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Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

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Page 1: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Dynamic Generation of Online Interactive Ecosystem Report Cards

Microsoft eScience 2008

Jane Hunter, The University of Qld

Page 2: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

OverviewBackground and ObjectivesArchitecture and ImplementationUser interface and functionalityDemoConclusions and Future Work

Microsoft eScience 2008

Page 3: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Health-e-Waterways ProjectCollaboration between:

Microsoft Research (Catharine van Ingen) Healthy Waterways Partnership (Eva Abal)

DNRW, EPA, Local Councils, Universities University of Qld (Jane Hunter)

3 years funding – MSR, ARC Linkage, SmartState Integrated Water Information Management for

SEQ-HWP

Page 4: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Where are we?Fast growing populationSevere water shortagesSensitive ecosystemsClimate change and drought

Page 5: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Implemented a cost-effective and integrated regional monitoring programme

254 estuarine and marine sites(sampled monthly)127 freshwater sites (sampled 2x/yr)

Page 6: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Health-e-Waterways DatabasesFreshWater EHMP - Dept. Natural

Resources and Water (DNRW)Estuarine Marine EHMP - EPAEvent Monitoring – DNRWManagement Action Database – SEQ-HWPModels – many different sources/locations

Receiving Water, EMSS, E2

Page 7: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Freshwater DataThe data is being captured and managed by DNRW 127 freshwater sites across the catchments.16 Indicators from 5 categories:

Physical and chemical – pH, Conductivity, temp, dissolved O2 Nutrients - Ratio of nitrogen stable isotopes (δ15N), algal growth Ecosystem processes - Algal growth, Ratio of carbon stable

isotopes (δ13C), Benthic respiration (R24) Primary production GPPAquatic macroinvertebrates – No. taxa, PET, SIGNALFish- % of native species expected (PONSE), Observed to expected

native species (O/E50), Proportion of alien fishSurveys are conducted every 6 months, spring and autumn.Survey data stored in Oracle relational database.

Page 8: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Estuarine/MarineThe data is being captured and managed by the Environmental

Protection Agency254 Sites in South East Queensland:

168 sites from 19 estuaries86 from Moreton Bay

14 Indicators :Turbidity , Salinity, Temperature, Dissolved Oxygen, pH, Secchi

depth, Nitrogen, Phosphorus and Chlorophyll.Lyngbya Majuscula (seaweed) cover. Sewage plume mappingCoral Cover

Surveys are conducted monthly, biannually and annually. Survey results will be stored in an Oracle relational database.

Page 9: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Event MonitoringThe data is being captured and managed by the

Dept of NRW 60 to 100 sites across South East QueenslandProprietary software known has HYDSTRA by the

Kisters group is used to store the dataCompressed files store time-series data for each

siteRiver height, Daily Min/Mean/Max flowPollutantsEvents - floods

Supporting information is also stored: E.g. water parameters, survey technicians

Raw data is less useful than interpreted data

Page 10: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Managed by SEQ-HWPTracks Action Plans that are part of the

Healthy Waterways Strategy Approximately 550 actions are stored in the

database2003 Access database:

Access relational tables back-endAccess forms front-end Interface and actions is organised through a 4

tier hierarchy

Management Action Database (MAD)

Page 11: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Many different models used for catchment hydrology

The model simulations forecast and emulate climate scenarios

Written in many different languages for a variety of purposes and users - Fortran

Focus on 3 Models:EMSS (Environmental Management Support

System) Catchment ModelReceiving Water ModelE2

Models

Page 12: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

www.healthywaterways.org

EHMP Estuarine/Marine

EHMP Freshwater

EHMP Event Monitoring

Model scenarios, outputs

Bureau of Meteorology

Landuse

Demography

Etc.

Health-e-Waterways•Web Portal• Water Wiki• VirtualEarth• SensorMap

General PublicExample Query:What will be the ecosystem health outcomes of the implementation of landscape restoration works in the Logan Albert System by 2026?

