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ERRATUM Erratum to: Purification and characterization of heterologously expressed nitrilases from filamentous fungi Alena Petříčková & Alicja Barbara Veselá & Ondřej Kaplan & David Kubáč & Bronislava Uhnáková & Anna Malandra & Jürgen Felsberg & Anna Rinágelová & Philip Weyrauch & Vladimír Křen & Karel Bezouška & Ludmila Martínková Published online: 17 September 2013 # Springer-Verlag Berlin Heidelberg 2013 Erratum to : Appl Microbiol Biotechnol (2012) 93:15531561 DOI 10.1007/s00253-011-3525-7 Two works cited in the previous article (Kaplan et al. 2006, 2011) were corrected (Kaplan et al. 2013a) or retracted (Kaplan et al. 2013b). The reason was the falsity of data (N-terminal aa sequence and the MALDI-TOF analysis) by KB whose ethics of scientific work was examined in 2012 by the Ethics Commission of the Charles University in Prague and the Institute of Micro- biology of the Academy of Sciences of the Czech Republic. The Commission found scientific misconduct of KB in several cases. Therefore, we wish to correct the following parts of the previous article: Introduction: The nitrilase studied by us in Aspergillus niger K10 was the first fungal nitrilase to be purified from both its nativeand heterologous producer…” Actually, the enzymes purified from the native and heterologous producer were dif- ferent. The enzyme natively expressed in this strain was puri- fied and characterised (Kaplan et al. 2006) and its partial aa sequence was recently published (Kaplan et al. 2013a). The recombinant enzyme was recently examined for its substrate specificity in whole cells (Kaplan et al. 2013c), and was found to be a cyanide hydratase with a significant nitrilase activity. Materials and methods, Nitrilase expression: Construction of plasmid pOK101 referred to Kaplan et al. 2011 (retracted article). Therefore, we wish to describe this method here: To construct plasmid pOK101, NdeI-HindIII fragment of the PCR product amplified from cDNA of Aspergillus niger K10 (forward primer 5-GCC ATATGG CAC CMG TCT TRA AGA AGT ACA A- 3, M=A or C; R=A or G, and reverse primer, 5-GCA AGC TTT TAC TAG TTC TCC GAATCC ACG GT-3) was ligated into vector pET-30a(+) (Novagen). Results, Variability of fungal nitrilases: The statement that in the nitrilase from A . niger K10 both its amino acid sequence and its biochemical properties have been already knownreferred to Kaplan et al. 2011 (retracted article). For substrate specificity of this enzyme please refer to Kaplan et al. 2013c (see also above). Results, Nitrilase in Aspergillus niger K10: The hypothesis that the difference of substrate specificities in the natively expressed and the recombinant enzymes were caused by misfolding of the latter referred to Kaplan et al. 2011 (retracted article). Actually, the two enzymes were different in terms of their primary structure (see above). The online version of the original article can be found at http://dx.doi.org/ 10.1007/s00253-011-3525-7. A. Petříčková : A. B. Veselá : O. Kaplan : D. Kubáč : B. Uhnáková : A. Malandra : A. Rinágelová : P. Weyrauch : V. Křen : K. Bezouška : L. Martínková (*) Institute of Microbiology, Centre of Biocatalysis and Biotransformation, Academy of Sciences of the Czech Republic, Vídeňská 1083, CZ-142 20 Prague, Czech Republic e-mail: [email protected] J. Felsberg Institute of Microbiology, Centre for DNA Sequencing, Academy of Sciences of the Czech Republic, Vídeňská 1083, CZ-142 20 Prague, Czech Republic A. Petříčková : A. B. Veselá : K. Bezouška Department of Biochemistry, Faculty of Science, Charles University in Prague, Hlavova 8, CZ-128 40 Prague, Czech Republic A. Malandra Department of Chemistry, Chemical Engineering and Materials, University of L Aquila, Via Campo di Pile - Zona industriale di Pile, 67100 L Aquila, Italy P. Weyrauch Institute of Molecular Microbiology and Biotechnology, Westfalian Wilhelms-University Münster, Corrensstrasse 3, 48149 Münster, Germany Appl Microbiol Biotechnol (2013) 97:92639264 DOI 10.1007/s00253-013-5204-3

Erratum to: Purification and characterization of heterologously expressed nitrilases from filamentous fungi

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ERRATUM

Erratum to: Purification and characterization of heterologouslyexpressed nitrilases from filamentous fungi

Alena Petříčková & Alicja Barbara Veselá & Ondřej Kaplan & David Kubáč &

Bronislava Uhnáková & Anna Malandra & Jürgen Felsberg & Anna Rinágelová &

Philip Weyrauch & Vladimír Křen & Karel Bezouška & Ludmila Martínková

Published online: 17 September 2013# Springer-Verlag Berlin Heidelberg 2013

Erratum to:ApplMicrobiol Biotechnol (2012) 93:1553–1561DOI 10.1007/s00253-011-3525-7

