6
Vol. 57, No. 2 APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Feb. 1991, p. 389-394 0099-2240/91/020389-06$02.00/0 Copyright C 1991, American Society for Microbiology Comparative Study of a DNA Hybridization Method and Two Isolation Procedures for Detection of Yersinia enterocolitica 0:3 in Naturally Contaminated Pork Products TRULS NESBAKKEN,l 2* GEORG KAPPERUD,3 KARI DOMMARSNES,2 MIKAEL SKURNIK,4 AND ERIK HORNES5 Norwegian Meat Research Laboratory, P.O. Box 96, Refstad, 0513 Oslo 5,1* Department of Bacteriology, National Institute of Public Health, 0462 Oslo 4,3 Department of Food Hygiene, Norwegian College of Veterinary Medicine, 0033 Oslo 1,2 and Apothekenes Laboratorier AIS, 0275 Oslo 2,5 Norway, and Department of Medical Microbiology, Turku University, SF-20520 Turku, Finland4 Received 17 September 1990/Accepted 3 December 1990 We compared a DNA-DNA hybridization assay, using a synthetically produced oligonucleotide probe, and two conventional isolation procedures (methods A and B) with regard to their relative efficiency in detecting Yersinia enterocolitica 0:3 in naturally contaminated pork products. Method A was as described by Wauters et al. (Appl. Environ. Microbiol. 54:851-854, 1988). Method B has been recommended by the Nordic Committee on Food Analysis (method no. 117, 1987). The genetic probe was used in a colony hybridization assay to detect virulent yersiniae at each of the isolation steps which composed methods A and B. A total of 50 samples of raw pork products obtained from 13 meat-processing factories in Norway were examined. Y. enterocolitica serogroup 0:3, biovar 4, was isolated from altogether 9 (18.0%) of the samples by using the two isolation procedures. In contrast, colony hybridization using the genetic probe indicated that 30 (60.0%) of the samples contained virulent yersiniae. All samples which were positive on cultivation were also positive by hybridization. The results indicate that the occurrence of pathogenic Y. enterocolitica in Norwegian pork products is substantially higher than previously demonstrated and, therefore, reinforce our suggestion that pork products represent an important potential source of human infection in Norway. The results also indicate that the use of conventional isolation procedures may lead to considerable underestimation of pathogenic Y. enterocolitica in pork products. There is strong indirect evidence that swine constitute an important reservoir for human infection with Yersinia en- terocolitica (5, 7, 14, 23). Numerous surveys have shown that swine may be healthy carriers of serogroups 0:3 and 0:9, belonging to the same biovars and phagevars as those involved in human disease (14, 23). The pig is the only food animal which regularly harbors pathogenic Y. enterocolitica. In contrast, serogroup 0:8, the predominant human patho- gen in the United States, appears to be rare in swine. 0:8 may have an entirely different reservoir(s) and ecology (23). In addition to their function as fecal commensals, serogroups 0:3 and 0:9 also inhabit the oral cavities of swine, espe- cially the tongue and tonsils. The bacteria are also frequently encountered as surface contaminants on freshly slaughtered pig carcasses. In Belgium, which is the country with the highest reported incidence of Y. enterocolitica infection, a case-control study has shown that the infection is strongly associated with the consumption of raw pork (25). It has not been possible to demonstrate any phenotypic or genotypic differences between human and porcine isolates (7, 14, 23). The finding that porcine and human isolates harbor virulence plasmids with identical restriction endonuclease cleavage patterns provides additional evidence that the pig plays a role in the epidemiology of human Y. enterocolitica infection (19). Restriction enzyme analysis of chromosomal DNA has further supported this suggestion (9). In contrast to the frequent occurrence of the bacteria in live pigs and on freshly slaughtered carcasses, pathogenic * Corresponding author. yersiniae have only occasionally been recovered from pork products at the stage of retail sale, with the exception of fresh tongues (11, 23, 30). This phenomenon might be explained by the lack of proper selective methodology for the isolation of pathogenic strains. The development of isolation procedures which clearly differentiate pathogenic from nonpathogenic variants has proven to be problematical. Recently, however, Wauters et al. (28) described a new enrichment method with allows Y. enterocolitica 0: 3 to be recovered from a relatively high percentage of pork samples. Although a number of poly- and oligonucleotide probes have been described for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far as we know, none of these have been compared with conventional culture methods with regard to their ability to demonstrate bacteria in naturally infected foods. In a recent report (8), we described the development and testing of a synthetically produced oligonucleotide probe which proved to be an efficient tool for the detection and enumeration of virulent Y. enterocolitica in artificially contaminated foods. The purpose of the present investigation was therefore to compare a DNA-DNA hybridization assay, using this probe, and two conventional isolation procedures, including the new method described by Wauters et al. (28), with regard to their relative efficiency in detecting virulent Y. enterocolitica in naturally contaminated pork products. MATERIALS AND METHODS Food samples. A total of 50 samples of raw pork products were examined during the periods October through Novem- ber 1988 (26 samples) and May through June 1989 (24 389 on February 6, 2021 by guest http://aem.asm.org/ Downloaded from

DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

  • Upload
    others

  • View
    0

  • Download
    0

Embed Size (px)

Citation preview

Page 1: DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

Vol. 57, No. 2APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Feb. 1991, p. 389-3940099-2240/91/020389-06$02.00/0Copyright C 1991, American Society for Microbiology

Comparative Study of a DNA Hybridization Method and TwoIsolation Procedures for Detection of Yersinia enterocolitica

0:3 in Naturally Contaminated Pork ProductsTRULS NESBAKKEN,l 2* GEORG KAPPERUD,3 KARI DOMMARSNES,2

MIKAEL SKURNIK,4 AND ERIK HORNES5

Norwegian Meat Research Laboratory, P.O. Box 96, Refstad, 0513 Oslo 5,1* Department of Bacteriology,National Institute of Public Health, 0462 Oslo 4,3 Department of Food Hygiene, Norwegian College of

Veterinary Medicine, 0033 Oslo 1,2 and Apothekenes Laboratorier AIS, 0275 Oslo 2,5 Norway,and Department of Medical Microbiology, Turku University, SF-20520 Turku, Finland4

Received 17 September 1990/Accepted 3 December 1990

We compared a DNA-DNA hybridization assay, using a synthetically produced oligonucleotide probe, andtwo conventional isolation procedures (methods A and B) with regard to their relative efficiency in detectingYersinia enterocolitica 0:3 in naturally contaminated pork products. Method A was as described by Wauterset al. (Appl. Environ. Microbiol. 54:851-854, 1988). Method B has been recommended by the NordicCommittee on Food Analysis (method no. 117, 1987). The genetic probe was used in a colony hybridizationassay to detect virulent yersiniae at each of the isolation steps which composed methods A and B. A total of 50samples of raw pork products obtained from 13 meat-processing factories in Norway were examined. Y.enterocolitica serogroup 0:3, biovar 4, was isolated from altogether 9 (18.0%) of the samples by using the twoisolation procedures. In contrast, colony hybridization using the genetic probe indicated that 30 (60.0%) of thesamples contained virulent yersiniae. All samples which were positive on cultivation were also positive byhybridization. The results indicate that the occurrence of pathogenic Y. enterocolitica in Norwegian porkproducts is substantially higher than previously demonstrated and, therefore, reinforce our suggestion thatpork products represent an important potential source of human infection in Norway. The results also indicatethat the use of conventional isolation procedures may lead to considerable underestimation of pathogenic Y.enterocolitica in pork products.

There is strong indirect evidence that swine constitute animportant reservoir for human infection with Yersinia en-terocolitica (5, 7, 14, 23). Numerous surveys have shownthat swine may be healthy carriers of serogroups 0:3 and0:9, belonging to the same biovars and phagevars as thoseinvolved in human disease (14, 23). The pig is the only foodanimal which regularly harbors pathogenic Y. enterocolitica.In contrast, serogroup 0:8, the predominant human patho-gen in the United States, appears to be rare in swine. 0:8may have an entirely different reservoir(s) and ecology (23).In addition to their function as fecal commensals, serogroups0:3 and 0:9 also inhabit the oral cavities of swine, espe-cially the tongue and tonsils. The bacteria are also frequentlyencountered as surface contaminants on freshly slaughteredpig carcasses. In Belgium, which is the country with thehighest reported incidence of Y. enterocolitica infection, acase-control study has shown that the infection is stronglyassociated with the consumption of raw pork (25). It has notbeen possible to demonstrate any phenotypic or genotypicdifferences between human and porcine isolates (7, 14, 23).The finding that porcine and human isolates harbor virulenceplasmids with identical restriction endonuclease cleavagepatterns provides additional evidence that the pig plays arole in the epidemiology of human Y. enterocolitica infection(19). Restriction enzyme analysis of chromosomal DNA hasfurther supported this suggestion (9).

In contrast to the frequent occurrence of the bacteria inlive pigs and on freshly slaughtered carcasses, pathogenic

* Corresponding author.

yersiniae have only occasionally been recovered from porkproducts at the stage of retail sale, with the exception offresh tongues (11, 23, 30). This phenomenon might beexplained by the lack of proper selective methodology forthe isolation of pathogenic strains. The development ofisolation procedures which clearly differentiate pathogenicfrom nonpathogenic variants has proven to be problematical.Recently, however, Wauters et al. (28) described a newenrichment method with allows Y. enterocolitica 0: 3 to berecovered from a relatively high percentage of pork samples.Although a number of poly- and oligonucleotide probes

have been described for Y. enterocolitica (2, 4, 6, 8, 13, 21),as far as we know, none of these have been compared withconventional culture methods with regard to their ability todemonstrate bacteria in naturally infected foods. In a recentreport (8), we described the development and testing of asynthetically produced oligonucleotide probe which provedto be an efficient tool for the detection and enumeration ofvirulent Y. enterocolitica in artificially contaminated foods.The purpose of the present investigation was therefore tocompare a DNA-DNA hybridization assay, using this probe,and two conventional isolation procedures, including thenew method described by Wauters et al. (28), with regard totheir relative efficiency in detecting virulent Y. enterocoliticain naturally contaminated pork products.

