1
Median Age (IQR) 66 (50,78) Female 63% Patient Characteristics Hospitalized 65% Median Hosp Days (IQR) 9.5 (5,24) Clinic 23% ED/Urgent Care 8% LTAC 4% Location at time of culture 54% Positive 21% Negative 25% Not tested or unknown Modified-Hodge Test 6% KPC+ 84% Negative 17% Not Tested Carbapenemase PCR Testing* RESULTS Characteristics of Carbapenem-Resistant Enterobacteriaceae (CRE)-Positive Patients in Oregon Andrew J. Leitz, MD 1 , Margaret C. Cunningham, MPH 2 , Tasha Poissant, MPH 2 , Ann Thomas, MD, MPH 2 , John M. Townes, MD 1 , Jon P. Furuno, PhD 1,3 , Zintars G. Beldavs, MS 2 and Christopher D. Pfeiffer, MD, MHS 1,4 1 Oregon Health & Science University, Portland, OR, 2 Oregon Health Authority, Portland, OR, 3 Oregon State University, Portland, OR, 4 Portland VA Medical Center, Portland, OR ABSTRACT Background: Carbapenem-resistant Enterobacteriaceae (CRE) are an emerging public health problem. This review was performed to better understand statewide CRE epidemiology and characteristics of CRE-positive patients. Methods: Mandatory reporting of CRE in Oregon began in December 2011. We reviewed medical records of all patients with CRE-positive cultures reported to the Oregon Health Authority through March 2013. Patient demographics and risk factors for CRE were analyzed. Carbapenemase production was assessed via Modified Hodge Test (MHT) and PCR for Klebsiella pneumoniae carbapenemase (KPC) and New Delhi metallo-beta-lactamase (NDM). Results: CRE were reported in 48 patients; median age was 66 (IQR 48, 76) and the majority were female (n=31; 63%). Most patients (n=31; 65%) were hospitalized at the time cultures were obtained; other healthcare settings from which CRE were isolated included outpatient clinics (n=11; 23%), emergency departments or urgent care (n=4; 8%), and long-term care facilities (n=2; 4%). Culture site and results of carbapenemase testing arranged by species are summarized in the Results section. PCR testing for NDM was negative in all tested isolates. The three patients harboring KPCs were not epidemiologically linked, and each had received recent healthcare outside Oregon. CONCLUSIONS CRE cases are infrequently reported in Oregon • Only 3 CP-CRE cases have been reported to date Most isolates from reported cases were Enterobacter spp obtained from urinary tract samples All CP-CRE were KPC-producing Klebsiella pneumoniae in patients recently receiving care outside of Oregon No epidemiological link between the CP-CRE cases was identified The paucity of reported carbapenemase-producing CRE indicates that the transmission of CP-CRE in Oregon is not yet widespread. This presents a unique opportunity for a coordinated regional approach to rapidly detect and prevent the spread of CRE in Oregon. Background RESULTS Clatsop Tillamook Columbia Lincoln Yamhill Washington Multnomah Clackamas Polk Marion Benton Linn Lane Coos Douglas Curry Josephine Jackson Klamath Hood River Wasco Sherman Jefferson Gilliam Wheeler Morrow Umatilla Union Willowa Deschutes Crook Lake Grant Harney Malheur Baker 1 5 1 2 2 1 4 2 1 3 1 1 9 6 1 1 2 1 <49,999 50,000 to 99,999 100,000 to 199,999 200,000 to 449,999 > 450,000 County Population Carbapenemase-positive (CP-CRE) cases n n= CRE cases FUTURE WORK Acknowledgements and References •Special thanks to Maureen Cassidy for assistance with case report database References : Gupta N, Limbago BM, Patel JB, Kallen AJ. Carbapenem-resistant Enterobacteriaceae: epidemiology and prevention. Clin Infect Dis. 2011;53(1):60-67. Nordmann P, Naas T, Poirel L. Global spread of Carbapenemase-producing