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1 COURSE STRUCTURE M. Sc. Chemistry Session 2019-2021 Department of Chemistry Babasaheb Bhimrao Ambedkar University (A Central University) Lucknow- 226 025

COURSE STRUCTURE M. Sc. Chemistry

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Page 1: COURSE STRUCTURE M. Sc. Chemistry

1

COURSE STRUCTURE

M. Sc. Chemistry

Session 2019-2021

Department of Chemistry

Babasaheb Bhimrao Ambedkar University

(A Central University)

Lucknow- 226 025

Page 2: COURSE STRUCTURE M. Sc. Chemistry

2

Annexure-II

Department of Chemistry

SEMESTER I

Subject

Code

Subject name Credit Marks

MCH-

CBCS-101

Elective-I

MCH-CBCS-101 (01): Chemistry in Life-I

MCH-CBCS-101 (02): Applied Chemistry-I

4 70 (End semester exam)

+30 (Internal exam)

MCH-102 Organic Chemistry-I 4 70 (End semester exam)

+30 (Internal exam)

MCH-103 Physical Chemistry-I 4 70 (End semester exam)

+30 (Internal exam)

MCH -104 Inorganic Chemistry-I 4 70 (End semester exam)

+30 (Internal exam)

MCH-105 Lab Course-I

8 70 (End semester exam)

+30 (Internal exam)

SEMESTER II

MCH-

CBCS-201

Elective-I

MCH-CBCS-201 (01): Chemistry in Life-II

MCH-CBCS-201 (02): Applied Chemistry-II

4 70 (End semester exam)

+30 (Internal exam)

MCH-202 Organic Chemistry-II 4 70 (End semester exam)

+30 (Internal exam)

MCH-203 Physical Chemistry-II 4 70 (End semester exam)

+30 (Internal exam)

MCH-204 Inorganic Chemistry-II 4 70 (End semester exam)

+30 (Internal exam)

MCH-205 Lab Course-II

8 70 (End semester exam)

+30 (Internal exam)

SEMESTER III

MCH-301 Supramolecular, Bioinorganic and Bioorganic

Chemistry

4 70 (End semester exam)

+30 (Internal exam)

MCH-302 Organic Chemistry-III 4 70 (End semester exam)

+30 (Internal exam)

MCH-303 Physical Chemistry-III 4 70 (End semester exam)

+30 (Internal exam)

MCH-304 Analytical Chemistry 4 70 (End semester exam)

+30 (Internal exam)

Page 3: COURSE STRUCTURE M. Sc. Chemistry

3

MCH-305 Lab Course-III

8 70 (End semester exam)

+30 (Internal exam)

SEMESTER IV

MCH-401 Compulsory Paper

Spectroscopic Techniques in Chemistry

4 70 (End semester exam)

+30 (Internal exam)

MCH-402 Elective-I

CH-401 (01): Medicinal Chemistry

CH-401(02): Polymer Chemistry

CH-401(03): Environmental Chemistry

4 70 (End semester exam)

+30 (Internal exam)

MCH-403 Elective-II

CH-402(01): Electrochemistry

CH-402 (02): Computers in Chemistry

CH-402(03): Material Chemistry

4 70 (End semester exam)

+30 (Internal exam)

MCH-404 Project 8 100 (Final)

MCH-405 Seminar 4 100 (Final)

(Dr. Jawahar Lal) (Dr. Shailesh Kumar)

(Invitee) (Invitee)

(Dr. Jyoti Pandey) (Dr. Anjani Tiwari)

(Invitee) (Invitee)

(Dr. Preeti Gupta) (Prof. Gajanan Pandey)

(Member) (Member)

(Prof. Kuldip Singh Dhindsa) (Prof. Kaman Singh)

(External Member) (Chairman)

Page 4: COURSE STRUCTURE M. Sc. Chemistry

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ANNEXURE II

SYLLABUS

SEMESTER I

MCH-CBCS-101 (01): CHEMISTRY IN LIFE-I 60hrs

Unit-I

Pharmaceutical and Drug Regulations

Regulatory aspects of pharmaceutical and bulk drug manufacture: DRA, FDA, CDSCO, IPR-

Patent, Patent approval process, Industrial Design, Trade mark, copyright, regularity aspects of

pharmaceutical & drug manufactures. Good manufacturing practices (GMP). Diagnostic and

therapeutic Radio pharmacy

Unit II

Drugs and Medicines- Similarity and differences, mode of Drug action, types of medicines;

Role of medicinal chemists- Journey of molecules from lab to market; Lipinski's Rule;

Current trends in Drug discovery-Drug Discovery Pipeline, Chiral Drugs: Importance & their

stereo electronic properties of drug molecus, Classification of drugs: on basis of

pharmacological activity, chemical structure, and origin, Methods of administration of drugs.

Modern Drugs for CNS, Clinical trials- Testing of new compound on human.

Unit-III

Green Chemistry

Introduction: Principles and Concepts of Green Chemistry, Prospects and future of Green

Chemistry, Twelve guiding principles of green chemistry, Green solvents, Green catalysis, Non-

conventional energy sources.

Unit IV

Polymer Chemistry

Basic concept: Classification of polymers (with suitable examples) based on origin, structure,

backbone, branching. Types of polymerization, Important thermoplastic and thermosetting

resins, Biomedical applications of polymers, Polymer supported reagents.

Recommended Books:

1. Drug Regulatory Affairs by V.Sai Kishore (Ikon Books)

2. Fundamentals in medicinal chemistry- G. Thomas. 2nd edition

3. Introduction to medical Chemistry, G. L. Patrick

4. Medicinal Chemistry- Ashutoshkar

5. Medicinal Chemistry- Sreeram and Yogeshwari

6. Medicinal Chemistry & Drug discovery- Burger (Volume 1-6)

7. Strategies for organic synthesis and Design -D. Lednicer

8. Burger’s Medicinal Chemistry vol. 1to6

Page 5: COURSE STRUCTURE M. Sc. Chemistry

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9. Green Chemistry: Theory and Practice. P.T. Anastas and J.C. Warner. Oxford University

Press.

10. Green Chemistry: Introductory Text. M. Lancaster Royal Society of Chemistry (London).

11. Introduction to Green Chemistry. M.A. Ryan and M.Tinnesand, American Chemical Society

(Washington).

12. Alternative Solvents for Green Chemistry. F.M. Kerton. Royal Society of Chemistry

(London).

13. Textbook of polymer science, F.W. Billmayer Jr. Wiley

14. Polymer Science, V.R. Gowarikar, N.V. Vishwanathan and J. Shreedhar, Wiley-Eastern

15. Introduction to Polymer Chemistry by Carraher Jr.

MCH-CBCS-101 (02): APPLIED CHEMISTRY-I 60hrs

Unit- 1

Surface active agents, Micelles, Advance Surface Chemistry

Surface active agent, classification of surface active agent, micellization, hydrophobic

interaction, critical micellar concentration (CMC), factors affecting the CMC of surfactant,

counter ion binding to micelles, thermodynamics of micellization – phase separation and moss

action models, solubilization, micro emulation, reverse micelles.

Gibbs adsorption isotherm, estimation of surface areas (BET equation), Surface film of liquids

electro- kinetic phenomenon), catalytic activity at surface. Chemical reactions on surfaces and

their mechanisms, various adsorption isotherms, Viz Freundlich, Langmuir, BET, Tempkin,

Radleich - Peterson, Dubini - Astakhov equation, Giles classification of adsorption isotherms.

Shapes. Activated carbon properties, adsorption capacity, iodine number, molasses number,

product density, mesh size, ash content, IUPAC classification of macro, meso and micro-porous

materials (pore size distribution), and industrial applications of adsorption.

Unit-2

Standard Protocols for Validation of Methods

Protocol for the design, conduct & interpretation of collaborative studies- 2005(IUPAC) AOAC

official 2002 methods of analysis, Appendix D: Guidelines for collaborative study procedure to

validate Characteristics of a method of analysis, ISO 5725 document.

Unit-3

Environmental Chemistry

The Atmosphere: Composition and structure of the atmosphere: troposphere, stratosphere,

mesosphere and thermosphere. Ozone layer and its role. Major air pollutants : CO, SO2, NO and

particulate matters –their origins and harmful effects, problems of ozone layer depletion, green

house effect, acid rain and photochemical smog, La Nino & El Nino. Air pollution episodes. Air

quality standard. Air pollution control measures: cyclone collector, electrostatic precipitator,

catalytic converter.

Page 6: COURSE STRUCTURE M. Sc. Chemistry

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The Hydrosphere: Environmental role of water, Water pollution control measures: waste water

treatment: chemical treatment and microbial treatment; water quality standards: DO. BOD, COD,

TDS and hardness parameters. Desalination of sea water: reverse osmosis, electro dialysis.

The Lithosphere: Water and air in soil, waste matters and pollutants in soil, waste classification,

treatment and disposal. Soil pollution and control measures.

Unit-4

Nanomaterial and Applied Green Chemistry

Nanomaterial, Role of size in nanomaterial, Semiconductor/Nanostructures/ nanowires/Nano

clusters/Carbon nanotubes: Synthesis & Application, Characterization techniques, Properties of

nanomaterial: optical, electronic, magnetic.

Need for Green Chemistry. Goals of Green Chemistry. Limitations/ Obstacles in the pursuit of

the goals of Green Chemistry, Strengthening/ development of analytical techniques to prevent

and minimize the generation of hazardous substances in chemical processes. Examples of Green

Synthesis/ Reactions and some real world cases, Green chemistry in sustainable development.