MATERIALS AND METHODS

Food samples. A total of 50 samples of raw pork productswere examined during the periods October through Novem-ber 1988 (26 samples) and May through June 1989 (24

389

on February 6, 2021 by guest

http://aem.asm

.org/D

ownloaded from

Page 2: DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

390 NESBAKKEN ET AL.

samples). The samples originated from 13 meat-processingestablishments which were located in 12 of the 19 counties inNorway. The pork products examined comprised (i) freshpig tongues (5 samples), (ii) pork cuts (12 samples), and (iii)pork sausage meat (33 samples). The tongues were collectedimmediately after evisceration of the pigs, placed in sterilepolystyrene bags, and transported at ambient temperature tothe laboratory, where cultivation was initiated within 2 hafter collection. The remaining samples were placed insterile polystyrene bags and kept frozen at -20°C for up to 2weeks. Before cultivation, the samples were thawed at 4°Covernight.

All samples were examined for the presence of Y. entero-colitica serogroup 0:3, biovar 4, by two isolation proce-dures (methods A and B) and one DNA-DNA colony hybrid-ization method, as described below. Prior to examination, a90-cm2 area, comprising epithelium, mucosa, and up to a0.5-cm layer of muscle, was excised from the upper surfaceof each tongue. Each tongue was then cut into two along themidline, yielding two similar samples, each of 45 cm2. One ofthese was examined by method A, and the other wasexamined by method B.Method A. The isolation procedure known as method A

was as described by Wauters et al. (28). Each tongue sample(45 cm2) was homogenized with 100 ml of phosphate-buff-ered saline (PBS) (pH 7.6). Five-gram samples of pork cutsand pork sausage meat were homogenized with 20 ml of PBSin a Colworth 400 stomacher (A. J. Seward, London, Eng-land). From each homogenate, 2-ml portions were trans-ferred into tubes containing 100 ml of irgasan-ticarcillin-potassium chlorate (ITC) enrichment broth (28). Wauters(27) recommended the transfer of 2 ml of homogenateinstead of the 1-ml volume which is described in the originalprocedure (28). After incubation for 2 days at 24°C, 0.1 mlwas plated out onto modified Salmonella-Shigella-deoxy-cholate-calcium (SSDC) agar (28) (Yersinia agar; E. MerckAG, Darmstadt, Federal Republic of Germany). If no growthwas detected, the ITC enrichments were incubated furtherand plated after 3 days. All plates were incubated at 30°C andread after 24 h. From each enrichment, an additional 0.1 mlwas spread plated onto a SSDC plate covered with a nylonmembrane filter (NEF-978; Du Pont, NEN Research Prod-ucts, Boston, Mass.). These plates were incubated at roomtemperature (20 to 25°C) for 48 h.Method B. Isolation method B was as recommended by

the Nordic Committee on Food Analysis (20). Tongue sam-ples (45 cm2) and meat samples (25 g) were homogenized ina stomacher with 225 ml of PBS-sorbitol-bile (PSB) enrich-ment medium, which consisted of PBS (pH 7.6) with 1.0%sorbitol and 0.15% bile salts (no. 3; Oxoid Ltd., Basingstoke,Hampshire, England). The following procedure consisted ofthree isolation steps.

(i) Resuscitation. Samples homogenized in PSB were incu-bated at room temperature for 3 h, and 0.1-ml portions wereplated out onto cefsulodin-irgasan-novobiocin (CIN) agar(CM653 and SR109; Oxoid Ltd.).

(ii) Selective enrichment. The PSB cultures were incubatedat 4°C for 8 days, and 0.1 ml was then transferred to tubeswith 10 ml of a modified Rappaport broth (MRB) (no. 15209;E. Merck AG), containing 80.0 g of MgCl2 per liter. Carben-icillin was omitted from MRB, as recommended by Schie-mann (22). Selective enrichment in MRB proceeded for 4days at room temperature, after which 0.1 ml was platedonto CIN agar.

