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DOE Bioenergy Technologies Office (BETO) 2019 Project Peer Review A comprehensive strategy for stable, high productivity cultivation of microalgae with controllable biomass composition 03/05/2019 Advanced Algal Systems Sridhar Viamajala University of Toledo This presentation does not contain any proprietary, confidential, or otherwise restricted information

DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

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Page 1: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

DOE Bioenergy Technologies Office (BETO)

2019 Project Peer Review

A comprehensive strategy for stable, high

productivity cultivation of microalgae with

controllable biomass composition

03/05/2019

Advanced Algal Systems

Sridhar Viamajala

University of Toledo

This presentation does not contain any proprietary, confidential, or otherwise restricted information

Page 2: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

Goal Statement• Goal: Develop cultivation approaches that use high-pH and high-

alkalinity media for (1) high rates of atmospheric CO2 capture and (2)

providing non-limiting dissolved inorganic carbon (DIC) concentrations

for growth.

• Outcome: High biomass and biofuel-precursor productivities in

outdoor open ponds using atmospheric CO2 alone.

• Relevance:

– Our project seeks to eliminate the cost and site-location constraints

posed by supply of concentrated CO2 to microalgae farms while

simultaneously achieving high seasonal productivities.

– Our project will contribute to the development of diverse molecular biology

toolkits for use by the algal research community

• Algae community analysis/dynamics – To assess the development and

structure of stable microbial communities that contribute to productivity

• Transcriptomic and metabolomic analysis – To map and ultimately control the

responses of microalgae cultures

• Metabolic network model – To predict genome editing targets in-silico

• CRISPR/Cas9-based genome editing – To improve carbon flow to biofuel and

bioproduct precursors 2

Page 3: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

Quad Chart Overview

Timeline• Start date: 09/30/2017

• End date: 09/29/2021

• Percent complete - 5%

3

FY 18 Costs Total Planned Funding (FY 19-Project End Date)

DOE Funded

$ 30,400 $ 2,866,276

Project

Cost

Share*

$ 2,100 $ 496,878

•Partners: Montana State University (44%); University of North Carolina at Chapel Hill (13%)

Barriers addressedAft‐A. Biomass Availability and Cost

Aft-B. Sustainable Algae Production

Aft‐C. Biomass Genetics and Development

Objective

Develop high productivity algal biofuel systems that are not constrained by CO2 costs or availability of concentrated CO2

End of Project Goal

18 g/m2/d AFDW over a 4 week cultivation period in 4.2 m2 outdoor ponds without CO2 sparging or pH control.

Page 4: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

Calvin

Cycle

Carbon Concentrating

Mechanisms (CCM)

Project Overview/Objectives

4

1. Improve scale and productivity

of algal cultures cultivated in

high-pH and high-alkalinity

media.

2. Improve biomass

composition for

improved biofuel

productivity

3. Develop

molecular biology

toolkits

Page 5: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

Advantages• Advantage 1: Harsh pH conditions (pH>10) can

mitigate detrimental microbial contamination and

predator populations • e.g. Daphnia (zooplankton) egg and neonate viability is low

5

pH = 8.5 pH = 10.2

Vijverberg, J. et al. (1996). Decrease in Daphnia egg viability at elevated pH. Limnology and Oceanography, 41: 789-794.

Vadlamani, A. et al. (2017). ACS Sustainable Chemistry & Engineering, 5: 7284-7294. DOI: 10.1021/acssuschemeng.7b01534

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Advantages• Advantage 2: Alkaline solutions scavenge CO2 from

the atmosphere at rapid rates.

– Costs and geographical constraints associated with CO2

supply can be mitigated (or eliminated)

6(1) Davis, R., et al. (2016) Technical Report NREL/TP-5100-64772; Huntley, M.E., et al. (2015) Algal Research, 10: 249-265; (3) Quinn, J. C., et al. (2012).