Recommended Books:

1. Physical Chemistry–P. W. Atkins, Oxford University press, VIIth edition, 2002

2. Physical Chemistry-K. L. Kapoor (Part-V)

3. Physical Chemistry- G. K. Vemulapalli, Prentice- Hall of India.

4. Environmental chemistry by A.K. De

5. Green Chemistry: Theory and Practice. P.T. Anastas and J.C. Warner. Oxford University

Press.

6. Green Chemistry: Introductory Text. M. Lancaster Royal Society of Chemistry (London).

7. Introduction to Green Chemistry. M.A. Ryan and M.Tinnesand, American Chemical Society

(Washington).

8. Alternative Solvents for Green Chemistry. F.M. Kerton. Royal Society of Chemistry

(London).

MCH-102: ORGANIC CHEMISTRY-I 60hrs

Unit-I

Nature of Bonding in Organic Molecules

Delocalized chemical bonding-conjugation, cross conjugation, resonance, hyperconjugation,

tautomerism. Reactive Intermediates-Generation, structure, stability and reactivity of

carbocations, carbanions, free radicals, carbenes,nitrenes and benzynes. Advanced treatment in

terms of detection techniques of reactive intermediates.

Aromaticity in benzenoid and non-benzenoid compounds, alternant and non-alternant

hydrocarbons, Huckel’s rule, energy of pi-molecular orbitals, annulenes, antiaromaticity,

homoaromaticity.

Unit-II

Stereochemistry

Concept of Chirality and molecular dissymmetry, R and S nomenclature, Geometrical isomerism

E and Z Nomenclature, Fischer projections, Sawhorse projections and Zig-zag notation and

interconversion, chirality without chiral centres: allenes, atropisomerism, prostereoisomerism,

prochiral relationship, homotopic, enantiotopic and diastereotopic atoms, groups and faces.

Stereospecific and stereoselective synthesis, asymmetric synthesis, enantioselective reaction

(Meerwein-Ponndorf-Verley reaction, Sharpless Epoxidation), Cram’s rule and Prelog’s rule,

Page 7: COURSE STRUCTURE M. Sc. Chemistry

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Racemic modifications and their resolution, enantiomeric excess (ee), Conformational analysis

of cyclohexanes and decalins, effect of conformation on reactivity, conformation of sugars.

Introduction to Circular Dichroism (CD) and Optical Rotatory Dispersion (ORD)

Unit-III

Reaction Mechanism: Structure and Reactivity

Energy consideration for reactivity, kinetics of reaction, kinetic and thermodynamic control,

Hammond’s postulate, intermediate vs transition state, Hammett equation, Curtin-Hammett

principle, Taft equation.

Methods of determination of reaction mechanism: a) product analysis; b) determination of

presence of intermediates; c) cross over experiment; d) isotopic labeling; e) stereochemical

evidence; f) kinetic evidence.

Unit-IV

(a) Aliphatic Nucleophilic Substitution

The SN2 , SN1 and mixed SN1 and SN2, SET mechanisms.

The neighboring group mechanism, Classical and nonclassical carbocations, common

carbocation rearrangements,The SNi mechanism. Nucleophilic substitution at an allylic, aliphatic

trigonal and vinylic carbon.

(b) Aromatic Nucleophilic Substitution

The SNAr, SN1, benzyne and SRN1 mechanisms.Reactivity-effect of substrate structure, leaving

group and attacking nucleophile. The von Richter, Sommelet-Hauser and Smiles rearrangements.

Recommended Books:

1. Stereochemistry by P. S. Kalsi (New Age International)

2. Stereochemistry of Carbon Compounds. (McGraw-Hill) E. L. Eliel

3. Organic Stereochemistry (McGraw-Hill) by Hallas.

4. Introduction to Stereochemistry (Benjumin)- K. Mislow

5. Stereochemistry of Organic Compounds- D. Nasipuri.

6. A Guide Book to Mechanism in Organic Chemistry (Orient-Longmens)-Peter Sykes

7. Reaction Mechanism in Organic Chemistry- S. M. Mukherji and S. P. Singh, revised by

S.P. Singh and Om Prakash, 2016 Edition.

8. Advanced Organic Chemistry-Reactions, Mechanism and Structure-J. March, (McGraw-

Hill).

9. Advanced Organic Chemistry, F.A. Carey and R., J. Sundber, Plenum.

10. Structure and Mechanism in Organic Chemistry-P.S. Kalsi

11. Organic Chemistry Vol. I. by I.L. Finar

12. Problems and Solutions by I.L. Finar

13. Modern Methods of Organic Synthesis by W Carruthers and I. Coldham

14. Organic Chemistry- R. T. Morrison and R. N. Boyd, (Prentice Hall)

15. Modern Organic Reactions (Benjamin) H. O. House.

16. Principle of Organic Synthesis-R. O. C. Norman and J. M. Coxon. (ELBS)

17. Basic Principles of Organic Chemistry (Benjamin) J. D. Roberts and M. C. Caserio.

18. Organic Chemistry (McGraw-Hill) Hendrikson, Cramand Hammond.

19. Modern Organic Synthesis: An Introduction, George S. Zweifel, Michael H. Nantz

Page 8: COURSE STRUCTURE M. Sc. Chemistry

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MCH -103: PHYSICAL CHEMISTRY-I 60hrs

Unit I

Chemical Dynamics

Theory for rate of reaction: collision, activated complex and unimolecular reaction i.e.

Lindemann, Thermodynamics of reaction rate. Reaction kinetics in solution, Salt effects: Primary

and secondary.

The fast reaction kinetics, Relaxation, NMR and flash photolysis methods. Oscillatory chemical

reaction, Belosov- Zhabotinsky reaction.

Photochemical reaction: Chain reaction involving H/Cl, H/Br reaction. Enzyme kinetics.

Unit II

Surface Chemistry

A. Adsorption

Laplace equation, Kelvin equation for vapor pressure of droplets, Gibbs adsorption isotherm,

Langmuir Adsorption Isotherm, Estimation of surface area by BET equation, surface film of

liquids (electro kinetic phenomenon),catalytic activity at surface.

B. Surface Active Agents and Micelles

Surface active agents, Classification of surface active agent, micellization, hydrophobic

interaction, critical micellar concentration (CMC), factors affecting the CMC of surfactant,

counter ion binding to micelles, thermodynamics of micellization – phase separation and mass

action models, solubilization, micro emulation, reverse micelles.

Unit III

Electrochemistry

Activity, activity coefficient, Debye-Huckel theory for electrolytic solution, determination of

activity and activity coefficient, ionic strength.

Electrochemistry of solution, Debye-Huckel – Onsager (DHO) treatment and its extension, ion

solvent interaction, Debye Huckel, B Jerum mode.

Thermodynamics of electrified interface equation, deviation of electrocapillarity,Lippmann

equation (surface excess), methods of determination, structure of electrified interfaces. Guoy

Chapman, Stern, Bockris, Devanathan method.

Page 9: COURSE STRUCTURE M. Sc. Chemistry

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Unit IV

X-Ray and Electron Diffraction

Miller indices, Laue method, Bragg condition, Debye-Scherrer method of X-ray structural

analysis of crystals, index reflection. Structure of simple lattices and X-ray intensities, structure

factor and its relation to intensity and electron density, phase problem. Description of the

procedure for an X-ray structure analysis, absolute configuration of molecules, Ramchandran

plot.

Scattering intensity vs. scattering angle, Wierl equation, measurement technique, elucidation of

structure of simple gas phase molecule. Low energy electron diffraction and structure of

surfaces.

Recommended Books:

9. Thermodynamics for Chemists – S. Glasstone, D. Van Nostrand.

10. Principles of Electrochemistry-S. Glasstones

11. Modern Electrochemistry by K.N. Reddy

12. Thermodynamics A Core Course- R. C. Srivastava, S. K. Saha and A. K. Jain, Prentice-

Hall of India, IInd edition, 2004.

13. Chemical Kinetics- K. J. Laidler, Pearson Education, 2004

14. Physical Chemistry–P. W. Atkins, Oxford University press, VIIth edition, 2002

15. Physical Chemistry-K. L. Kapoor (Part-V)

16. Physical Chemistry- G. K. Vemulapalli, Prentice- Hall of India.

17. Basic Chemical Kinetics- G. L. Agarwal, Tata- Mc Graw Hill

18. Principles of Physical Chemistry–Marron and Pruton

19. Physical Chemistry– G. M. Barrow, Tata-McGraw Hill, Vth edition, 2003.

20. Chemical Kinetics by Keith Laidler, Harper and Row, 1995.

21. Chemical Kinetics: The Study of Reaction Rates in Solution by Kenneth A.Connors, VCH,

1990

22. Electrochemistry by Carl H. Hamann, Andrew Hamnett and Wolf Vielstich,

Wiley VCH, 1998.

