 29 September - 1 October 2003. Wellesbourne : Association of Applied Biologists, 1 p.. International Conference : Advances in Plant Virology, 2003-09-29/2003-10-01, Montpellier, France. 2003.

12 27. Diane E. Ullman, Amal

Salem, Hany Sheta and

Bryce W. Falk.

28. Is aphid transmission of Citrus tristeza virus (CTV) a genetic bottleneck?. The

ESA Annual Meeting and Exhibition Fort Lauderdale, FL. USA, November, 2002.

13 29. Mahmoud A., Sheta H.,

Grafton-Cardwell E.,

polek M., Gumpf D., Falk

B. and Ullman D.

30. The role of aphid transmission in Citrus tristeza virus population structure. The

American society of virology (ASV) meeting. University of Kentucky, USA on 21-24 July, 2002.

14 31. Mahmoud A., Granier

M., Peterschmitt M.,

Abul-Ela S. and Ammar E.

D.

32. Multiplication of maize yellow stripe virus in its leafhopper vector, Cicadulina chinai.

First conference on Integrated Pest Management (IPM) At the college of Agriculture, Cairo University, Giza, Egypt on 22

nd-23

rd April, 2001.

15 33. Mahmoud A. H., Royer

M., Granier M., Ammar

E. D., Thouvenel J. C. and

Peterschmitt M.

34. Biological and molecular characterization of the leafhopper-borne maize yellow stripe tenuivirus from Egypt.

Societe Francaise de Phytopathologie., Proceedings of the 10

th congress of the mediterranean

phytopathological union. June 1st

-5th

, 1997, Montpellier, France. P. 349-350. 1997.

Completed Research Projects

# Name of Investigator(s) Research Title Report Date

7

(Supported by)

1 Zaghloul, A. H., Mahmoud, Amal, Hassan, H. Y., Hemeida, A. A., Nayel, M. A. and Zaghawa, A. A.

The application of molecular

biology for diagnosis of bovine

ephemeral fever in cattle "

47. Establishment of dot-blot hybridization

for diagnosis of bovine ephemeral fever

virus in Egypt.

2007

Current Researches

# Research Title Name of Investigator(s)

1 Project: Bioinformatics analysis of bacterial alkaline Proteases in Saudi Arabia

Amal Mahmoud, Amany Alqosaibi and Essam Kotb

2 Project: Bioinformatics screening of bacterial species in Saudi Arabia

Amal Mahmoud, Amany Alqosaibi and Essam Kotb

3 Project: Production of pathogen-free minitubers of potato in New Wadi governorate

Ibrahim Abd Almaksoud, Taymoor and Amal Mahmoud

4 In silico analysis of complete genome of Watermelon chlorotic stunt virus

Adel Sabour, Amal Mahmoud

5 In Silico Discovery of novel Hepatitis C Virus P7-transactivated Protein1 Inhibitor by using Structure-Based Virtual Screening

Mahmoud M. El Hefnawi, Mohamed E. Hasan, Amal Mahmoud Yehia A. Khidr, El-Sayed A. El-Absawy , Alaa A. Hemeida

6

Molecular identification of populations of bacteria associated

with samples of stored rice in Saudi Arabia

Amal Mahmoud, Sahar Eldousary, Ekbal Khedr

7 Detection and Comparative Analysis for the Tandem Repeats Motif in the Completed Genomes of Human Coronavirus (Hku1) by Using Regular Expression Finder Tool

Mohamed Ezz , Amal Mahmoud

8 Functional genomic analysis for stem rust resistance in durum

wheat (T.turgidum L. subsp. Durum)

Lamiaa Salah el den el said, Amal

Mahmoud,

Aminaabd el hamed, and Alaa A. Hemeida

Identification of molecular markers linked to stem rust resistance gene in Egyptian Durum Wheat cultivars

Lamiaa Salah el den el said, Amal

Mahmoud, Amina abd el hamed, Doaa

R.

EL-Naggar, and Alaa A. Hemeida

Contribution to Scientific Conferences and Symposia

# Conference Title Place and Date of the Conference Extent of Contribution

1 Viral risks and environmental changes, the role of national & international organization

Hurghada, Egypt on 29November-2 December, 2016

Attendant

2 1st

international conference of Genetic Engineering and Biotechnology Research Institute” Integrative science and biotechnology”

Sharm El-Sheikh, Egypt on 26-29 April, 2016

Speaker

3 The 5th

international conference of the Egyptian society Hurghada, Egypt on 9-12 Poster

8

of virology "Viruses and their potential hazard to human, animal and plant, the role of national & international organization".

December, 2014.

4 35. The 4th

International Conference of Virology "Towards

strategy fo controlling viral pathogens".