BioEnergy Res. 6: 591-600; (4) Bracmort, K. (2014). Congressional Research Service Report 7-5700. https://www.fas.org/sgp/crs/misc/R42122.pdf

Max. biofuel

production with CO2

supply constraints

= 44 million barrels

per year

EISA mandate for non-

cellulosic advanced

biofuel

= 100 million

barrels per year

210 $/ton

101 $/ton

22 $/ton

90 $/ton

Ponds + InoculumOPEX costsNutrientsCO2

Cost components for

microalgae cultivationGeographical constraints based on

simultaneous CO2 and land availability

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2 - Approach (Management)

• Team

– Sridhar Viamajala: Biochemical engineering - Cultivation and scale-up

– Sasidhar Varanasi: Chemical engineering – Mass transfer modeling

– Robin Gerlach: Biochemical engineering – Cultivation and nutrient management

– Ross Carlson – Chemical Engineering – Metabolic flux modeling

– Brent Peyton – Biochemical engineer – Cultivation and scale-up

– Matthew Fields – Microbiology – Microbial ecology

– Blake Wiedenheft – Molecular biology – Gene editing

– Greg Characklis – Environmental Engineering - Resource management, Economics

– Jordan Kern – Environmental Engineering - Sustainability and Life Cycle Assessment

• History– Ongoing collaborations for >10 years

– Builds on recently concluded DOE ASAP project – resulted in 21 journal publications (~10 more

in preparation); 9 patents (8 awarded and 1 pending); numerous presentations

• Interactions– PIs, students and postdocs participate in biweekly team conference calls – milestone

discussions and research updates

– Annual team meetings at ABS

– Student exchange, PI visits, numerous phone/email conversations7

Page 8: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

2 - Approach (Technical)Developing a mathematical framework

8

Mass transfer flux:

,

,

,

Bulk reactions:

(from atm)

Danckwerts, P.V., (1970) Gas-liquid reactions. McGraw-Hill Book Co.

Weissman, J.C., et al. (1988). Photobioreactor design: Mixing, carbon

utilization, and oxygen accumulation. Biotech. Bioeng. 31: 336-344.

Page 9: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

2 - Approach (Technical)Developing a mathematical framework

9

Mass transfer flux:

,

,

,

Bulk reactions:

(from atm)

Danckwerts, P.V., (1970) Gas-liquid reactions. McGraw-Hill Book Co.

Weissman, J.C., et al. (1988). Photobioreactor design: Mixing, carbon

utilization, and oxygen accumulation. Biotech. Bioeng. 31: 336-344.

𝑱𝑪𝑶𝟐 = CO2 transfer flux (mol/m2/h)

[𝑪𝑶𝟐(𝒂𝒒)∗ ] = Dissolved CO2 concentration in

equilibrium with the atmosphere;

calculated from Henry’s constant.

[𝑪𝑶𝟐(𝒂𝒒)𝒃𝒖𝒍𝒌 ] = Aqueous CO2 concentration;

determined by the equilibrium

established with HCO3-, OH- and CO3

2-

in the medium (Eq. 1 & 2)

=𝐾2

𝐾1×

𝐻𝐶𝑂3− 2

𝐶𝑂32−

𝒌𝑳 = Mass transfer coefficient; governed by

mixing rates and pond depth

= 0.1 m/h for 20 cm ponds mixed at 30 cm/s

𝑬 = Enhancement factor for mass transfer

due to chemical reaction;

= 1+𝒟𝑂𝐻−∙𝒟𝐻𝐶𝑂3

−∙𝐾1∙ 𝑂𝐻−

𝒟𝐶𝑂2(𝐾1∙[𝐶𝑂2 𝑎𝑞∗ ]∙𝒟𝐻𝐶𝑂3

−+𝒟𝑂𝐻−)

where, the subscripted 𝒟’s represent diffusion

coefficients of the various dissolved species

Page 10: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

2 - Approach (Technical)Developing a mathematical framework

10

Mass transfer flux:

,

,

,

Bulk reactions:

(from atm)

Danckwerts, P.V., (1970) Gas-liquid reactions. McGraw-Hill Book Co.

Weissman, J.C., et al. (1988). Photobioreactor design: Mixing, carbon

utilization, and oxygen accumulation. Biotech. Bioeng. 31: 336-344.