23. Solid State Chemistry, A. R. West, paperback edition, Wiley (2007)

24. Solid State Chemistry, L. E. Moore and E. A. Smart, 3rd edition, Taylor and Francis

(2005)

17. Molecular Reaction Dynamics, R. D. Levine, Cambridge University Press, 2006

18. Catalysis: Concepts and Green Applications, G. Rothenberg,Wiley-VCH, 2008

19. Principles and Practice of Heterogeneous Catalysis, J. M. Thomas, W. J. Thomas,

Wiley, 2015

20. Advanced Polymer Chemistry: A Problem Solving Guide, M. Chanda, Marcel Dekker, 2000

21. Textbook of Polymer Science F. W. Billmeyer Jr., 3rd edition, John Wiley, 1991

22. Micelles, Theoretical and Applied Aspects by Moroi Y, Springer publication 1992

MCH-104: INORGANIC CHEMISTRY-I 60h

Unit-I

Stereochemistry and Bonding in Main Group Compounds

VSEPR theory & drawbacks, Bent rule, MO theory, Energy level diagram for F2, O2, CO, NO.

Walsh diagram (triatomic and pentatomic).

Unit-II

Chemistry of Transition Elements-I

Page 10: COURSE STRUCTURE M. Sc. Chemistry

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General characteristic properties of transition elements, crystal field theory: Splitting of energies

of orbitals under ocatahedral, tetrahedral and square planar environment, crystal field

stabilization energy, limitations of CFT.

Unit-III

Chemistry of Transition Elements-II

Heats of hydration, lattice energy, spectrochemical series, Jahn-Teller effect, stability of

coordination complexes and factors effecting stability, nephelauxetic effect, ligand field theory,

splitting of d orbital’s in low symmetry environments, molecular orbital theory as applied to

metal complexes, brief introduction to Angular Overlap Model.

Unit-IV

Chemistry of Transition Elements-III

Spectroscopic ground states, terms and symbols, selections rules, correlation, Orgel and

Tanabe-Sugano diagrams for transition metal complexes (d1-d9 states), Vibronic

transitions, calculation of 10 Dq, B and β parameters, Magnetic moments, Magnetic

properties of transition metal complexes, Inter-ion magnetic coupling, anomalous

magnetic moments, magnetic exchange coupling and spin crossover, comparison of

first transition series with 2nd and 3rd transition series.

Recommended Books:

1. Inorganic Chemistry - Principles, structure and reactivity, J. E. Huhey, Harper and Row.

2. Concise Inorganic Chemistry, J. D. Lee, Elbswith Chapman and Hall, London

3. Theoretical Inorganic Chemistry, M. C. Day and J. Selbin, Reinhold, EWAP

4. Advanced Inorganic Chemistry, F. A. Cotton, R. G. Wilkinson, John Wiley.

5. Modern Inorganic Chemistry, Willam L. Jooly.

6. Atomic Structure and Chemical bonding, Manas Chanda.

7. Chemistry of Elements, N. N. Greenwood and A. Earnshaw, Pergamon

8. Inorganic Electronic Spectroscopy, A. B. P. Lever, Elsevier.

9. Structural Inorganic Chemistry – A. F. Wells, 5th edition (1984).

10. Electrons and Chemical Bonding. (Section 2) H. B. Gray, W.A. Benjamin. London

(1965)

11. Physical Methods in Inorganic Chemistry, R. S. Drago, Affiliated East-West Press

(Section 1& 2) 2nd edition, Reinhold New York (1968)

MCH -105: LAB COURSE-I

a. Inorganic Chemistry

1. Quantitative separation and determination of pairs of metal ions using volumetric analysis.

2. Quantitative separation and determination of pairs of metal ions using gravimetric methods.

3. Qualitative and quantitative analysis of insolubles-oxides, sulphates and halides

4. Complexometric titrations.

5. Preparation, to purification and structural elucidation of some of the complexes from the

following by available phyco-chemical and spectral methods:

a. Mn(acac)3

b. [Co(Py)2Cl2]

c. [Ni(NH3)6 ]Cl2

d. Ni(dmg)2

Page 11: COURSE STRUCTURE M. Sc. Chemistry

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e. [Cu(NH3)4 ]SO4.H2O

b. Organic Chemistry

1. Identification and separation of compounds of binary mixture by thin layer

chromatography.

2. One step synthesis of the following:

a. 3,5- dimethyl pyrazole from acetyl acetone

b. ortho- Benzoyl benzoic acid from phthalic anhydride

c. para- Nitrobenzoic acid from paranitrotoluene

d. Anthraquinone from anthracene

e. Benzhydrol from benzophenone

f. Chalcones from aromatic aldehydes

g. 1-Phenylazo-2-naphthol from aniline

3. Separation /Purification techniques -crystallization, distillation methods (atmospheric/

vacuum).

c. Physical Chemistry

1. Simultaneous determination of surface tension and viscosity with survismeter.

2. Verification of the limit of Beer-Lambert’s law using potassium permanganate solution.

3. Preparation of buffer solutions and determination of their pH values.

4. Potentiometric titration of phosphoric acid using NaOH and standard Potassium hydrogen

phthalate.

5. Determination of the primary salt effect on the kinetics of ionic reaction and testing of the

Bronsted relationship (iodide ion is oxidized by persulphate ion)

6. Determination of the degree of dissociation of weak electrolyte and to study the deviation

from ideal behaviour that occurs with a strong electrolyte.

7. Determination of pKa of an indicator.

8. Adsorption: study of surface tension – concentration – relationship for solutions (Gibbs

equation)

Recommended Books:

1. Inorganic Experiments, J. Derek Woolins, VCH

2. Findley’s Practical Physical Chemistry, revised B.P. Levitt, longmann

3. Vogels Text book of Practical Organic Chemistry, Pearson education.

4. Microscale Inorganic Chemistry, Z. Szafran, R. M. Pike and M. M. Singh, Wiley

5. Practical Inorganic Chemistry, G. Marr and B. W. Rockett, Van Nostrand

6. The Systematic Identification of Organic Compounds, R.L. Shriner and D.Y Curtin

7. Semimicro Qualitative Organic Analysis, N.D. Cheronis, J.B. Entrikin and E.M. Hodnett

8. Experimental Organic Chemistry, M.P. Doyie and W.S. Mungall

9. Small Scale Organic Preparation, P.J. Hill

10. Organometallic Synthesis, J. J. Fisch and R. B. King, Academic

11. Experimental Physical Chemistry, D.P. Shoemaker, C.W. Garland and J.W. Niber,

McGraw Hill Interscience

Page 12: COURSE STRUCTURE M. Sc. Chemistry

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12. Experiments in Physical Chemistry, J.C. Ghosh, Bharti Bhawan

13. Synthesis and Characterization of Inorganic Compounds, W. L. Jolly, Prentice Hall

Page 13: COURSE STRUCTURE M. Sc. Chemistry

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SEMESTER-II

MCH-CBCS-201 (01): CHEMISTRY IN LIFE-I 60hrs

Unit-I

Drug Design and Action:

Introduction to Drug Design- Different, Mode of Drug action, Drug receptors, types of receptors

-general introduction, Drug-Receptor Interaction, Drug action, Pharmacokinetics, and

pharmacodynamic properties of drugs, Biological factors affecting metabolism, Drug

metabolism, Prodrug concept, natural and synthetic compounds of medicinal importance.

Unit II

Industrial Chemicals

Explosives (Primary and Secondary Explosives). Corrosion, surface coating, refractories and

abrasives, lubricants, Cement, Paper Industry (Pulp and Pulping Process).

Unit-III

Bioinorganic Chemistry

Role of metal ions in biological processes, Oxygen uptake proteins-Myoglobin and

Haemoglobin. Metalloenzymes and metalloproteins: Introduction and role in biological

systems. Biological nitrogen fixation. PS-I, PS-II.

Unit IV

Biopolymers

Definition of Biopolymers and types of biopolymers, structure and isolation of biopolymers:

chitosan, alginates, and cellulose, modification of biopolymers, environmental impact of

biopolymers, latest development and applications of biopolymers.

Recommended Books:

1. Applied chemistry for Engineer by Diamont.

2. Industrial poisons and solvents by Jacobs.

3. Chemistry of engineering materials by Jain & Jain.

4. Engineering chemistry by B. K. Sharma.

5. P.S.Kalsi, J. P.Kalsi Bioorganic, Bioinorganic and Supramolecular Chemistry

6. Biopolymers: Biomedical and Environmental Applications by Susheel Kalia and Luc

Averous-Wiley Publications

Page 14: COURSE STRUCTURE M. Sc. Chemistry

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MCH-CBCS-201 (02): APPLIED CHEMISTRY-II 60hrs

Unit-I

Water treatment and analysis: characteristics of water - alkalinity - hardness - unit of hardness,

Purification of water for drinking purpose - potability of water - clarification - coagulation -

contact & electro chemical coagulation - sterilization & disinfection of water - precipitation -

aeration - ozonisation - Chlorination.

Unit-II

Food Preservatives & additives: Definition - classification - Food Spoilage, Methods of

preservation - classification - Low and high temperature - preservatives examples - Dehydration

- osmotic pressure - food irradiation, Food additives– classification - their functions - chemical

substance, Packaging of foods - classification-Materials used for packaging.

Unit-III

Ecosystem and biodiversity: Ecosystem Concepts – structure – Functions and types of

ecosystem – Abiotic and biotic components – Energy flow and Energy dynamics of ecosystem –

Food chains – Food web – Tropic levels – Biogeochemical cycles (carbon, nitrogen and

phosporus) Biodiversity – magnitude and distribution of biodiversity – trends - biogeographical

classification of india – biodiversity at national, global and regional level.