Sharm El-Sheikh, Egypt on 14-16 November, 2012, pp. 67.

Speaker

5 The 3rd

international conference of the Egyptian society of virology "Current challenge of viral diseases".

Cairo University, Egypt on 24-25 November, 2010

attendant

6 “New Life Sciences: From Promises to Practice” Bio Vision Alexandria 12-16 April 2008, poster presenter's pp. 2.

Poster

7 The Second International Conference of Virology "Emerging and Exotic Viral Infection, Challenging Threats of Human, Animal and Plant Health

Cairo, 5-6 April, 2008, pp. 24. Attendant

8 Advances in plant virology: A three day International

conference at CIRAD, Montpellier, France on 29

September - 1 October 2003. Wellesbourne: Association

of Applied Biologists, 1 p.. International Conference :

Advances in Plant Virology,

2003-09-29/2003-10-01, Montpellier, France.

Poster

9 36. The American society of virology (ASV) meeting. University of Kentucky, USA on 21-24 July, 2002.

poster

10 37. First conference on Integrated Pest Management (IPM) College of Agriculture, Cairo University, Giza, Egypt on 22

nd-

23rd

April, 2001.

Speaker

11 38. Societe Francaise de Phytopathologie., Proceedings of

the 10th

congress of the mediterranean

phytopathological union.

June 1st

-5th

, 1997, Montpellier, France. P. 349-350.

poster

Membership of Scientific and Professional Societies and Organizations

Member, Egyptian Society of Virology (ESV)

Member, scientific projects committee

Teaching Activities

Undergraduate

# Course/Rotation Title No./Code Extent of Contribution (no. of lectures/Tutorials. Or labs, Clinics)

1 Cytology BIOL 142N 13 lectures

2 Cell biology BIOL 206 Lab advisor

3 Parasitology BIOL 343N Lab advisor

4 Immunology BIOL 442N Lab advisor

5 Molecular Biology BIOL 401N 14 Lectures

6 Molecular Biology BIOL 401N 14 Lectures

7 Molecular Biology BIOL 401N Lab advisor



10 Principle of Genetics GENETC 304 Lab advisor

11 Graduation project BIOL 448N 14 discussions/5 students

9

12 Molecular Biology GENETC 308 14 Lectures

13 Molecular Biology GENETC 308 Lab advisor

14 Graduation project BIOL 448N 1 student

Lab advisor تحضيرات مجهريه 15

16 Bioinformatics BIOL401 15 lectures

17 Bioinformatics BIOL401 Lab advisor

18 Principle of Genetics GENETC 304 14 lectures

19 Principle of Genetics GENETC 304 Lab advisor

20 Graduation project BIOL 448N 3 students Brief Description of Undergraduate Courses Taught: (Course Title – Code: Description)

1 Cytology BIOL 142N:

Studying cell organelles: structure, function. Diagnosis of cell changes and pathogens.

2 Molecular Biology BIOL 401N

This course focus on the genome analysis: Genome structure, Replication, transcription and

translation, mutation, gene regulation and genetic engineering Postgraduate

# Course/Rotation Title No./Code Extent of Contribution (no. of lectures/Tutorials. Or labs, Clinics)

1 Advanced physiological microbiology MICRO 574 10 Labs

2 Nucleic acid sequence analysis (MSc) B8-10 Lectures/labs

3 Proteomics (PhD) B8-21 Lectures/labs

4 Protein sequence analysis (MSc) B8-20 Lectures/labs

5 Sequence analysis (PhD) B8-22 Lectures/labs

6 Bioinformatics (MSc) B8-2 Lectures/labs

7 Seminars (MSc/PhD) B8-24 Lectures

8 Special topics (MSc/PhD) B8-23

9 Molecular methods in virology - Lectures

10 Advanced and general virology - Lectures

11 Fundamentals of plant virology - Lectures

12 Plant diseases - Lectures

13 Transgenic plants Lectures

14 Diagnosis and control of plant diseases Lectures

Brief Description of Postgraduate Courses Taught: (Course Title – Code: Description)

10

1 Advanced physiology of microbiology MICRO 574 :

identification of pathogens using bioinformatics tools

2 Nucleic acid sequence analysis B8-10

studying sequence at the level of nucleic acid , detect different types of mutations

3 Proteomics B8-21:

use bioinformatics tools to study the genome at the protein level

4 B8-20 protein sequence analysis

the course focus on analyzing the amino acid sequence and the related substitutions

5 B8-22 sequence analysis

This course focus on how the student retrieve and submit different types of sequences to biological

databases

6 Bioinformatics B8-2

This course describe basics of bioinformatics, how to use different biological databases.