(iii) Cold enrichment. Three weeks of cold enrichment wasaccomplished by further incubation of the PSB cultures at

4°C for another 2 weeks, and two loopfuls (0.02 ml) werefinally plated onto CIN agar.At each isolation step, an additional 0.1 ml (0.02 ml at step

3) was spread plated onto a CIN agar plate covered with anylon membrane filter and was incubated at room tempera-ture for 48 h. Plates without membranes were incubated at28°C and read after 18 to 22 h.Colony hybridization. The genetic probe used in this study

consisted of a 19-mer oligonucleotide which was selected onthe basis of sequence analysis of the yadA gene (previouslydesignated yopA gene) located on the 40- to 50-MDa viru-lence plasmid of Yersinia spp. (8, 24). The development andtesting of the probe have been described in a previous report(8). The oligonucleotide was chemically synthesized byusing an automatic DNA synthesizer (8) and labeled at the 5'end with [32P]ATP (Amersham International plc, Bucking-hamshire, England) with bacteriophage T4 polynucleotidekinase (Amersham), as described by Maniatis et al. (12).Labeled probes were separated from unincorporated nucle-otides by running the samples through a Sephadex G-50 spincolumn (12).

Before hybridization, nylon membranes with bacterialcolonies were removed from the agar plates, the bacteriawere lysed, and their DNA was denatured and fixed to themembranes as described previously (8). Membranes werestored for up to 2 months before hybridization. Prehybrid-ization, hybridization, stringent washing, and autoradiogra-phy were also carried out as described previously (8).

Colony hybridization after direct plating. In order to inves-tigate the efficacy of colony hybridization after direct platingwithout prior enrichment or resuscitation steps, 24 of thesamples (5 g of each) were homogenized in 20 ml of PBS, and0.1 ml was spread plated on CIN and SSDC agar with nylonmembranes. Hybridization was carried out as specifiedabove.

Identification and typing of isolates. Suspect colonies onSSDC or CIN agar were subcultured on lactose bromothy-mol-blue agar for further morphological inspection. Culturesresembling Yersinia spp. were then subjected to a primarybiochemical screening using the three-tube method de-scribed by Lassen (10), followed by more extensive bio-chemical and cultural characterization as described else-where (18). Y. enterocolitica was identified according toestablished criteria (1). All isolates identified as Y. entero-colitica were biotyped by the methods and criteria of Wau-ters (29). Serological screening of the isolates was carriedout by slide agglutination against an absorbed rabbit antise-rum representing 0 antigen factor 3 (26). Only isolatesbelonging to Y. enterocolitica serogroup 0: 3, biovar 4, wereconsidered in this work.

Statistical analyses. Statistical analyses were performed byusing the Mantel-Haenszel corrected chi-square test bymeans of the data program package Epilnfo (Centers forDisease Control, Atlanta, Ga.).

RESULTS

Isolation. Y. enterocolitica serogroup 0: 3, biovar 4, wasisolated from altogether 9 (18.0%) of 50 pork products byusing the two conventional isolation procedures included inthe present investigation (Table 1). The highest number ofpositive samples were detected with method A, which dem-onstrated the pathogenic serogroup in 8 (16.0%) of thesamples, while 5 (10.0%) of the samples were positive by themore time-consuming method B (P > 0.05). Of the ninepositive samples, four were positive by both methods, four

APPL. ENVIRON. MICROBIOL.

on February 6, 2021 by guest

http://aem.asm

.org/D

ownloaded from

Page 3: DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

PROBE FOR Y. ENTEROCOLITICA 391

TABLE 1. Comparison of colony hybridization and two isolationprocedures for detection of Y. enterocolitica 0:3 in naturally

contaminated pork

No. of positive samples from pork productProcedure Tongues Cuts Sausage meat Total (%)

(n = 5) (n = 12) (n = 33) (n = 50)

Method A'Isolation 1 3 4 8 (16.0)Hybridization 2 4 13 19 (38.0)Both methods 2 4 13 19 (38.0)

Method B6Isolation 1 2 2 5 (10.0)Hybridization 2 5 17 24 (48.0)Both methods 2 5 17 24 (48.0)

Method A plusmethod B

Isolation 1 3 5 9 (18.0)Hybridization 2 5 23 30 (60.0)Both methods 2 5 23 30 (60.0)

Described by Wauters et al. (28).b Described by the Nordic Committee on Food Analysis (20).