Unit-IV

Clinical analysis of blood: Composition of blood,clinical analysis,trace elements in the

body.Estimation of blood chlolesterol,glucose,enzymes,RBC & WBC ,Blood gas analyser.

Recommended Books:

1. Industrial Chemistry (including chemical - engineering) - B.K. Sharma - Goel publishing house.

2. 2. Water pollution and management - C.K. Varashney - Wiley Eastern Ltd., Chennai - 20.

3. Food Science - III Edition - B. Sri Lakshmi. New Age International Publisher, 2005.

4. Food Chemistry - Lilian Hoagland Meyer CBS Publishers & Distributors, 2004.

5. Food Science, Nutrition and Health - Brian.A.Fox, Allan G.Cameron Edward Arnold, London.

6. Fundamentals of ecology by M.C.Dash

7. A Text book of Environmental chemistry by W. Moore and F.A. Moore

8. Environmental Chemistry by Samir k. Banerji

9. A.I.Vogel-A text book of quantitative Inorganic analysis-ELBS,

10. F.D.Snell & F.M.Biffen-Commercial methods of analysis-D.B.Taraporavala & sons,

11. J.J.Elving and I.M.Kolthoff- Chemical analysis - A series of monographs on analytical

chemistry and its applications -- Inter Science- Vol I to VII.

Page 15: COURSE STRUCTURE M. Sc. Chemistry

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MCH-202: ORGANIC CHEMISTRY-II 60hrs

Unit I

(a) Aliphatic Electrophilic Substitution

Bimolecular mechanisms-SE2 and SEi. The SE1 mechanism, electrophilic substitution

accompanied by double bond shifts. Effect of substrates, leaving group and the solvent polarity

on the reactivity.

(b) Aromatic Electrophilic Substitution

The arenium ion mechanism, orientation and reactivity. The ortho / para ratio, ipso attack,

orientation in other ring systems, quantitative treatment of reactivity in substrates and

electrophiles. Diazonium coupling, Vilsmeir reaction, Gatterman-Koch reaction.

Unit-II

(a) Addition to Carbon-Carbon Multiple Bonds

Mechanistic and stereochemical aspects of addition reactions involving electrophiles,

nucleophiles and free radicals, regio and chemoselectivity, orientation and reactivity.

Hydrogenation of double and triple bonds, Hydrogenation of aromatic rings. Hydroboration.

Michael reaction.

(b) Addition to Carbon-Hetero Multiple Bonds

Mechanism of metal hydride reduction of saturated and unsaturated carbonyl compounds, acids,

esters and nitriles. Addition of Grignard reagents, organozinc and organolithium reagents to

carbonyl and unsaturated carbonyl compounds.

Mechanism of condensation reactions involving enolates-Aldol, Knoevenagel, Claisen,

Mannich, Benzoin, Perkin and Stobbe reactions.

Unit-III

(a) Free Radical Reactions

Types of free radical reactions, free radical substitution mechanism, mechanism at an aromatic

substrate. Reactivity for aliphatic and aromatic substrates at a bridgehead.

Alicyclic halogenation (NBS), auto-oxidation, coupling of an alkynes and arylation of aromatic

compounds by diazonium salt. Sandemeyer reaction. Free radical rearrangement. Hunsdiecker

reaction.

(b) Elimination Reactions

The E2, E1 and E1cB mechanisms, orientation of the double bond, reactivity effects of substrate

structures, attacking base, the leaving group and the medium. Mechanism and orientation in the

pyrolytic elimination.

Unit-IV

Reactions and Rearrangements

Barbier- Wieland degradation, Dakin, Duff, Elbs persulphate, Nef, Pechmann, Tishchenko,

Ulmann, Vilsmeier reaction, Wittig reaction, Stork-enamine alkylation. Palladium catalyzed

reactions-Suzuki, Heck, Negishi coupling reactions.

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Rearrangements- Pinacol-pinacolone, Wagner-Meerwein, Demjanov, Benzil-Benzylic,

Favorskii, Arndt-Eistert synthesis, Curtius, Schmidt, Baeyer-Villiger, Shapiro, Beckmann

reaction.

Recommended Books:

1. Organic Chemistry Vol. I. By I.L. Finar

2. Problems and Solutions by I.L. Finar

3. Reaction Mechanism in Organic Chemistry- S. M. Mukherji and S. P. Singh, revised by

S.P. Singh and Om Prakash, 2016 Edition.

4. Modern Methods of Organic Synthesis by Carruthers, W and Iain Coldham

5. Organic Chemistry- R. T. Morrison and R. N. Boyd, (Prentice Hall)

6. Modern Organic Reactions (Benjamin) H. O. House.

7. Principle of Organic Synthesis-R. O. C. Norman and J. M. Coxon. (ELBS)

8. Advanced Organic Chemistry (McGraw-Hill)- J. March

9. Basic Principles of Organic Chemistry (Benjamin) J. D. Roberts and M. C. Caserio.

10. A Guide Book to Mechanism in Organic Chemistry (Orient-Longmens)-Peter Sykes

11. Organic Chemistry (McGraw-Hill) Hendrikson, Cramand Hammond.

12. Modern Organic Synthesis: An Introduction, George S. Zweifel, Michael H. Nantz

MCH -203: PHYSICAL CHEMISTRY-II 60hrs

Unit I

Quantum Mechanics

Basic postulates of quantum mechanics, Schrodinger equation. Solution of the Schrodinger

equation model like particle in a box, the harmonic oscillator, the rigid rotor, the hydrogen atom.

Approximate Methods and Molecular Orbital Theory

The variation theorem, linear variation principle. Perturbation theory (first order and non-

degenerate) and their application

Huckel theory of conjugated system. Introduction to extended Huckel theory.

Symmetry and Group Theory: Determination of point group of a molecule, representations, the

great orthogonality theorem, character table, and construction of character tables for c2v and c3v

groups, symmetry adapted atomic basis sets, construction of molecular orbitals.

Unit II

Angular Momentum and Electronic Structure of Atom

Eigenfuctions for angular momentum, eigenvalues of angular momentum.

Russell-Saunders term and coupling schemes, Slater-Condon parameter, term separation energy

of pn configuration, term separation energy for the dn configuration, magnetic effects: spin orbit

coupling and Zeeman splitting.

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Unit III

Classical Thermodynamics

Third law of thermodynamics, Nernst theorem, attainability of absolute zero, the thermodynamic

treatment of phase equilibria, thermodynamic properties of solutions, chemical potential,

chemical potential of real gases and fugacity, thermodynamic function of mixing,

thermodynamic treatment of ideal and non-ideal solutions, concept of activity, excess

thermodynamic functionsFree energy, chemical potential and entropy. Partial molar quantities

and their physical significance. Concepts of fugacity and determination of fugacity. Application

of phase rule to different component system.

Non Equilibrium Thermodynamics

Thermodynamic criteria for non – equilibrium condition, entropy production and entropy flow,

non equilibrium stationary states, phenomenological equation, microscopic reversibility and

Onager’s reciprocity relation, electrokinetic phenomena, diffusion, electric conduction,

irreversible thermodynamics for biological system, coupled reaction.

Unit IV

Statistical Thermodynamics:

Statistical ensembles. Basic postulates. Probability calculations. Behaviour of the density of

states. Equilibrium conditions and constraints. Reversible and irreversible processes. Distribution

of energy between systems in equilibrium. Canonical distribution and its simple applications.

Ensembles used as approximation. Quantum Statistics of ideal gases. Identical particles and

symmetry requirements. Quantum distribution functions. Maxwell-Boltzman, Photon,

BoseEinstein, and Fermi-Dirac statistics. Quantum statistics in the classical limit.

Recommended Books:

1. Elementary Quantum Chemistry by F. L. Pilar, Dover Publications, Inc. NY, 1990. 2nd Ed.

2. Molecular Quantum Mechanics by P. W. Atkins and R. S. Friedman, 3rd Ed., Oxford Univ.

Press, 1997.

3. Quantum Chemistry by Ira N. Levine, Prentice Hall,

4. Introduction to Quantum Chemistry by A. K. Chandra, Tata McGraw Hill.

5. Quantum Chemistry, I.R. Levine, Prentice Hall India (Ltd), 1995.

6. Quantum Chemistry, D. A. McQuarrie, Oxford University Press, 1983.

7. Lectures on Chemical Bonding and Quantum Chemistry, S. N. Datta, Prism Books, 1998.

8. “Thermodynamics and an Introduction to Thermostatistics”, Callen, H. B., John Wiley and

Sons. 1985

9. Kondepudi, D. and Prigogine, I. , “Modern Thermodynamics: From Heat Engines to

Dissipative Structures”, John Wiley & Sons. 1998

10. Molecular Driving Forces: Statistical Thermodynamics in Chemistry and Biology, K. A. Dill

and S. Bromberg, Garland Science, 2010.

11. Irreversible Thermodynamics, Theory and Applications, K. S. Forland, T. Forland and S.K.

Ratkje, John Wiley,1988.

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12. Physical Chemistry, 3rd edition, G. W. Castellan, Narosa Publishing House, 1985

13. Physical Chemistry, R. S. Berry, S. A. Rice and J. Ross,John Wiley, 1980.

14. Chemical Thermodynamics, F. T. Wall, W. H. Freeman and Co., 1965.

15. Thermodynamics, G. N. Lewis, M. Randall, K.S. Pitzer and L. Brewer, McGraw Hill, 1961.

16. Statistical Thermodynamics, T. L. Hill, Addison Wesley, 1960.

17. Physical Chemistry - A Molecular Approach, D. A. McQuarrie and J. D. Simon, Viva

Books Pvt. Ltd. ( 1998 )

18. Symmetry and Spectroscopy of Molecules, K. Veera Reddy, New Age International Pvt.

Ltd. New Delhi (1999).

