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Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers Can cause inflated evaluations when high & low producers are in the same management group

Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

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Page 1: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Extreme Deviations

Herds with large percentage of their cows on Elite List may have two management systems in their herds:High producersLow producers

Can cause inflated evaluations when high & low producers are in the same management group

Page 2: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Herds with Elite Cows

~300 herds with 5+ cows on elite listDo their descriptive and normality statistics provide any useful characteristics to identify potentially “bimodal” herds?Does their 1st lactation ME milk deviation distribution look “visually suspicious”?

Page 3: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Look suspicious to you?

Page 4: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Data

12 most “important” dairy statesCalculate each cow’s 1st lactation ME milk deviation from herd annual mean ME milk 1997-2001 18194 herds N 10 (per year)

Descriptive statistics, Normality test statisticsSub data sets of herds with 5+ cows on elite list

Page 5: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Statistics (1)

Descriptive statistics:Skewness (SKEW)Kurtosis (KUR)Standard error of the mean (STDMEAN)

Standard deviation / Sum of weights

Page 6: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Statistics (2)

Normality statistics:Normal vs. non-normalKolmogorov statistic (KS)Problems with normality tests:

Very sensitive to herd size (i.e. >30% of CA herds are “not normally” distributed compared to < 3% in PA, WI, MN)

Should not be used as only criteria

Page 7: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Preliminary Results

Herds with +5 cows on elite list, “not normal”, “visually suspicious”, had higher SKEW and STDMEAN than herds that “looked okay”

Herds with +5 cows on elite list, “not-normal”, had higher SKEW, KUR, and KS than herds designated “normal”

All herds, “not-normal”, had higher SKEW and KUR than herds designated “normal”

Page 8: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Identifying Herds

Use normality and descriptive statistics:

KS 0.08 & (KUR 0.8 || SKEW 0.35) & STDMEAN 250

This threshold successfully identifies ALL of the “visually suspicious” herds and ~29% of all herds (5387 out of 18194)If threshold restricted to herds found not normally distributed first (880 out of 18194), it identifies only 235 herds

Page 9: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

STDMEAN & KS vs. % on Elite List

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0 100 200 300 400 500 600 700 800

STDM EAN

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0 0.02 0.04 0.06 0.08 0.1 0.12 0.14 0.16

KS

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The higher STDMEAN or KS, the larger the %of cows on the Elite List

Page 10: Extreme Deviations Herds with large percentage of their cows on Elite List may have two management systems in their herds: High producers Low producers

Adjusting Herd Data

Based on the value of KS and STDMEAN, incrementally adjust heritability (as in heterogeneous variance adjustment)

Result: records from herds with abnormal distributions receive less weight