were positive only by method A, and one sample was

positive only by method B.Colony hybridization. Colony hybridization using the syn-

thetic oligonucleotide probe indicated that 30 (60.0%) of the50 samples examined were contaminated with virulent yer-

siniae (Table 1). All samples which were positive on culti-vation were also positive by hybridization, while positiveresults obtained from 21 samples by hybridization could notbe confirmed by isolation of Y. enterocolitica from associ-ated culture media. Our ability to confirm hybridizationpositive results differed significantly depending on the num-ber of hybridization signals detected. For 10 of the 47membranes which were positive by hybridization, the num-

ber of signals were too numerous to count. With one

exception, all of the positive results (90.0%) could be con-firmed by isolation (Fig. 1). The single result that could notbe confirmed was for a membrane that was completelyovergrown by the background flora. The remaining 37 hy-bridization-positive membranes exhibited fewer than 15 sig-nals in the autoradiograms (mean, 3.0; median, 1; range, 1 to14). Only two (5.4%) of these could be confirmed by isolation(P < 0.0001; 9 of 10 versus 2 of 37). The results indicate thatcolony hybridization was essential for detection of virulentyersiniae from samples which produced only a few suchcolonies on the agar media.DNA hybridization based on method A detected virulent

yersiniae in 19 (38.0%) of the samples, while 24 (48.0%) were

positive when hybridization was carried out with membranesprepared from method B (Table 1), despite the fact thatmethod A isolated Y. enterocolitica from more samples thanmethod B (see above). For both methods, however, DNAhybridization resulted in a detection rate which was signifi-cantly higher than the isolation rate achieved (method A, 19of 50 versus 8 of 50, P = 0.01; method B, 24 of 50 versus 5of 50, P < 0.0001). Of altogether 30 samples which were

positive with hybridization, 6 were positive only by methodA, 11 were positive only by method B, and 13 were positiveby both methods. The hybridization signal count was on

average lower on membranes prepared from method B, with26 (92.9%) of the 28 positive membranes showing fewer than

15 signals, compared with method A, by which 11(57.9%) of19 positive membranes showed fewer than 15 signals (P =0.004).A comparison of DNA hybridization and isolation meth-

ods for the three different steps composing method B ispresented in Table 2. It is especially noteworthy that Y.enterocolitica 0:3 was not isolated from any of the samplesafter 3 weeks of cold enrichment (step 3), while DNAhybridization gave positive results for seven samples afterthis enrichment procedure. This discrepancy may be ex-plained by (i) the generally high number of background floraon membranes prepared after step 3 and by (ii) the lownumber of yersiniae present, as evidenced by the lownumber of hybridization signals on the membranes con-cerned (mean, 2.4; median, 1; range, 1 to 8). None of theseseven samples were positive with colony hybridization aftersteps 1 and 2, and only one was positive after cultivation(step 2).Colony hybridization after direct plating. Positive hybrid-

ization signals were obtained from altogether 11 (45.8%) of24 samples which were examined after direct plating withoutprior resuscitation or enrichment. Nevertheless, when thesame samples were examined by hybridization after enrich-ment in methods A and B, 11 more positive samples weredetected, all of which were negative after direct plating.Only a single sample was positive after direct plating butnegative after the two other methods.

Enumeration. The results achieved with colony hybridiza-tion after direct plating allowed the number of virulentYersinia bacteria per gram in the original food product to beestimated by multiplying the number of hybridization signalsby 50 (the dilution factor). In this way, it was estimated thatthe count of virulent yersiniae in eight samples of porksausage meat varied from 50 to 2,500/g (average, 439 CFU/g). In three samples of pork cuts, the counts were found torange between 50 and 300/g (average, 200 CFU/g).

DISCUSSION

Of the two conventional isolation procedures compared inthis study, the highest number of positive samples wasdetected with method A. Wauters et al. (28) compared thismethod with a number of one- or two-step enrichmentprocedures and, in agreement with our results, foundmethod A to be by far the most sensitive for recovery of Y.enterocolitica 0:3; especially from ground pork and mas-seter muscle samples. Even though we could not demon-strate any statistically significant difference between meth-ods A and B as regards isolation rate, there are,nevertheless, several reasons for preferring method A. First,while all samples which were positive with method B werealso positive with method A, with only one exception,method A detected four positive samples which were nega-tive with method B. Furthermore, method B is much moretime-consuming than method A, a factor of considerablepractical significance.

It is well known that the different serogroups within Y.enterocolitica vary in their tolerance to selective compo-nents and other factors during the isolation process (23). Asthese serogroups have different geographic distributions, amethod which functions well in one part of the world maynot necessarily be optimal for use in other countries. Boththe agar medium (SSDC) and the enrichment medium (ITC)included in method A are specifically designed for isolationof the pathogenic serogroup 0:3, which is by far the mostimportant causal agent of human Y. enterocolitica infection

VO0L. 57, 1991

on February 6, 2021 by guest

http://aem.asm

.org/D

ownloaded from

Page 4: DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

392 NESBAKKEN ET AL.

C

F

FIG. 1. Autoradiograms of colony hybridization membranes inoculated with one sample of naturally contaminated pork product. Themembranes were prepared after different isolation steps: A, direct plating on SSDC agar; B, direct plating on CIN agar; C, enrichment in ITCbroth (2 days at 240C) followed by plating on SSDC agar (method A); D, resuscitation in PSB medium (3 h at room temperature) (method B,step 1); E, preenrichment in PSB (8 days at 40C) followed by selective enrichment in MRB (4 days at room temperature) and plating on CINagar (method B, step 2); F, cold enrichment in PSB (3 weeks at 40C) followed by plating on CIN agar (method B, step 3). Results C and Ewere confirmed by isolation from the corresponding culture media. Results D and F were negative by isolation. Isolation was not attemptedfrom culture media corresponding to A and B.