MCH-204: INORGANIC CHEMISTRY-II 60h

Unit-I

Kinetics and Mechanism of Substitution Reactions:

Nature of substitution reactions: prediction of reactivity of octahedral, tetrahedral and square-

planar complexes in terms of crystal field stabilization energy and structure preference energy;

rates of reactions; acid hydrolysis, base hydrolysis and anation reactions.

Unit-II

a) Organometallic Chemistry

Ligand hapticity, synthesis, structure and bonding organometallic compounds, organometllic

compounds in organic synthesis, homogeneous catalytic reactions (Hydrogenation,

hydroformylation, isomerisation and polymerisation), transition metal pie complexes.

b) Metal Carbonyls and Related Compounds:

Preparation, structure, and properties: bonding in metal carbonyls, variants of CO bridging,

vibrational spectra of metal carbonyls, principal reaction types of metal carbonyls.

Unit-III

Chemistry of Non-Aqueous Solvents

Classification of solvents, properties, levelling effect, type of reactions in solvents, chemistry of

liquid ammonia and liquid acetic acid with respect to properties, solubility and reactions.

Unit-IV

Inorganic Rings, Chains and Cages:

Chains: Catenation, heterocatenation, isopolyanions and heteropoly anions;

Rings: Borazines, Phosphazenes;

Cages: Cage compounds having phosphorus, oxygen, nitrogen and sulphur:

Boranes,Carboranes.

Recommended books:

1. Inorganic Chemistry- Principles, structure and reactivity, J. H. Huheey, Harper and Row

Publisher, Inc. New York (1972)

2. Concise Inorganic Chemistry, J. D. Lee, Elbs with Chapman and Hall, London

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19

3. Theoretical Inorganic Chemistry, M.C. Day and J. Selbin, Reinhold, EWAP

4. Organometallic Chemistry, T. S. Swain and D. S. T. Black.

5. Structure and Properties of Materials, JohnWulff,Volume–4, Electronic properties, Wiley

Eastern

6. Advanced Inorganic Chemistry- F. A. Cotton, R. G. Wilkinson.

7. Modern Inorganic Chemistry- Willam L. Jooly.

8. Organometallic Chemistry- P. L. Pauson.

9. Chemistry in non–aqueous solvents, H. S. Sisler, Reinhold Publishing Corporation, USA, 4th

edition (1965)

10. Inorganic Chemistry- Gary L. Miessler and Donald A. Tarr.

MCH -205: LAB COURSE-II

a. Inorganic/Analytical Chemistry

1. Preparation of selected coordination complexes and their characterization by physical,

magnetic and spectral techniques.

2. Volumetric analysis: redox, complexometric and precipitation titrations.

3. Column Chromatography: separation of mixture of ortho and para-Nitroanilines or of

given sample.

4. Determination of Pb/Cd by AAS.

b. Organic Chemistry

1. Two step preparation, separation, purification and characterization (UV/IR

spectroscopy) of following compounds:

i. Sym-tribromobenzene from aniline.

ii. para -Nitroaniline from acetanilide.

iii. Benzanilide from benzophenone.

iv. para –Amino benzene sulphanamide from acetanilide

v. Anthraquinone from phthalic anhydride.

vi. Preparation of Benzilic acid from Benzoin

c. Physical Chemistry

1. To determine the adsorption isotherm of acetic acid from aqueous solution by charcoal.

a. Freundlich adsorption isotherm

b. Langmuir adsorption isotherm

c. BET adsorption isotherm

2. Determination of the specific rotation of sucrose & tartaric acid.

3. Determine the cell constant of a given conductivity cell at a given temp.

4. Determine the equivalent conductance of a strong electrolyte at several concentration at a

given temperature and test the validity if Onseger’s equation .

5. Determination of the rate constant for the oxidation of iodide ions by hygrogen peroxide

studying the kinetics as an iodine clock reaction.

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6. Electrochemistry: Determination of solubility and solubility product of sparingly soluble

salts (PbSO4, BaSO4) conductometrically, Potentiometry, pHmetry:

7. To study the quenching of fluorescence of organic dye(s).

Recommended Books:

1. Inorganic experiments, J. Derek Woolins, VCH

2. Microscale Inorganic Chemistry, Z. Szafran, R. M. Pike and M. M. Singh, Wiley

3. Practical Inorganic Chemistry, G. Marr and B. W. Rockett, Van Nostrand

4. Systematic identification of organic compounds, R.L. Shriner and D.Y Curtin

5. Semimicro qualitative organic analysis, N.D. Cheronis, J.B. Entrikin and E.M. Hodnett

6. Experimental organic chemistry, M.P. Doyie and W.S. Mungall

7. Small scale organic preparation, P.J. Hill

8. Organometallic synthesis, J. J. Fisch and R. B. King, Academic

9. Experimental physical chemistry, D.P. Shoemaker, C.W. Garland and J.W. Niber,

McGraw Hill Interscience

10. Findley’s Practical Physical Chemistry, revised B.P. Levitt, longmann

11. Vogels, text book of Practical Organic Chemistry, Pearson education.

12. Experiments in physical chemistry, J.C. Ghosh, Bharti Bhawan

SEMESTER-III

MCH-301: SUPRAMOLECULAR, BIOINORGANIC AND BIOORGANIC CHEMISTRY

60hrs

Unit-I

Definition of supramolecular chemistry. Nature of binding interactions in supramolecular

structures. Synthesis and structure of crown ethers, lariat ethers, podands, cryptands, spherands,

calixarenes, cyclodextrins, cyclophanes, cryptophanes, carcerands and hemicarcerands.

Unit-II

Bioinorganic Chemistry: Role of metal ions in biological processes, structure and properties of

metalloproteins in electron transport processes-cytochromes, ferrodoxins and iron sulphur

proteins, Biological nitrogen fixation, PS-I, PS-II, Oxygen uptake proteins.

Unit-III

Molecules of Life-Carbohydrates- polysaccharides, lipids, cell membranes, nucleic acid.

Amino acids and proteins, Ramachandran plot, protein folding: DNA/RNA structures, various

forms (a, b, c, z) of DNA.

Metabolism and Energetics: Glycolysis , citric acid cycle , oxidative phosphorylation.

Unit-IV

Metalloenzymes: Hydrolytic and redox enzymes: Carbonic anhydrase and superoxide dismutase

Oxygen uptake Proteins: Hemerythrin and hemocyanin

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21

Molecular Recognition: Molecular organization, Chiral recognition and role of sugar in

biological recognition

Recommended books

1. Lehn, J. M. Supramolecular Chemistry: Concepts & Perspectives Wiley-VCH (1995).

2. Balzani, V. Photochemistry of Coordination Compounds Academic Press (1970).

3. Desiraju, G. R., Ed. Perspectives in Supramolecular Chemistry, Vol. 2: Crystal

Engineering and Molecular Recognition Wiley: Chichester (1995).

4. Atwood, J. L. & Steed, J. W. Supramolecular Chemistry: A Concise Introduction John

Wiley & Sons (2000).

5. P.S.Kalsi, J. P.Kalsi Bioorganic, Bioinorganic and Supramolecular Chemistry

6. L. Stryer, Biochemistry, 5th Edition, (2002) Freeman &Co. New York

7. D.L. Nelson and M.M. Cox, Lehninger Principles of Biochemistry 3rd Edition ((2002)

McMillan North Publication

8. D. Voet, J. G. Voet, Biochemistry 3rd Edition (2004), Wiley International Publication.

9. I. Bertini, H. B. Gray, S. J. Lippard, J.S. Valentine, 1st South Asian Edn., (1998) Viva

Books Pvt. Limited, New Delhi M. B. Smith, Organic Synthesis, (1998) Mc Graw Hill Inc,

New York

MCH -302: ORGANIC CHEMISTRY-III 60hrs

Unit I

Organic Photochemistry

Photochemistry of alkenes and related compounds- Isomerization, Di-π-methane rearrangement

and cycloadditions.

Photochemistry of aromatic compounds-Ring isomerization and cyclization reactions.

Photochemistry of carbonyl compounds-Norrish type-I and type-II cleavage, photoenolization,

Paterno-Buchi reaction, photodimerisation of α, β- unsaturated ketones, rearrangement of enones

and dienones, Photo-Fries rearrangement, Barton reaction

Unit II

Pericyclic Reactions

Classification of pericyclic reactions, Woodward- Hoffmann correlation diagrams. FMO and

PMO approach, Frontier orbitals of ethylene 1,3 butadiene, 1,3,5 hexatriene and allyl system,

Electrocyclic reactions- conrotatory and disrotatory motion, 4n, 4n+2 and allyl systems.

Cycloadditions – antarafacial and suprafacial addition, 4n and 4n+2 systems, 2+2 addition of

ketenes, 1,3, dipolar cycloadditions. Sigmatropic rearrangements.

Unit-III

(a) Oxidations: Metal based and non-metal based oxidations of alcohols to carbonyls

(aluminium, DMSO, hypervalent iodine and TEMPO based reagents), alkenes to epoxides

alkenes to diols, Prevost reaction and Woodward modification, selenium based allylic

oxidation, ketones to ester/lactones.