Enterobacteriaceae. Emerg Infect Dis. 2011;17(10):1791-1798 Centers for Disease Control andPrevention. Vital signs: carbapenem-resistant Enterobacteriaceae. MMWR Morb Mortal Wkly Rep. 2013;62(9):165-170 Won SY, Munoz-Price LS, Lolans K, et al. Emergence and rapid regional spread of Klebsiella pneumoniae carbapenemase-producing Enterobacteriaceae. Clin Infect Dis. 2011;53(6):532-540. Oregon Health Authority. Guidance for Control of Carbapenem-resistant Enterobacteriaceae (CRE): 2013 Oregon Toolkit. http://public.health.oregon.gov/DiseasesConditions/DiseasesAZ/CRE. Accessed Sept 12, 2013. Continue statewide surveillance and analyze epidemiological and microbiological data to identify a more specific case definition targeting CP-CRE and risk factors for non-CP-CRE develop criteria for colonization versus infection and associated mortality data complete a local point-prevalence study to more accurately measure prevalence of CRE CRE: Enterobacteriaceae that meet any of the following criteria: Are non-susceptible (intermediate or resistant) to ANY carbapenem (doripenem, ertapenem, imipenem, meropenem) AND resistant to ANY of the following 3rd generation cephalosporins tested (cefotaxime, ceftriaxone, or ceftazidime) Possess/contain a gene sequence specific for carbapenemase (PCR) Are positive for carbapenemase production by a phenotypic test (e.g., Modified Hodge Test) CP-CRE: Carbapenemase-producing CRE DROP-CRE Network: Drug-Resistant Organism Prevention and Coordinated Regional Epidemiology Network: A multi-disciplinary advisory committee consisting of representatives from academic institutions and public health, convened to assist with planning and implementation of CRE epidemiology and control efforts Methods: All isolates reviewed were from clinically obtained samples. No active surveillance was undertaken except for in the case of KPC isolate #1 where patients in the same ward were screened. Susceptibility interpretation was obtained from reporting laboratories using the CLSI breakpoints in place at each lab at the time of reporting. Specimen Type 54% Enterobacter cloacae 19% Klebsiella pneumoniae 15% Enterobacter aerogenes 4% Escherichia coli Enterobacter asburiae 2% Serratia marcescens 2% Proteus mirabilis 2% Citrobacter spp 2% Species Isolated 75% urine 11% blood 8% wound 6% sputum Carbapenemase-positive Patients (n=3) Three isolates had positive PCR carbapenemase tests All three isolates were Klebsiella pneumoniae harboring KPCs NDM-1 was not isolated in any samples no epidemiological link was found between these three patients Antimicrobial Susceptibility resistant sensitive intermediate Not tested/unknown ERT MER IMI DOR CTX CTZ CFP CIP GNT T/S Isolate 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 Enterobacter cloacae Isolate 1 2 3 4 5 6 7 Enterobacter aerogenes ERT MER IMI DOR CTX CTZ CFP CIP GNT T/S 1 2 3 4 5 6 7 8 9 Isolate Klebsiella pneumonaie Escherichia coli Escherichia coli Proteus mirabilis Citrobacter spp Enterobacter asburiae Serratia marcescens Other species ERT: ertapenem MER: meropenem IMI: imipenem/cilastatin DOR: doripenem CTX: ceftriaxone CTZ: ceftazidime CFP: cefepime CIP: ciprofloxacin GNT: gentamicin T/S: trimethoprim/sulfmethoxazole Sensitivities were interpreted by the reporting laboratory using the CLSI break-points in use at the reporting laboratory at time of testing ERT MER IMI DOR CTX CTZ CFP CIP GNT T/S 1 2 3 sputum blood + wound urine Klebsiella pneumoniae Klebsiella pneumoniae Klebsiella pneumoniae Isolate Source Species Recent Healthcare VA OH and PA CA and AZ *PCR testing for KPC and NDM-1 plasmids only