𝑱𝑪𝑶𝟐 = CO2 transfer flux (mol/m2/h)

[𝑪𝑶𝟐(𝒂𝒒)∗ ] = Dissolved CO2 concentration in

equilibrium with the atmosphere;

calculated from Henry’s constant.

[𝑪𝑶𝟐(𝒂𝒒)𝒃𝒖𝒍𝒌 ] = Aqueous CO2 concentration;

determined by the equilibrium

established with HCO3-, OH- and CO3

2-

in the medium (Eq. 1 & 2)

=𝐾2

𝐾1×

𝐻𝐶𝑂3− 2

𝐶𝑂32−

𝒌𝑳 = Mass transfer coefficient; governed by

mixing rates and pond depth

= 0.1 m/h for 20 cm ponds mixed at 30 cm/s

𝑬 = Enhancement factor for mass transfer

due to chemical reaction;

= 1+𝒟𝑂𝐻−∙𝒟𝐻𝐶𝑂3

−∙𝐾1∙ 𝑂𝐻−

𝒟𝐶𝑂2(𝐾1∙[𝐶𝑂2 𝑎𝑞∗ ]∙𝒟𝐻𝐶𝑂3

−+𝒟𝑂𝐻−)

where, the subscripted 𝒟’s represent diffusion

coefficients of the various dissolved species

Page 11: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

2 - Approach (Technical)Developing a mathematical framework

11

Mass transfer flux:

,

,

,

Bulk reactions:

(from atm)

Danckwerts, P.V., (1970) Gas-liquid reactions. McGraw-Hill Book Co.

Weissman, J.C., et al. (1988). Photobioreactor design: Mixing, carbon

utilization, and oxygen accumulation. Biotech. Bioeng. 31: 336-344.

𝑱𝑪𝑶𝟐 = CO2 transfer flux (mol/m2/h)

[𝑪𝑶𝟐(𝒂𝒒)∗ ] = Dissolved CO2 concentration in

equilibrium with the atmosphere;

calculated from Henry’s constant.

[𝑪𝑶𝟐(𝒂𝒒)𝒃𝒖𝒍𝒌 ] = Aqueous CO2 concentration;

determined by the equilibrium

established with HCO3-, OH- and CO3

2-

in the medium (Eq. 1 & 2)

=𝐾2

𝐾1×

𝐻𝐶𝑂3− 2

𝐶𝑂32−

𝒌𝑳 = Mass transfer coefficient; governed by

mixing rates and pond depth

= 0.1 m/h for 20 cm ponds mixed at 30 cm/s

𝑬 = Enhancement factor for mass transfer

due to chemical reaction;

= 1+𝒟𝑂𝐻−∙𝒟𝐻𝐶𝑂3

−∙𝐾1∙ 𝑂𝐻−

𝒟𝐶𝑂2(𝐾1∙[𝐶𝑂2 𝑎𝑞∗ ]∙𝒟𝐻𝐶𝑂3

−+𝒟𝑂𝐻−)

where, the subscripted 𝒟’s represent diffusion

coefficients of the various dissolved species

Page 12: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

2 - Approach (Technical)Developing a mathematical framework

12

Mass transfer flux:

,

,

,

Bulk reactions:

(from atm)

Danckwerts, P.V., (1970) Gas-liquid reactions. McGraw-Hill Book Co.

Weissman, J.C., et al. (1988). Photobioreactor design: Mixing, carbon

utilization, and oxygen accumulation. Biotech. Bioeng. 31: 336-344.

𝑱𝑪𝑶𝟐 = CO2 transfer flux (mol/m2/h)

[𝑪𝑶𝟐(𝒂𝒒)∗ ] = Dissolved CO2 concentration in

equilibrium with the atmosphere;

calculated from Henry’s constant.

