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Chatila-Bry Sample August 15, 2012 Hao Zheng, Petrosino Lab [email protected] Molecular Virology & Microbiology Baylor College of Medicine

Chatila-Bry Sample

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Chatila-Bry Sample. August 15, 2012 Hao Zheng , Petrosino Lab [email protected] Molecular Virology & Microbiology Baylor College of Medicine. Analysis Specifics. Mothur , CloVR , in-house scripts 19 samples Normalization to 3,507 reads/sample. Alpha Diversity-Rarefaction Curves. - PowerPoint PPT Presentation

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Page 1: Chatila-Bry  Sample

Chatila-Bry Sample

August 15, 2012Hao Zheng, Petrosino Lab

[email protected] Molecular Virology & Microbiology

Baylor College of Medicine

Page 2: Chatila-Bry  Sample

Analysis Specifics

• Mothur, CloVR, in-house scripts• 19 samples• Normalization to 3,507 reads/sample

Page 3: Chatila-Bry  Sample

Alpha Diversity-Rarefaction Curves

Page 4: Chatila-Bry  Sample

Beta Diversity-PCoA Plots

Page 5: Chatila-Bry  Sample

Mean Relative Abundance of Phyla

Page 6: Chatila-Bry  Sample

Mean Relative Abundance of Phyla

Page 7: Chatila-Bry  Sample

Mean Relative Abundance of Class

Page 8: Chatila-Bry  Sample

Mean Relative Abundance of Class

Page 9: Chatila-Bry  Sample

Mean Relative Abundance of Genus

Page 10: Chatila-Bry  Sample

Mean Relative Abundance of Genus

Page 11: Chatila-Bry  Sample

Taxonomy-based sample clustering

Page 12: Chatila-Bry  Sample

Analysis Result Path

/stornext/snfs3/cmmr/Share/ChatilaBry/Processing