Characteristics of CRE-Postive Patients in Oregon · breakpoints in place at each lab at the time of reporting. Specimen Type 54% Enterobacter cloacae 19% Klebsiella pneumoniae 15%

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Page 1: Characteristics of CRE-Postive Patients in Oregon · breakpoints in place at each lab at the time of reporting. Specimen Type 54% Enterobacter cloacae 19% Klebsiella pneumoniae 15%

Median Age (IQR) 66 (50,78)Female 63%

Patient CharacteristicsHospitalized 65%

Median Hosp Days (IQR) 9.5 (5,24)Clinic 23%ED/Urgent Care 8%LTAC 4%

Location at time of culture

54%Positive

21%Negative

25%Not testedor unknown

Modified-Hodge Test

6%KPC+

84%Negative

17%Not Tested

Carbapenemase PCR Testing*

RESULTS

Characteristics of Carbapenem-Resistant Enterobacteriaceae (CRE)-Positive Patients in OregonAndrew J. Leitz, MD 1, Margaret C. Cunningham, MPH 2, Tasha Poissant, MPH2, Ann Thomas, MD, MPH 2, John M. Townes, MD 1, Jon P. Furuno, PhD1,3 , Zintars G. Beldavs, MS 2 and Christopher D. Pfeiffer, MD, MHS 1,4

1Oregon Health & Science University, Portland, OR, 2Oregon Health Authority, Portland, OR, 3Oregon State University, Portland, OR, 4Portland VA Medical Center, Portland, OR

ABSTRACT

Background:Carbapenem-resistant Enterobacteriaceae (CRE) are an emerging public healthproblem. This review was performed to better understand statewide CREepidemiology and characteristics of CRE-positive patients.

Methods:Mandatory reporting of CRE in Oregon began in December 2011. We reviewedmedical records of all patients with CRE-positive cultures reported to theOregon Health Authority through March 2013. Patient demographics and riskfactors for CRE were analyzed. Carbapenemase production was assessed viaModified Hodge Test (MHT) and PCR for Klebsiella pneumoniae carbapenemase(KPC) and New Delhi metallo-beta-lactamase (NDM).

Results:CRE were reported in 48 patients; median age was 66 (IQR 48, 76) and themajority were female (n=31; 63%). Most patients (n=31; 65%) werehospitalized at the time cultures were obtained; other healthcare settingsfrom which CRE were isolated included outpatient clinics (n=11; 23%),emergency departments or urgent care (n=4; 8%), and long-term carefacilities (n=2; 4%). Culture site and results of carbapenemase testingarranged by species are summarized in the Results section. PCR testing forNDM was negative in all tested isolates. The three patients harboring KPCswere not epidemiologically linked, and each had received recent healthcareoutside Oregon.

CONCLUSIONS

• CRE cases are infrequently reported in Oregon

• Only 3 CP-CRE cases have been reported to date

• Most isolates from reported cases were Enterobacter spp obtained fromurinary tract samples

• All CP-CRE were KPC-producing Klebsiella pneumoniae in patients recentlyreceiving care outside of Oregon

• No epidemiological link between the CP-CRE cases was identified

The paucity of reported carbapenemase-producing CRE indicates that thetransmission of CP-CRE in Oregon is not yet widespread. This presents aunique opportunity for a coordinated regional approach to rapidly detectand prevent the spread of CRE in Oregon.

Background

RESULTS

Clatsop

Tillamook

Columbia

Lincoln

Yamhill

Washington Multnomah

Clackamas

Polk Marion

BentonLinn

Lane

Coos Douglas

Curry

JosephineJackson

Klamath

HoodRiver

Wasco

Sherman

Jefferson

Gilliam

Wheeler

Morrow

Umatilla

Union

Willowa

Deschutes

Crook

Lake

Grant

HarneyMalheur

Baker

1

5

1 2

2

1

4

21

3

11

9

6

1

1

2

1

<49,99950,000 to 99,999

100,000 to 199,999200,000 to 449,999

> 450,000

County Population

Carbapenemase-positive(CP-CRE) cases

nn= CRE cases

FUTURE WORK

Acknowledgements and References

•Special thanks to Maureen Cassidy for assistance with case report database

References:

