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COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING APPLICATIONS FROM INDUSTRY AND BIOINFORMATICS 02/2006 Ing. Alberto Rolo Naranjo [email protected] Higher Institute of Technologies and Applied Sciences InSTEC

COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo [email protected] Flavonoids class of polyphenolic compounds found in several plant species and in

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Page 1: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING

APPLICATIONS FROM

INDUSTRY AND BIOINFORMATICS

02/2006

Ing. Alberto Rolo Naranjo

[email protected]

Higher Institute of Technologies and Applied SciencesInSTEC

Page 2: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Institute Site ( Main CAMPUS)

Ing. Alberto Rolo [email protected]

Page 3: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Research fields

Ing. Alberto Rolo [email protected]

Research fields

Signal Processing (MV-SoftWare-Indust.)

Computational Chemistry

Photodynamic

Theoretical and Applied Physics

Environmental IMPACT, EDUCATION

Recycling, Composting

Page 4: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

SUMMARYIndicators description (Nonlinear Dynamic)

Application to mechanical systems . TEP, NPP

Bioinformatic Application (Biological Systems) .

Flavonoids/Proteins Interacction

Ing. Alberto Rolo [email protected]

Page 5: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Electricity generation in Cuba . Principal Sources

1959 - 397 MWt ���� 56% ���� > 3 000 MWt

Combination of THREE MAJOR PARTS

Combination of THREE MAJOR PARTS

HIGHLY COMPLEX MACHINES ROTORROTORROTOR

SUPPORTING STR.SUPPORTING SUPPORTING STR.STR.

FF-BEARINGSFFFF--BEARINGSBEARINGS

CONDITION MONITORING

SYSTEMS

TURBINES Thermal PS

Page 6: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

CM CM =ΣΣΣΣ

The trend in the Condition Monitoringtrend in the Condition Monitoring is the

combination of different methods.

The principal task of the signal processing is

to extract the maximummaximum amount of the all significant

diagnostic information from the original signalsfrom the original signals

generated by the transducers.

Ing. Alberto Rolo [email protected]

Page 7: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Indicators description (Nonlinear Dynamic)

For CMS sofisticate systems are monted ON LINE:

.... � the diagnostic information

is not enought

Procedure ���� Lineal dynamic ���� FFT

The evolution of Patterns fron linear to nonlinearand the appereance of combined faults

1.Trend Diagrams 2.Waterfall Diagrams.3.Start-up and Shut-Down.4.Orbit Representation.5.Temporal Series6.Spectral analysis.7.Multi-Spectral Comparison.8.Envelope Analysis.9. “Cepstrum” application.10.Full Spectrum

Page 8: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Typical FaultsSPECTRAL ANALYSIS...

Time to Frequency : common used

for a better understanding of time series and for analysis and fault

classification .

Frequency lines = defects ,

common way to fault detection

F=f(t)F=f(t)Faults(f)Faults(f)Loose Stationary

Part Malfunction

Coupling Misalignment

Fluid induced Instabilities

Unbalance

Page 9: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Indicators description (Nonlinear Dynamic)

Chaotic Patterns

The CHAOTIC BEHAVIORCHAOTIC BEHAVIOR of rotor to stator system

Interaction between rotating shaft with its stator and supporting structure.

Divergence from the normal Divergence from the normal Operational ConditionOperational Condition

1.- Looseness in the stationary

joints;

2.-Oversize, poorly lubricated

bearing:

3.-Rubbing rotor:

Physical PhenomenaPhysical Phenomena

1.- System Stiffness f(t)

increase/decrease

2.- Impacts.

3.- Friction

Page 10: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Indicators description (Nonlinear Dynamic)

.... � It is necesary to develop new methodology and descriptors with

high sensitivity .

1. –Estimation = Dificult task (as a function of analized mechanical system)

2. –Automatic determination. (on line processing)

Pseudo-Phase Portrait PPP

1. – Under study.

2. – Limited analysis of the geometrical configuration.

Correlation Dimension D2. (applied to mechanical systems)

Page 11: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Indicators description (Nonlinear Dynamic)

( 1 ){ , , . . . , } ,i i i i mX x x xτ τ+ + −=

Method of Delay [MOD]

First Zero FAC(ττττ )??

Page 12: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Unbalance

Coupling Misalignment

Structural problems

Hydrodynamical faults

PPP asPatterns

Tipical FAULTS vs

2D-PS

Thickn

ess

Page 13: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Indicators description (Nonlinear Dynamic)

D2 = slope of the scaling region C(r,m)

( ) ( )( ),,,)1(

2),(

)(1,

mjxmixrNN

mrCmN

ijjimm

−−Θ−

= ∑>=

-6 -4 -2 0 2

0

5

10

15

LPZ

C(r,m) d[ln(C(r,m))]

d2[ln(C(r,m))]

ln(r)A-AD-QE Method

Page 14: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

[A-AD-QE ] method

APPLICATIONSAPPLICATIONS

Ing. Alberto Rolo [email protected]

Page 15: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

A-AD-QE

Ing. Alberto Rolo [email protected]

Page 16: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

Ing. Alberto Rolo [email protected]

THE PSEUDO-PHASE PORTARIT AND FD APPLIED TO

- Faults identification in Thermoelectrical PP

- Power instability in the N.Reactor

- Internal Vibration of N.Reactor

Page 17: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Data collection system… Turbine

VibroControl 4000

Charge amplifier: B&K 2626

ADConverter

SoftWare VibraMec1024 points

500 Hz1.. 10 Records

Application to mechanical systems . TEP

Ing. Alberto Rolo [email protected]

Page 18: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

Experimental measurements in a Cuban TP

Ing. Alberto Rolo [email protected]

Page 19: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

PPP: Indicator of mechanical Changes

Point: ‘4V’.