7 Methods in molecular virology

In this course students will learn how to use different methods for virus diagnosis at the level of

nucleic acid and protein

8 Advanced molecular virology

This course focus on genome expression details, virus evolution, and diagnosis

9 Fundamentals of pant virology

Basics of virus identification , isolation, diagnosis and control

10 Plant diseases

Methods of identification and diagnosis, control of pathogens

11 Transgenic plants

Methods of producing transgenic plants

12 Diagnosis and control of plant diseases

In this course students learn how to use different methods for diagnosis and control of pathogens

Course Coordination

# Course Title and Code Coordination Co-coordination Undergrad. Postgrad. From to

1 Cytology- BIOL 142N yes - yes - 2017 2018

2 Advanced physiology of microbiology

Practical coordination

- - yes 2017 2017

3 Molecular Biology Practical coordination

- yes - 2017 2018

Guest/Invited Lectures for Undergraduate Students

# Activity/Course Title and Code

Subject College and University or Program Date

11

Student Academic Supervision and Mentoring

# Level Number of Students From to

Supervision of Master and/or PhD Thesis

# Degree Type

Title Institution Date

1 PhD Protein structure prediction by Bioinformatics tools

Bioinformatics department, GEBRI, Sadat University

2017

2 PhD Immunological, histopathological and immunohistochemical responses to a new B cell epitope-based vaccine against leishmaniasis in experimental mice

Faculty of medicine, Menoufia University

2015

3 MSc Computational prediction of the protein kinase

that mediates the anti-HCV effect of

nitazoxanide


2014

4 MSc In silico identification of drug targets in lung cancer


2014

5 MSc Studies on molecular variations of potato virus X and Y in Egypt

Plant Biotechnology department, GEBRI, Sadat University

2012

6 MSc In Vitro Production Of Specific Pathogen Tested Potato Plants


2010

7 MSc Development and Standardization of Rapid and Sensitive viral Detection Methods Based on Molecular Biology for the Diagnosis of Some Potato Viruses


2008

Ongoing Research Supervision

# Degree Type

Title Institution Date

1 PhD Detection and Comparative Analysis for the

Tandem Repeats Motif / Microsatellite Repeats

in the Completed Genomes by Using Regular

Expression Finder Tool


2014

2 PhD Computational Design and Selection of

Optimal Materials as biosensor for detection of

viral diseases


2016

3 PhD Functional genomic analysis for stem rust Bioinformatics department, GEBRI, Sadat University

2014

12

resistance in durum wheat (T.turgidum L. subsp.

Durum)

4 PhD Bioinformatics and Pharmacogenomics in

personalized cancer medicine

Introduction


2015

5 PhD Genetic guided clinical pharmacy: right drug,

right dose, and right time prediction based on

patient's genetic profile.


2015

6 PhD Genetic guided clinical pharmacy: right drug,

right dose, and right time prediction based on

patient's genetic profile.


2015

Administrative Responsibilit ies, Committee and Community Service (Beginning with the most recent) Administrative Responsibilities

# From To Position Organization

1 2015 2016

Head of Bioinformatics Dept. GEBRI-Sadat University, Egypt

2 2013 Present Director manger Alkhwarizmi Center for Bioinformatics, Egypt

Committee Membership

# From To Position Organization

1 2018 present Head of genetics scientific research Dept. Biology, College of Science, Dammam Univ., KSA

2 2018 2018 Member, promotion committee Dept. Biology, College of Science, Dammam Univ., KSA

3 2017 present Member, scientific research committee Dept. Biology, College of Science, Dammam Univ., KSA

4 2017 present Member, postgraduate committee Dept. Biology, College of Science, Dammam Univ., KSA

5 2016 2016 Member-Scientific projects committee GEBRI-Sadat Univ. Egypt

6 2016 2016 Member-Course specification-dept. bioinformatics committee

GEBRI-Sadat Univ. Egypt

6 2015 2015 Member-Course specification-dept. plant biotechnology committee

GEBRI-Sadat Univ. Egypt

Scientific Consultations

# From To Institute Full-time or Part-time

2016 2016 Society and environment committee-Sadat Univ-Egypt Part-time

2013 2016 Alkhwarizmi for Bioinformatics Part-time

13

2005 2005 Viral diagnosis-Farm fries company- Sadat Univ-Egypt Part-time

Volunteer Work

# From To Type of Volunteer Organization

2013 2016 Personal skills topics Facebook

Personal Key Competencies and Skills: (Computer, Information technology, technical, etc.)

1 Online training course, educational videos

2 Personal skills

Last Update

12/9/2018

Documents

FAULTY FULL NAME · Mahmoud and Hosni 17 . Genetic variations in a conserved 5 - untranslated region of hepatitis C virus genome isolated from Sohag governate -Egypt. 18 . The 3 rd