[𝑪𝑶𝟐(𝒂𝒒)𝒃𝒖𝒍𝒌 ] = Aqueous CO2 concentration;

determined by the equilibrium

established with HCO3-, OH- and CO3

2-

in the medium (Eq. 1 & 2)

=𝐾2

𝐾1×

𝐻𝐶𝑂3− 2

𝐶𝑂32−

𝒌𝑳 = Mass transfer coefficient; governed by

mixing rates and pond depth

= 0.1 m/h for 20 cm ponds mixed at 30 cm/s

𝑬 = Enhancement factor for mass transfer

due to chemical reaction;

= 1+𝒟𝑂𝐻−∙𝒟𝐻𝐶𝑂3

−∙𝐾1∙ 𝑂𝐻−

𝒟𝐶𝑂2(𝐾1∙[𝐶𝑂2 𝑎𝑞∗ ]∙𝒟𝐻𝐶𝑂3

−+𝒟𝑂𝐻−)

where, the subscripted 𝒟’s represent diffusion

coefficients of the various dissolved species

Page 13: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

High media alkalinity increases availability of HCO3-

Under highly alkaline conditions, DIC is transported by CCMs

High media DIC increases rate of cellular DIC transport

Simultaneously, the high cellular DIC flux allows light dependent reactions

towards higher production of NADPH for use in carbon fixation.

13

Light dependent reactions

Light independent reactions

Chloroplast

Stroma

Thylakoid

Cytosol

ATP ATP ATP

RUBisCO3PGA

Calvin cycle

PS I Fd

e-

NO3-

O2

2H2O4H+ + O2

PS II

4e-

e-

NADP+ NADPH

Cyclic electron transport

e-e-

e-

e-

Fluorescenc

e and NPQ

CA

H7 C

AH

9

CA

H3

– indicates upregulation of process in the

presence of high media DIC

- indicates carbonic anhydraseCA

ATP

CA

H1 C

AH

2

CA

H6

Periplasmic space

Moroney, J. V. and Ynalvez, R. A. (2007) Proposed CO2 concentrating mechanism in Chlamydomonas reinhardtii. Eukaryotic Cell. 6: 1251-1259.

Vadlamani, A. et al. (2019). High Productivity Cultivation of Microalgae without Concentrated CO2 Input. ACS Sustainable Chemistry & Engineering,

7: 1933-1943. DOI: 10.1021/acssuschemeng.8b04094

Page 14: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

14

CO2 transfer from the atmosphere into alkaline media

-100

-50

0

50

100

150

0

20

40

60

80

100

9 9.4 9.8 10.2 10.6

CO

2fl

ux

(m

mo

le/m

2/h

)

En

han

cem

ent

fact

or

(E)

pH

Enhancement

factor (E)Mass transfer

rate

-15

-10

-5

0

5

10

15

0

20

40

60

80

100

9 9.4 9.8 10.2 10.6

(mm

ole

/m3)

Bic

arb

on

ate

(mM

)

pH

Bicarbonate

Mass transfer

driving force

Vadlamani, A. et al. (2019). High Productivity Cultivation of Microalgae without Concentrated CO2 Input. ACS Sustainable Chemistry & Engineering,

7: 1933-1943. DOI: 10.1021/acssuschemeng.8b04094

[𝐶𝑂

𝑎

∗]−[𝐶𝑂

𝑎

𝑏𝑢𝑙𝑘]

Page 15: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

15

CO2 transfer from the atmosphere into alkaline media

-100

-50

0

50

100

150

0

20

40

60

80

100

9 9.4 9.8 10.2 10.6

CO

2fl

ux

(m

mo

le/m

2/h

)

En

han

cem

ent

fact

or

(E)

pH

Enhancement

factor (E)Mass transfer

rate

-15

-10

-5

0

5

10

15

0

20

40

60

80

100

9 9.4 9.8 10.2 10.6

(mm

ole

/m3)

Bic

arb

on

ate

(mM

)

pH

Bicarbonate

Mass transfer

driving force

To maintain high atmospheric CO2 flux

and allow growth without concentrated

CO2 input

Maximize mass transfer driving force

([𝐶𝑂 𝑎 ∗ ] − [𝐶𝑂 𝑎

𝑏𝑢𝑙𝑘 ])

High media alkalinity to maintain high

HCO3- concentrations in the medium for

photosynthesis to occur without inorganic

carbon limitations

Maximize enhancement factor (𝐸) by

maintaining high pH; E~40 at pH 10.2

E indicates improvement in CO2 dissolution

rate due to acid-base reaction between CO2

and OH-

40mmole/m2/h = 11.5 g-C/m2/d

= 25 g-biomass/m2/d

(45% carbon content)