Management Actions

SEQ Water

State Government

Researchers

Local Governments

Water Resource Managers

RemoteSensors

ScientistsHydrologists

• Data Ontology and Server• Web Services

• Data Integration• Data Lineage• Uncertainty Propagation• Models and Workflows

QCIF Grid Computing &Storage

SECURITY

LAYER

Page 13: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

ApproachStreamline Annual EHMP Report Card GenerationSearch, analysis, reporting interface to integrated

databasesIdentify common conceptual model (ODM, OpenGIS,

WRON-RM)Map datasets to common modelIdentify optimum data harvesting and storage

Store in SQLServer DB or Jena Web services interface to in-situ dataMetadata harvesting -> central catalogue

Develop VirtualEarth+ontology-based query interface

Page 14: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

What

Publicised output of the SEQ Healthy Waterways Partnership

Easy-to-understand snapshot of ecosystem health

A to F

Provides an insight into the effectiveness of investments in waterway and catchment management

Split into two reporting zones, freshwater and estuarine/marine

Each has it’s own objectives, parameters, methods and analysis

What is the Report Card?

Page 15: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Annual Ecosystem Report Cards

2001 2002 2003 2004 2005 2006 2007C # C # B+ # C C+ C- C-

Spring 2005 (Run 7) Autumn 2006 (Run 8)

Spring 2006 (Run 9) Autumn 2007 (Run 10)

-0.50

-0.30

-0.10

0.10

0.30

0.50

Mean-0.50

-0.30

-0.10

0.10

0.30

0.50

MeanMean

FRESHWATER REPORT CARD GRADESPumicestone CatchmentGrade history:# combined grade for Caboolture-Pumicestone catchments

snapshot of ecosystem health

A to F

insight into the effectiveness of investments in catchment management

Page 16: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

How

How is the Report Card Used?

How the Report Card is Used

Page 17: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
Page 18: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Common EHMP Ontology

Page 19: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Triple Store

Web Services

Statistical Processing

Reasoning Client

Silverlight & Virtual Earth Client

Interactive Ecosystem Report Card Application

EHMP Ontology

Remote Sensor

Reasoning Engine

Administrator

SPARQL Query Client

EHMP Databases

Jena .NET Plugin

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Page 22: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
Page 23: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
Page 24: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
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Page 26: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
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OutcomesCommon Observational Data Model

ODM 2.0?Water data, climate data, vegetation, species distribution,

satellite imageryFramework for Semantic Integration of Ecosystem Health

Monitoring DataICT Framework for Web-based Environmental Reporting

Standardized methods for measuring and aggregating indicators -> Ecosystem reports

Comparison and longitudinal trendsWentworth Group – “an exemplar for environmental

reporting”

Page 28: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
Page 29: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Future WorkLink monitoring data to management actions Integration of:

• MODIS satellite data, BoM climate data• Real-time sensor data• Community data – ReefCheck, CoralWatch, Caring for

Country• Socio-economic data - demographics

Extend to Great Barrier Reef /Centre for Marine StudiesAnalytical services

correlate ground data to derived data from satellite imagesLinking predictive models to integrated datasetsVisualizations of model outputEstimate uncertainty/reliability of results

Ranked search results

Page 30: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld
Page 31: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

User-Driven/Ontology-based Spatio-temporal QueriesCombine monitoring data + Model outputs + socio-

economic models/data

“How will the mandatory adoption of rainwater tanks in the Logan Region effect domestic water requirements in 5 years time, taking into account the effects of climate change and population growth in the region?”

“What impact will a $20mill sewage treatment plant upgrade have on on the prawn industry in the Logan Estuary if implemented now?”

Page 32: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

AcknowledgementsAbdul Alabri – University of QldMicrosoft Research – Catharine van Ingen, Bora BeranHealthy Waterways Partnership – Eva Abal, Jo Burton, Dave

MoffatCUAHSI – Dave Maidment, Michael PiaseckiCSIRO – Simon Cox, AWRIS

Page 33: Dynamic Generation of Online Interactive Ecosystem Report Cards Microsoft eScience 2008 Jane Hunter, The University of Qld

Questions?http://www.health-e-waterways.org/

Contact: [email protected]