APPL. ENVIRON. MICROBIOL.

on February 6, 2021 by guest

http://aem.asm

.org/D

ownloaded from

Page 5: DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

PROBE FOR Y. ENTEROCOLITICA 393

TABLE 2. Comparison of colony hybridization and the threedifferent isolation steps of method B"

No. of positive samples after isolation step:Procedure

2c 3 All steps

Isolation 1 4 0 5Hybridization 9 12 7 24Both methods 10 13 7 24

a Described by the Nordic Committee on Food Analysis (20).b Resuscitation (3 h at room temperature in PSB).c Preenrichment in PSB (8 days at 4'C) followed by selective enrichment in

MRB (4 days at room temperature).d Cold enrichment in PSB (3 weeks at 4'C).

in Europe. Both ITC and SSDC will to some extent hinderthe growth of the serogroups 0:8 and 0: 5,27, which domi-nate in the United States, and these media will therefore tendto underestimate such variants, although they are excellentfor the recovery of 0: 3 and probably also 0:9 (28). MethodB, on the other hand, includes media which permit theisolation of all pathogenic serogroups, including 0:8 and0: 5,27. Neither method B nor other multivalent methods sofar described, however, allow optimal recovery of all therelevant serogroups (23, 28).The genetic probe employed in our study is based on a

plasmid-encoded virulence determinant which occurs in allpathogenic Y. enterocolitica serogroups (8). We have previ-ously demonstrated that this probe is able to identify anumber of pathogenic serogroups equally effectively (8). Theprobe detected virulent Y. enterocolitica in artificially con-taminated food samples. However, negative hybridizationresults were obtained for uninoculated pork products with alarge background of indigenous bacteria, indicating that theprobe does not share DNA sequence homology with bacterianormally present in this kind of food. Furthermore, theprobe was able to differentiate pathogenic variants from abroad spectrum of nonpathogenic yersiniae. This is animportant characteristic, as such environmental yersiniaeare frequently encountered in many foods, including porkproducts (4, 7, 11, 23, 30). It has been claimed that suchbacteria may conceal the presence of pathogenic variantsbecause of considerable morphological similarity, with un-derestimation of the latter as a likely consequence (11, 23,30). Our results support the assumption that the use ofconventional cultivation methods may lead to considerableunderestimation of pathogenic Y. enterocolitica in porkproducts. By combining colony hybridization with the twoisolation procedures, we achieved a significantly higherdetection rate than was achieved by using the isolationmethods alone. Although we cannot completely rule out thepossibility of false-positive hybridization signals, the datareferred to above suggest that the probe is highly specific.Furthermore, with one exception, all hybridization-positivemembranes that could not be confirmed by isolation showedonly a few signals in the autoradiograms (mean, 2.8; median,1; range, 1 to 14). It is conceivable that such a low number ofYersinia colonies may be difficult to detect by conventionalisolation methods.The difference between isolation and hybridization was

greatest for method B, by which hybridization led to a 380%increase in detection rate, the corresponding increase formethod A being 138%. Colony hybridization based onmethod B was the procedure which achieved the highestdetection rate, despite the fact that method B was inferior asan isolation method per se. Furthermore, colony hybridiza-

tion indicated that the number of colonies (observed as darkspots on the autoradiograms) was, on average, higher on theSSDC plates from method A than on the CIN plates frommethod B. Our results therefore suggest that method Ballowed growth of Y. enterocolitica from more samples thanmethod A, though the number of colonies on each plate wasrelatively low. Method A, on the other hand, seems to allowbetter multiplication of 0: 3, such that the bacteria are easierto isolate.Colony hybridization based on method B gave a positive

result for a number of samples which were negative withmethod A, though the converse was true in some cases.Optimal detection was achieved when the two methods werecombined, a procedure which is, however, much too costlyand time-consuming for most laboratories. Which of the twoenrichment procedures one chooses to combine with hybrid-ization will depend on (i) the serogroups which one expectsto find, (ii) the requirements which one sets for sensitivity,(iii) the importance of obtaining a rapid result, and (iv) theeconomic resources available. Though, ideally, it would bedesirable to be able to detect the bacteria without priorenrichment, this procedure gave a negative result in 50% ofthe samples which proved positive after enrichment.The DNA probe employed cannot differentiate between

pathogenic Y. enterocolitica, Y. pseudotuberculosis, or Y.pestis, as it is based on a DNA sequence which is conservedin all these species (8, 24). This scarcely represents aproblem in the context of the present investigation, as wehave never been able to demonstrate virulent Y. pseudotu-berculosis (or Y. pestis) in Norwegian pork products or onpig carcasses (15-18). Y. enterocolitica 0:3 is the onlyvirulent Yersinia variant which we have isolated from thesesources. Although single isolates of both Y. pseudotubercu-losis 0:1 and Y. enterocolitica 0:5,27 have been obtained,both these isolates lacked the virulence plasmid (18). It istherefore highly probable that the positive samples detectedby DNA hybridization in this study actually contained 0 :3and not the other pathogenic serogroups, even though thispossibility cannot be entirely excluded.