Vadlamani, A. et al. (2019). High Productivity Cultivation of Microalgae without Concentrated CO2 Input. ACS Sustainable Chemistry & Engineering,

7: 1933-1943. DOI: 10.1021/acssuschemeng.8b04094

[𝐶𝑂

𝑎

∗]−[𝐶𝑂

𝑎

𝑏𝑢𝑙𝑘]

Page 16: DOE Biomass RDD Review Template - Energy.gov · Mass transfer rate-15-10-5 0 5 10 15 0 20 40 60 80 100 9 9.4 9.8 10.2 10.6 (ole /m 3) M) pH Bicarbonate Mass transfer driving force

0

0.5

1

1.5

2

2.5

0

0.2

0.4

0.6

0.8

1

0 2 4 6 8 10 12 14 16 18

Solu

ble

N (

mM

)

Bio

ma

ss c

on

cen

tra

tion

(g

/L)

Time (d)

Biomass

Soluble N

(a)

0

2

4

6

8

10

12

14

9.5

10

10.5

11

11.5

0 2 4 6 8 10 12 14 16 18

To

tal

alk

ali

nit

y (

mM

)

pH

Time (d)

pHTotal alkalinity

(b)

0

2

4

6

8

10

0 2 4 6 8 10 12 14 16 18

Bic

arb

on

ate

, D

IC (

mM

)

Time (d)

DIC

Bicarbonate

(c)

0.1

Chlorella sp. IFRPD

Chlorella sp. ZJU0204

Chlorella sorokiniana

Chlorella vulgaris str. UTEX2714

8519

1183

Chlorella sp. ZJU0205

Chlorella sp. SSKV1

Chlorella sorokiniana str. UTEX 246

SLA-04

10000

5854

Chlorella sorokiniana isolate 34-2

Chlorella thermophila str. ITBB HTA1-65

Chlorella sp. TISTR 8990

10000

8745

10000

5344

Isolation, identification and initial cultivation of strain SLA-04

16

Isolated from Soap Lake, WA

Initial raceway pond cultivation (30 L, 0.18 m2)

in high pH, but low alkalinity media resulted in

low productivity (6-8 g-AFDW/m2/d)

Low HCO3- concentrations were suspected to

be the reason for low productivityVadlamani, A. et al. (2017). Cultivation of Microalgae at Extreme Alkaline pH Conditions:

A Novel Approach for Biofuel Production. ACS Sustainable Chemistry & Engineering, 5:

7284-7294. DOI: 10.1021/acssuschemeng.7b01534

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Cultivation in high pH and high alkalinity

media – 0.18 m2 raceway ponds

17

Experiments were performed in 0.18 m2 (30 L) raceway ponds – July and August

Without concentrated CO2 inputs in high alkalinity media (40-60 meq/L), Average areal productivities were 22 g-AFDW/m2/d

Maximum productivity of 32 g-AFDW/m2/d was measured.

Average productivities of cultures grown without concentrated CO2 inputs

were similar to productivities of cultures grown with concentrated CO2

input (pH maintained at 8.5).

0

10

20

30

40

7 15 20 40 60 10* 20* 30*

AF

DW

pro

du

cti

vit

y

(g/m

2/d

ay

)

Culture medium alkalinity (meq/L)

Average productivity Maximum productivity

Cultivation on atmospheric

CO2 and without pH control

With external CO2

Input for pH control

Vadlamani, A. et al. (2019). High Productivity Cultivation of Microalgae without Concentrated CO2 Input. ACS Sustainable Chemistry & Engineering,

7: 1933-1943. DOI: 10.1021/acssuschemeng.8b04094

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Cultivation in high pH and high alkalinity media - 30 L

raceway ponds

18

• Cultures growing at pH>10 and in the presence of high media HCO3-

show high ETRmax, Y(II), and α values.

– Better utilization of incident light for photosynthetic carbon fixation

• Cultures growing in low HCO3- media (pH>10) show high dissipation

of electrons (cyclic electron transport)

– Electron generation is inhibited due to low availability of cellular DIC.