(b) Reductions Catalytic hydrogenation (Heterogeneous: Palladium/Rhodium; Homogeneous:

Wilkinson), Hydride transfer reagents (i) NaBH4 triacetoxyborohydride, L-selectride, K-

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22

selectride, Luche reduction; LiAlH4, DIBAL-H, and Red-Al; Trialkylsilanes, Meerwein-

Pondorff-Verley reduction

Unit –IV

(a) Synthetic design

Reterosynthetic analysis, Reactivity Umpolung, functional group interconversion, donor acceptor

disconnection in the carbon-carbon single bond formation. Domino reactions, olefin metathesis.

(b) Green Chemistry

Introduction to Principles and concepts of green chemistry.

Approaches for green synthesis:

a. Green starting materials

b. Green reagents

c. Green solvents and reaction conditions

d. Green catalysis

Future trends in Green Chemistry.

Recommended books:

1. Fundamental of Photochemistry, K. K. Rohatgi-Mukherjee, New Age International (P)

Ltd., New Delhi, 1986.

2. Modern Molecular Photochemistry of Organic Molecules, N. J. Turro, V. Ramamurthy,

J. C. Scaiano, University Science, Books, CA, 2010.

3. Photochemical Synthesis, I. Ninomiya, T. Naito, Academic Press, New York, 1989.

4. Reaction Mechanism in Organic Chemistry- S. M. Mukherji and S. P. Singh, revised by

S.P. Singh and Om Prakash, 2016 Edition.

5. Pericyclic Reactions-A Mechanistic and Problem Solving Approach- Sunil Kumar Vinod

Kumar S.P. Singh, Academic Press

6. Principle of organic synthesis- R. O. C. Norman and J. M. Coxon. (ELBS)

7. Advanced organic chemistry (Mc Graw- Hill) J. March.

8. Jagdamba Singh and L D S Yadav, Advanced Organic Chemistry / Organic Synthesis,

Pragati Prakashan, 2011.

9. I. Fleming, Pericyclic Reactions, Oxford University Press, Oxford (1999).

10. Modern organic synthesis: An Introduction, George S. Zweifel, Michael H. Nantz

11. Green Chemistry: Theory and Practice. P.T. Anastas and J.C. Warner. Oxford University

Press.

12. Green Chemistry: Introductory Text. M. Lancaster Royal Society of Chemistry (London).

13. Introduction to Green Chemistry. M.A. Ryan and M.Tinnesand, American Chemical

Society (Washington).

14. Alternative Solvents for Green Chemistry. F.M. Kerton. Royal Society of Chemistry

(London).

15. Recoverable and Recyclable Catalysts. M. Benaglia. Wiley.

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23

16. Handbook of Green Chemistry & Technology. J. Clark and D. CHquarrie. Blackwell

Publishing.

17. Eco-Friendly Synthesis of Fine Chemicals. R.Ballini. Royal Society of Chemistry

(London)

MCH -303: PHYSICAL CHEMISTRY-III 60hrs

Unit I

Solid State Reactions and Crystal Defects

Kinetics of solid state reactions

Perfect and imperfect crystals, intrinsic and extrinsic defects – point defects, line and plane

defects and their thermodynamics ( Schottky and Frenkel defect formation), colour centers, non-

stoichiometry in solids.

Electronic Properties and Band Theory

Metals, insulators and semiconductors, electronic structure of solids band theory, band structure

of metals, insulators and semiconductors.

Intrinsic and extrinsic semiconductors, doping semiconductors, p-n junctions, super conductors.

Optical Properties – Optical reflectance, photoconduction photoelectric effects.

Unit II

Magnetic and Electric Properties

Classification of materials: Quantum theory of paramagnetics cooperative phenomena-magnetic

domains, hysteresis.

Electrically conducting solids, organic charge transfer complex, organic metals, new

superconductors

Unit III

Photophysical Processes and Photochemical Reactions

Electron transfer reactions, Photoconduction, Chemiluminiscence, Atom sensitized reactions,

sensitization and quenching, Photosensitization, Stern – Volmer equation. Photosynthesis,

Photomorphogenesis and Photochemistry of vision.

Interaction of electromagnetic radiation with matter, types of excitations, fate of excited

molecule, quantum yield, transfer of excitation energy.

Phosphorescence and the triplet state, Delayed Fluorescence, Energy level diagrams, Intersystem

crossing (Jablonski diagram), Franck –Condon Principle, Physical properties of excited

molecules, Light emission and chemical reaction from excited states, Radiationless

deactivation of excited states.

Biopolymers and their Molecular Weights

Evaluation of size, shape, molecular weight and extent of hydration of biopolymers by various

experimental techniques.

Page 24: COURSE STRUCTURE M. Sc. Chemistry

24

Unit IV

Biophysical Chemistry

Biological Cell and Its Function

Biological cell, structure and functions of proteins, enzymes, DNA and RNA in living systems.

Helix coil transition.

Cell Membrane and Transport of Ions

Structure and functions of cell membrane, ion transport through cell membrane, irreversible

thermodynamic treatment of membrane transport.

Recommended books:

1. Solid State Chemistry, L. E. Moore and E. A. Smart, 3rd edition, Taylor and Francis

(2005)

2. Solid State Physics, N. W. Ashcroft and N. D. Mermin, Harcourt College Publishers

(1976)

3. Solid State Chemistry, A. R. West, paperback edition, Wiley (2007)

4. P. L. Houston, Chemical Kinetics and Reaction Dynamics, Dover, 2006

5. 2. J. I. Steinfeld, J. S. Francisco, and W. L. Hase,Chemical Kinetics and Dynamics, 2nd

Edition, Prentice Hall, 1998

6. Nelson DL and Cox MM; Lehninger principles of biochemistry, Sixth edition, WH

Freeman and company, 2012

7. Berg JM, Tymoczko JL and Stryer L; Biochemistry, Seventh edition, WH Freeman

and company, 2011

8. Voet D and Voet JG; Biochemistry, Fourth edition, John Wiley and Sons, 2011

9. Pelczar MJ, Chan ECS and Krieg NR; Microbiology, Tata McGraw-Hill, Fifth

edition,2008 (37Th reprint)

10. R. J. Simond, Chemistry of Biomolecules, Royal Society of Chemistry, U.K. London,

1992.

11. C. Kittel, Introduction to Solid State Physics, 6th edition, Wiley, 1991.

12. A. R. West, Solid State Chemistry and Its Applications, Wiley, 1989.

13. P. A. Cox, Electronic Structure and Chemistry of Solids, Oxford University Press, 1991.

14. A. W. Adamson, Physical Chemistry of Surfaces, Wiley, 1990.

15. H. V. Keer, Principles of the Solid State, Wiley Eastern, 1993.

16. D. K. Chakrabarty, Solid State Chemistry, New Age International, 1996.

17. A. Zangwill, Physics at Surfaces, Oxford University Press, 1988.

18. K. K. Rohatagi-Mukherjee, Fundamentals of Photochemistry, Wiley Eastern, 1978.

19. M. S. Wrighton, Inorganic and Organometallic Photochemistry, ACS Pub.,1978.

20. V. Balzani and V. Carasiti, Photochemistry of Co-ordination compounds, Academic

Press,1970.

Page 25: COURSE STRUCTURE M. Sc. Chemistry

25

MCH -304: ANALYTICAL CHEMISTRY 60hrs

Unit I

Separation Methods-I

General principle, Classification of chromatographic methods: adsorption chromatography,

partition chromatography, size exclusion chromatography, ion exchange chromatography,

affinity chromatography. Nature of partition forces. Chromatographic behaviour of components.

Distribution Coefficient, Rf value, Retardation, Retention, Capacity factor, Separation factor,

Column efficiency and resolution. Van Deemter equation. Thin layer chromatography: Solvents

used in methods of detection.

Unit II

Separation Methods-II

Column chromatography: Adsorption and partition methods. Nature of column materials.

Gas Chromatography: Principle and Instrumentation, general components of a gas

chromatography, mobile systems, sample injection system, GC detectors.

HPLC: Principle and Instrumentation, general components of a high performance liquid

chromatography, solvent delivery systems, sample injection system, HPLC detectors.

Hyphenated techniques: LC-MS.

Unit-III

Solution Equilibria

General treatment of equilibria in aqueous medium involving monoprotic weak acid and weak

base, and salts of weak acids and weak bases. Calculation of pH, Constructing titration curves

from charge balance and mass balance equations, acid-base titrations, redox titration,

complexometric titrations, precipitation titrations.

Unit IV

Thermal Analysis

Thermogravimetric analysis (TGA), Differential Thermal Analysis (DTA), and Differential

scanning calorimetry (DSC): Principles, techniques and applications of thermometric titration

methods

Recommended books:

1. Modern Methods of Chemical Analysis, R. L. Pecsok, L. D. Shields, T. Cairns and L.C. Mc

William, 2nd Edition (1976), John Wiley, New York.

2. Analytical Chemistry, G. D. Christian, 5th Edition (1994), John Wiley & Sons, New York.

3. Analytical Chemistry - An Introduction, D. A. Skoog, D.M. West, F.J. Holler, S.R. Crouch,

7th Edition (2000), Saunders College Publishing, Philadelphia, London.