In previous investigations, we showed that Y. enteroco-litica 0:3 occurred in large numbers in the oral cavity in ahigh proportion of the slaughter pigs which were examined(15, 16, 18). The bacterium was also a common surfacecontaminant on fresh carcasses (16). In contrast, Y. entero-colitica 0:3 was only isolated from one of 127 raw porkproducts at the stage of retail sale (17). The results of thepresent investigation indicate that the occurrence of patho-genic Y. enterocolitica is substantially higher than previ-ously demonstrated and, therefore, reinforce our hypothesisthat pork products represent an important potential sourceof human infection in Norway. Even though the estimatedbacterial counts per gram were not notably high, the pres-ence of pathogenic Y. enterocolitica must always be consid-ered to represent a potential health hazard, as the bacteriumis able to survive and multiply in properly refrigerated foods(3).

Further studies are necessary to ascertain more preciselythe occurrence of Y. enterocolitica 0:3 in various types ofproducts and to trace contamination at the various stages inthe food production chain. DNA hybridization should proveto be a useful tool in this connection.

ACKNOWLEDGMENTS

Financial support was provided by the Norwegian Council forAgricultural Research and by the Sigrid Juselius Foundation.

VOL. 57, 1991

on February 6, 2021 by guest

http://aem.asm

.org/D

ownloaded from

Page 6: DNA Hybridization Method and Two Isolation Procedures for ...Although a number of poly-and oligonucleotide probes havebeendescribed for Y. enterocolitica (2, 4, 6, 8, 13, 21), as far

394 NESBAKKEN ET AL.

REFERENCES1. Bercovier, H., D. J. Brenner, J. Ursing, A. G. Steigerwalt, G. R.

Fanning, J. M. Alonso, G. P. Carter, and H. H. Mollaret. 1980.Characterization of Yersinia enterocolitica sensu stricto. Curr.Microbiol. 4:201-206.

2. Gemski, P., M. A. Sodd, R. J. Neill, M. C. Seguin, and J. E.Williams. 1987. Cloning and use of Vwa plasmid DNA as geneprobes for virulent yersiniae. Contrib. Microbiol. Immunol.9:296-303.

3. Hanna, M. O., J. C. Stewart, D. L. Zink, Z. L. Carpenter, andC. Vanderzant. 1977. Development of Yersinia enterocolitica onraw and cooked beef and pork at different temperatures. J. FoodSci. 42:1180-1184.

4. Hill, W. E., W. L. Payne, and C. C. G. Aulisio. 1983. Detectionand enumeration of virulent Yersinia enterocolitica in food byDNA colony hybridization. AppI. Environ. Microbiol. 46:636-641.

5. Hurvell, B. 1981. Zoonotic Yersinia enterocolitica infection:host range, clinical manifestations, and transmission betweenanimals and man, p. 145-159. In E. J. Bottone (ed.), Yersiniaenterocolitica. CRC Press, Inc., Boca Raton, Fla.

6. Jagow, J., and W. E. Hill. 1986. Enumeration by DNA colonyhybridization of virulent Yersinia enterocolitica colonies inartificially contaminated food. Appl. Environ. Microbiol. 51:441-443.

7. Kapperud, G., and T. Bergan. 1984. Biochemical and serologi-cal characterization of Yersinia enterocolitica, p. 295-344. In T.Bergan and J. R. Norris (ed.), Methods in microbiology, vol. 15.Academic Press, Inc. (London), Ltd., London.

8. Kapperud, G., K. Dommarsnes, M. Skurnik, and E. Hornes.1990. A synthetic oligonucleotide probe and a cloned polynu-cleotide probe based on the yopA gene for detection andenumeration of virulent Yersinia enterocolitica. Appl. Environ.Microbiol. 56:17-23.

9. Kapperud, G., T. Nesbakken, S. Aleksic, and H. H. Mollaret.1990. Comparison of restriction endonuclease analysis andphenotypic typing methods for differentiation of Yersinia en-

terocolitica isolates. J. Clin. Microbiol. 28:1125-1131.10. Lassen, J. 1975. Rapid identification of Gram-negative rods

using a three-tube method combined with a dichotomic key.Acta Path. Microbiol. Scand. Sect. B 83:525-533.

