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EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI [email protected]

EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI [email protected]

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Page 1: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556

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End-User view of the AutoDock Portal

Zoltán Farkas, MTA [email protected]

Page 2: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Access, features

• https://autodock-portal.sztaki.hu/• Aim: provide an easy-to-use docking portal

for biologist• Available login methods:

– Facebook– Create account for yourself

• Hosted applications:– AutoDock– AutoDock Vina

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Page 3: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Backend Infrastructure

• EDGeS@home• Volunteer desktop grid• http://home.edges-grid.eu/• 11000+ users• 18000+ hosts

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Page 4: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Infrastructure overview

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LPDS cloud

EDGeS@homeDG Server

Volunteer

Volunteer

Volunteer

Volunteer

Volunteer

Page 5: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 1 – Log in

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Page 6: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 2 – Import app I.

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Page 7: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 3 – Import app II.

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Page 8: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 4 – Configure I.

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Page 9: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 5 – Configure II.

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Page 10: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 6 – Submit

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Page 11: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 7 – Check Progress

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Page 12: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Step 8 – Get Results

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Page 13: EDGI is supported by the FP7 Capacities Programme under contract nr RI-261556 1 End-User view of the AutoDock Portal Zoltán Farkas, MTA SZTAKI zfarkas@sztaki.hu

End-user view of the AutoDock PortalZoltán Farkas

Live demo

• … or try it for yourself

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