Gupta N, Limbago BM, Patel JB, Kallen AJ. Carbapenem-resistant Enterobacteriaceae: epidemiology and prevention. Clin Infect Dis.2011;53(1):60-67.Nordmann P, Naas T, Poirel L. Global spread of Carbapenemase-producing Enterobacteriaceae. Emerg Infect Dis. 2011;17(10):1791-1798Centers for Disease Control andPrevention. Vital signs: carbapenem-resistant Enterobacteriaceae. MMWR Morb Mortal Wkly Rep.2013;62(9):165-170Won SY, Munoz-Price LS, Lolans K, et al. Emergence and rapid regional spread of Klebsiella pneumoniae carbapenemase-producingEnterobacteriaceae. Clin Infect Dis. 2011;53(6):532-540.Oregon Health Authority. Guidance for Control of Carbapenem-resistant Enterobacteriaceae (CRE): 2013 Oregon Toolkit.http://public.health.oregon.gov/DiseasesConditions/DiseasesAZ/CRE. Accessed Sept 12, 2013.

• Continue statewide surveillance and analyze epidemiological andmicrobiological data to identify a more specific case definitiontargeting CP-CRE and risk factors for non-CP-CRE

• develop criteria for colonization versus infection and associatedmortality data

• complete a local point-prevalence study to more accurately measureprevalence of CRE

CRE: Enterobacteriaceae that meet any of the following criteria:• Are non-susceptible (intermediate or resistant) to ANY carbapenem (doripenem,

ertapenem, imipenem, meropenem)ANDresistant to ANY of the following 3rd generation cephalosporins tested (cefotaxime,ceftriaxone, or ceftazidime)

• Possess/contain a gene sequence specific for carbapenemase (PCR)• Are positive for carbapenemase production by a phenotypic test (e.g., Modified Hodge

Test)

CP-CRE: Carbapenemase-producing CRE

DROP-CRE Network: Drug-Resistant Organism Prevention and Coordinated Regional Epidemiology Network:A multi-disciplinary advisory committee consisting of representatives from academicinstitutions and public health, convened to assist with planning and implementation of CREepidemiology and control efforts

Methods: All isolates reviewed were from clinically obtained samples. No active surveillancewas undertaken except for in the case of KPC isolate #1 where patients in the same ward werescreened. Susceptibility interpretation was obtained from reporting laboratories using the CLSIbreakpoints in place at each lab at the time of reporting.

Specimen Type

54%Enterobacter cloacae

19%Klebsiella

pneumoniae

15%Enterobacter

aerogenes

4% Escherichia coli

Enterobacter asburiae 2%Serratia marcescens 2%Proteus mirabilis 2%Citrobacter spp 2%

Species Isolated

75%urine

11%blood

8%wound 6%

sputum Carbapenemase-positive Patients (n=3)• Three isolates had positive PCR carbapenemase tests

• All three isolates were Klebsiella pneumoniae harboring KPCs

• NDM-1 was not isolated in any samples

• no epidemiological link was found between these three patients

Antimicrobial Susceptibility

resistant

sensitiveintermediate

Not tested/unknown

ER

TM

ER

IMI

DO

RC

TX

CT

ZC

FP

CIP

GN

TT

/SIsolate

123456789

1011121314151617181920212223242526

Enterobacter cloacae

Isolate

1234567

Enterobacter aerogenes

ER

TM

ER

IMI

DO

RC

TX

CT

ZC

FP

CIP

GN

TT

/S

123456789

Isolate

Klebsiella pneumonaie

Escherichia coliEscherichia coliProteus mirabilisCitrobacter sppEnterobacter asburiaeSerratia marcescens

Other species

ERT: ertapenemMER: meropenemIMI: imipenem/cilastatinDOR: doripenemCTX: ceftriaxone

CTZ: ceftazidimeCFP: cefepimeCIP: ciprofloxacinGNT: gentamicinT/S: trimethoprim/sulfmethoxazole

Sensitivities were interpreted by the reporting laboratory using the CLSI break-points in useat the reporting laboratory at time of testing

ER

TM

ER

IMI

DO

RC

TX

CT

ZC

FP

CIP

GN

TT

/S

123

sputum

blood + wound

urine

Klebsiella pneumoniae

Klebsiella pneumoniae

Klebsiella pneumoniae

Isolate Source SpeciesRecent

Healthcare

VA

OH and PA

CA and AZ

*PCR testing for KPC and NDM-1 plasmids only