State: [13 MWt, 7:32 - 7:38 pm ].

Spectrum evolution : Similar behavior ,

PPP: Show morphological modifications.

Ing. Alberto Rolo [email protected]

Page 20: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

Ing. Alberto Rolo [email protected]

PPP and CD

Page 21: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

Ing. Alberto Rolo [email protected]

PPP vs Total dilatation of a Turbine

Page 22: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

Ing. Alberto Rolo [email protected]

PPP vs Geometrical Configuration

Page 23: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to mechanical systems . TEP

Ing. Alberto Rolo [email protected]

PPP vs Oil temperature

Page 24: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Application to mechanical systems . NPP

Research Reactor (TRIGA MARK III)

BWR

PHWR (Pressurized Heavy Water Reactor)

Identification of instabilities as periodic oscillations

of the neutron flux via instrumentation

Page 25: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Decay ratio (DR) or the main frequency , Both indicators are evaluated by means of ARMA (parametrical modeals)

The main hipotesis : Lineal behavior of the NUCLEAR REACTOR; Nevertheless: nonlinear behavior ,

Ing. Alberto Rolo [email protected]

Application to mechanical systems . NPP

Instability case of the Nuclear Reactor

Page 26: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Research REACTOR-TRIGA MARK-III

Ing. Alberto Rolo [email protected]

PPP configuration and the CD value

Application to mechanical systems . NPP

www.cnsns.gob.mx

Montesino M.E., Rolo N.A ., Azoy C.A. (2003), The attractor dimension determination applied to monitoringand surveillance in Nuclear Power Plants. Progress in Nuclear Energy, Vol. 43, No. 1-4, pp. 389-395.

Page 27: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Ing. Alberto Rolo [email protected]

Limit Cycle corrupted by NOISE

Application to mechanical systems . NPP

Montesino M.E., Rolo N.A ., Azoy C.A. (2003), The attractor dimension determination applied to monitoringand surveillance in Nuclear Power Plants. Progress in Nuclear Energy, Vol. 43, No. 1-4, pp. 389-395.

Cofrentes-Spain www.csn.es

Page 28: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Complex dynamic behaviorInternal Vibration of the Reactor

Ing. Alberto Rolo [email protected]

Application to mechanical systems . NPP

Montesino M.E., Rolo N.A ., Azoy C.A. (2003), The attractor dimension determination applied to monitoringand surveillance in Nuclear Power Plants. Progress in Nuclear Energy, Vol. 43, No. 1-4, pp. 389-395.

Atucha I-Argentinawww.cnea.gov.ar

Page 29: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to biological systems

Ing. Alberto Rolo [email protected]

The Pseudo-Phase Portarit and Fractal Dimension

applied to pattern recognition in biological systems.

its approach to FLAVONOIDS-PROTEINS INTERACTION

Page 30: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to biological systems

Ing. Alberto Rolo [email protected]

Flavonoids

class of polyphenolic compounds found in several plant species and in plant related foods (red wine, tee, olive oils, vegetables, fruits, nuts).

These compounds have evidenced very good health effects during years andtheir interaction with proteins seems to be one of th e most important causes of their bioactivity.

We do not have general patterns We do not have general patterns for the characterization of for the characterization of

FlavonoidsFlavonoids --Proteins Proteins InteractionsInteractions , due to the structural , due to the structural

complexity of complexity of flavonoidsflavonoids

Page 31: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to biological systems

Ing. Alberto Rolo [email protected]

I.- ExplorationExploration (preparation of the data base)

II.- Classification GroupsClassification Groups(Conformation of the Signal according with the

exponential fit.

Y0 = 24,85165, A=0,65219, t=3,78043

REPORT THE AFINITY ORDER OF THE INTERACTION

Page 32: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Application to biological systems . TEP

Ing. Alberto Rolo [email protected]

Page 33: COMPUTATIONAL TOOLS FOR SIGNAL PROCESSING … · Ing. Alberto Rolo Naranjo rolo@fctn.isctn.edu.cu Flavonoids class of polyphenolic compounds found in several plant species and in

Next STEPS

Ing. Alberto Rolo [email protected]

The high sensitivity of the PPP was demonstrated….

- Structural modeling ( PPP����pattern of MV )

- Application of the PPP as a pattern, considering

REAL STRUCTURE of the protein

- Application of MDA (PDB)- RPQ

http://www.mpipks-dresden.mpg.de/~tisean/TISEAN_2.1/docs/chaospaper/node14.html