• Maximum quantum yield (Fv/Fm) was not affected by HCO3-

concentrations

Energy flow Description NotationHigh HCO3

-

(65 mM)

Low HCO3-

(7 mM)

Towards carbon

fixation

Effective PS II quantum yield

(photons utilized per incident photons)Y(II) 0.37 0.23

Photosynthetic efficiency

(electrons per photon)α 0.16 0.10

Maximum electron transfer rate

(µmole/m2/s)ETRmax 20 15

Dissipation

Total regulated + unregulated dissipation

(photons dissipated per incident photon)Y(NPQ) + Y(NO) 0.65 0.78

Maximum quantum yield Fv/Fm 0.7 0.7

Vadlamani, A. et al. (2019). High Productivity Cultivation of Microalgae without Concentrated CO2 Input. ACS Sustainable Chemistry & Engineering,

7: 1933-1943. DOI: 10.1021/acssuschemeng.8b04094

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Raceway pond cultivation in 4.2 m2 ponds

• Biomass productivity (until N depletion)

– 18 g-AFDW/m2/day (7″ ponds)

– 10.4 g-AFDW/m2/day (10″ ponds) 19

8.50

8.70

8.90

9.10

9.30

9.50

9.70

9.90

10.10

10.30

0.20

0.25

0.30

0.35

0.40

0.45

0.50

0.55

0.60

0 2 4 6 8 10

pH

Bio

mas

s co

ncen

trat

ion

(g·L

-1)

Time (d)

Biomass

pH

0

20

40

60

80

100

120

140

0 2 4 6 8 10

Co

ncetr

atio

n (

mM

)

T ime (d)

TA DIC

0

1

2

3

4

5

6

7

8

9

0.00

0.05

0.10

0.15

0.20

0.25

0.30

0 2 4 6 8 10

Solu

ble

N

(m

g·L

-1)

FA

ME

s (g

·L-1

),T

ota

l ca

rbohy

dra

tes

(g·L

-1)

Time (d)

FAMEs

Total carbohydrates

Soluble N

(b)

(a)

8.5

8.7

8.9

9.1

9.3

9.5

9.7

9.9

10.1

10.3

0.25

0.35

0.45

0.55

0.65

0.75

0.85

0 2 4 6 8 10 12

pH

Bio

mas

s co

ncen

trat

ion

(g·L

-1)

Time (d)

Biomass

pH 0

50

100

150

200

0 2 4 6 8 10 12

Co

nce

ntr

atio

n (m

M)

T ime (d)

TA DIC

0

2

4

6

8

10

12

0.00

0.02

0.04

0.06

0.08

0.10

0.12

0.14

0.16

0.18

0.20

0 2 4 6 8 10 12

Solu

ble

N

(m

g·L

-1)

FA

ME

s (g

·L-1

),T

ota

l C

arbohy

dra

tes

(g·L

-1)

Time (d)

FAMEs

Total Carbohydrates

Soluble N

(b)

(a)

10-inch deep ponds 7-inch deep ponds

• Lipid productivity (overall) = 1.7 to 2 g/m2/day

• Carbohydrate productivity (overall) = 1.6 to 3.4

g/m2/day

Vadlamani, A. et al. (2019). High Productivity Cultivation of Microalgae without Concentrated CO2 Input. ACS Sustainable Chemistry & Engineering,

7: 1933-1943. DOI: 10.1021/acssuschemeng.8b04094

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0

5

10

15

20

25

30

1 2 3

Bio

mass

(g/m

2/d

)

Batch number

Low-Ca medium

Low-Mg medium

Standard BG-11 medium

0

5

10

15

20

1 2 3

FA

ME

% (w

/w)

Batch number

0

10

20

30

1 2 3Ca

rbo

hy

dra

te %

(w

/w)

Batch number20

3 – Technical Accomplishments/ Progress/Results

• “Go” decision from “DOE verification” into BP2.

– BP2 started in October 2018

– Subcontract awards made in Nov-Dec 2018

– Personnel hiring partially complete – graduate students hired; post doc interviews are in-progress

• Task 1 – Productivity and composition improvements through improvements in cultivation methods

– Multi-season experiments started

• Task 2 – Modeling CO2 mass transfer in high-pH/alkalinity media

– Initial model developed; Experiments for enhancement of mass transfer with borate as “rate-promoter” are in-progress.