Two works cited in the previous article (Kaplan et al. 2006,2011) were corrected (Kaplan et al. 2013a) or retracted (Kaplanet al. 2013b). The reason was the falsity of data (N-terminal aasequence and theMALDI-TOF analysis) by KBwhose ethics ofscientific workwas examined in 2012 by the Ethics Commissionof the Charles University in Prague and the Institute of Micro-

biology of the Academy of Sciences of the Czech Republic. TheCommission found scientific misconduct of KB in several cases.Therefore, we wish to correct the following parts of the previousarticle:Introduction: “The nitrilase studied by us in Aspergillus nigerK10 was the first fungal nitrilase to be purified from both itsnative… and heterologous producer…” Actually, the enzymespurified from the native and heterologous producer were dif-ferent. The enzyme natively expressed in this strain was puri-fied and characterised (Kaplan et al. 2006) and its partial aasequence was recently published (Kaplan et al. 2013a). Therecombinant enzyme was recently examined for its substratespecificity in whole cells (Kaplan et al. 2013c), and was foundto be a cyanide hydratase with a significant nitrilase activity.Materials and methods, Nitrilase expression: Construction ofplasmid pOK101 referred toKaplan et al. 2011 (retracted article).Therefore, we wish to describe this method here: To constructplasmid pOK101, NdeI-HindIII fragment of the PCR productamplified from cDNA of Aspergillus niger K10 (forward primer5′-GCC ATATGG CAC CMG TCT TRA AGA AGTACA A-3′, M=A or C; R=A or G, and reverse primer, 5′-GCA AGCTTT TAC TAG TTC TCC GAATCC ACG GT-3′) was ligatedinto vector pET-30a(+) (Novagen).Results, Variability of fungal nitrilases: The statement that in thenitrilase fromA . niger K10 “both its amino acid sequence and itsbiochemical properties have been already known” referred toKaplan et al. 2011 (retracted article). For substrate specificity ofthis enzyme please refer to Kaplan et al. 2013c (see also above).Results, Nitrilase in Aspergillus niger K10: The hypothesisthat the difference of substrate specificities in the nativelyexpressed and the recombinant enzymes were caused bymisfolding of the latter referred to Kaplan et al. 2011 (retractedarticle). Actually, the two enzymes were different in terms oftheir primary structure (see above).

The online version of the original article can be found at http://dx.doi.org/10.1007/s00253-011-3525-7.

A. Petříčková :A. B. Veselá :O. Kaplan :D. Kubáč :B. Uhnáková :A. Malandra :A. Rinágelová : P. Weyrauch :V. Křen :K. Bezouška : L. Martínková (*)Institute of Microbiology, Centre of Biocatalysisand Biotransformation, Academy of Sciences of the Czech Republic,Vídeňská 1083, CZ-142 20 Prague, Czech Republice-mail: [email protected]

J. FelsbergInstitute of Microbiology, Centre for DNA Sequencing,Academy of Sciences of the Czech Republic, Vídeňská 1083,CZ-142 20 Prague, Czech Republic

A. Petříčková :A. B. Veselá :K. BezouškaDepartment of Biochemistry, Faculty of Science, Charles Universityin Prague, Hlavova 8, CZ-128 40 Prague, Czech Republic

A. MalandraDepartment of Chemistry, Chemical Engineering and Materials,University of L’Aquila, Via Campo di Pile - Zona industriale di Pile,67100 L’Aquila, Italy

P. WeyrauchInstitute of Molecular Microbiology and Biotechnology,Westfalian Wilhelms-University Münster, Corrensstrasse 3,48149 Münster, Germany

Appl Microbiol Biotechnol (2013) 97:9263–9264DOI 10.1007/s00253-013-5204-3

References

Kaplan O, Vejvoda V, Plíhal O, Pompach P, Kavan D, Bojarová P,Bezouška K, Macková M, Cantarella M, Jirků V, Křen V,Martínková L (2006) Purification and characterization of a nitrilasefrom Aspergillus niger K10. Appl Microbiol Biotechnol 73:567–575

Kaplan O, Bezouška K, Plíhal O, Ettrich R, Kulik N, Vaněk O, Kavan D,Benada O, Malandra A, Šveda O, Veselá AB, Rinágelová A,Slámová K, Cantarella M, Felsberg J, Dušková J, Dohnálek J, KotikM, Křen V, Martínková L (2011) Heterologous expression, purifi-cation and characterization of nitrilase from Aspergillus niger K10.BMC Biotechnol 11:2

Kaplan O, Vejvoda V, Plíhal O, Pompach P, Kavan D, Bojarová P,Bezouška K, Macková M, Cantarella M, JirkůV, Křen V, MartínkováL (2013a) Purification and characterization of a nitrilase from Asper-gillus niger K10 (vol 73, pg 567, 2006). Appl Microbiol Biotechnol97:3745–3746

Kaplan O, Bezouška K, Plíhal O, Ettrich R, Kulik N, Vaněk O, Kavan D,Benada O, Malandra A, Šveda O, Veselá AB, Rinágelová A,Slámová K, Cantarella M, Felsberg J, Dušková J, Dohnálek J, KotikM, Křen V, Martínková L (2013b) Heterologous expression, purifi-cation and characterization of nitrilase from Aspergillus niger K10(Retraction of vol 11, pg 2, 2011). BMC Biotechnol 13:57

Kaplan O, Veselá AB, Petříčková A, Pasquarelli F, Pičmanová M, RinágelováA, Bhalla TC, Pátek M, Martínková L (2013c) A comparative study ofnitrilases identified by genome mining. Mol Biotechnol 54:996–1003

9264 Appl Microbiol Biotechnol (2013) 97:9263–9264