4. Analytical Chemistry: Principles, J. H. Kennedy, 2nd Edition (1990), Saunders Holt, London.

5. Principal of Instrumental Analysis, D. Skoog and D. West

6. Analytical Chemistry, G. D. Christian

7. Instrumental Methods of Inorganic Analysis (ELBS): A. I. Vogel

Page 26: COURSE STRUCTURE M. Sc. Chemistry

26

8. Introduction to Chromatography, Bobbit

9. Instrumental Methods of Analysis (CBS), H. H. Willard, L. L. Mirrit, J. A. Dean

10. Instrumental Methods of Analysis, Chatwal and Anand

11. Chemical Instrumentation: A Systematic Approach, H. A. Strobel

MCH -305: LAB COURSE-III

a. Organic Chemistry

1a. Extraction of Natural Products:

i. Citric acid from lemon.

ii. Lactose and casein from milk

iii. Caffeine from tea leaves.

1b. Synthesis and purification of organic compounds using column chromatography in the

following reactions:

1. Grignard Reaction (Under inert atmosphere)

2. Cross coupling reaction using organometallic reagent.

3. Protection/deprotection of amine and alcohols

4. Multicomponent/Domino reactions

1c. Green Techniques-Transformation using sonicator/microwave synthesizer.

b. Polymer/Inorganic Chemistry

1. Molecular weight determination by viscocity method

2. Determination of molecular weight of polymers by osmotic pressure method,

3. Calculation of Physico-chemical properties of a biomolecules by computational

software

4. Preparation, purification and structural elucidation of following complexes by

available phyco-chemical and spectral methods.

a. Chloropentaaminecobalt (III) chloride.

b. Bis (cyclopentadienyl) iron (II), Ferrocene.

c. Fe-Phenanthroline complex

5. Supramolecules catalysed reactions using cyclodextin/crown ethers.

Recommended Books:

1. Experimental physical chemistry, D.P. Shoemaker, C.W. Garland and J.W. Niber,

McGraw Hill Interscience

2. Findley’s practical physical chemistry, revised B.P. Levitt, longmann

3. Vogels, text book of practical organic chemistry, pearson education.

4. Experiments in physical chemistry, J.C. Ghosh, Bharti Bhawan

5. D. G. Hundiwale, V. D. Athawale, U. R. Kapadi, V. V. Gite, Experiments in Polymer

Science, New Age International Pvt. Ltd., New Delhi, 2009.

6. F. J. Davis, Polymer Chemistry-Practical Approach in Chemistry, Oxford University

Press, Oxford, 2004.

7. Quantitative organic analysis, Vogel’s.

Page 27: COURSE STRUCTURE M. Sc. Chemistry

27

SEMESTER-IV

MCH -401: Spectroscopic Techniques in Chemistry

Unit I

UV-Visible spectroscopy: Basics of photometry, Lambert beer’s law, Woodward-Fisher rule

and applications.

Infra-red spectroscopy: Applications of FTIR in structural determination.

Raman Spectroscopy: Theory, Instrumentation and Applications of Raman Spectroscopy.

Unit II

NMR Spectroscopy

1H NMR: Instrumentation, Magnetic and non-magnetic nuclei, Larmor frequency, absorption of

radiofrequency, chemical shift and its measurement, factors influencing chemical shift,

deshielding, anisotropic effect, spin-spin coupling, factors influencing coupling constant, AB,

AX and ABX systems, simplification of second order spectrum, selective decoupling, NOE

effects, restricted rotation (DMF, DMA), cyclohexane ring inversion, chemical shift reagents for

stereochemical assignments. . 13C NMR: Introduction, chemical shifts, Off-resonance coupled and decoupled spectra. Two

dimensional NMR spectroscopy.

Spectral Interpretation of compounds based on NMR spectroscopy.

UNIT II

Mossbauer spectroscopy

Basic principles, Instrumentation, Selection rules, recoilless emission and absorption, hyperfine

interaction, chemical isomer shift, magnetic hyperfine and quadruple interaction. Application to

Fe and Sn complexes.

Unit IV

Mass Spectrometry

Basic principles, ionization techniques, isotope abundance, molecular ion, fragmentation

processes of organic molecules, McLafferty rearrangement, deduction of structure using mass

spectral fragmentation, FAB-Mass, high resolution MS, soft ionization methods, EI-MS and

MALDI-MS.

Recommended books:

1. Skoog, D. A.; Holler, F. J.; Nieman, T. A. Principles of Instrumental Analysis, 5th Ed.,

Thomson Brooks/Cole, 1998.

Page 28: COURSE STRUCTURE M. Sc. Chemistry

28

2. Strobel, H. A.; Heineman, W. R. Chemical Instrumentation: A Systematic Approach, 3rd

Ed., John Wiley and Sons, 1989.

3. Willard, H. H.; Merritt, Jr., L. L.; Dean, J. A.; Settle, Jr., F. A. Instrumental Methods of

Analysis,7th Ed., Wadsworth, 1988.

4. Rubinson, K. A.; Rubinson, J. F. Contemporary Instrumental Analysis , 1st Ed., Prentice

Hall,2000.

5. Rouessac, F.; Rouessac, A. Chemical Analysis: Modern Instrumentation Methods and

Techniques, 4th Ed., John Wiley and Sons, 1998.

6. Settle, F. A. Handbook of Instrumental Techniques for Analytical Chemistry, 1st Ed.,

Prentice Hall, 1997.

7. Kaur, H. Instrumental Methods of Chemical Analysis, 1st Ed., Pragati Prakashan, 2001.

8. Ewing, G. W. Instrumental Methods of Chemical Analysis, 5th Ed., Mcgraw-Hill, 1985.

9. Banwell, C.N. and McCash, E.L.M.,“Fundamentals of Molecular Spectroscopy”, 4th Ed.

McGraw-Hill N. Y. 1999

10. Slichter, C.P., “ Principles of Magnetic Resonance”, Springer Verlag. 1981

11. Graybeal, J.D., “Molecular Spectroscopy”, McGraw-Hill. 1988

12. Atkins, P. and Paula, J.de, “Physical Chemistry”, 7th Ed., Oxford Univ. Press. 2003

13. Drago, R.S., “Physical Methods in Inorganic Chemistry”, Reinhold Publishing Corp.,

East West Press Ltd.

14. Instrumental Methods of Analysis- Willard, Merrit, Deanand Settle.

15. Spectroscopic Identification of Organic Compounds- R. M. Silverstein and G. C.

Bassler

16. Absorption Spectroscopy of Organic Molecules- V. M. Parikh

17. Applications of Spectroscopic Techniques in Organic Chemistry- P. S. Kalsi

Elective Papers:

MCH -402(01): MEDICINAL CHEMISTRY

Unit I

Introduction to Medicinal Chemistry

Role of Medicinal Chemists, Medicines, Current trends in Drug discovery, Drug Discovery

Pipeline, Clinical trials, Leads and analogues: desirable properties, Sources of leads and drugs.

Procedures followed in drug design, Classification of drugs: on basis of pharmacological

activity, chemical structure, and origin, Methods of administration of drugs.

Unit II

Drug Design and Action

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Development of new drugs, concept of lead, Compound and lead modification, Lipinski rule,

concepts of prodrugs, Drug receptor interactions, PK and PD properties of drugs, and Drug

metabolism, Therapeutic Index, Drug-response relationship (Agonist and Antagonists),

Tachyphylaxis, structure-activity relationship (SAR) factors affecting bioactivity, Isosterism and

bio-isosterism, Drug Designing: Methods of variation, Theories of drug activity (Clark’s

occupancy theory, The Rate theory, The two-state model, Concept of drug receptors elementary

treatment of drug receptor interactions, Receptors, and their properties, types of receptors.

Unit III

Pharmacokinetics and Pharmacodynamics Properties of Drugs

Introduction to drug absorption, distribution, elimination using pharCHokinetics important

pharCHokinetics parameters in defining drug disposition and in therapeutics, drug metabolism,

biotransformation significance of drugs medicinal chemistry.

Unit IV

Synthesis and Action of Drugs

Based on structure or pharCHological basis with examples; Mode of action and synthesis of

cardiac glycosides, local antiinfective drugs, antineoplastic agents, psychoactive drugs,

antibiotics.

Recommended books:

1. Fundamentals in medicinal chemistry- G. Thomas. 2nd edition

2. Introduction to medical Chemistry, G. L. Patrick

3. Medicinal Chemistry- Ashutoshkar

4. Medicinal Chemistry- Sreeram and Yogeshwari

5. Medicinal Chemistry & Drug discovery- Burger (Volume 1-6)

6. Strategies for organic synthesis and Design -D. Lednicer

7. Burger’s Medicinal Chemistry vol. 1to6

MCH -402(02) : POLYMER CHEMISTRY 60hrs

Unit I

Basics of Polymers

Importance of polymers. Basic concepts: Monomers repeat units, degree of polymerization.

Linear, branched and network polymers. Classification of polymers. Step Growth

Polymerization: Theory of reactivity of large monomeric molecules, ring formation vs. chain

formation.

Polymerization: Chain Reaction, Free radical, Cationic, Anionic and living polymers.

Coordination and co-polymerization. Polymerization conditions and polymer reactions.

Unit II

Polymer Characterization

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Polydispersion-average molecular weight concept. Number, weight and viscosity average

molecular weights. Polydispersity and molecular weight distribution. The practical significance

of molecular weight. Measurement of molecular weights. Light scattering, osmotic,

ultracentrifugation viscosity and end group analysis methods.

