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Compound and Assay Data Management in the Cloud

Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

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Page 1: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Compound and Assay Data Management in the Cloud

Page 2: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

What is beyond cloud computing?https://www.wired.com/story/its-time-to-think-beyond-cloud-computing/

Page 3: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Solve R&D problems in the cloudhttps://www.wired.com/story/its-time-to-think-beyond-cloud-computing/

Page 4: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Agenda

Csaba PeltzGeneral intro and compound data

Miklós SzabóAssay data capture

Lenka CardovaQuery and reporting

Page 5: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Why cloud?

Page 6: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

1960s – 1980s 1980s – 2000s Now

https://en.wikipedia.org/wiki/IBM_704https://en.wikipedia.org/wiki/HP_9000https://en.wikipedia.org/wiki/Web_server

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Application implementation players: Accenture, Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTecExpect to see more here

R&D IT is at the entry point in adopting large - scale use of cloud- based platforms in enterprise computing

Page 8: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
Page 9: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
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ELN,Inv.

Plexus Connect

3rd party ELN, inventory

ChemAxon Assay

Compound Registration

Compliance Checker

ChemLocator

MadFast Search

Marvin Live

Page 12: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
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Register chemical data

Search and report your data

Page 15: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Register chemical data

Upload processed assay data

Search and report your data

Page 16: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Register chemical data

Upload processed assay data

Search and report your data

Page 17: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
Page 18: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Register chemical data

Upload processed assay data

Search and report your data

Page 19: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
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Page 22: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

We would like FULL CONTROL over the upload

Interactive upload

Page 23: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Fill in the spreadsheet file

Biedermann et al, J. Nat. Prod., 2016, 79 (12), pp 3086– 3092Horký et al, European J. of Med. Chemistry 2018 143 843-853

Interactive upload

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Upload taskInteractive upload

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Task detailsInteractive upload

Page 26: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Cross-check IDs in Compound Reg.Interactive upload

Page 27: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

MappingInteractive upload

RPE-1.5PCurveFit.IC50

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Confirm and SaveInteractive upload

Page 29: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

We would like it QUICKER

Semi-auto upload

Page 30: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Template for a semi-auto uploadSemi-auto upload

Page 31: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Semi-auto upload

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We would like to upload MULTIPLE FILES, AUTOMATICALLY

Automatic upload

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Deploy files to a folder ...Automatic upload

Page 34: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

… and upload them even quickerAutomatic upload

Automatic upload

Page 35: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Uploaded by a schedulerAutomatic upload

Page 36: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Admin Area - Data Synchronization

Page 37: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Admin Area - Roles

Page 38: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Search and report your data

Page 39: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
Page 40: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is
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Page 42: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Search and report

Reporting Workflow

Search, Filter & Analyse

Create your workspace Save &

SharePrint & Export

Page 43: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

This can be your workspace

Page 44: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Conditional formatting

Page 45: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Calculators

Page 46: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Form views

Page 47: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Data synchronization

Page 48: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

External links

Page 49: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Shareable url

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PDF reports and export

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PDF reports and export

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Card views

Page 53: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

This can be your workspace too

Page 54: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Curve fitting

Page 55: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Charts & data synchronization

Page 56: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Point density

Page 57: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Point density

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Continuous & categorical coloring

Page 59: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Adjust axes

Page 60: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Structures (R-groups) on axes

Page 61: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

Find them …

Mate Csonka Lukas Marek

Page 62: Compound and Assay Data Management in the Cloud€¦ · Cloud Biopharmaceuticals, Dassault, IBM, SAS Institute, Tata Consultancy and Wuxi AppTec Expect to see more here R&D IT is

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