11. Lee, W. H., C. Vanderzant, and N. Stern. 1981. The occurrenceof Yersinia enterocolitica in foods, p. 161-172. In E. J. Bottone(ed.), Yersinia enterocolitica. CRC Press, Inc., Boca Raton,Fla.

12. Maniatis, T., E. F. Fritsch, and J. Sambrook. 1982. Molecularcloning: a laboratory manual. Cold Spring Harbor Laboratory,Cold Spring Harbor, N.Y.

13. Miliotis, M. D., J. E. Galen, J. B. Kaper, and J. G. Morris, Jr.1989. Development and testing of a synthetic oligonucleotideprobe for the detection of pathogenic Yersinia strains. J. Clin.Microbiol. 27:1667-1670.

14. Mollaret, H. H., H. Bercovier, and J. M. Alonso. 1979. Summaryof the data received at the WHO Reference Center for Yersiniaenterocolitica. Contrib. Microbiol. Immunol. 5:174-184.

15. Nesbakken, T. 1985. Comparison of sampling and isolation

procedures for recovery of Yersinia enterocolitica serotype 0:3from the oral cavity of slaughter pigs. Acta Vet. Scand. 26:127-135.

16. Nesbakken, T. 1988. Enumeration of Yersinia enterocolitica 0:3from the porcine oral cavity, and its occurrence on cut surfacesof pig carcasses and the environment in a slaughterhouse. Int. J.Food Microbiol. 6:287-293.

17. Nesbakken, T., B. Gondrosen, and G. Kapperud. 1985. Investi-gation of Yersinia enterocolitica, Yersinia enterocolitica-likebacteria, and thermotolerant campylobacters in Norwegianpork products. Int. J. Food Microbiol. 1:311-320.

18. Nesbakken, T., and G. Kapperud. 1985. Yersinia enterocoliticaand Yersinia enterocolitica-like bacteria in Norwegian slaughterpigs. Int. J. Food Microbiol. 1:301-309.

19. Nesbakken, T., G. Kapperud, H. S0rum, and K. Dommarsnes.1987. Structural variability of 40-50 Mdal virulence plasmidsfrom Yersinia enterocolitica. Geographical and ecological dis-tribution of plasmid variants. Acta Path. Microbiol. Immunol.Scand. Sect. B 95:167-173.

20. Nordic Committee on Food Analysis. 1987. Yersinia enteroco-litica. Detection in food. Method no. 117, 2nd ed. NordicCommittee on Food Analysis, Esbo, Finland.

21. Robins-Browne, R. M., M. D. Miliotis, S. Cianciosi, V. L. Miller,S. Falkow, and J. G. Morris, Jr. 1989. Evaluation of DNAcolony hybridization and other techniques for detection ofvirulence in Yersinia species. J. Clin. Microbiol. 27:644-650.

22. Schiemann, D. A. 1982. Development of a two-step enrichmentprocedure for recovery of Yersinia enterocolitica from food.Appl. Environ. Microbiol. 43:14-27.

23. Schiemann, D. A. 1989. Yersinia enterocolitica and Yersiniapseudotuberculosis, p. 601-672. In M. P. Doyle (ed.), Food-borne bacterial pathogens. Marcel Dekker, Inc., New York.

24. Skurnik, M., and H. Wolf-Watz. 1989. Analysis of the yopAgene encoding the Yopl virulence determinants of Yersinia spp.Mol. Microbiol. 3:517-529.

25. Tauxe, R. V., J. Vandepitte, G. Wauters, S. M. Martin, V.Goossens, P. De Mol, R. Van Noyen, and G. Thiers. 1987.Yersinia enterocolitica infections and pork: the missing link.Lancet i:1129-1132.

26. Wauters, G. 1981. Antigens of Yersinia enterocolitica, p. 41-54.In E. J. Bottone (ed.), Yersinia enterocolitica. CRC Press, Inc.,Boca Raton, Fla.

27. Wauters, G. Personal communication.28. Wauters, G., V. Goossens, M. Janssens, and J. Vandepitte. 1988.

New enrichment method for isolation of pathogenic Yersiniaenterocolitica serogroup 0:3 from pork. Appl. Environ. Micro-biol. 54:851-854.

29. Wauters, G., K. Kandolo, and M. Janssens. 1987. Revisedbiogrouping scheme of Yersinia enterocolitica. Contrib. Micro-biol. Immunol. 9:14-21.

30. World Health Organization. 1987. Report of the Round TableConference on Veterinary Public Health Aspects of Yersiniaenterocolitica, Orvieto, 1985. WHO Collaborative Centre forResearch and Training in Veterinary Public Health, IstitutoSuperiore di Sanitd, Rome.

APPL. ENVIRON. MICROBIOL.

on February 6, 2021 by guest

http://aem.asm

.org/D

ownloaded from