Raceway pond experiments in low-Ca and low-

Mg media (0.18 m2, 20 L raceway ponds).

Biomass, FAME

and carbohydrate

productivities are

higher in low-Ca

and low-Mg media

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21

3 – Technical Accomplishments/ Progress/Results

• Task 3 - Algal community dynamics– Evaluated methods to separate tightly and loosely associated prokaryotic community

members from SLA-04 cells; Biomass collected for DNA extraction.

• Task 4 - Transcriptomics/metabolomics – Antibiotic cocktail being tested to obtain axenic SLA-04 cultures for sequencing;

ongoing discussions with the Greenhouse leadership at LANL regarding DNA extraction, preparation and sequencing

• Task 5 - Metabolic flux modeling– Modeling efforts initiated based on previous MSU co-PI Ross Carlson’s work with P.

tricornutum

• Task 6 - CRISPR/Cas9-based genome editing– Potential gene editing targets identified - 1. AMP kinase (AMPK), 2. Lactate

dehydrogenase, 3. Acetate kinase, and 4. Phosphotransacetylase

– Additionally, nitrate reductase identified for proof-of-principle study based on the publicly available genome information of UTEX 395

– Guide RNAs were designed using a combination of tools necessary for Cas9 binding.

– Guides were evaluated for predicted activity and crosschecked for their potential for off-target cleavage.

• Task 7 - Process economics and LCA – A time-dynamic, stochastic weather component is being developed for integration into

existing TEA/LCA model. The meteorological model has been calibrated with historical air temperature, windspeed, relative humidity and solar loss data.

– Model will forecast algae production and project revenues due to seasonal and year-to-year changes in biomass productivity

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22

4 – Relevance• Goal: The goal of this project is to develop cultivation approaches that

use high-pH and high-alkalinity media for (1) high rates of atmospheric

CO2 capture and (2) providing non-limiting dissolved inorganic carbon

(DIC) concentrations for growth.

• When successful, the project will – De-couple microalgae biofuels production from CO2 sources and significantly expand possible

geographical locations for cultivation

– Decrease the cost of microalgae cultivation

– Develop toolkits for broad use by the microalgae community

• Directly supports BETO’s goals– Increase the mature modeled value of cultivated algal biomass by 30% over the

2015 SOT baseline.

– Develop strain improvement toolkits that enable algae biomass compositions in

environmental simulation cultivation conditions that represent an energy content and

convertibility of 80 GGE of advanced biofuel per AFDW ton of algae biomass.

• Reduction in biofuel costs are driven by– Reduction in cost of CO2 supply

– Improved culture stability through lower susceptibility to microbial contamination and

predator attacks

– Higher productivity through strain improvements

• Utility patent application US/15/498,621 filed 04-27-17.

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23

5 - Future Work1. Improve scale and productivity of algal cultures cultivated in alkaline media.

a) Without concentrated CO2 inputs

b) Multi scale experiments across seasons – 500 mL e-PBRs, 30 L raceway ponds,

1000 L raceway ponds

c) Productivity enhancements through

• media optimization

• targeted genetic improvements based on genome, transcriptome analysis and metabolic

flux modeling

• Understanding and ultimately controlling microbial ecology

2. Improve biomass composition for improved biofuel productivity

a) Control of media conditions

b) Additional strategies will be guided by microbial ecology and -omics data

3. Toolkit development

a) quantification of microbial interactions and enrichment of productive communities

b) publication of a well-annotated genome of a highly productive algal strain

c) insights into regulatory mechanisms (transcript response) of algal cells grown at

high alkalinities

d) development of a metabolic network model to inform genome editing approaches

for strain improvement

e) development of genome editing approaches based on the CRISPR-Cas9

technology

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LCA/TEA Modeling in Support of PEAK

Photobioreactors

Open raceway ponds

30

20

10

0Bio

fuel C

ost ($

/gal)

Source:

