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Methods
Introduction
The accurate detection and diagnose of
Alzheimer’s disease (AD) is quite challenge. It
is generally accepted that sensitive
biomarkers derived from in vivo neuroimaging
data could improve the early identification of
AD. In this study, we employed a
morphometric analysis in the hippocampus
and lateral ventricle. We applied our brain
surface morphometry pipeline to analyze brain
MRIs obtained from the well-characterized
Arizona APOE cohort of presymptomatic
individuals. We hypothesized that our surface
multivariate statistics may identify subtle
shape difference on both hippocampus and
lateral ventricle. The results showed
significant regional differences between stable
and declining participants. Our results may
help improve the sensitivity and accuracy of
hippocampal and ventricular morphometry for
preclinical AD research.
Cognitive Decline Affects The Morphometric Properties Of Hippocampus And Lateral Ventricle
Wen Zhang1, Jie Shi1, Cynthia Stonnington2, Robert J. Bauer III3, Boris A. Gutman4, Kewei Chen3, Paul M. Thompson4, Eric M. Reiman3, Richard J. Caselli5, Yalin Wang1
1School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, USA. 2Dept. of Psychiatry and Psychology, Mayo Clinic Arizona, Scottsdale,AZ. 3Banner Alzheimer’s Institute, Phoenix, AZ, USA. 4Imaging Genetics Center, Institute for Neuroimaging and Informatics, University of Southern California, Marina del Rey, CA.5Department of Neurology, Mayo Clinic Arizona, Scottsdale, AZ, USA .
References1. M. Jenkinson, et al., “FSL,” Neuroimage, vol. 62, no. 2, pp. 782–790, Aug
2012.
2. Zhang W, et al., "Morphometric Analysis of Hippocampus and Lateral Ventricle
Reveals Regional Difference Between Cognitively Stable and Declining
Persons", ISBI. 2016
3. Wang, Y. et al, 2011. Surface-based TBM Boosts Power to Detect Disease
Effects on the Brain: An N=804 ADNI Study. NeuroImage, 56(4):1993-2010.
4. Reiman, E.M., Linking brain imaging and genomics in the study of Alzheimer's
disease and aging. Ann NY Acad Sci, 2007. 1097: p. 94-113.
Methods
1. Segmentation of Hippocampus and Lateral Ventricle. The hippocampus was
segmented from T1 images by using FSL software package [1]. For ventricular
segmentation, in this research, we used a novel pipeline that computed a group-wised
ventricular template and used it to accurately segment continuous ventricular structures [2].
2. Surface Multivariate Tensor-based Morphometry. Based on segmented binary
volume masks, we extracted hippocampal and ventricular boundaries with a topology
preserving level-set method and constructed triangular surface meshes with marching
cubes algorithm. Later, the surfaces were further smoothed using a two step mesh
smoothing method, ”progressive meshes'' and Loop subdivision, which has been proved to
be feature-preserving meanwhile effectively reduce the noise and partial volume effect.
Figure 2 illustrates the reconstructed surface samples of our method.
3. Group Difference Study. The Hotellling's T2 test was performed to evaluate the
morphometric variations of hippocampal and ventricular surfaces between declining
controls and stable control group on each vertex [3].
DiscussionIn this study, we identified that strong difference on
the left sides of both hippocampus and lateral
ventricle. It may suggest that the cognitive decline
related to brain atrophy started from left side and
subsequently extend to the right. Overall, the
experimental results showed a strong indication that
hippocampal and ventricular morphometry may be
useful as imaging biomarkers to predict impending
cognitive decline in asymptomatic, cognitively
unimpaired subjects.
Experiments
Figure 2. Illustration of the
reconstruction samples of
this experiment. We
overlaid the segmented
ventricular and hippocam-
pal volume masks on the
original T1 image and
showed the surface
reconstruction meshes
based on the volume
masks. L stands for the left
side and R means the right
side.
We computed the surface morphometric difference of hippocampus and lateral ventricle
between stable and declining individuals. 18 subjects with presymptomatic imaging studies
developed to aMCI or AD on average of 2 years, after their last imaging visits. 35 subjects
matched for sex and age who remained cognitively unimpaired for at least 4 years were
selected as the comparison, stable group. Their baseline high-resolution T1 MRI scans were
used in this study [4]. We used the Mahalanobis distance to measure the difference between
the mean morphometry feature vectors between these two groups. P-map computed by
Hotelling's T2 test were shown in Figure 3. The statistical results were corrected for multiple
comparisons with permutation test. With p<0.05 as the threshold, the global significance
levels on hippocampus and lateral ventricle reached the significant level on both sides
(hippocampus, left p=0.0135, right p=0.0367; ventricle, left p=0.0131, right p=0.0461).
Figure 3. Statistical Result of Group Difference on
Hippocampus and Lateral Ventricle. The middle
color bar indicated the range of p values. L stands
for the left side while R means the right side.
AcknowledgementThis research was supported by NIH (R21AG043760,
R21AG049216, R01AG031581, P30AG19610, U54 EB020403), NSF
(DMS-1413417 and IIS-1421165).
Figure 1. Ventricle Segmentation Pipeline.
The order of processing is followed by A-B-
C-D.