Unit III

Structure and Properties

Morphology and order in crystalline polymers-configurations of polymer chains. Crystal

structures of polymers. Morphology of crystalline polymers, strain-induced morphology,

crystallization and melting. Polymer structure and physical properties-crystalline melting point

Tm, entropy and heat of fusion. The glass transition temperature, Tg. Relationship between Tm

and Tg, properties requirements and polymer utilization.

Unit IV

Polymer Processing

Processing techniques: Calendering, die casting, rotational casting, film casting, injection

moulding, blow moulding, extrusion moulding,thermoforming, foaming and reinforcing.

Speciality polymers: Fire retarding polymers and electrically conducting polymers.

Biomedical polymers – contact lens, dental, artificial heart, kidney, skin and blood cells

polymers.

Recommended books:

1. Textbook of polymer science, F.W. Billmayer Jr. Wiley

2. Polymer Science, V.R. Gowarikar, N.V. Vishwanathan and J. Shreedhar, Wiley-Eastern

3. Introduction to Polymer Chemistry by Carraher Jr.

4. Functional monomers and polymers, K. Takemoto, Y. Inaki and R.M. Ottanbrite

5. Contemporary polymer chemistry, H. R. Alcock and F.W. Lambe, Pretice Hall

6. Physics and chemistry of polymers, J.M. G. Cowie, Blackie Academic and professional

7. Principles of polymerization,G. Odien, 3rd edition (1991) John-Wiley, Singapore

8. Principles of Polymer Science, P. Bahadur and N. V. Sastry, Narosa Publication House,

New Delhi (220)

MAC-402 (03): Environmental Chemistry 60h

Unit I

Environment

Scope and significance, Chemical and photochemical reactions in the atmosphere, Classification

of environmental pollutants (air, water, noise and soil), sampling, monitoring, Chemical

toxicology: Biochemical effects of metals, Bio-warfare agents.

Unit II

Air and Noise Pollution

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Air pollutants, Green House Effect, carbon dioxide and other Green House gases, control

measures, ozone depletion problem, El Nino phenomenon, Asian brown cloud, acid rain,

particulates, remedial control measures.

Noise classification and noise pollution hazards.

Unit III

Water Pollution

Classification of water pollutants. Wastewater: Constituents, BOD, COD measurements,

municipal waste water, industrial wastewater and storm water, Arsenic contamination in ground

water, Fluorosis, principle of wastewater treatment, treatment processes-physical, chemical and

biological processes.

Unit IV

Solid Wastes

Characterization of solid waste, solid waste disposal and management, recycling, land filling,

Ocean dumping, Sludge treatment, solid waste disposal, Hazardous Wastes: Identifying

hazardous, methods of identification, waste listed as hazardous waste.

Recommended books:

1. Environmental chemistry by A.K. De

2. Rogers Manual of Industrial Chemistry, Vol. 1. Ed. By C. C. Furnas (Nastrand).

3. Outline of Chemical Technology by Dryden (Ed. And revised by Gopal Rao and Sitting)

(Affiliated East-West Press.)

4. Standard Methods for the Examination of water and waste water-American Public Health

Association.

MCH -403 (01): Electrochemistry 60hrs

Unit I

Electrokinetic Phenomenon

Electrokinetic Effects, Electrokinetic potential/Zeta potentials,Determination of zeta potential,

influence of ions on electrokinetic phenomena, Electro-Osmosis, Streaming potential,

Sedimentation potential. Theoretical and quantitative treatment of electrokinetic

phenomena, Electrophonetic Mobility and Bound hydrogen ion.

Unit II

Bio-Electrochemistry

Threshold phenomena, Donnan Membrane Equilibrium, Membrane Potential, Application of

Donnan Membrance Equilibrium, Hodges-Huxely Equation, Core conductor model. Quantum

Aspects of Charge transfer at electrode-solution interfaces, quantization of charge transfer

tunneling. Semiconductor Interfaces: Theory of double layer semiconductor solution interfaces,

Limiting current in semiconductor electrode.

Unit III

Polarography and Voltametry

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Electrode polorization, Theories of overvoltage, Importance of overvoltage, Principle of

polarography, variations of the conventional polarographic methods, Pulse Polarography,

Oscillographic polarography, Tensammetry, AC polarography, square wave polarography,

Anodic stripping and cyclic voltametry, Qualitative and quantitative application of polarography,

Determination of stoichiometry and formation constants of complexes. Amperometric titrations

and advantages.

Unit IV

Solid State Electrochemistry

Solid Fuel Cells and Solid state batteries, General principles of semiconductivity and

semiconductors, Temperature dependence of electrical resistances, Coherent Length,

Piezoelectric effect, Piezoelectric and pyroelectric materials, Conducting polymers,

Fullerenes-Doped conductors. Brief idea of Electrochemistry of molten electrolytes and

nonaqueous solvents.

Recommended Books

1. Meites, L., “Polarographic Techniques”, 3rd Ed., Interscience publishers, N.Y. 1990

2. Lund and Baizer, “Organic Electrochemistry”, Marcel Dekker, New York. 2000

3. Bard, A.J. and Faulkner, L.R., “Electrochemical Methods-Fundamentals and

Applications”, John Wiley. 2000

4. Sane, R.T. and Joshi, A.P., “Electroanalytical Chemistry: Theory and Applications”,

Quest Publications. 1999

5. D. K. Chakrabarty, Adsorption and catalysis by solids, Wiley Eastern, 1990.

6. F. P. Kane and G. B. Larrabee (Eds.), Characterisation of solid surfaces, Plenum, 1978.

7. W. Adamson, Physical Chemistry of Surfaces, 3rd edition, Wiley Interscience, 1976.

8. A. Clark, The Theory of Adsorption and Catalysis, Academic Press, 1970.

9. An Introduction To Electrochemistry : Samuel Glasstone

MAC-403 (02) : Computers in Chemistry 60h

Unit I

Approximate Methods

The variation theorem, linear variation principle. Perturbation theory (first order and non-

degenerate).Applications of variation method and perturbation theory to the Helium atom.

(Ground and excited state)

Hartree-Fock Theory

Introduction to extended Huckel theory, Slater-Condon rules, Hartree-Fock equation, Koopmans

and Brilouintheories, Roothan equation, Gaussian basis sets.

Unit II

Configuration interaction and MC-SCF

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Introduction to CI; full and truncated CI theories, size consistency. Introductory treatment of

coupled cluster and MC-SCF methods.

Unit III

Semi-Empirical Theories

A review of the Huckel, EHT and PPP treatments, ZDO approximation, detailed treatment of

CNDO and INDO theories. A discussion of electronic energies and properties.

Computer experiments using quantum chemistry- software packages such as

GAUSSIAN.GAMESS/ MOPAC/ AM1 and modelling software e.g. MM2/ AMBER/ CHARM.

Unit IV

Density Functional Theory

Derivation of Hohnberg-Kohn theorem, kohn-Sham formulation, N- and V- representabilities,

review of the performance of the existing local (e.g. Slater Xa and other methods) and non-local

functional, treatment of chemical concepts with the density functional theory.

Recommended books:

1. Modern quantum chemistry, N.S. Ostlund and A. Szabo, McGraw Hill

2. Methods of molecular quantum mechanics, R. McWeeny and B. T. Sutclife, Academic

Press

3. Density functional theory of atoms and molecules, R.G. Parr and W. Yang, Oxford

4. Exploring chemistry with electron structure methods, J. B. Foresman and E. Frish,

Gaussian Inc.

5. Semi-empirical MO theory, J. Pople and D. L. Beveridge

6. Modern Quantum Mechanics, Sakurai, J. J., Pearson Education ,1994

MAC-403 (03): Materials Chemistry 60h

Unit I

Inorganic Materials

Design and synthesis of inorganic materials, requirements and constraints, combination

properties of composites, functional materials, active materials; solid state reactions for synthesis

of inorganic materials: ceramic methods, precursor method and sol-gel synthesis, physical and

chemical vapour depositions; carbides, nitrides, structural and functional ceramics,

intermetallics; intrinsic and extrinsic properties: electrical, optical and magnetic properties;

ceramic superconductors, magnetic ceramics, Nanomaterials.

Unit II

Organic Materials

Molecular electronics: molecular materials for electronics and molecular scale electronics:

Molecular properties, molecular arrangement and molecular interactions, piezoelectric and

pyroelectric organic materials; molecular magnets based on transition metal complexes and

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organic ferromagnets, organic non-linear optical materials: photochromic organic materials and

their classes; conducting polymers: polyacetylene, polypyrrole, polyaniline and polythiophene;

conductive change transfer materials: TTFTCNQ, metal–dithiolate systems, fullerenes.

Recommended Books:

1. P.J. Vander Put, Inorganic Chemistry of Materials, Plenum Press, New York, 1998.

2. M.C. Petty, M.R. Bryce and D. Bloor, Editors An Introduction to Molecular Electronics,

Edward Arnold, London 1995.

(Dr. Jawahar Lal) (Dr. Shailesh Kumar)

(Invitee) (Invitee)

(Dr. Jyoti Pandey) (Dr. Anjani Tiwari)

(Invitee) (Invitee)

(Dr. Preeti Gupta) (Prof. Gajanan Pandey)

(Member) (Member)

(Prof. Kuldip Singh Dhindsa) (Prof. Kaman Singh)

(External Member) (Chairman)