Quinn and Davis, 2015

Estimates from Literature

National lab

harmonization

BaselineExpanded

Scenarios

Special Features: Dynamic Economic and Weather InputsPond

Temperatures Biophysical

Model

24

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LCA/TEA Modeling in Support of PEAK

Benefits of air capture of CO2 vs. risks of co-locating with power plants under regulatory and technological change

Quantifying tradeoffs between mixing energy requirements and CO2 costs in high pH, high alkalinity systems

More

renewables &

natural gas,

less coal

25

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26

Major milestones• Milestone 2.2.1: Develop and validate comprehensive CO2 mass transfer

model in alkaline media for non-isothermal conditions. (Q6)

• Milestone 7.2.1: Identify and evaluate risk management approaches under

uncertainty related to price of competitive fuels, subsidies and physical or

natural inputs. (Q7)

• Go/no-go: Demonstrate the potential for production of >1200 GGE/acre/year.

(Q7)

• Milestone 5.1.1: In silico reconstruction of SLA-04 metabolic potential with

partitioning of activity between cytosol, mitochondria and plastids. (Q8)

• Milestone 3.2.1: Determine active microbial populations that develop in the

outdoor SLA-04 cultures. (Q9)

• Milestone 4.2.1: Elucidate expressed genes unique to enriched pool of high-

productivity populations.(Q10)

• Milestone 6.3: Isolate one or more isogenic gene-edited mutants and test for

novel phenotypes. (Q11)

• Milestone 1.3.1: Demonstrate a biofuel intermediate productivity >1500

GGE/acre/year. (Q12)

• Milestone 3.2.2: Correlate microbial community structure to SLA-04 culture

productivity. (Q13)

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27

Summary

• High media pH (>10) drives rapid transfer of CO2 from the

atmosphere to growth media

• High DIC concentrations “buffer” the media and allow high

media concentration of HCO3-

– Improves “electron transfer rates” – Likely due to higher rate of

delivery of CO2 to RuBisCO

• Under high-pH AND high-alkalinity conditions, cultures

achieve high productivity even in the absence of

concentrated CO2 inputs.

• In cultivation experiments over 2 years, we haven’t

observed a “culture crash”

• Biomass composition can be improved by “adjusting”

nutrient composition without significantly compromising

biomass productivity

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28

Additional Slides

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29

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Composition analysis – Mass

balance closure

Experiment DayFAMEs

(%(w∙w-1))

Total

carbohydrate

(%(w∙w-1))

Protein*

(%(w∙w-1))

Nucleic

acids**

(%(w∙w-1))

ASH content

(%(w∙w-1))Total

4.2 m2, 10″

depth

Day 0 7.8 ± 0.6 33.7 ± 2 17.25

18.1 ± 0.5 81.8 ± 3.3

Day 10 17 ± 0.15 42.9 ± 1 14.6 ± 0.02 7.5 ± 0.5 87.0 ± 1.2

4.2 m2, 7″

depth

Day 0 7.1 20.3 36.7

5

18.7 87.8

Day 5 14.6 20.1 32.1 9.5 81.3

Day 12 21.8 25 27.5 8.8 88.1*Protein content was estimated using a conversion factor of 5.04.**Nucleic acid content was obtained from literature 9.

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Photosynthesis parameters

0.1

0.15

0.2

0.25

0.3

0.35

0.4

0 10 20 30 40 50 60 70

Quan

tum

yie

ld (

Y (

II))

Bicarbonate (mM)

(c)

0

0.02

0.04

0.06

0.08

0.1

0.12

0.14

0.16

0.18

0 10 20 30 40 50 60 70

α(e

-gen

erat

ed p

er p

hoto

n)

Bicarbonate (mM)

(d)

0.6

0.65

0.7

0.75

0.8

0.85

0.9

0 10 20 30 40 50 60 70

Tota

l quen

chin

g

Bicarbonate (mM)

(b)

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0 10 20 30 40 50 60 70

Fv/F

m

Bicarbonate (mM)

(a)

0

5

10

15

20

25

0 10 20 30 40 50 60 70

ET

Rm

ax(μ

mole

·m-2

·s-1

)

Bicarbonate (mM)

(e)

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Algae moves with injection Holding pipette